Rh5CG253300

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
26765656 .. 26774809
9154 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG253300.1

Sequence Viewer

Length: 1329 bp
ATGGCTGTCAAAAACACATTCCGATTGTCCCTAAAGCAGTTTCAATTGCTTCTTCTTCTCTTATTACTTTTGCCCTTCTCTGCAACTCCATTGACCTTCAATTTCCCCAGCTTTCCCCTTAATGTTACCGCCAATATATCTATGGAGGGAGATGCTTTGCCCGATGGGTCCCTCCGCCTCACCAAAAGTGCCGTCGATGTTCAAAAGAACCAAAGCGTCGGCCGAGCCACCTATCGCCAACCCTTCCTCCTCCGCCAAAACTCCACCGGAAAACTCGCTGATTTTACATCAAGTTTCACGTTCGCCATTAACTCCGGCAGGAGCCCCAACTTCGGTGATGGGCTGGCCTTCTTCTTAGCGCCGGCGGGGTCCTTACTGAACCCCACATTAGGAGAAGGTAGAAGTCTTGGCCTCCCTGTCAACACTACGCTGGAAAACTATACCATGTGGACTACTGAATACCCGTTTGTGGCGGTCGAGTTTGATATCTTCCCCAATAGTGTCGTTGATTGGGGTGTAAATTACACTCATGTGGGCATCGACATCAACTCCGTCAGGTCTAAAGTTACAGAGCCATGGAATGGTGGTATTATGGCAGGAGATGAAAATAATGCCACAATTAGTTACAACTCCACCTCGAAAAATCTTGGTGTTGCCTTCACTACATTTGAAAACGGAGTCCAGGTGATCAAAAATTTTTCTCTCTCAGCTGATCTGCTCCAATACTTGCCCGATACGGTCATCGTTGGGTTCTCGGCCGCAACAGGTAGTTCGACTGCTCTGCATAAGATCAATTCTTGGAGCTTTGATTCAACTTCATTGGTAGATGAAAACAGCACATCAATTCCTCCTGACCCAACGGTCAAACCCAACTCAGGAAATGCCAATGTTGGACTAGTAGTTGGATTGGTTGTTGGGGGAGGTGTTAGCGTGGCTGGTGTATTGGGTTTGCTTTGGTTCGTCTTCTGCAGGAAGAGGAAGGAAACAGCTGATGAAAGTAGCGATGATGATACTAGGATACTTCATGATTTGATCCCTGAAGAATTCGAAAAGGGGACAGGCCCTAGGAAGTTTTCGTACAATGAATTGGCCCTTGCAACTAGATTTGTGGAGCGGCGCGTCTTCCTGATCCGTCGCGACCTATACCTACTCCTTACTGTCGTGTTCCGTCTATGGGCTCTTGGTGGAGTAGGCGACATCTTCTGGGCAGATGACGCCTCTTCTTGTGGCGGCATGGCGAAGGCTTGGTGCGACACCGGCGGCTGGGCCAATTGTCGGGATGCTTTGGGTGCTAGCAGATGTTGCTCCTTAATGGAACGAAGAATATAG

Protein Analysis

442

Amino Acids

48.1

Weight (kDa)

5.42

Isoelectric Point (pI)

29.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 31 - 278 7.7e-59 Legume lectin domain
Lectin_L-type_dom PF18483 43 - 265 7.8e-06 Legume lectin beta-barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 860
AccB7I CCANNNNNTGG 1 cut(s) 581
AccBSI CCGCTC 1 cut(s) 1114
AccII CGCG 2 cut(s) 1119, 1137
AciI CCGC 9 cut(s) 129, 175, 253, 365, 473, 759, 1114, 1230, 1260
AclWI GGATC 2 cut(s) 1027, 1123
AcoI YGGCCR 2 cut(s) 220, 756
AcsI RAATTY 2 cut(s) 694, 1043
AcuI CTGAAG 1 cut(s) 1059
AcyI GRCGYC 1 cut(s) 1215
AfaI GTAC 1 cut(s) 1079
AfiI CCNNNNNNNGG 8 cut(s) 332, 389, 469, 581, 875, 1174, 1263, 1275
AgsI TTSAA 5 cut(s) 44, 100, 203, 671, 813
AhlI ACTAGT 1 cut(s) 895
AjnI CCWGG 1 cut(s) 681
AleI CACNNNNGTG 1 cut(s) 530
AluBI AGCT 4 cut(s) 111, 710, 804, 989
AluI AGCT 4 cut(s) 111, 710, 804, 989
AlwI GGATC 2 cut(s) 1027, 1123
AoxI GGCC 7 cut(s) 220, 345, 409, 756, 1060, 1089, 1266
ApoI RAATTY 2 cut(s) 694, 1043
ArsI GACNNNNNNTTYG 2 cut(s) 177, 209
AspA2I CCTAGG 1 cut(s) 1064
AspLEI GCGC 2 cut(s) 361, 1119
AspS9I GGNCC 5 cut(s) 168, 369, 1061, 1090, 1266
AsuHPI GGTGA 3 cut(s) 172, 347, 697
AsuII TTCGAA 1 cut(s) 1047
AsuNHI GCTAGC 1 cut(s) 1292
AvaII GGWCC 2 cut(s) 168, 369
AvrII CCTAGG 1 cut(s) 1064
BanII GRGCYC 2 cut(s) 326, 1180
BarI GAAGNNNNNNTAC 2 cut(s) 1061, 1093
BbsI GAAGAC 2 cut(s) 955, 1114
BccI CCATC 2 cut(s) 158, 332
BceAI ACGGC 1 cut(s) 176
BcgI CGANNNNNNTGC 2 cut(s) 763, 797
BciT130I CCWGG 1 cut(s) 683
BciVI GTATCC 1 cut(s) 1011
BclI TGATCA 1 cut(s) 687
BcuI ACTAGT 1 cut(s) 895
BfaI CTAG 5 cut(s) 896, 1014, 1065, 1101, 1293
BfmI CTRYAG 1 cut(s) 967
BfoI RGCGCY 1 cut(s) 362
BfuI GTATCC 1 cut(s) 1011
BisI GCNGC 4 cut(s) 759, 1115, 1231, 1261
BlnI CCTAGG 1 cut(s) 1064
BlsI GCNGC 4 cut(s) 760, 1116, 1232, 1262
Bme1390I CCNGG 1 cut(s) 683
Bme18I GGWCC 2 cut(s) 168, 369
BmgT120I GGNCC 5 cut(s) 168, 369, 1061, 1090, 1266
BmiI GGNNCC 4 cut(s) 169, 170, 323, 370
BmrFI CCNGG 1 cut(s) 683
BmsI GCATC 3 cut(s) 142, 546, 1270
BmtI GCTAGC 1 cut(s) 1296
BpiI GAAGAC 2 cut(s) 955, 1114
Bpu14I TTCGAA 1 cut(s) 1047
BsaHI GRCGYC 1 cut(s) 1215
BsaJI CCNNGG 2 cut(s) 575, 1064
BsaWI WCCGGW 1 cut(s) 266
BsaXI ACNNNNNCTCC 6 cut(s) 231, 261, 533, 563, 669, 699
Bsc4I CCNNNNNNNGG 8 cut(s) 332, 389, 469, 581, 875, 1174, 1263, 1275
Bse118I RCCGGY 2 cut(s) 361, 1256
BseBI CCWGG 1 cut(s) 683
BseDI CCNNGG 2 cut(s) 575, 1064
BseGI GGATG 1 cut(s) 1285
BseLI CCNNNNNNNGG 8 cut(s) 332, 389, 469, 581, 875, 1174, 1263, 1275
BseMII CTCAG 2 cut(s) 720, 888
BseRI GAGGAG 1 cut(s) 239
BseX3I CGGCCG 2 cut(s) 220, 756
BseYI CCCAGC 2 cut(s) 107, 1263
Bsh1236I CGCG 2 cut(s) 1119, 1137
Bsh1285I CGRYCG 3 cut(s) 223, 477, 759
BshFI GGCC 7 cut(s) 222, 347, 411, 758, 1062, 1091, 1268
BsiEI CGRYCG 3 cut(s) 223, 477, 759
BsiSI CCGG 4 cut(s) 267, 315, 362, 1257
BslFI GGGAC 3 cut(s) 13, 154, 1069
BslI CCNNNNNNNGG 8 cut(s) 332, 389, 469, 581, 875, 1174, 1263, 1275
BsmFI GGGAC 3 cut(s) 13, 154, 1069
BsnI GGCC 7 cut(s) 222, 347, 411, 758, 1062, 1091, 1268
Bsp119I TTCGAA 1 cut(s) 1047
Bsp1286I GDGCHC 2 cut(s) 326, 1180
Bsp143I GATC 5 cut(s) 687, 712, 789, 1032, 1128
Bsp19I CCATGG 1 cut(s) 575
Bsp68I TCGCGA 1 cut(s) 1137
BspACI CCGC 9 cut(s) 129, 175, 253, 365, 473, 759, 1114, 1230, 1260
BspANI GGCC 7 cut(s) 222, 347, 411, 758, 1062, 1091, 1268
BspCNI CTCAG 2 cut(s) 719, 887
BspFNI CGCG 2 cut(s) 1119, 1137
BspHI TCATGA 1 cut(s) 1024
BspLI GGNNCC 4 cut(s) 169, 170, 323, 370
BspMAI CTGCAG 1 cut(s) 971
BspOI GCTAGC 1 cut(s) 1296
BspPI GGATC 2 cut(s) 1027, 1123
BspT104I TTCGAA 1 cut(s) 1047
BsrBI CCGCTC 1 cut(s) 1114
BsrFI RCCGGY 2 cut(s) 361, 1256
BssAI RCCGGY 2 cut(s) 361, 1256
BssECI CCNNGG 2 cut(s) 575, 1064
BssMI GATC 5 cut(s) 687, 712, 789, 1032, 1128
BssNI GRCGYC 1 cut(s) 1215
BssT1I CCWWGG 2 cut(s) 575, 1064
Bst2UI CCWGG 1 cut(s) 683
Bst4CI ACNGT 3 cut(s) 739, 862, 1159
Bst6I CTCTTC 2 cut(s) 968, 1225
BstACI GRCGYC 1 cut(s) 1215
BstAPI GCANNNNNTGC 1 cut(s) 1302
BstBI TTCGAA 1 cut(s) 1047
BstC8I GCNNGC 3 cut(s) 345, 363, 1294
BstDEI CTNAG 3 cut(s) 355, 706, 874
BstDSI CCRYGG 1 cut(s) 575
BstF5I GGATG 1 cut(s) 1285
BstFNI CGCG 2 cut(s) 1119, 1137
BstH2I RGCGCY 1 cut(s) 362
BstHHI GCGC 2 cut(s) 361, 1119
BstKTI GATC 5 cut(s) 690, 715, 792, 1035, 1131
BstMBI GATC 5 cut(s) 687, 712, 789, 1032, 1128
BstMCI CGRYCG 3 cut(s) 223, 477, 759
BstMWI GCNNNNNNNGC 4 cut(s) 1214, 1257, 1289, 1302
BstNI CCWGG 1 cut(s) 683
BstSCI CCNGG 1 cut(s) 681
BstSFI CTRYAG 1 cut(s) 967
BstUI CGCG 2 cut(s) 1119, 1137
BstV2I GAAGAC 2 cut(s) 955, 1114
BstZI CGGCCG 2 cut(s) 220, 756
BsuI GTATCC 1 cut(s) 1011
BsuRI GGCC 7 cut(s) 222, 347, 411, 758, 1062, 1091, 1268
BtgI CCRYGG 1 cut(s) 575
BtgZI GCGATG 1 cut(s) 1017
BtsCI GGATG 1 cut(s) 1285
BtuMI TCGCGA 1 cut(s) 1137
Cac8I GCNNGC 3 cut(s) 345, 363, 1294
CciI TCATGA 1 cut(s) 1024
CfoI GCGC 2 cut(s) 361, 1119
Cfr10I RCCGGY 2 cut(s) 361, 1256
Cfr13I GGNCC 5 cut(s) 168, 369, 1061, 1090, 1266
CseI GACGC 3 cut(s) 205, 1108, 1223
Csp6I GTAC 1 cut(s) 1078
CviAII CATG 5 cut(s) 445, 530, 576, 1025, 1234
CviQI GTAC 1 cut(s) 1078
DdeI CTNAG 3 cut(s) 355, 706, 874
DpnI GATC 5 cut(s) 689, 714, 791, 1034, 1130
DpnII GATC 5 cut(s) 687, 712, 789, 1032, 1128
DrdI GACNNNNNNGTC 1 cut(s) 860
DseDI GACNNNNNNGTC 1 cut(s) 860
EaeI YGGCCR 2 cut(s) 220, 756
EagI CGGCCG 2 cut(s) 220, 756
Eam1104I CTCTTC 2 cut(s) 968, 1225
EarI CTCTTC 2 cut(s) 968, 1225
EciI GGCGGA 2 cut(s) 164, 242
EclXI CGGCCG 2 cut(s) 220, 756
Eco130I CCWWGG 2 cut(s) 575, 1064
Eco24I GRGCYC 2 cut(s) 326, 1180
Eco32I GATATC 1 cut(s) 487
Eco47I GGWCC 2 cut(s) 168, 369
Eco52I CGGCCG 2 cut(s) 220, 756
Eco57I CTGAAG 1 cut(s) 1059
EcoO109I RGGNCCY 3 cut(s) 168, 369, 1061
EcoRI GAATTC 1 cut(s) 1043
EcoRII CCWGG 1 cut(s) 681
EcoRV GATATC 1 cut(s) 487
EcoT14I CCWWGG 2 cut(s) 575, 1064
EcoT38I GRGCYC 2 cut(s) 326, 1180
ErhI CCWWGG 2 cut(s) 575, 1064
FaeI CATG 5 cut(s) 448, 533, 579, 1028, 1237
FaqI GGGAC 3 cut(s) 13, 154, 1069
FatI CATG 5 cut(s) 444, 529, 575, 1024, 1233
FauI CCCGC 1 cut(s) 358
FbaI TGATCA 1 cut(s) 687
Fnu4HI GCNGC 4 cut(s) 759, 1115, 1231, 1261
FokI GGATG 1 cut(s) 1292
FriOI GRGCYC 2 cut(s) 326, 1180
Fsp4HI GCNGC 4 cut(s) 759, 1115, 1231, 1261
FspBI CTAG 5 cut(s) 896, 1014, 1065, 1101, 1293
GlaI GCGC 2 cut(s) 360, 1118
GluI GCNGC 4 cut(s) 759, 1115, 1231, 1261
GsaI CCCAGC 2 cut(s) 111, 1267
HaeII RGCGCY 1 cut(s) 362
HaeIII GGCC 7 cut(s) 222, 347, 411, 758, 1062, 1091, 1268
HapII CCGG 4 cut(s) 267, 315, 362, 1257
HgaI GACGC 3 cut(s) 205, 1108, 1223
HhaI GCGC 2 cut(s) 361, 1119
Hin1I GRCGYC 1 cut(s) 1215
Hin1II CATG 5 cut(s) 448, 533, 579, 1028, 1237
Hin6I GCGC 2 cut(s) 359, 1117
HinP1I GCGC 2 cut(s) 359, 1117
HincII GTYRAC 1 cut(s) 421
HindII GTYRAC 1 cut(s) 421
HinfI GANTC 2 cut(s) 678, 809
HpaII CCGG 4 cut(s) 267, 315, 362, 1257
HphI GGTGA 3 cut(s) 172, 347, 697
Hpy166II GTNNAC 2 cut(s) 421, 450
Hpy188I TCNGA 1 cut(s) 23
Hpy188III TCNNGA 6 cut(s) 851, 876, 1025, 1126, 1136, 1277
Hpy8I GTNNAC 2 cut(s) 421, 450
Hpy99I CGWCG 3 cut(s) 197, 221, 1137
HpyAV CCTTC 8 cut(s) 85, 106, 253, 358, 389, 667, 973, 1234
HpyCH4III ACNGT 3 cut(s) 739, 862, 1159
HpyCH4IV ACGT 1 cut(s) 299
HpyCH4V TGCA 4 cut(s) 83, 784, 969, 1097
HpyF10VI GCNNNNNNNGC 4 cut(s) 1214, 1257, 1289, 1302
HpyF3I CTNAG 3 cut(s) 355, 706, 874
HpySE526I ACGT 1 cut(s) 299
Hsp92I GRCGYC 1 cut(s) 1215
Hsp92II CATG 5 cut(s) 448, 533, 579, 1028, 1237
HspAI GCGC 2 cut(s) 359, 1117
KflI GGGWCCC 1 cut(s) 168
KroI GCCGGC 1 cut(s) 361
KroNI GCCGGC 1 cut(s) 363
Ksp22I TGATCA 1 cut(s) 687
Kzo9I GATC 5 cut(s) 687, 712, 789, 1032, 1128
LmnI GCTCC 5 cut(s) 321, 723, 801, 1111, 1310
LweI GCATC 3 cut(s) 142, 546, 1270
MaeI CTAG 5 cut(s) 896, 1014, 1065, 1101, 1293
MaeII ACGT 1 cut(s) 299
MaeIII GTNAC 3 cut(s) 124, 565, 623
MalI GATC 5 cut(s) 689, 714, 791, 1034, 1130
MbiI CCGCTC 1 cut(s) 1114
MboI GATC 5 cut(s) 687, 712, 789, 1032, 1128
MfeI CAATTG 2 cut(s) 44, 1270
MhlI GDGCHC 2 cut(s) 326, 1180
MlyI GAGTC 1 cut(s) 687
MmeI TCCRAC 2 cut(s) 871, 883
MreI CGCCGGCG 1 cut(s) 361
MroNI GCCGGC 1 cut(s) 361
MseI TTAA 3 cut(s) 120, 309, 1310
MslI CAYNNNNRTG 1 cut(s) 530
MspA1I CMGCKG 2 cut(s) 710, 989
MspI CCGG 4 cut(s) 267, 315, 362, 1257
MspR9I CCNGG 1 cut(s) 683
MunI CAATTG 2 cut(s) 44, 1270
MvaI CCWGG 1 cut(s) 683
MvnI CGCG 2 cut(s) 1119, 1137
MwoI GCNNNNNNNGC 4 cut(s) 1214, 1257, 1289, 1302
NaeI GCCGGC 1 cut(s) 363
NcoI CCATGG 1 cut(s) 575
NdeII GATC 5 cut(s) 687, 712, 789, 1032, 1128
NgoMIV GCCGGC 1 cut(s) 361
NheI GCTAGC 1 cut(s) 1292
NlaIII CATG 5 cut(s) 448, 533, 579, 1028, 1237
NlaIV GGNNCC 4 cut(s) 169, 170, 323, 370
NmeAIII GCCGAG 2 cut(s) 248, 734
NruI TCGCGA 1 cut(s) 1137
NspV TTCGAA 1 cut(s) 1047
OliI CACNNNNGTG 1 cut(s) 530
PagI TCATGA 1 cut(s) 1024
PdiI GCCGGC 1 cut(s) 363
PfeI GAWTC 1 cut(s) 809
PflMI CCANNNNNTGG 1 cut(s) 581
PkrI GCNGC 4 cut(s) 760, 1116, 1232, 1262
PleI GAGTC 1 cut(s) 686
PpsI GAGTC 1 cut(s) 686
PpuMI RGGWCCY 2 cut(s) 168, 369
Psp5II RGGWCCY 2 cut(s) 168, 369
Psp6I CCWGG 1 cut(s) 681
PspFI CCCAGC 2 cut(s) 107, 1263
PspGI CCWGG 1 cut(s) 681
PspN4I GGNNCC 4 cut(s) 169, 170, 323, 370
PspPI GGNCC 5 cut(s) 168, 369, 1061, 1090, 1266
PspPPI RGGWCCY 2 cut(s) 168, 369
PstI CTGCAG 1 cut(s) 971
PvuII CAGCTG 2 cut(s) 710, 989
RruI TCGCGA 1 cut(s) 1137
RsaI GTAC 1 cut(s) 1079
RsaNI GTAC 1 cut(s) 1078
RseI CAYNNNNRTG 1 cut(s) 530
SaqAI TTAA 3 cut(s) 120, 309, 1310
SatI GCNGC 4 cut(s) 759, 1115, 1231, 1261
Sau3AI GATC 5 cut(s) 687, 712, 789, 1032, 1128
Sau96I GGNCC 5 cut(s) 168, 369, 1061, 1090, 1266
SchI GAGTC 1 cut(s) 687
ScrFI CCNGG 1 cut(s) 683
SduI GDGCHC 2 cut(s) 326, 1180
SfaNI GCATC 3 cut(s) 142, 546, 1270
SfcI CTRYAG 1 cut(s) 967
SfuI TTCGAA 1 cut(s) 1047
SgrAI CRCCGGYG 2 cut(s) 361, 1256
SinI GGWCC 2 cut(s) 168, 369
SmiMI CAYNNNNRTG 1 cut(s) 530
SpeI ACTAGT 1 cut(s) 895
SsiI CCGC 9 cut(s) 129, 175, 253, 365, 473, 759, 1114, 1230, 1260
SspMI CTAG 5 cut(s) 896, 1014, 1065, 1101, 1293
StyD4I CCNGG 1 cut(s) 681
StyI CCWWGG 2 cut(s) 575, 1064
TaaI ACNGT 3 cut(s) 739, 862, 1159
TaiI ACGT 1 cut(s) 302
TaqI TCGA 6 cut(s) 195, 477, 540, 638, 773, 1047
TauI GCSGC 4 cut(s) 761, 1117, 1233, 1263
TfiI GAWTC 1 cut(s) 809
Tru1I TTAA 3 cut(s) 120, 309, 1310
Tru9I TTAA 3 cut(s) 120, 309, 1310
TspDTI ATGAA 6 cut(s) 618, 807, 843, 1008, 1013, 1098
TspGWI ACGGA 4 cut(s) 541, 690, 1121, 1157
Van91I CCANNNNNTGG 1 cut(s) 581
VpaK11BI GGWCC 2 cut(s) 168, 369
XapI RAATTY 2 cut(s) 694, 1043
XcmI CCANNNNNNNNNTGG 1 cut(s) 139
XmaJI CCTAGG 1 cut(s) 1064
XspI CTAG 5 cut(s) 896, 1014, 1065, 1101, 1293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.