Rroxscaffold_1G00047420

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
67021152 .. 67023120
1969 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00047420.1

Sequence Viewer

Length: 1875 bp
ATGCTTATACCGACGGCCAACTCCTCCGGCTCACCAAAAGCGCCAGAGAACCTAAAGTGGCTGGCAACGTTGGTCGAGCCACGCAACAAAACCTATGGCGATGGGTTGGCGTTCTTCCTGGCGCCAAAAGGATCCTTACTCAACAGTGCATTAGGAGGTGGCGGCAAGCTTGGCCTCCCCGTCGCAGACCTTCCGGGAGGGAATGAGTACGCGTTTGTGGCAGTGGAGTTTGATATCTATCAGAATCAGCTGCCAAGCTACATCGACCCCCAATACGATCACGTGGGGGTCGATGTCAACAATCTCAGGTCTAATATTACCATGGCTTGGTCTGGAGATATTCCGAATGCAAAAATCAACAGTGCTTCGGTTAGTTATAACTCTAGCTCAAAAACTCTTAGTGTTGCATACACCACTTTTGTGAATGATACAGCTGGTATCCAAATGCAAGTGATCAGACATCTTCATTACGTGGTTGATCTGAAACAGTACTTGCCCGATTGGGTAATTGTTGGGTTCTCTGCTGCAACCGGTGATAGGATTGCTTTGTCCGAGATCATCTCATGGAATTTCACTTCGACTTCTATCGTTGATGAGATTGTTGATGAGACAGACACTGCACCAGCAACACGGAACCCTGATACAGTTGAACAAAAGTCAAGAAATAACAATATACCACGAATTGCTGTGGGGCTAGGTGTTGGTGGAAGTATCTTGGTGGCGGGGTTGGCTTTGGTTTGGTACATCTTTCGGAGGAAGAGGCAAGCACTTAAAAATGATGGACGTTCCATGGTGGTACTCAATGACGAGTTCGAAAGGGGAACAGGCCCCAGGAAGTTTTTGTACAGCGAGTTGGCTAGAGCCACGAGTAATTTTGATGAAGGAGACAAGCTTGGAGAGGGAGGATTTGGTGGAGTCTATAGAGGATTCATAAAAGACTTGAACACATATGTTGCTGTTAAGAGGGTCTCCAAGGGATCCAAACAAGGGCTAAAGGAGTACGCAGCCGAAGTCAGGATCATCGGTCAACTTAGACATCGAAACCTTGTGCAACTCATTGGTTGGTGTCACGAAAACGGAGATCTCCTACTTGTGTATGAGTTCATGCCCCACGGCAGTTTAGATTCTTATTTGTTCAAAGCAGAAGGCTTCTTGAATTGGGAGGTAAGATACAAAATTGCTCTTGGCTTGGCCAGCGGTGTTCTTTATCTACATGAAGGATGTGAACAATGTATACTGCACAGGGATATCAAATCAAGCAATGTTATGTTGGATTTGAATTTCAGCGTGAAACTTGGAGATTTCGGCCTAGCTAGACTTATGGAGCACGAAAAAGGGACGCTAACAACTATTGTGGCTGGAACTAGGGGCTACATGGCTCTTGATTATGTTGTCACAGGCAAGGCTAGCAAGGAGTCAGATGTCTATAGCTTCGGAGTTGTTGCTTTGGAAATAGCTTGTGGGAGAAGATCCATGGATTTCGATTTGGAAAGTAAGAGGATCAACTTAGTGGAGTGGGTGTGGCAGCTTTATGGAGAAGAGAAACTTATTGAAGCAGCTGACCCAAAATTGTGTGGAGATTTTGATGAGAAACAAATCGAGTGTTTGATGATTGTTGGGCTCTGGTGTGCTCACCCAGACTATAATTTCAGACCTCCAATACTACAAGCGATTCAAGTGCTTAACTTCAAGGAACAATTGCCCATTCTCCCAGCAATCATGCCAATGGCCCCTTCTTTTGCTCGTCCAGTTCGGGCATTGAGTGATACTATTAGTGGTTCTGAAATAGGTCTTACTAAGTCTTCAAATAGTGACAGCACCAATTCCTCAAAGTTGGCTTCATCTTCTGCAAATTATCAGTCATCACCTCTTTGA

Protein Analysis

624

Amino Acids

68.64

Weight (kDa)

5.8

Isoelectric Point (pI)

35.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 27 - 199 1e-37 Legume lectin domain
Lectin_L-type_dom PF18483 32 - 185 4.2e-07 Legume lectin beta-barrel domain
Pkinase PF00069 293 - 493 9e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 295 - 489 1.2e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 378
AccB1I GGYRCC 1 cut(s) 121
AccB7I CCANNNNNTGG 1 cut(s) 327
AccI GTMKAC 1 cut(s) 1234
AccII CGCG 1 cut(s) 212
AciI CCGC 3 cut(s) 162, 722, 1197
AclI AACGTT 1 cut(s) 68
AclWI GGATC 7 cut(s) 126, 139, 972, 985, 1025, 1464, 1508
AcoI YGGCCR 2 cut(s) 15, 1191
AcsI RAATTY 2 cut(s) 568, 1279
AcvI CACGTG 1 cut(s) 283
AcyI GRCGYC 1 cut(s) 122
AfaI GTAC 6 cut(s) 209, 491, 743, 798, 845, 1001
AfiI CCNNNNNNNGG 4 cut(s) 327, 537, 987, 1014
AflIII ACRYGT 1 cut(s) 210
AgeI ACCGGT 1 cut(s) 530
AgsI TTSAA 9 cut(s) 650, 943, 1138, 1156, 1279, 1553, 1676, 1690, 1806
AjnI CCWGG 2 cut(s) 117, 830
AjuI GAANNNNNNNTTGG 2 cut(s) 1717, 1749
AleI CACNNNNGTG 1 cut(s) 419
Alw21I GWGCWC 2 cut(s) 1329, 1633
Alw26I GTCTC 3 cut(s) 602, 879, 973
AlwI GGATC 7 cut(s) 126, 139, 972, 985, 1025, 1464, 1508
AlwNI CAGNNNCTG 1 cut(s) 617
AoxI GGCC 6 cut(s) 15, 172, 826, 1191, 1306, 1728
ApeKI GCWGC 5 cut(s) 250, 524, 1004, 1525, 1556
ApoI RAATTY 2 cut(s) 568, 1279
ArsI GACNNNNNNTTYG 1 cut(s) 1844
AsiGI ACCGGT 1 cut(s) 530
AspLEI GCGC 2 cut(s) 43, 124
AspS9I GGNCC 2 cut(s) 827, 1729
AsuC2I CCSGG 1 cut(s) 195
AsuHPI GGTGA 4 cut(s) 24, 545, 1625, 1857
AsuII TTCGAA 1 cut(s) 813
AsuNHI GCTAGC 1 cut(s) 1406
BalI TGGCCA 1 cut(s) 1193
BamHI GGATCC 2 cut(s) 131, 977
BanI GGYRCC 1 cut(s) 121
BanII GRGCYC 1 cut(s) 1623
BarI GAAGNNNNNNTAC 2 cut(s) 827, 859
BauI CACGAG 1 cut(s) 865
BbrPI CACGTG 1 cut(s) 283
BbsI GAAGAC 1 cut(s) 1794
Bbv12I GWGCWC 2 cut(s) 1329, 1633
BbvI GCAGC 5 cut(s) 237, 511, 1016, 1537, 1568
BccI CCATC 2 cut(s) 95, 773
BceAI ACGGC 2 cut(s) 30, 1129
BcgI CGANNNNNNTGC 2 cut(s) 1660, 1694
BciT130I CCWGG 2 cut(s) 119, 832
BciVI GTATCC 1 cut(s) 449
BclI TGATCA 1 cut(s) 453
BcnI CCSGG 1 cut(s) 195
BcoDI GTCTC 3 cut(s) 602, 879, 973
BfaI CTAG 7 cut(s) 384, 695, 858, 1310, 1314, 1365, 1407
BfmI CTRYAG 2 cut(s) 919, 1426
BfoI RGCGCY 2 cut(s) 44, 125
BfuI GTATCC 1 cut(s) 449
BglII AGATCT 1 cut(s) 1081
BisI GCNGC 6 cut(s) 163, 251, 525, 1005, 1526, 1557
BlsI GCNGC 6 cut(s) 164, 252, 526, 1006, 1527, 1558
BmcAI AGTACT 1 cut(s) 491
Bme1390I CCNGG 3 cut(s) 119, 195, 832
BmgT120I GGNCC 2 cut(s) 827, 1729
BmiI GGNNCC 6 cut(s) 123, 133, 635, 829, 979, 1731
BmrFI CCNGG 3 cut(s) 119, 195, 832
BmtI GCTAGC 1 cut(s) 1410
BpiI GAAGAC 1 cut(s) 1794
BplI GAGNNNNNCTC 2 cut(s) 545, 577
BpmI CTGGAG 1 cut(s) 354
Bpu14I TTCGAA 1 cut(s) 813
BpuMI CCSGG 1 cut(s) 195
BsaAI YACGTR 2 cut(s) 283, 472
BsaBI GATNNNNATC 1 cut(s) 237
BsaHI GRCGYC 1 cut(s) 122
BsaI GGTCTC 1 cut(s) 973
BsaJI CCNNGG 6 cut(s) 321, 789, 830, 972, 1111, 1473
BsaWI WCCGGW 1 cut(s) 530
BsaXI ACNNNNNCTCC 2 cut(s) 1505, 1535
Bsc4I CCNNNNNNNGG 4 cut(s) 327, 537, 987, 1014
Bse118I RCCGGY 1 cut(s) 530
Bse1I ACTGG 1 cut(s) 1748
Bse3DI GCAATG 1 cut(s) 1267
Bse8I GATNNNNATC 1 cut(s) 237
BseBI CCWGG 2 cut(s) 119, 832
BseDI CCNNGG 6 cut(s) 321, 789, 830, 972, 1111, 1473
BseGI GGATG 1 cut(s) 1226
BseJI GATNNNNATC 1 cut(s) 237
BseLI CCNNNNNNNGG 4 cut(s) 327, 537, 987, 1014
BseMI GCAATG 1 cut(s) 1267
BseMII CTCAG 1 cut(s) 319
BseNI ACTGG 1 cut(s) 1748
BseRI GAGGAG 1 cut(s) 13
BseXI GCAGC 5 cut(s) 237, 511, 1016, 1537, 1568
BseYI CCCAGC 1 cut(s) 1711
BsgI GTGCAG 2 cut(s) 603, 1223
Bsh1236I CGCG 1 cut(s) 212
BshFI GGCC 6 cut(s) 17, 174, 828, 1193, 1308, 1730
BshNI GGYRCC 1 cut(s) 121
BshTI ACCGGT 1 cut(s) 530
BsiHKAI GWGCWC 2 cut(s) 1329, 1633
BsiSI CCGG 3 cut(s) 27, 194, 531
BslFI GGGAC 1 cut(s) 1351
BslI CCNNNNNNNGG 4 cut(s) 327, 537, 987, 1014
BsmAI GTCTC 3 cut(s) 602, 879, 973
BsmFI GGGAC 1 cut(s) 1351
BsmI GAATGC 1 cut(s) 352
BsnI GGCC 6 cut(s) 17, 174, 828, 1193, 1308, 1730
Bso31I GGTCTC 1 cut(s) 973
Bsp119I TTCGAA 1 cut(s) 813
Bsp1286I GDGCHC 3 cut(s) 1329, 1623, 1633
Bsp1407I TGTACA 1 cut(s) 843
Bsp19I CCATGG 3 cut(s) 321, 789, 1473
BspACI CCGC 3 cut(s) 162, 722, 1197
BspANI GGCC 6 cut(s) 17, 174, 828, 1193, 1308, 1730
BspCNI CTCAG 1 cut(s) 318
BspFNI CGCG 1 cut(s) 212
BspLI GGNNCC 6 cut(s) 123, 133, 635, 829, 979, 1731
BspOI GCTAGC 1 cut(s) 1410
BspPI GGATC 7 cut(s) 126, 139, 972, 985, 1025, 1464, 1508
BspT104I TTCGAA 1 cut(s) 813
BspT107I GGYRCC 1 cut(s) 121
BspTNI GGTCTC 1 cut(s) 973
BsrDI GCAATG 1 cut(s) 1267
BsrFI RCCGGY 1 cut(s) 530
BsrGI TGTACA 1 cut(s) 843
BsrI ACTGG 1 cut(s) 1748
BssAI RCCGGY 1 cut(s) 530
BssECI CCNNGG 6 cut(s) 321, 789, 830, 972, 1111, 1473
BssNAI GTATAC 1 cut(s) 1235
BssNI GRCGYC 1 cut(s) 122
BssSI CACGAG 1 cut(s) 865
BssT1I CCWWGG 4 cut(s) 321, 789, 972, 1473
Bst1107I GTATAC 1 cut(s) 1235
Bst2BI CACGAG 1 cut(s) 865
Bst2UI CCWGG 2 cut(s) 119, 832
Bst4CI ACNGT 4 cut(s) 146, 362, 489, 646
Bst6I CTCTTC 2 cut(s) 752, 1533
BstACI GRCGYC 1 cut(s) 122
BstAUI TGTACA 1 cut(s) 843
BstBAI YACGTR 2 cut(s) 283, 472
BstBI TTCGAA 1 cut(s) 813
BstC8I GCNNGC 5 cut(s) 63, 167, 765, 1195, 1408
BstDEI CTNAG 5 cut(s) 305, 398, 1031, 1507, 1797
BstDSI CCRYGG 4 cut(s) 321, 789, 1111, 1473
BstF5I GGATG 1 cut(s) 1226
BstFNI CGCG 1 cut(s) 212
BstH2I RGCGCY 2 cut(s) 44, 125
BstHHI GCGC 2 cut(s) 43, 124
BstMAI GTCTC 3 cut(s) 602, 879, 973
BstMWI GCNNNNNNNGC 5 cut(s) 171, 218, 728, 1194, 1407
BstNI CCWGG 2 cut(s) 119, 832
BstSCI CCNGG 3 cut(s) 117, 193, 830
BstSFI CTRYAG 2 cut(s) 919, 1426
BstUI CGCG 1 cut(s) 212
BstV1I GCAGC 5 cut(s) 237, 511, 1016, 1537, 1568
BstV2I GAAGAC 1 cut(s) 1794
BstX2I RGATCY 4 cut(s) 131, 977, 1081, 1469
BstYI RGATCY 4 cut(s) 131, 977, 1081, 1469
BstZ17I GTATAC 1 cut(s) 1235
BsuI GTATCC 1 cut(s) 449
BsuRI GGCC 6 cut(s) 17, 174, 828, 1193, 1308, 1730
BtgI CCRYGG 4 cut(s) 321, 789, 1111, 1473
BtgZI GCGATG 1 cut(s) 114
BtsCI GGATG 1 cut(s) 1226
BtsI GCAGTG 2 cut(s) 228, 615
BtsIMutI CAGTG 4 cut(s) 151, 228, 367, 615
Cac8I GCNNGC 5 cut(s) 63, 167, 765, 1195, 1408
CaiI CAGNNNCTG 1 cut(s) 617
CfoI GCGC 2 cut(s) 43, 124
Cfr10I RCCGGY 1 cut(s) 530
Cfr13I GGNCC 2 cut(s) 827, 1729
CseI GACGC 1 cut(s) 1348
Csp6I GTAC 6 cut(s) 208, 490, 742, 797, 844, 1000
CspAI ACCGGT 1 cut(s) 530
CspCI CAANNNNNGTGG 2 cut(s) 1335, 1370
CviAII CATG 8 cut(s) 322, 564, 790, 1105, 1214, 1375, 1474, 1720
CviQI GTAC 6 cut(s) 208, 490, 742, 797, 844, 1000
DdeI CTNAG 5 cut(s) 305, 398, 1031, 1507, 1797
DinI GGCGCC 1 cut(s) 123
EaeI YGGCCR 2 cut(s) 15, 1191
Eam1104I CTCTTC 2 cut(s) 752, 1533
EarI CTCTTC 2 cut(s) 752, 1533
Eco130I CCWWGG 4 cut(s) 321, 789, 972, 1473
Eco24I GRGCYC 1 cut(s) 1623
Eco31I GGTCTC 1 cut(s) 973
Eco32I GATATC 2 cut(s) 235, 1249
Eco72I CACGTG 1 cut(s) 283
EcoO109I RGGNCCY 1 cut(s) 827
EcoRII CCWGG 2 cut(s) 117, 830
EcoRV GATATC 2 cut(s) 235, 1249
EcoT14I CCWWGG 4 cut(s) 321, 789, 972, 1473
EcoT38I GRGCYC 1 cut(s) 1623
EgeI GGCGCC 1 cut(s) 123
EheI GGCGCC 1 cut(s) 123
ErhI CCWWGG 4 cut(s) 321, 789, 972, 1473
FaeI CATG 8 cut(s) 325, 567, 793, 1108, 1217, 1378, 1477, 1723
FalI AAGNNNNNCTT 2 cut(s) 1530, 1562
FaqI GGGAC 1 cut(s) 1351
FatI CATG 8 cut(s) 321, 563, 789, 1104, 1213, 1374, 1473, 1719
FauI CCCGC 1 cut(s) 715
FauNDI CATATG 1 cut(s) 949
FbaI TGATCA 1 cut(s) 453
FblI GTMKAC 1 cut(s) 1234
Fnu4HI GCNGC 6 cut(s) 163, 251, 525, 1005, 1526, 1557
FokI GGATG 1 cut(s) 1233
FriOI GRGCYC 1 cut(s) 1623
Fsp4HI GCNGC 6 cut(s) 163, 251, 525, 1005, 1526, 1557
FspBI CTAG 7 cut(s) 384, 695, 858, 1310, 1314, 1365, 1407
GlaI GCGC 2 cut(s) 42, 123
GluI GCNGC 6 cut(s) 163, 251, 525, 1005, 1526, 1557
GsaI CCCAGC 1 cut(s) 1715
GsuI CTGGAG 1 cut(s) 354
HaeII RGCGCY 2 cut(s) 44, 125
HaeIII GGCC 6 cut(s) 17, 174, 828, 1193, 1308, 1730
HapII CCGG 3 cut(s) 27, 194, 531
HgaI GACGC 1 cut(s) 1348
HhaI GCGC 2 cut(s) 43, 124
Hin1I GRCGYC 1 cut(s) 122
Hin1II CATG 8 cut(s) 325, 567, 793, 1108, 1217, 1378, 1477, 1723
Hin6I GCGC 2 cut(s) 41, 122
HinP1I GCGC 2 cut(s) 41, 122
HincII GTYRAC 2 cut(s) 298, 1028
HindII GTYRAC 2 cut(s) 298, 1028
HindIII AAGCTT 2 cut(s) 167, 890
HinfI GANTC 6 cut(s) 244, 915, 927, 1124, 1415, 1672
HpaII CCGG 3 cut(s) 27, 194, 531
HphI GGTGA 4 cut(s) 24, 545, 1625, 1857
Hpy166II GTNNAC 4 cut(s) 298, 1028, 1226, 1235
Hpy188III TCNNGA 6 cut(s) 333, 660, 1015, 1070, 1153, 1382
Hpy8I GTNNAC 4 cut(s) 298, 1028, 1226, 1235
Hpy99I CGWCG 2 cut(s) 16, 185
HpyAV CCTTC 5 cut(s) 200, 875, 1139, 1211, 1743
HpyCH4III ACNGT 4 cut(s) 146, 362, 489, 646
HpyCH4IV ACGT 4 cut(s) 68, 282, 471, 784
HpyCH4V TGCA 9 cut(s) 149, 350, 407, 448, 527, 620, 1051, 1240, 1850
HpyF10VI GCNNNNNNNGC 5 cut(s) 171, 218, 728, 1194, 1407
HpyF3I CTNAG 5 cut(s) 305, 398, 1031, 1507, 1797
HpySE526I ACGT 4 cut(s) 68, 282, 471, 784
Hsp92I GRCGYC 1 cut(s) 122
Hsp92II CATG 8 cut(s) 325, 567, 793, 1108, 1217, 1378, 1477, 1723
HspAI GCGC 2 cut(s) 41, 122
KasI GGCGCC 1 cut(s) 121
Ksp22I TGATCA 1 cut(s) 453
LmnI GCTCC 1 cut(s) 1324
Lsp1109I GCAGC 5 cut(s) 237, 511, 1016, 1537, 1568
MaeI CTAG 7 cut(s) 384, 695, 858, 1310, 1314, 1365, 1407
MaeII ACGT 4 cut(s) 68, 282, 471, 784
MaeIII GTNAC 3 cut(s) 1067, 1393, 1811
MboII GAAGA 7 cut(s) 106, 455, 769, 1479, 1550, 1794, 1836
MfeI CAATTG 1 cut(s) 1697
MflI RGATCY 4 cut(s) 131, 977, 1081, 1469
MhlI GDGCHC 3 cut(s) 1329, 1623, 1633
MlsI TGGCCA 1 cut(s) 1193
MluI ACGCGT 1 cut(s) 210
MluNI TGGCCA 1 cut(s) 1193
Mly113I GGCGCC 1 cut(s) 122
MlyI GAGTC 2 cut(s) 924, 1424
MmeI TCCRAC 1 cut(s) 1251
Mox20I TGGCCA 1 cut(s) 1193
MscI TGGCCA 1 cut(s) 1193
MseI TTAA 3 cut(s) 771, 960, 1683
MslI CAYNNNNRTG 2 cut(s) 419, 1724
Msp20I TGGCCA 1 cut(s) 1193
MspA1I CMGCKG 4 cut(s) 250, 434, 1197, 1559
MspI CCGG 3 cut(s) 27, 194, 531
MspR9I CCNGG 3 cut(s) 119, 195, 832
MunI CAATTG 1 cut(s) 1697
Mva1269I GAATGC 1 cut(s) 352
MvaI CCWGG 2 cut(s) 119, 832
MvnI CGCG 1 cut(s) 212
MwoI GCNNNNNNNGC 5 cut(s) 171, 218, 728, 1194, 1407
NarI GGCGCC 1 cut(s) 122
NciI CCSGG 1 cut(s) 195
NcoI CCATGG 3 cut(s) 321, 789, 1473
NdeI CATATG 1 cut(s) 949
NheI GCTAGC 1 cut(s) 1406
NlaIII CATG 8 cut(s) 325, 567, 793, 1108, 1217, 1378, 1477, 1723
NlaIV GGNNCC 6 cut(s) 123, 133, 635, 829, 979, 1731
NmuCI GTSAC 3 cut(s) 1067, 1393, 1811
NspV TTCGAA 1 cut(s) 813
OliI CACNNNNGTG 1 cut(s) 419
PcsI WCGNNNNNNNCGW 1 cut(s) 288
PctI GAATGC 1 cut(s) 352
PfeI GAWTC 4 cut(s) 244, 927, 1124, 1672
PflMI CCANNNNNTGG 1 cut(s) 327
PfoI TCCNGGA 1 cut(s) 193
PinAI ACCGGT 1 cut(s) 530
PkrI GCNGC 6 cut(s) 164, 252, 526, 1006, 1527, 1558
PleI GAGTC 2 cut(s) 923, 1423
PluTI GGCGCC 1 cut(s) 125
PmaCI CACGTG 1 cut(s) 283
PmlI CACGTG 1 cut(s) 283
PpsI GAGTC 2 cut(s) 923, 1423
Ppu21I YACGTR 2 cut(s) 283, 472
PsiI TTATAA 1 cut(s) 378
Psp1406I AACGTT 1 cut(s) 68
Psp6I CCWGG 2 cut(s) 117, 830
PspCI CACGTG 1 cut(s) 283
PspFI CCCAGC 1 cut(s) 1711
PspGI CCWGG 2 cut(s) 117, 830
PspN4I GGNNCC 6 cut(s) 123, 133, 635, 829, 979, 1731
PspPI GGNCC 2 cut(s) 827, 1729
PsrI GAACNNNNNNTAC 2 cut(s) 1218, 1250
PstNI CAGNNNCTG 1 cut(s) 617
PsuI RGATCY 4 cut(s) 131, 977, 1081, 1469
PvuII CAGCTG 3 cut(s) 250, 434, 1559
RsaI GTAC 6 cut(s) 209, 491, 743, 798, 845, 1001
RsaNI GTAC 6 cut(s) 208, 490, 742, 797, 844, 1000
RseI CAYNNNNRTG 2 cut(s) 419, 1724
SaqAI TTAA 3 cut(s) 771, 960, 1683
SatI GCNGC 6 cut(s) 163, 251, 525, 1005, 1526, 1557
Sau96I GGNCC 2 cut(s) 827, 1729
ScaI AGTACT 1 cut(s) 491
SchI GAGTC 2 cut(s) 924, 1424
ScrFI CCNGG 3 cut(s) 119, 195, 832
SduI GDGCHC 3 cut(s) 1329, 1623, 1633
SfcI CTRYAG 2 cut(s) 919, 1426
SfoI GGCGCC 1 cut(s) 123
SfuI TTCGAA 1 cut(s) 813
SmiMI CAYNNNNRTG 2 cut(s) 419, 1724
SsiI CCGC 3 cut(s) 162, 722, 1197
SspDI GGCGCC 1 cut(s) 121
SspI AATATT 1 cut(s) 316
SspMI CTAG 7 cut(s) 384, 695, 858, 1310, 1314, 1365, 1407
StyD4I CCNGG 3 cut(s) 117, 193, 830
StyI CCWWGG 4 cut(s) 321, 789, 972, 1473
TaaI ACNGT 4 cut(s) 146, 362, 489, 646
TaiI ACGT 4 cut(s) 71, 285, 474, 787
TaqI TCGA 8 cut(s) 75, 264, 291, 578, 813, 1039, 1482, 1599
TaqII GACCGA 1 cut(s) 1013
TatI WGTACW 2 cut(s) 489, 843
TauI GCSGC 1 cut(s) 165
TfiI GAWTC 4 cut(s) 244, 927, 1124, 1672
Tru1I TTAA 3 cut(s) 771, 960, 1683
Tru9I TTAA 3 cut(s) 771, 960, 1683
TscAI CASTG 4 cut(s) 151, 228, 367, 622
TseFI GTSAC 3 cut(s) 1067, 1393, 1811
TseI GCWGC 5 cut(s) 250, 524, 1004, 1525, 1556
Tsp45I GTSAC 3 cut(s) 1067, 1393, 1811
TspDTI ATGAA 6 cut(s) 455, 894, 919, 1093, 1230, 1830
TspGWI ACGGA 2 cut(s) 646, 1092
TspRI CASTG 4 cut(s) 151, 228, 367, 622
Van91I CCANNNNNTGG 1 cut(s) 327
XapI RAATTY 2 cut(s) 568, 1279
XmiI GTMKAC 1 cut(s) 1234
XspI CTAG 7 cut(s) 384, 695, 858, 1310, 1314, 1365, 1407
ZrmI AGTACT 1 cut(s) 491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.