transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08500 |
| fragaria_vesca | FvH4_7g01020 |
| malus_domestica | MD02G1312700.v1.1 MD07G1010500.v1.1 |
| prunus_persica | Prupe.2G012800_v2.0.a1 |
| pyrus_communis | pycom02g26240 pycom07g00860 |
| rosa_chinensis | RchiOBHm_Chr1g0315931 |
| rosa_laevigata | RLG00000030722 |
| rosa_multiflora | Rmu_ssc0000154.1_g000025 |
| rosa_roxburghii | Rroxscaffold_4G00331300 |
| rosa_rugosa | Rorug01G0007100 |
| rosa_samantha | Rh1AG017900 Rh1BG010900 Rh1CG015200 Rh1DG010900 |
| rosa_wichuraiana | Rw1G001090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 447 |
| AfaI | GTAC | 1 cut(s) | 38 |
| AflII | CTTAAG | 1 cut(s) | 442 |
| AflIII | ACRYGT | 1 cut(s) | 18 |
| AhlI | ACTAGT | 1 cut(s) | 263 |
| AluBI | AGCT | 5 cut(s) | 169, 390, 425, 431, 441 |
| AluI | AGCT | 5 cut(s) | 169, 390, 425, 431, 441 |
| Alw26I | GTCTC | 1 cut(s) | 254 |
| AsuHPI | GGTGA | 1 cut(s) | 248 |
| BbsI | GAAGAC | 1 cut(s) | 239 |
| BbvCI | CCTCAGC | 1 cut(s) | 64 |
| BceAI | ACGGC | 1 cut(s) | 390 |
| BcoDI | GTCTC | 1 cut(s) | 254 |
| BcuI | ACTAGT | 1 cut(s) | 263 |
| BfaI | CTAG | 1 cut(s) | 264 |
| BfrI | CTTAAG | 1 cut(s) | 442 |
| BmsI | GCATC | 1 cut(s) | 77 |
| BpiI | GAAGAC | 1 cut(s) | 239 |
| BpmI | CTGGAG | 1 cut(s) | 453 |
| Bpu10I | CCTNAGC | 1 cut(s) | 64 |
| BpuEI | CTTGAG | 1 cut(s) | 278 |
| BsaAI | YACGTR | 2 cut(s) | 145, 205 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 85, 115 |
| BseGI | GGATG | 2 cut(s) | 59, 68 |
| BseMII | CTCAG | 1 cut(s) | 78 |
| BslFI | GGGAC | 1 cut(s) | 422 |
| BsmAI | GTCTC | 1 cut(s) | 254 |
| BsmFI | GGGAC | 1 cut(s) | 422 |
| Bsp1407I | TGTACA | 1 cut(s) | 36 |
| Bsp143I | GATC | 1 cut(s) | 238 |
| BspCNI | CTCAG | 1 cut(s) | 77 |
| BspTI | CTTAAG | 1 cut(s) | 442 |
| BsrGI | TGTACA | 1 cut(s) | 36 |
| BssMI | GATC | 1 cut(s) | 238 |
| Bst4CI | ACNGT | 1 cut(s) | 125 |
| BstAFI | CTTAAG | 1 cut(s) | 442 |
| BstAUI | TGTACA | 1 cut(s) | 36 |
| BstBAI | YACGTR | 2 cut(s) | 145, 205 |
| BstC8I | GCNNGC | 1 cut(s) | 423 |
| BstDEI | CTNAG | 2 cut(s) | 64, 504 |
| BstF5I | GGATG | 2 cut(s) | 59, 68 |
| BstKTI | GATC | 1 cut(s) | 241 |
| BstMAI | GTCTC | 1 cut(s) | 254 |
| BstMBI | GATC | 1 cut(s) | 238 |
| BstNSI | RCATGY | 1 cut(s) | 22 |
| BstV2I | GAAGAC | 1 cut(s) | 239 |
| BtsCI | GGATG | 2 cut(s) | 59, 68 |
| Cac8I | GCNNGC | 1 cut(s) | 423 |
| Csp6I | GTAC | 1 cut(s) | 37 |
| CviAII | CATG | 6 cut(s) | 14, 19, 31, 40, 73, 478 |
| CviJI | RGCY | 7 cut(s) | 159, 169, 212, 390, 425, 431, 441 |
| CviKI_1 | RGCY | 7 cut(s) | 159, 169, 212, 390, 425, 431, 441 |
| CviQI | GTAC | 1 cut(s) | 37 |
| DdeI | CTNAG | 2 cut(s) | 64, 504 |
| DpnI | GATC | 1 cut(s) | 240 |
| DpnII | GATC | 1 cut(s) | 238 |
| DraI | TTTAAA | 1 cut(s) | 394 |
| Eco57I | CTGAAG | 1 cut(s) | 447 |
| FaeI | CATG | 6 cut(s) | 17, 22, 34, 43, 76, 481 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 225, 257 |
| FaqI | GGGAC | 1 cut(s) | 422 |
| FatI | CATG | 6 cut(s) | 13, 18, 30, 39, 72, 477 |
| FokI | GGATG | 2 cut(s) | 46, 55 |
| FspBI | CTAG | 1 cut(s) | 264 |
| GsuI | CTGGAG | 1 cut(s) | 453 |
| Hin1II | CATG | 6 cut(s) | 17, 22, 34, 43, 76, 481 |
| HincII | GTYRAC | 1 cut(s) | 307 |
| HindII | GTYRAC | 1 cut(s) | 307 |
| HindIII | AAGCTT | 1 cut(s) | 439 |
| HinfI | GANTC | 2 cut(s) | 44, 148 |
| HphI | GGTGA | 1 cut(s) | 248 |
| Hpy166II | GTNNAC | 1 cut(s) | 307 |
| Hpy188III | TCNNGA | 1 cut(s) | 257 |
| Hpy8I | GTNNAC | 1 cut(s) | 307 |
| HpyAV | CCTTC | 2 cut(s) | 170, 227 |
| HpyCH4III | ACNGT | 1 cut(s) | 125 |
| HpyCH4IV | ACGT | 2 cut(s) | 144, 204 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 76, 481 |
| HpyF3I | CTNAG | 2 cut(s) | 64, 504 |
| HpySE526I | ACGT | 2 cut(s) | 144, 204 |
| Hsp92II | CATG | 6 cut(s) | 17, 22, 34, 43, 76, 481 |
| Kzo9I | GATC | 1 cut(s) | 238 |
| LmnI | GCTCC | 1 cut(s) | 106 |
| LpnPI | CCDG | 4 cut(s) | 141, 186, 198, 417 |
| LweI | GCATC | 1 cut(s) | 77 |
| MaeI | CTAG | 1 cut(s) | 264 |
| MaeII | ACGT | 2 cut(s) | 144, 204 |
| MalI | GATC | 1 cut(s) | 240 |
| MboI | GATC | 1 cut(s) | 238 |
| MboII | GAAGA | 3 cut(s) | 239, 282, 467 |
| MluCI | AATT | 2 cut(s) | 199, 358 |
| MlyI | GAGTC | 1 cut(s) | 38 |
| MmeI | TCCRAC | 1 cut(s) | 430 |
| MnlI | CCTC | 7 cut(s) | 67, 73, 139, 202, 261, 428, 463 |
| MseI | TTAA | 3 cut(s) | 278, 393, 443 |
| MslI | CAYNNNNRTG | 1 cut(s) | 23 |
| MspCI | CTTAAG | 1 cut(s) | 442 |
| NdeII | GATC | 1 cut(s) | 238 |
| NlaIII | CATG | 6 cut(s) | 17, 22, 34, 43, 76, 481 |
| NspI | RCATGY | 1 cut(s) | 22 |
| PciI | ACATGT | 1 cut(s) | 18 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 201 |
| PfeI | GAWTC | 1 cut(s) | 148 |
| PleI | GAGTC | 1 cut(s) | 38 |
| PpsI | GAGTC | 1 cut(s) | 38 |
| Ppu21I | YACGTR | 2 cut(s) | 145, 205 |
| PscI | ACATGT | 1 cut(s) | 18 |
| RsaI | GTAC | 1 cut(s) | 38 |
| RsaNI | GTAC | 1 cut(s) | 37 |
| RseI | CAYNNNNRTG | 1 cut(s) | 23 |
| SaqAI | TTAA | 3 cut(s) | 278, 393, 443 |
| Sau3AI | GATC | 1 cut(s) | 238 |
| SchI | GAGTC | 1 cut(s) | 38 |
| SetI | ASST | 8 cut(s) | 147, 171, 207, 238, 392, 427, 433, 443 |
| SfaNI | GCATC | 1 cut(s) | 77 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 23 |
| SmlI | CTYRAG | 2 cut(s) | 257, 442 |
| SmoI | CTYRAG | 2 cut(s) | 257, 442 |
| SpeI | ACTAGT | 1 cut(s) | 263 |
| Sse9I | AATT | 2 cut(s) | 199, 358 |
| SspMI | CTAG | 1 cut(s) | 264 |
| TaaI | ACNGT | 1 cut(s) | 125 |
| TaiI | ACGT | 2 cut(s) | 147, 207 |
| TasI | AATT | 2 cut(s) | 199, 358 |
| TatI | WGTACW | 1 cut(s) | 36 |
| TfiI | GAWTC | 1 cut(s) | 148 |
| Tru1I | TTAA | 3 cut(s) | 278, 393, 443 |
| Tru9I | TTAA | 3 cut(s) | 278, 393, 443 |
| TspDTI | ATGAA | 2 cut(s) | 24, 466 |
| TspGWI | ACGGA | 1 cut(s) | 210 |
| Vha464I | CTTAAG | 1 cut(s) | 442 |
| XceI | RCATGY | 1 cut(s) | 22 |
| XspI | CTAG | 1 cut(s) | 264 |