RLG00000033408

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
26827502 .. 26829688
2187 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033408

Sequence Viewer

Length: 1926 bp
ATGGCTGTCAAAAACACATTGCGGTTGTCCCTAAAGCAGTTTCAATTGCTTCTTCTTCTCTTGTTACTGTTGCCCTTCTCTGCAACTCCATTGACCTTCAATTTCCCCAGCTTTCCCTCTACAGTTACCAACATTAATATATCTACGGAAGGAGATGCTGTTGCCGATGGCTTCCTCCGACTGACCAAGAGTGCTCGTGACCAGGAAATAAATGGGAGCGTTGGTAGAGCCACCTTCAAAGAAACCTTCCTCCTCCGACAGAACTCCACCCGAAAACTCGCTGATTTTACATCAAGTTTCGTATTCTCCGTTGACTCCAACAACAGCAACAACTACGGTGATGGGCTGGCCTTCTTCCTAGCACCGCCCGGGTCCTCACTGAACCCCACATTAGGATCAGGTAGCAGTCTTGGCCTTCCTGTCAACAGTACGCTGGCAAACTTTACCACGTCGAGTACTGAATACCCGTTTGTGGCTGTCGAGTTTGATATCTACCCTAATTATAAGCTAAAATCGATTGATTGGGGTATGGATGAGACTTACACTCATGTGGGCATCGACATCAACTCCGTCAAGTCTAACGTTACCGAGCGATGGGATGGTGGTGTCACGAAAGGAAAAGAAAATAATGCCACAATTAGTTACAACTCCACCTCGAAAAATCTTAGTGTTGCCTTCACTACGATAGATGGTCACAAAGTCCAGGTGATCAAAAGTATTTATTTCGTAGTCGATCTGCTTCAATACTTACCCGATAGGGTCATCGTTGGGTTCTCTGCCTCAACTGGAAGCTCATTTGCTCTGCATAAGATCAATTCTTGGAGCTTTGATTCAACTTCATTGGAAGAGGAAAACAGCACATCAATTCTTCCTGAGCCAACGGTCAAACCCAAGTCAGGAAATGCGAATGTTGGACTAGTAGTTGGGTTGGTTGTTGGGGGAGGTGTTATCTTGGCTGGTGTGCTGGGTTTGCTTTGGTTCGTCTTCTGCAGGAAGAGGAAGGATGCAGCAGGGGAAAGTAGTGATGATGATACTAGGATACTTCATGATTTGATCCCTGAAGACTTAGAAAAGGGGACAGGCCCTATGAAGTTTTCGTACAGTGAATTGGCCCTTGCAACTAGTAATTTTGAACAGGGACAAAAGCTTGGGGAGGGAGGGTTTGGTGGAGTTTACAAGGGCTTCATCAAAGATATGAACACGCACGTAGCTGTTAAGAAGATATCAAGGGGGTCTAAACAGGGGCTGAAGGAGTATGCAGCAGAAGTGAGTATCATTAGTCAGCTGAGGCATCGGAATCTGGTGCAACTCATCGACCATGGAAAGCTCTCGCAAACAACAATTGTGGCTGGAACCATGGGCTACATGGCTACGGAATATGTTACAACGGGAAAGGCTAGCAAGGAAACAGATGTCTATAGTTTCGGAGTTGTTGCTTTGGAAATAGCTTGTGGGAGAAAACCAATTGACCATAGGTATGAAGGAAAGCAAATCAATATGGTCGACTGGGTGTGGGAGCACTATGGAGAAGGGAAAATCATTGAAGCAGCCGACCCAAAATTGTGCGGGGATTTTGATGAGAAGCAAATGGAGTGCTTAATGATGGTTGGGTTATGGTGTGCTCATCCGGATCACAACTGTAGGCCTTTGATACAACAAGCAATCCAAGTGCTTGACTTCGAAGTTCCATTGCCCAATCTCCCATTGACAATGCCGGTGGCCTTTGCTCTTCCATTATCACTGTCGATGTTGTATAGTAGTGACACTACTAGAGGTCAAGGTGAGTCTTCAGGATATGGCTCTACCATCAACTCCTCACAGTTCACCTCATCTTCTAACACCCATTCTAATCCATCAGCAGCTTTTTCTAGAGAGAGAGCGTCCTCCTTCTCTCTAGAAATTTTATCAAATCAACCATCATTGTGA

Protein Analysis

642

Amino Acids

69.81

Weight (kDa)

5.72

Isoelectric Point (pI)

31.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 31 - 288 5.4e-57 Legume lectin domain
Lectin_L-type_dom PF18483 51 - 272 2e-08 Legume lectin beta-barrel domain
Pkinase PF00069 377 - 440 5.5e-10 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 378 - 442 5.3e-09 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 446 - 501 6.1e-07 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 453 - 494 9.6e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 504
AccI GTMKAC 1 cut(s) 1503
AccIII TCCGGA 1 cut(s) 1627
AciI CCGC 3 cut(s) 22, 365, 1566
AclI AACGTT 1 cut(s) 582
AclWI GGATC 3 cut(s) 403, 1048, 1638
AcsI RAATTY 1 cut(s) 1899
AcuI CTGAAG 3 cut(s) 1080, 1268, 1773
AfaI GTAC 3 cut(s) 430, 457, 1100
AfiI CCNNNNNNNGG 4 cut(s) 392, 472, 594, 896
AgsI TTSAA 7 cut(s) 44, 100, 238, 743, 834, 1133, 1544
AhlI ACTAGT 2 cut(s) 916, 1121
AjiI CACGTC 1 cut(s) 450
AjnI CCWGG 2 cut(s) 201, 702
AleI CACNNNNGTG 1 cut(s) 548
Alw21I GWGCWC 3 cut(s) 196, 1521, 1624
Alw26I GTCTC 1 cut(s) 530
AlwI GGATC 3 cut(s) 403, 1048, 1638
AlwNI CAGNNNCTG 1 cut(s) 1246
Ama87I CYCGRG 1 cut(s) 368
Aor13HI TCCGGA 1 cut(s) 1627
AoxI GGCC 6 cut(s) 348, 412, 1081, 1110, 1643, 1719
ApeKI GCWGC 4 cut(s) 1007, 1259, 1547, 1859
ApoI RAATTY 1 cut(s) 1899
AseI ATTAAT 1 cut(s) 135
AspS9I GGNCC 3 cut(s) 372, 1082, 1111
AsuC2I CCSGG 2 cut(s) 369, 370
AsuHPI GGTGA 4 cut(s) 350, 718, 1793, 1816
AsuII TTCGAA 1 cut(s) 1680
AsuNHI GCTAGC 1 cut(s) 1397
AvaI CYCGRG 1 cut(s) 368
AvaII GGWCC 1 cut(s) 372
BarI GAAGNNNNNNTAC 2 cut(s) 1082, 1114
BauI CACGAG 1 cut(s) 195
BbsI GAAGAC 3 cut(s) 976, 1068, 1779
Bbv12I GWGCWC 3 cut(s) 196, 1521, 1624
BbvCI CCTCAGC 1 cut(s) 1286
BbvI GCAGC 4 cut(s) 1019, 1271, 1559, 1871
BccI CCATC 9 cut(s) 161, 335, 588, 593, 683, 1597, 1814, 1861, 1924
BciT130I CCWGG 2 cut(s) 203, 704
BciVI GTATCC 1 cut(s) 1032
BclI TGATCA 1 cut(s) 708
BcnI CCSGG 2 cut(s) 369, 370
BcoDI GTCTC 1 cut(s) 530
BcuI ACTAGT 2 cut(s) 916, 1121
BfaI CTAG 8 cut(s) 359, 917, 1035, 1122, 1398, 1770, 1869, 1895
BfmI CTRYAG 4 cut(s) 120, 988, 1417, 1639
BfuI GTATCC 1 cut(s) 1032
BisI GCNGC 4 cut(s) 1008, 1260, 1548, 1860
BlsI GCNGC 4 cut(s) 1009, 1261, 1549, 1861
BmcAI AGTACT 1 cut(s) 457
Bme1390I CCNGG 4 cut(s) 203, 369, 370, 704
Bme18I GGWCC 1 cut(s) 372
BmeT110I CYCGRG 1 cut(s) 368
BmgBI CACGTC 1 cut(s) 450
BmgT120I GGNCC 3 cut(s) 372, 1082, 1111
BmiI GGNNCC 2 cut(s) 373, 1354
BmrFI CCNGG 4 cut(s) 203, 369, 370, 704
BmrI ACTGGG 1 cut(s) 1516
BmsI GCATC 4 cut(s) 145, 564, 994, 1300
BmtI GCTAGC 1 cut(s) 1401
BmuI ACTGGG 1 cut(s) 1516
BpiI GAAGAC 3 cut(s) 976, 1068, 1779
Bpu10I CCTNAGC 2 cut(s) 873, 1286
Bpu14I TTCGAA 1 cut(s) 1680
BpuMI CCSGG 2 cut(s) 369, 370
Bsa29I ATCGAT 1 cut(s) 515
BsaAI YACGTR 1 cut(s) 1207
BsaJI CCNNGG 3 cut(s) 368, 1318, 1356
BsaWI WCCGGW 1 cut(s) 1627
BsaXI ACNNNNNCTCC 8 cut(s) 144, 174, 208, 238, 551, 581, 1145, 1175
Bsc4I CCNNNNNNNGG 4 cut(s) 392, 472, 594, 896
Bse118I RCCGGY 1 cut(s) 1714
Bse1I ACTGG 2 cut(s) 790, 1511
Bse3DI GCAATG 2 cut(s) 17, 1688
BseAI TCCGGA 1 cut(s) 1627
BseBI CCWGG 2 cut(s) 203, 704
BseCI ATCGAT 1 cut(s) 515
BseDI CCNNGG 3 cut(s) 368, 1318, 1356
BseGI GGATG 4 cut(s) 538, 604, 1009, 1624
BseLI CCNNNNNNNGG 4 cut(s) 392, 472, 594, 896
BseMI GCAATG 2 cut(s) 17, 1688
BseMII CTCAG 2 cut(s) 864, 1277
BseNI ACTGG 2 cut(s) 790, 1511
BseRI GAGGAG 2 cut(s) 242, 1804
BseXI GCAGC 4 cut(s) 1019, 1271, 1559, 1871
BseYI CCCAGC 2 cut(s) 107, 964
BshFI GGCC 6 cut(s) 350, 414, 1083, 1112, 1645, 1721
BshVI ATCGAT 1 cut(s) 515
BsiHKAI GWGCWC 3 cut(s) 196, 1521, 1624
BsiHKCI CYCGRG 1 cut(s) 368
BsiSI CCGG 3 cut(s) 369, 1628, 1715
BslFI GGGAC 3 cut(s) 13, 1090, 1152
BslI CCNNNNNNNGG 4 cut(s) 392, 472, 594, 896
BsmAI GTCTC 1 cut(s) 530
BsmFI GGGAC 3 cut(s) 13, 1090, 1152
BsnI GGCC 6 cut(s) 350, 414, 1083, 1112, 1645, 1721
BsoBI CYCGRG 1 cut(s) 368
Bsp119I TTCGAA 1 cut(s) 1680
Bsp1286I GDGCHC 3 cut(s) 196, 1521, 1624
Bsp13I TCCGGA 1 cut(s) 1627
Bsp143I GATC 6 cut(s) 395, 708, 733, 810, 1053, 1630
Bsp19I CCATGG 2 cut(s) 1318, 1356
BspACI CCGC 3 cut(s) 22, 365, 1566
BspANI GGCC 6 cut(s) 350, 414, 1083, 1112, 1645, 1721
BspCNI CTCAG 2 cut(s) 865, 1278
BspDI ATCGAT 1 cut(s) 515
BspEI TCCGGA 1 cut(s) 1627
BspHI TCATGA 1 cut(s) 1045
BspLI GGNNCC 2 cut(s) 373, 1354
BspMAI CTGCAG 1 cut(s) 992
BspOI GCTAGC 1 cut(s) 1401
BspPI GGATC 3 cut(s) 403, 1048, 1638
BspQI GCTCTTC 1 cut(s) 1734
BspT104I TTCGAA 1 cut(s) 1680
BsrDI GCAATG 2 cut(s) 17, 1688
BsrFI RCCGGY 1 cut(s) 1714
BsrI ACTGG 2 cut(s) 790, 1511
BssAI RCCGGY 1 cut(s) 1714
BssECI CCNNGG 3 cut(s) 368, 1318, 1356
BssMI GATC 6 cut(s) 395, 708, 733, 810, 1053, 1630
BssSI CACGAG 1 cut(s) 195
BssT1I CCWWGG 2 cut(s) 1318, 1356
Bst2BI CACGAG 1 cut(s) 195
Bst2UI CCWGG 2 cut(s) 203, 704
Bst4CI ACNGT 9 cut(s) 69, 124, 338, 428, 883, 1103, 1640, 1743, 1821
Bst6I CTCTTC 3 cut(s) 840, 989, 1734
BstBAI YACGTR 1 cut(s) 1207
BstBI TTCGAA 1 cut(s) 1680
BstC8I GCNNGC 3 cut(s) 348, 435, 1399
BstDEI CTNAG 4 cut(s) 665, 873, 1066, 1286
BstDSI CCRYGG 2 cut(s) 1318, 1356
BstF5I GGATG 4 cut(s) 538, 604, 1009, 1624
BstKTI GATC 6 cut(s) 398, 711, 736, 813, 1056, 1633
BstMAI GTCTC 1 cut(s) 530
BstMBI GATC 6 cut(s) 395, 708, 733, 810, 1053, 1630
BstMWI GCNNNNNNNGC 2 cut(s) 411, 970
BstNI CCWGG 2 cut(s) 203, 704
BstSCI CCNGG 4 cut(s) 201, 367, 368, 702
BstSFI CTRYAG 4 cut(s) 120, 988, 1417, 1639
BstV1I GCAGC 4 cut(s) 1019, 1271, 1559, 1871
BstV2I GAAGAC 3 cut(s) 976, 1068, 1779
Bsu15I ATCGAT 1 cut(s) 515
BsuI GTATCC 1 cut(s) 1032
BsuRI GGCC 6 cut(s) 350, 414, 1083, 1112, 1645, 1721
BsuTUI ATCGAT 1 cut(s) 515
BtgI CCRYGG 2 cut(s) 1318, 1356
BtgZI GCGATG 1 cut(s) 607
BtrI CACGTC 1 cut(s) 450
BtsCI GGATG 4 cut(s) 538, 604, 1009, 1624
BtsIMutI CAGTG 3 cut(s) 377, 1108, 1739
Cac8I GCNNGC 3 cut(s) 348, 435, 1399
CaiI CAGNNNCTG 1 cut(s) 1246
CciI TCATGA 1 cut(s) 1045
Cfr10I RCCGGY 1 cut(s) 1714
Cfr13I GGNCC 3 cut(s) 372, 1082, 1111
Cfr9I CCCGGG 1 cut(s) 368
ClaI ATCGAT 1 cut(s) 515
CseI GACGC 1 cut(s) 1869
Csp6I GTAC 3 cut(s) 429, 456, 1099
CspCI CAANNNNNGTGG 4 cut(s) 1326, 1361, 1698, 1733
CviAII CATG 5 cut(s) 548, 1046, 1319, 1357, 1366
CviQI GTAC 3 cut(s) 429, 456, 1099
DdeI CTNAG 4 cut(s) 665, 873, 1066, 1286
DpnI GATC 6 cut(s) 397, 710, 735, 812, 1055, 1632
DpnII GATC 6 cut(s) 395, 708, 733, 810, 1053, 1630
Eam1104I CTCTTC 3 cut(s) 840, 989, 1734
EarI CTCTTC 3 cut(s) 840, 989, 1734
Eco130I CCWWGG 2 cut(s) 1318, 1356
Eco147I AGGCCT 1 cut(s) 1645
Eco32I GATATC 2 cut(s) 490, 1224
Eco47I GGWCC 1 cut(s) 372
Eco57I CTGAAG 3 cut(s) 1080, 1268, 1773
Eco88I CYCGRG 1 cut(s) 368
EcoO109I RGGNCCY 2 cut(s) 372, 1082
EcoRII CCWGG 2 cut(s) 201, 702
EcoRV GATATC 2 cut(s) 490, 1224
EcoT14I CCWWGG 2 cut(s) 1318, 1356
ErhI CCWWGG 2 cut(s) 1318, 1356
FaeI CATG 5 cut(s) 551, 1049, 1322, 1360, 1369
FaqI GGGAC 3 cut(s) 13, 1090, 1152
FatI CATG 5 cut(s) 547, 1045, 1318, 1356, 1365
FauI CCCGC 1 cut(s) 1559
FbaI TGATCA 1 cut(s) 708
FblI GTMKAC 1 cut(s) 1503
Fnu4HI GCNGC 4 cut(s) 1008, 1260, 1548, 1860
FokI GGATG 4 cut(s) 545, 611, 1016, 1611
Fsp4HI GCNGC 4 cut(s) 1008, 1260, 1548, 1860
FspBI CTAG 8 cut(s) 359, 917, 1035, 1122, 1398, 1770, 1869, 1895
GluI GCNGC 4 cut(s) 1008, 1260, 1548, 1860
GsaI CCCAGC 2 cut(s) 111, 968
HaeIII GGCC 6 cut(s) 350, 414, 1083, 1112, 1645, 1721
HapII CCGG 3 cut(s) 369, 1628, 1715
HgaI GACGC 1 cut(s) 1869
Hin1II CATG 5 cut(s) 551, 1049, 1322, 1360, 1369
HincII GTYRAC 3 cut(s) 313, 424, 1504
HindII GTYRAC 3 cut(s) 313, 424, 1504
HindIII AAGCTT 1 cut(s) 1145
HinfI GANTC 4 cut(s) 314, 830, 1297, 1784
HpaII CCGG 3 cut(s) 369, 1628, 1715
HphI GGTGA 4 cut(s) 350, 718, 1793, 1816
Hpy166II GTNNAC 5 cut(s) 313, 424, 1174, 1504, 1824
Hpy188I TCNGA 4 cut(s) 179, 257, 1296, 1427
Hpy188III TCNNGA 9 cut(s) 197, 610, 872, 897, 1046, 1628, 1791, 1869, 1895
Hpy8I GTNNAC 5 cut(s) 313, 424, 1174, 1504, 1824
Hpy99I CGWCG 1 cut(s) 454
HpyCH4III ACNGT 9 cut(s) 69, 124, 338, 428, 883, 1103, 1640, 1743, 1821
HpyCH4IV ACGT 3 cut(s) 449, 582, 1206
HpyCH4V TGCA 7 cut(s) 83, 805, 990, 1007, 1118, 1259, 1306
HpyF10VI GCNNNNNNNGC 2 cut(s) 411, 970
HpyF3I CTNAG 4 cut(s) 665, 873, 1066, 1286
HpySE526I ACGT 3 cut(s) 449, 582, 1206
Hsp92II CATG 5 cut(s) 551, 1049, 1322, 1360, 1369
Kpn2I TCCGGA 1 cut(s) 1627
Ksp22I TGATCA 1 cut(s) 708
Kzo9I GATC 6 cut(s) 395, 708, 733, 810, 1053, 1630
LguI GCTCTTC 1 cut(s) 1734
LmnI GCTCC 3 cut(s) 216, 822, 1516
Lsp1109I GCAGC 4 cut(s) 1019, 1271, 1559, 1871
LweI GCATC 4 cut(s) 145, 564, 994, 1300
MaeI CTAG 8 cut(s) 359, 917, 1035, 1122, 1398, 1770, 1869, 1895
MaeII ACGT 3 cut(s) 449, 582, 1206
MaeIII GTNAC 9 cut(s) 63, 124, 197, 583, 607, 641, 692, 1381, 1760
MalI GATC 6 cut(s) 397, 710, 735, 812, 1055, 1632
MboI GATC 6 cut(s) 395, 708, 733, 810, 1053, 1630
MfeI CAATTG 3 cut(s) 44, 1341, 1464
MhlI GDGCHC 3 cut(s) 196, 1521, 1624
MlyI GAGTC 2 cut(s) 308, 1793
MmeI TCCRAC 4 cut(s) 202, 280, 342, 892
MroI TCCGGA 1 cut(s) 1627
MseI TTAA 3 cut(s) 135, 1215, 1598
MslI CAYNNNNRTG 3 cut(s) 548, 1476, 1921
MspA1I CMGCKG 1 cut(s) 1285
MspI CCGG 3 cut(s) 369, 1628, 1715
MspR9I CCNGG 4 cut(s) 203, 369, 370, 704
MunI CAATTG 3 cut(s) 44, 1341, 1464
MvaI CCWGG 2 cut(s) 203, 704
MwoI GCNNNNNNNGC 2 cut(s) 411, 970
NciI CCSGG 2 cut(s) 369, 370
NcoI CCATGG 2 cut(s) 1318, 1356
NdeII GATC 6 cut(s) 395, 708, 733, 810, 1053, 1630
NheI GCTAGC 1 cut(s) 1397
NlaIII CATG 5 cut(s) 551, 1049, 1322, 1360, 1369
NlaIV GGNNCC 2 cut(s) 373, 1354
NmuCI GTSAC 4 cut(s) 197, 607, 692, 1760
NspV TTCGAA 1 cut(s) 1680
OliI CACNNNNGTG 1 cut(s) 548
PagI TCATGA 1 cut(s) 1045
PceI AGGCCT 1 cut(s) 1645
PciSI GCTCTTC 1 cut(s) 1734
PcsI WCGNNNNNNNCGW 1 cut(s) 306
PfeI GAWTC 2 cut(s) 830, 1297
PkrI GCNGC 4 cut(s) 1009, 1261, 1549, 1861
PleI GAGTC 2 cut(s) 308, 1792
PpsI GAGTC 2 cut(s) 308, 1792
Ppu21I YACGTR 1 cut(s) 1207
PpuMI RGGWCCY 1 cut(s) 372
PshBI ATTAAT 1 cut(s) 135
PsiI TTATAA 1 cut(s) 504
Psp1406I AACGTT 1 cut(s) 582
Psp5II RGGWCCY 1 cut(s) 372
Psp6I CCWGG 2 cut(s) 201, 702
PspFI CCCAGC 2 cut(s) 107, 964
PspGI CCWGG 2 cut(s) 201, 702
PspN4I GGNNCC 2 cut(s) 373, 1354
PspPI GGNCC 3 cut(s) 372, 1082, 1111
PspPPI RGGWCCY 1 cut(s) 372
PstI CTGCAG 1 cut(s) 992
PstNI CAGNNNCTG 1 cut(s) 1246
PvuII CAGCTG 1 cut(s) 1285
RsaI GTAC 3 cut(s) 430, 457, 1100
RsaNI GTAC 3 cut(s) 429, 456, 1099
RseI CAYNNNNRTG 3 cut(s) 548, 1476, 1921
SalI GTCGAC 1 cut(s) 1502
SapI GCTCTTC 1 cut(s) 1734
SaqAI TTAA 3 cut(s) 135, 1215, 1598
SatI GCNGC 4 cut(s) 1008, 1260, 1548, 1860
Sau3AI GATC 6 cut(s) 395, 708, 733, 810, 1053, 1630
Sau96I GGNCC 3 cut(s) 372, 1082, 1111
ScaI AGTACT 1 cut(s) 457
SchI GAGTC 2 cut(s) 308, 1793
ScrFI CCNGG 4 cut(s) 203, 369, 370, 704
SduI GDGCHC 3 cut(s) 196, 1521, 1624
SfaNI GCATC 4 cut(s) 145, 564, 994, 1300
SfcI CTRYAG 4 cut(s) 120, 988, 1417, 1639
SfuI TTCGAA 1 cut(s) 1680
SinI GGWCC 1 cut(s) 372
SmaI CCCGGG 1 cut(s) 370
SmiMI CAYNNNNRTG 3 cut(s) 548, 1476, 1921
SpeI ACTAGT 2 cut(s) 916, 1121
SseBI AGGCCT 1 cut(s) 1645
SsiI CCGC 3 cut(s) 22, 365, 1566
SspMI CTAG 8 cut(s) 359, 917, 1035, 1122, 1398, 1770, 1869, 1895
StuI AGGCCT 1 cut(s) 1645
StyD4I CCNGG 4 cut(s) 201, 367, 368, 702
StyI CCWWGG 2 cut(s) 1318, 1356
TaaI ACNGT 9 cut(s) 69, 124, 338, 428, 883, 1103, 1640, 1743, 1821
TaiI ACGT 3 cut(s) 452, 585, 1209
TatI WGTACW 1 cut(s) 455
TfiI GAWTC 2 cut(s) 830, 1297
Tru1I TTAA 3 cut(s) 135, 1215, 1598
Tru9I TTAA 3 cut(s) 135, 1215, 1598
TscAI CASTG 3 cut(s) 384, 1108, 1746
TseFI GTSAC 4 cut(s) 197, 607, 692, 1760
TseI GCWGC 4 cut(s) 1007, 1259, 1547, 1859
Tsp45I GTSAC 4 cut(s) 197, 607, 692, 1760
TspDTI ATGAA 6 cut(s) 828, 1034, 1103, 1174, 1211, 1494
TspGWI ACGGA 4 cut(s) 161, 298, 559, 1388
TspMI CCCGGG 1 cut(s) 368
TspRI CASTG 3 cut(s) 384, 1108, 1746
VpaK11BI GGWCC 1 cut(s) 372
VspI ATTAAT 1 cut(s) 135
XapI RAATTY 1 cut(s) 1899
XbaI TCTAGA 2 cut(s) 1868, 1894
XcmI CCANNNNNNNNNTGG 2 cut(s) 209, 1363
XmaI CCCGGG 1 cut(s) 368
XmiI GTMKAC 1 cut(s) 1503
XspI CTAG 8 cut(s) 359, 917, 1035, 1122, 1398, 1770, 1869, 1895
ZrmI AGTACT 1 cut(s) 457
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.