Rh5CG309700

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
34200376 .. 34203580
3205 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG309700.1

Sequence Viewer

Length: 2082 bp
ATGGCTGTCATTAACAATTGTGGCAATGGGATCATGACACAGCTTCATGAGTATTCACTAAAGCAGCTTCAATTCCTTTTTCTTCTCTTCTTTCTGGTAACCCCTTCTGCAACCTCTATAACCTTCAATCTCTCGAGCTTTTCCGGTGCAGACTCTATAATAACCGAGCAAGATGCTACTATCGACAAGCAAGTCCTCCGACTCACCAATAGTGCTGTAGATGAATCACAGGCGCAAAGCGTCGGCCGAGCCACTTGGCAAGAACCCTTCCTCCTCCGCGAAATTGCCACCGGAAAGCTCGCTGATTTTACAACACATTTCACCTTTGTCATCGATTCTCTACGGGAAACCGACTATGCAGACGGGCTAGTGTTCTTCATAGCGCCAAACGGATCCTTACTCAACACATCCCTCGGAGGAGGAGGAGGTGCCCTCGGCCTCCCTGTGGAAAACACGGCAGGAAATATTGGGTACAACTTTGTTGCGGTGGAGTTTGATATCTTCCAGAATACTCAAACATTCGTTGACGATCCCACCGGCAACCATGTGGGTATCGACGTCAACTCTCTCAAGTCCTTGAACACCAAGCCTTGGAATGGTAATATTACATATGGACAACACAATAGTGCTACGGTTAGTTACAATTCCAGCACAAAAAATCTTAGCGTTGCCTTCACTACTTTTGTTAACGGTACCCAACAGATGGACTATCTTTCTGACCAAGTTGATCTGATAGAGTACTTGCCCGACATGGTCATTGTCGGTTTCTCTGCTGCGACGGGGGATAAGTTTGCTGTGCACAAGATCCTCTCGTGGAATTTTACTTCTACTAACCTGACTATCCCAGGAGATGGGGTGATCCCAGGAAATGGGGTGAGTGTAGCACTAGTCGTTGGGTTGAGCATTGGTGGATTCATTATCTTGGTTGGTGGGTTGACATTGGTTTGGTTCATCTTTTGGAAGAAGAGGGAAGGAGGGGAAAGTGATGCTGAAGATCCCATGGTACTTGATGACGAATTTGAAAAGGGGACAGGCCCTAGGAAGTTTTCGTACAGCGAGTTGGCTCGAGCAACAAATAATTTTGTAGAGGGAGAGAAGCTTGGAGAGGGAGGTTTTGGTGGGGTTTATAGAGGCTTCATAAAAGACTTGAACTCATATGTTGCTGTTAAGAGGGTATCCAAGGGGTCTAAGCAAGGACTAAAGGAGTATGCATCGGAAGTAAGGATCATCAGTCGGCTAAGGCATCGAAATCTGGTGCAACTAATTGGTTGGTGCCATGAAAAAGGTGAGCTCCTACTTGTCTATGAGTACATGCCCAACGGTAGTTTAGATTCCCATCTATTCAAATTAAAAAGCTTGTTAAGTTGGAGGGTAAGATACAAGATTGCTCAAGGGTTGGCCTCTGGCTTATTTTACCTGCACGAAGAATGGGAACAATGTGTTTTGCACAGGGATATCAAATCCAGCAACATTATGTTGGATTCAAACTTCAATGTGAAACTTGGGGATTTCGGGCTAGCTCGACTTGTGGACCATGGAAAACAGTCGGAAACAACAATTGTAGCTGGAACCAGAGGCTACATGGCTCTGGAATATGTTACCACAGGAAAGGCTAGCAAGGAATCGGATGTTTATAGCTTCGGAGTTGTTGCTTTGGAAATAGCCTGCGGAAGGAAACCTATTGATCTTACGTTGATAAGTACTCAAATAAATATGGTGCAGTGGGTTTGGGAGCTTTATGGAGAAGGGAAAGTCATTGAAGCCGCCGATCCTGTACTTTCAGGAGATTTTGATGAGAAACAAATGGAGTGCTTGATGATCGTTGGGTTATGGTGTGCTCATCCGGATTACAGTATGAGGCCTTCAATACAACAAGCAATTCAGGTGCTTAACTTCGAAGTTCCATTGCCTAGTCTACCACCACATATGCCGATGGCCACCTTTCCTCCTCCAATATCATTATCCACGTTGTCTGGTTATACCACCAGCTCTGTAGGAGGGCAAACTGAGTCATCAGGCAACGGTTATACCACCAATTCCTCACAGTTCACAACATCTTCTGCAACAGCATCACTTCTGTAA

Protein Analysis

693

Amino Acids

75.79

Weight (kDa)

5.1

Isoelectric Point (pI)

26.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 40 - 278 2.2e-60 Legume lectin domain
Pkinase PF00069 362 - 628 4.7e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 364 - 562 3.6e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 191
AatII GACGTC 1 cut(s) 561
Acc36I ACCTGC 1 cut(s) 1425
Acc65I GGTACC 1 cut(s) 692
AccB1I GGYRCC 3 cut(s) 428, 692, 1272
AccB7I CCANNNNNTGG 4 cut(s) 591, 703, 851, 869
AccI GTMKAC 1 cut(s) 1915
AccII CGCG 1 cut(s) 279
AccIII TCCGGA 1 cut(s) 1843
AciI CCGC 4 cut(s) 277, 485, 1668, 1764
AclWI GGATC 9 cut(s) 38, 387, 400, 524, 799, 853, 989, 1232, 1763
AcoI YGGCCR 2 cut(s) 244, 1935
AcsI RAATTY 2 cut(s) 817, 1016
AcuI CTGAAG 1 cut(s) 1011
AcyI GRCGYC 1 cut(s) 558
AfaI GTAC 8 cut(s) 473, 694, 740, 1005, 1052, 1310, 1702, 1776
AfiI CCNNNNNNNGG 7 cut(s) 445, 591, 596, 703, 851, 869, 1671
AhlI ACTAGT 1 cut(s) 886
AjnI CCWGG 2 cut(s) 844, 862
AleI CACNNNNGTG 1 cut(s) 624
AloI GAACNNNNNNTCC 2 cut(s) 255, 287
Alw21I GWGCWC 3 cut(s) 801, 1293, 1840
Alw44I GTGCAC 1 cut(s) 797
AlwI GGATC 9 cut(s) 38, 387, 400, 524, 799, 853, 989, 1232, 1763
Ama87I CYCGRG 2 cut(s) 133, 1065
Aor13HI TCCGGA 1 cut(s) 1843
AoxI GGCC 6 cut(s) 244, 436, 1033, 1398, 1859, 1935
ApaLI GTGCAC 1 cut(s) 797
ApeKI GCWGC 2 cut(s) 64, 773
ApoI RAATTY 2 cut(s) 817, 1016
Asp718I GGTACC 1 cut(s) 692
AspA2I CCTAGG 1 cut(s) 1037
AspLEI GCGC 2 cut(s) 235, 385
AspS9I GGNCC 2 cut(s) 1034, 1531
AsuHPI GGTGA 5 cut(s) 196, 313, 868, 886, 1298
AsuII TTCGAA 1 cut(s) 1896
AsuNHI GCTAGC 2 cut(s) 1516, 1613
AvaI CYCGRG 2 cut(s) 133, 1065
AvaII GGWCC 1 cut(s) 1531
AvrII CCTAGG 1 cut(s) 1037
BaeGI GKGCMC 2 cut(s) 433, 801
BalI TGGCCA 1 cut(s) 1937
BamHI GGATCC 1 cut(s) 392
BanI GGYRCC 3 cut(s) 428, 692, 1272
BanII GRGCYC 1 cut(s) 1293
BarI GAAGNNNNNNTAC 4 cut(s) 1034, 1066, 1846, 1878
BauI CACGAG 1 cut(s) 811
Bbv12I GWGCWC 3 cut(s) 801, 1293, 1840
BbvI GCAGC 2 cut(s) 76, 760
BccI CCATC 4 cut(s) 697, 845, 1344, 1927
BceAI ACGGC 1 cut(s) 471
BcgI CGANNNNNNTGC 2 cut(s) 155, 189
BciT130I CCWGG 2 cut(s) 846, 864
BciVI GTATCC 1 cut(s) 1186
BcuI ACTAGT 1 cut(s) 886
BfaI CTAG 6 cut(s) 368, 887, 1038, 1517, 1614, 1911
BfmI CTRYAG 2 cut(s) 216, 1992
BfoI RGCGCY 1 cut(s) 386
BfuAI ACCTGC 1 cut(s) 1425
BfuI GTATCC 1 cut(s) 1186
BisI GCNGC 3 cut(s) 65, 774, 1764
BlnI CCTAGG 1 cut(s) 1037
BlsI GCNGC 3 cut(s) 66, 775, 1765
BmcAI AGTACT 2 cut(s) 740, 1702
Bme1390I CCNGG 2 cut(s) 846, 864
Bme18I GGWCC 1 cut(s) 1531
BmeT110I CYCGRG 2 cut(s) 133, 1065
BmgT120I GGNCC 2 cut(s) 1034, 1531
BmiI GGNNCC 5 cut(s) 394, 430, 694, 1274, 1570
BmrFI CCNGG 2 cut(s) 846, 864
BmsI GCATC 5 cut(s) 163, 976, 1220, 1252, 2078
BmtI GCTAGC 2 cut(s) 1520, 1617
BplI GAGNNNNNCTC 2 cut(s) 417, 449
Bpu10I CCTNAGC 1 cut(s) 1238
Bpu14I TTCGAA 1 cut(s) 1896
BpuEI CTTGAG 2 cut(s) 554, 1374
Bsa29I ATCGAT 1 cut(s) 333
BsaBI GATNNNNATC 1 cut(s) 1335
BsaHI GRCGYC 1 cut(s) 558
BsaJI CCNNGG 9 cut(s) 412, 433, 590, 844, 862, 999, 1037, 1179, 1534
BsaWI WCCGGW 3 cut(s) 143, 290, 1843
BsaXI ACNNNNNCTCC 6 cut(s) 255, 285, 840, 870, 1930, 1960
Bsc4I CCNNNNNNNGG 7 cut(s) 445, 591, 596, 703, 851, 869, 1671
Bse118I RCCGGY 1 cut(s) 536
Bse3DI GCAATG 2 cut(s) 31, 1904
Bse8I GATNNNNATC 1 cut(s) 1335
BseAI TCCGGA 1 cut(s) 1843
BseBI CCWGG 2 cut(s) 846, 864
BseCI ATCGAT 1 cut(s) 333
BseDI CCNNGG 9 cut(s) 412, 433, 590, 844, 862, 999, 1037, 1179, 1534
BseGI GGATG 3 cut(s) 407, 1633, 1840
BseJI GATNNNNATC 1 cut(s) 1335
BseLI CCNNNNNNNGG 7 cut(s) 445, 591, 596, 703, 851, 869, 1671
BseMI GCAATG 2 cut(s) 31, 1904
BseMII CTCAG 1 cut(s) 1998
BseRI GAGGAG 5 cut(s) 263, 432, 435, 438, 1938
BseSI GKGCMC 2 cut(s) 433, 801
BseX3I CGGCCG 1 cut(s) 244
BseXI GCAGC 2 cut(s) 76, 760
BsgI GTGCAG 3 cut(s) 168, 1403, 1739
Bsh1236I CGCG 1 cut(s) 279
Bsh1285I CGRYCG 1 cut(s) 247
BshFI GGCC 6 cut(s) 246, 438, 1035, 1400, 1861, 1937
BshNI GGYRCC 3 cut(s) 428, 692, 1272
BshVI ATCGAT 1 cut(s) 333
BsiEI CGRYCG 1 cut(s) 247
BsiHKAI GWGCWC 3 cut(s) 801, 1293, 1840
BsiHKCI CYCGRG 2 cut(s) 133, 1065
BsiSI CCGG 4 cut(s) 144, 291, 537, 1844
BslFI GGGAC 1 cut(s) 1042
BslI CCNNNNNNNGG 7 cut(s) 445, 591, 596, 703, 851, 869, 1671
BsmFI GGGAC 1 cut(s) 1042
BsnI GGCC 6 cut(s) 246, 438, 1035, 1400, 1861, 1937
BsoBI CYCGRG 2 cut(s) 133, 1065
Bsp119I TTCGAA 1 cut(s) 1896
Bsp1286I GDGCHC 4 cut(s) 433, 801, 1293, 1840
Bsp13I TCCGGA 1 cut(s) 1843
Bsp19I CCATGG 2 cut(s) 999, 1534
BspACI CCGC 4 cut(s) 277, 485, 1668, 1764
BspANI GGCC 6 cut(s) 246, 438, 1035, 1400, 1861, 1937
BspCNI CTCAG 1 cut(s) 1999
BspDI ATCGAT 1 cut(s) 333
BspEI TCCGGA 1 cut(s) 1843
BspFNI CGCG 1 cut(s) 279
BspHI TCATGA 2 cut(s) 33, 46
BspLI GGNNCC 5 cut(s) 394, 430, 694, 1274, 1570
BspMI ACCTGC 1 cut(s) 1425
BspOI GCTAGC 2 cut(s) 1520, 1617
BspPI GGATC 9 cut(s) 38, 387, 400, 524, 799, 853, 989, 1232, 1763
BspT104I TTCGAA 1 cut(s) 1896
BspT107I GGYRCC 3 cut(s) 428, 692, 1272
BsrDI GCAATG 2 cut(s) 31, 1904
BsrFI RCCGGY 1 cut(s) 536
BssAI RCCGGY 1 cut(s) 536
BssECI CCNNGG 9 cut(s) 412, 433, 590, 844, 862, 999, 1037, 1179, 1534
BssNI GRCGYC 1 cut(s) 558
BssSI CACGAG 1 cut(s) 811
BssT1I CCWWGG 5 cut(s) 590, 999, 1037, 1179, 1534
Bst2BI CACGAG 1 cut(s) 811
Bst2UI CCWGG 2 cut(s) 846, 864
Bst4CI ACNGT 7 cut(s) 634, 692, 1322, 1545, 1853, 2024, 2046
Bst6I CTCTTC 2 cut(s) 92, 959
BstACI GRCGYC 1 cut(s) 558
BstBI TTCGAA 1 cut(s) 1896
BstC8I GCNNGC 4 cut(s) 300, 1518, 1615, 1666
BstDEI CTNAG 4 cut(s) 662, 1188, 1238, 2007
BstDSI CCRYGG 2 cut(s) 999, 1534
BstEII GGTNACC 1 cut(s) 97
BstENI CCTNNNNNAGG 1 cut(s) 1669
BstF5I GGATG 3 cut(s) 407, 1633, 1840
BstFNI CGCG 1 cut(s) 279
BstH2I RGCGCY 1 cut(s) 386
BstHHI GCGC 2 cut(s) 235, 385
BstMCI CGRYCG 1 cut(s) 247
BstNI CCWGG 2 cut(s) 846, 864
BstNSI RCATGY 1 cut(s) 1315
BstPI GGTNACC 1 cut(s) 97
BstSCI CCNGG 2 cut(s) 844, 862
BstSFI CTRYAG 2 cut(s) 216, 1992
BstSLI GKGCMC 2 cut(s) 433, 801
BstUI CGCG 1 cut(s) 279
BstV1I GCAGC 2 cut(s) 76, 760
BstX2I RGATCY 3 cut(s) 392, 804, 994
BstYI RGATCY 3 cut(s) 392, 804, 994
BstZI CGGCCG 1 cut(s) 244
Bsu15I ATCGAT 1 cut(s) 333
BsuI GTATCC 1 cut(s) 1186
BsuRI GGCC 6 cut(s) 246, 438, 1035, 1400, 1861, 1937
BsuTUI ATCGAT 1 cut(s) 333
BtgI CCRYGG 2 cut(s) 999, 1534
BtsCI GGATG 3 cut(s) 407, 1633, 1840
BtsI GCAGTG 1 cut(s) 1727
BtsIMutI CAGTG 1 cut(s) 1727
BveI ACCTGC 1 cut(s) 1425
Cac8I GCNNGC 4 cut(s) 300, 1518, 1615, 1666
CciI TCATGA 2 cut(s) 33, 46
CfoI GCGC 2 cut(s) 235, 385
Cfr10I RCCGGY 1 cut(s) 536
Cfr13I GGNCC 2 cut(s) 1034, 1531
ClaI ATCGAT 1 cut(s) 333
CseI GACGC 1 cut(s) 229
Csp6I GTAC 8 cut(s) 472, 693, 739, 1004, 1051, 1309, 1701, 1775
CviAII CATG 9 cut(s) 34, 47, 545, 751, 1000, 1277, 1312, 1535, 1582
CviQI GTAC 8 cut(s) 472, 693, 739, 1004, 1051, 1309, 1701, 1775
DdeI CTNAG 4 cut(s) 662, 1188, 1238, 2007
DrdI GACNNNNNNGTC 1 cut(s) 191
DseDI GACNNNNNNGTC 1 cut(s) 191
EaeI YGGCCR 2 cut(s) 244, 1935
EagI CGGCCG 1 cut(s) 244
Eam1104I CTCTTC 2 cut(s) 92, 959
EarI CTCTTC 2 cut(s) 92, 959
Ecl136II GAGCTC 1 cut(s) 1291
EclXI CGGCCG 1 cut(s) 244
Eco130I CCWWGG 5 cut(s) 590, 999, 1037, 1179, 1534
Eco147I AGGCCT 1 cut(s) 1861
Eco24I GRGCYC 1 cut(s) 1293
Eco32I GATATC 2 cut(s) 499, 1456
Eco47I GGWCC 1 cut(s) 1531
Eco52I CGGCCG 1 cut(s) 244
Eco53kI GAGCTC 1 cut(s) 1291
Eco57I CTGAAG 1 cut(s) 1011
Eco88I CYCGRG 2 cut(s) 133, 1065
Eco91I GGTNACC 1 cut(s) 97
EcoICRI GAGCTC 1 cut(s) 1291
EcoNI CCTNNNNNAGG 1 cut(s) 1669
EcoO109I RGGNCCY 1 cut(s) 1034
EcoO65I GGTNACC 1 cut(s) 97
EcoRII CCWGG 2 cut(s) 844, 862
EcoRV GATATC 2 cut(s) 499, 1456
EcoT14I CCWWGG 5 cut(s) 590, 999, 1037, 1179, 1534
EcoT22I ATGCAT 1 cut(s) 1213
EcoT38I GRGCYC 1 cut(s) 1293
ErhI CCWWGG 5 cut(s) 590, 999, 1037, 1179, 1534
FaeI CATG 9 cut(s) 37, 50, 548, 754, 1003, 1280, 1315, 1538, 1585
FaqI GGGAC 1 cut(s) 1042
FatI CATG 9 cut(s) 33, 46, 544, 750, 999, 1276, 1311, 1534, 1581
FauNDI CATATG 3 cut(s) 610, 1156, 1926
FblI GTMKAC 1 cut(s) 1915
Fnu4HI GCNGC 3 cut(s) 65, 774, 1764
FokI GGATG 3 cut(s) 394, 1640, 1827
FriOI GRGCYC 1 cut(s) 1293
Fsp4HI GCNGC 3 cut(s) 65, 774, 1764
FspBI CTAG 6 cut(s) 368, 887, 1038, 1517, 1614, 1911
GlaI GCGC 2 cut(s) 234, 384
GluI GCNGC 3 cut(s) 65, 774, 1764
HaeII RGCGCY 1 cut(s) 386
HaeIII GGCC 6 cut(s) 246, 438, 1035, 1400, 1861, 1937
HapII CCGG 4 cut(s) 144, 291, 537, 1844
HgaI GACGC 1 cut(s) 229
HhaI GCGC 2 cut(s) 235, 385
Hin1I GRCGYC 1 cut(s) 558
Hin1II CATG 9 cut(s) 37, 50, 548, 754, 1003, 1280, 1315, 1538, 1585
Hin6I GCGC 2 cut(s) 233, 383
HinP1I GCGC 2 cut(s) 233, 383
HincII GTYRAC 4 cut(s) 526, 562, 688, 936
HindII GTYRAC 4 cut(s) 526, 562, 688, 936
HindIII AAGCTT 2 cut(s) 1097, 1354
HinfI GANTC 9 cut(s) 152, 201, 224, 335, 912, 1331, 1481, 1622, 2009
HpaI GTTAAC 1 cut(s) 688
HpaII CCGG 4 cut(s) 144, 291, 537, 1844
HphI GGTGA 5 cut(s) 196, 313, 868, 886, 1298
Hpy166II GTNNAC 8 cut(s) 526, 562, 688, 799, 936, 1531, 1916, 2049
Hpy188I TCNGA 8 cut(s) 200, 416, 718, 732, 1216, 1549, 1627, 1643
Hpy188III TCNNGA 7 cut(s) 34, 47, 133, 505, 1589, 1782, 1844
Hpy8I GTNNAC 8 cut(s) 526, 562, 688, 799, 936, 1531, 1916, 2049
Hpy99I CGWCG 3 cut(s) 245, 560, 781
HpyAV CCTTC 8 cut(s) 114, 133, 277, 682, 965, 1665, 1739, 1872
HpyCH4III ACNGT 7 cut(s) 634, 692, 1322, 1545, 1853, 2024, 2046
HpyCH4IV ACGT 3 cut(s) 558, 1691, 1967
HpyF3I CTNAG 4 cut(s) 662, 1188, 1238, 2007
HpySE526I ACGT 3 cut(s) 558, 1691, 1967
Hsp92I GRCGYC 1 cut(s) 558
Hsp92II CATG 9 cut(s) 37, 50, 548, 754, 1003, 1280, 1315, 1538, 1585
HspAI GCGC 2 cut(s) 233, 383
Kpn2I TCCGGA 1 cut(s) 1843
KpnI GGTACC 1 cut(s) 696
KspAI GTTAAC 1 cut(s) 688
LmnI GCTCC 2 cut(s) 1296, 1732
Lsp1109I GCAGC 2 cut(s) 76, 760
LweI GCATC 5 cut(s) 163, 976, 1220, 1252, 2078
MaeI CTAG 6 cut(s) 368, 887, 1038, 1517, 1614, 1911
MaeII ACGT 3 cut(s) 558, 1691, 1967
MaeIII GTNAC 3 cut(s) 97, 638, 1597
MboII GAAGA 9 cut(s) 74, 79, 367, 493, 973, 976, 1004, 1436, 2049
MfeI CAATTG 2 cut(s) 16, 1557
MflI RGATCY 3 cut(s) 392, 804, 994
MhlI GDGCHC 4 cut(s) 433, 801, 1293, 1840
MlsI TGGCCA 1 cut(s) 1937
MluNI TGGCCA 1 cut(s) 1937
MlyI GAGTC 3 cut(s) 146, 195, 2018
MmeI TCCRAC 4 cut(s) 223, 1346, 1458, 1527
Mox20I TGGCCA 1 cut(s) 1937
Mph1103I ATGCAT 1 cut(s) 1213
MroI TCCGGA 1 cut(s) 1843
MscI TGGCCA 1 cut(s) 1937
MseI TTAA 6 cut(s) 12, 687, 1167, 1349, 1361, 1890
MslI CAYNNNNRTG 1 cut(s) 624
Msp20I TGGCCA 1 cut(s) 1937
MspI CCGG 4 cut(s) 144, 291, 537, 1844
MspR9I CCNGG 2 cut(s) 846, 864
MunI CAATTG 2 cut(s) 16, 1557
MvaI CCWGG 2 cut(s) 846, 864
MvnI CGCG 1 cut(s) 279
NcoI CCATGG 2 cut(s) 999, 1534
NdeI CATATG 3 cut(s) 610, 1156, 1926
NheI GCTAGC 2 cut(s) 1516, 1613
NlaIII CATG 9 cut(s) 37, 50, 548, 754, 1003, 1280, 1315, 1538, 1585
NlaIV GGNNCC 5 cut(s) 394, 430, 694, 1274, 1570
NmeAIII GCCGAG 2 cut(s) 272, 414
NsiI ATGCAT 1 cut(s) 1213
NspI RCATGY 1 cut(s) 1315
NspV TTCGAA 1 cut(s) 1896
OliI CACNNNNGTG 1 cut(s) 624
PaeR7I CTCGAG 2 cut(s) 133, 1065
PagI TCATGA 2 cut(s) 33, 46
PceI AGGCCT 1 cut(s) 1861
PfeI GAWTC 6 cut(s) 224, 335, 912, 1331, 1481, 1622
PflFI GACNNNGTC 1 cut(s) 752
PflMI CCANNNNNTGG 4 cut(s) 591, 703, 851, 869
PkrI GCNGC 3 cut(s) 66, 775, 1765
PleI GAGTC 3 cut(s) 146, 195, 2017
PpsI GAGTC 3 cut(s) 146, 195, 2017
Psp124BI GAGCTC 1 cut(s) 1293
Psp6I CCWGG 2 cut(s) 844, 862
PspEI GGTNACC 1 cut(s) 97
PspGI CCWGG 2 cut(s) 844, 862
PspN4I GGNNCC 5 cut(s) 394, 430, 694, 1274, 1570
PspPI GGNCC 2 cut(s) 1034, 1531
PspXI VCTCGAGB 1 cut(s) 1065
PsuI RGATCY 3 cut(s) 392, 804, 994
PsyI GACNNNGTC 1 cut(s) 752
RsaI GTAC 8 cut(s) 473, 694, 740, 1005, 1052, 1310, 1702, 1776
RsaNI GTAC 8 cut(s) 472, 693, 739, 1004, 1051, 1309, 1701, 1775
RseI CAYNNNNRTG 1 cut(s) 624
SacI GAGCTC 1 cut(s) 1293
SaqAI TTAA 6 cut(s) 12, 687, 1167, 1349, 1361, 1890
SatI GCNGC 3 cut(s) 65, 774, 1764
Sau96I GGNCC 2 cut(s) 1034, 1531
ScaI AGTACT 2 cut(s) 740, 1702
SchI GAGTC 3 cut(s) 146, 195, 2018
ScrFI CCNGG 2 cut(s) 846, 864
SduI GDGCHC 4 cut(s) 433, 801, 1293, 1840
SfaNI GCATC 5 cut(s) 163, 976, 1220, 1252, 2078
SfcI CTRYAG 2 cut(s) 216, 1992
Sfr274I CTCGAG 2 cut(s) 133, 1065
SfuI TTCGAA 1 cut(s) 1896
SinI GGWCC 1 cut(s) 1531
SlaI CTCGAG 2 cut(s) 133, 1065
SmiMI CAYNNNNRTG 1 cut(s) 624
SmlI CTYRAG 4 cut(s) 133, 569, 1065, 1389
SmoI CTYRAG 4 cut(s) 133, 569, 1065, 1389
SpeI ACTAGT 1 cut(s) 886
SseBI AGGCCT 1 cut(s) 1861
SsiI CCGC 4 cut(s) 277, 485, 1668, 1764
SspI AATATT 2 cut(s) 466, 604
SspMI CTAG 6 cut(s) 368, 887, 1038, 1517, 1614, 1911
SstI GAGCTC 1 cut(s) 1293
StuI AGGCCT 1 cut(s) 1861
StyD4I CCNGG 2 cut(s) 844, 862
StyI CCWWGG 5 cut(s) 590, 999, 1037, 1179, 1534
TaaI ACNGT 7 cut(s) 634, 692, 1322, 1545, 1853, 2024, 2046
TaiI ACGT 3 cut(s) 561, 1694, 1970
TaqI TCGA 8 cut(s) 134, 183, 333, 555, 1066, 1246, 1522, 1896
TatI WGTACW 4 cut(s) 738, 1308, 1700, 1774
TauI GCSGC 1 cut(s) 1766
TfiI GAWTC 6 cut(s) 224, 335, 912, 1331, 1481, 1622
Tru1I TTAA 6 cut(s) 12, 687, 1167, 1349, 1361, 1890
Tru9I TTAA 6 cut(s) 12, 687, 1167, 1349, 1361, 1890
TscAI CASTG 1 cut(s) 1727
TseI GCWGC 2 cut(s) 64, 773
TspDTI ATGAA 7 cut(s) 35, 237, 367, 904, 940, 1126, 1293
TspGWI ACGGA 1 cut(s) 405
TspRI CASTG 1 cut(s) 1727
Tth111I GACNNNGTC 1 cut(s) 752
Van91I CCANNNNNTGG 4 cut(s) 591, 703, 851, 869
VneI GTGCAC 1 cut(s) 797
VpaK11BI GGWCC 1 cut(s) 1531
XagI CCTNNNNNAGG 1 cut(s) 1669
XapI RAATTY 2 cut(s) 817, 1016
XceI RCATGY 1 cut(s) 1315
XcmI CCANNNNNNNNNTGG 1 cut(s) 1579
XhoI CTCGAG 2 cut(s) 133, 1065
XmaJI CCTAGG 1 cut(s) 1037
XmiI GTMKAC 1 cut(s) 1915
XspI CTAG 6 cut(s) 368, 887, 1038, 1517, 1614, 1911
ZraI GACGTC 1 cut(s) 559
ZrmI AGTACT 2 cut(s) 740, 1702
Zsp2I ATGCAT 1 cut(s) 1213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.