Rroxscaffold_5G00346030

Adagio protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0004937
Physical Location & Seq
Forward (+)
16704001 .. 16709797
5797 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00346030.1

Sequence Viewer

Length: 1875 bp
ATGGAGTGGGACAGCGATTCGGATCTGAGCGCCGAGGAGGAGGAGGAGGAGGAAGATGGGGAGGTCAGCTCTTCCATGTTCGACGACGACGACGCCGCTGGCCCGGGACCGCTTCCCTTCCCCGTCGAGAATTTGCTCCAAACGGCGCCGTGCGGGATTGTTGTTACCGACGCCATCGACCCTGATCATCCTATCATCTACGTCAACACCGTATTTGAGATGGTCACCGGATACCGAGCCGAGGAGGTCCTCGGTCGCAACTGCCGATTTTTGCAATATAGAGGGCCATTTGCCAAAAGAAGGCATCCACTAGTGGATTCTGCTGTAGTTTCAGAAATCAAAAGATGTCTGCAGGAGGGCATTGAATTCCAAGGAGAGTTGTTAAACTTTAGGAAAGATGGATCTCCAATGATGAATAGGTTGCGGCTGACACCTATATATGGGGATGATGATGTGATAAGCCATGTCATTGGAATTCAGTTCTTCACGGAGGTAGATATTGATCTAGGTCCAGTGCCTGGTACCACAATCAAGGAGTCTGCAAAATCTTCTGATCGGTTTCATGCTTGTCTTTCCGCTTTTCGTCCTGGATTGCCTCTGGGGGAGCGTAATATTTGTCGTGGAGTTTGTGGGATATTGCAATTGAGTGATGAGGTTATTGCTCTCAAGATATTATCTAACTTGACGCCTAGAGACATTGCATCTGTTGGGTCAGTCTGTAGGCGACTCTATGAGCTTACGAAGAATGAGGACCTTTGGAGAGTGGTCTGCCAGAATGCATGGGGTAGTGAAACAACCCGTGTTTTACAGGCTGTGCCAGGTGCAAAGAGGCTAGGTTGGGGTAGGCTGGCACGTGAACTGACCACTCTTGAAGCAGCGACGTGGAGAAAGGTCACCGTTGGAGGTGCTGTGGAACCCTCACGCTGTAACTTTAGTGCTTGTGCAGTTGGTAATCGTGTAGTTCTTTTCGGTGGTGAAGGCGTTAATATGCAACCAATGAATGACACCTTCGTATTGGATCTGAATGCCAATAACCCAGAGTGGCAGCATGTCCAAGTGAGCTCCCCTCCTCCTGGTCGTTGGGGCCATACACTTTCTTGTGTGAATGGGTCACATTTGGTGGTATTTGGAGGCTGTGGCAGGCAGGGTTTGCTAAATGATGTTTTTGTACTGGATTTGGATGCAAAACCTCCAACGTGGCGTGAAATATCTGGGTTGGCTCCTCCTCTTCCAAGATCATGGCACAGTTCCTGCACTCTTGATGGCACCAAGTTGATAGTTTCAGGTGGTTGTGCAGACTCCGGAGTCCTTCTCAGTGATACCTTTTTGCTTGATCTCTCGATGGAAAGACCTGTCTGGAGAGAGATACCAGTAGCATGGAAGCCCCCTTCCAGATTAGGTCACACCCTGTCTGTATATGGTGGTAGGAAGATTTTGATGTTTGGGGGCCTTGCCAAGAGTGGGCCACTTCGGTTTCGTTCGAGTGATGTTTTTACAATGGACCTGAGTGAGGACGAACCATGCTGGAGGTGTGTCACTGGAGGTGGAATGCCCGGTTCTGGAAATCCAGGAGGAATGGCTCCTCCTCCTAGACTTGATCATGTCGCTGTGAGCCTCCCAGGTGGGAGAATCTTGATCTTTGGTGGGTCTGTTGCTGGTCTTCACTCTGCTTCACAACTTTATCTTCTGGATCCAACTGATGAGAAACCTACATGGAGAATATTAAATGTACCGGGGCGGCCCCCAAGATTCGCCTGGGGACACAGCACGTGTGTTGTTGGAGGGACAAGGGCAATTGTCCTTGGTGGTCAAACTGGAGAAGAGTGGATGTTAAGTGAGCTTCATGAGCTTTCACTAGCAAACTCTGTAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
F-box-like Kelch_2 Kelch_4 PAS_9

Protein Analysis

624

Amino Acids

67.9

Weight (kDa)

5.22

Isoelectric Point (pI)

42.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS PF00989 43 - 159 5.5e-09 PAS fold
PAS_9 PF13426 50 - 160 2.6e-16 PAS domain
PAS_3 PF08447 65 - 159 5.1e-07 PAS fold
F-box-like PF12937 220 - 258 3.3e-10 F-box-like
Kelch_KLHDC2_KLHL20_DRC7 PF24681 289 - 483 2.7e-37 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_ATRN-LZTR1 PF24981 290 - 432 1.2e-10 Attractin/LZTR1 beta-propeller
Beta-prop_FBX42 PF13415 291 - 448 1.3e-26 FBX42, beta-propeller domain
Beta-prop_TYW4 PF13418 307 - 503 9.1e-09 tRNA wybutosine-synthesizing protein 4, beta-propeller
Kelch_HCF PF13854 346 - 604 6e-14 Host cell factor, Kelch-repeats domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 448 - 621 9.2e-19 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42 PF13415 453 - 620 4.1e-15 FBX42, beta-propeller domain
Kelch_2 PF07646 532 - 579 2.8e-06 Kelch motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1304
Acc65I GGTACC 1 cut(s) 521
AccB1I GGYRCC 3 cut(s) 145, 521, 1265
AccB7I CCANNNNNTGG 1 cut(s) 518
AccIII TCCGGA 1 cut(s) 1301
AciI CCGC 6 cut(s) 96, 110, 153, 424, 576, 1738
AclWI GGATC 5 cut(s) 30, 409, 1026, 1685, 1698
AcsI RAATTY 3 cut(s) 130, 365, 474
AcvI CACGTG 2 cut(s) 854, 1770
AcyI GRCGYC 4 cut(s) 93, 146, 171, 686
AfaI GTAC 3 cut(s) 523, 1170, 1731
AfiI CCNNNNNNNGG 8 cut(s) 241, 300, 440, 518, 1073, 1461, 1510, 1559
AflIII ACRYGT 1 cut(s) 1769
AgsI TTSAA 2 cut(s) 365, 872
AhlI ACTAGT 1 cut(s) 310
AjiI CACGTC 1 cut(s) 882
AjnI CCWGG 7 cut(s) 517, 586, 817, 1072, 1567, 1618, 1754
AluBI AGCT 5 cut(s) 69, 736, 1062, 1840, 1849
AluI AGCT 5 cut(s) 69, 736, 1062, 1840, 1849
Alw21I GWGCWC 1 cut(s) 1064
Alw26I GTCTC 1 cut(s) 687
AlwI GGATC 5 cut(s) 30, 409, 1026, 1685, 1698
AlwNI CAGNNNCTG 2 cut(s) 518, 1251
Ama87I CYCGRG 1 cut(s) 103
Aor13HI TCCGGA 1 cut(s) 1301
AoxI GGCC 6 cut(s) 100, 284, 1084, 1447, 1463, 1739
ApeKI GCWGC 2 cut(s) 875, 1045
ApoI RAATTY 3 cut(s) 130, 365, 474
Asp718I GGTACC 1 cut(s) 521
AspLEI GCGC 2 cut(s) 32, 148
AsuC2I CCSGG 4 cut(s) 104, 105, 1554, 1734
AsuHPI GGTGA 3 cut(s) 217, 886, 986
AvaI CYCGRG 1 cut(s) 103
AvaII GGWCC 5 cut(s) 107, 247, 509, 751, 1501
BamHI GGATCC 1 cut(s) 1690
BanI GGYRCC 3 cut(s) 145, 521, 1265
BanII GRGCYC 1 cut(s) 1064
BbrPI CACGTG 2 cut(s) 854, 1770
BbsI GAAGAC 1 cut(s) 1652
Bbv12I GWGCWC 1 cut(s) 1064
BbvI GCAGC 2 cut(s) 887, 1057
BccI CCATC 6 cut(s) 50, 182, 214, 392, 1256, 1336
BceAI ACGGC 2 cut(s) 133, 159
BciT130I CCWGG 7 cut(s) 519, 588, 819, 1074, 1569, 1620, 1756
BciVI GTATCC 1 cut(s) 224
BclI TGATCA 2 cut(s) 184, 1597
BcnI CCSGG 4 cut(s) 104, 105, 1554, 1734
BcoDI GTCTC 1 cut(s) 687
BcuI ACTAGT 1 cut(s) 310
BfaI CTAG 6 cut(s) 311, 506, 690, 833, 1590, 1856
BfmI CTRYAG 3 cut(s) 324, 350, 718
BfoI RGCGCY 2 cut(s) 33, 149
BfuI GTATCC 1 cut(s) 224
BisI GCNGC 5 cut(s) 96, 425, 876, 1046, 1739
BlsI GCNGC 5 cut(s) 97, 426, 877, 1047, 1740
Bme18I GGWCC 5 cut(s) 107, 247, 509, 751, 1501
BmeT110I CYCGRG 1 cut(s) 103
BmgBI CACGTC 1 cut(s) 882
BmsI GCATC 3 cut(s) 313, 710, 1171
BpiI GAAGAC 1 cut(s) 1652
BplI GAGNNNNNCTC 6 cut(s) 53, 85, 1051, 1083, 1296, 1328
BpmI CTGGAG 4 cut(s) 1378, 1546, 1560, 1836
BpuEI CTTGAG 1 cut(s) 650
BpuMI CCSGG 4 cut(s) 104, 105, 1554, 1734
BsaAI YACGTR 2 cut(s) 854, 1770
BsaBI GATNNNNATC 2 cut(s) 21, 501
BsaHI GRCGYC 4 cut(s) 93, 146, 171, 686
BsaJI CCNNGG 9 cut(s) 33, 103, 240, 250, 370, 1618, 1733, 1755, 1801
BsaWI WCCGGW 2 cut(s) 227, 1301
BsaXI ACNNNNNCTCC 2 cut(s) 894, 924
Bsc4I CCNNNNNNNGG 8 cut(s) 241, 300, 440, 518, 1073, 1461, 1510, 1559
Bse1I ACTGG 5 cut(s) 512, 1176, 1370, 1543, 1819
Bse3DI GCAATG 1 cut(s) 696
Bse8I GATNNNNATC 2 cut(s) 21, 501
BseAI TCCGGA 1 cut(s) 1301
BseBI CCWGG 7 cut(s) 519, 588, 819, 1074, 1569, 1620, 1756
BseDI CCNNGG 9 cut(s) 33, 103, 240, 250, 370, 1618, 1733, 1755, 1801
BseGI GGATG 5 cut(s) 187, 304, 451, 1186, 1833
BseJI GATNNNNATC 2 cut(s) 21, 501
BseLI CCNNNNNNNGG 8 cut(s) 241, 300, 440, 518, 1073, 1461, 1510, 1559
BseMI GCAATG 1 cut(s) 696
BseMII CTCAG 3 cut(s) 17, 1327, 1496
BseNI ACTGG 5 cut(s) 512, 1176, 1370, 1543, 1819
BseXI GCAGC 2 cut(s) 887, 1057
BsgI GTGCAG 3 cut(s) 963, 1237, 1314
Bsh1285I CGRYCG 1 cut(s) 256
BshFI GGCC 6 cut(s) 102, 286, 1086, 1449, 1465, 1741
BshNI GGYRCC 3 cut(s) 145, 521, 1265
BsiEI CGRYCG 1 cut(s) 256
BsiHKAI GWGCWC 1 cut(s) 1064
BsiHKCI CYCGRG 1 cut(s) 103
BsiSI CCGG 5 cut(s) 104, 228, 1302, 1554, 1733
BslFI GGGAC 4 cut(s) 23, 120, 1773, 1798
BslI CCNNNNNNNGG 8 cut(s) 241, 300, 440, 518, 1073, 1461, 1510, 1559
BsmAI GTCTC 1 cut(s) 687
BsmFI GGGAC 4 cut(s) 23, 120, 1773, 1798
BsmI GAATGC 3 cut(s) 781, 1030, 1554
BsnI GGCC 6 cut(s) 102, 286, 1086, 1449, 1465, 1741
BsoBI CYCGRG 1 cut(s) 103
Bsp1286I GDGCHC 1 cut(s) 1064
Bsp13I TCCGGA 1 cut(s) 1301
BspACI CCGC 6 cut(s) 96, 110, 153, 424, 576, 1738
BspANI GGCC 6 cut(s) 102, 286, 1086, 1449, 1465, 1741
BspCNI CTCAG 3 cut(s) 18, 1326, 1497
BspEI TCCGGA 1 cut(s) 1301
BspHI TCATGA 1 cut(s) 1843
BspMAI CTGCAG 1 cut(s) 354
BspPI GGATC 5 cut(s) 30, 409, 1026, 1685, 1698
BspQI GCTCTTC 1 cut(s) 76
BspT107I GGYRCC 3 cut(s) 145, 521, 1265
BsrDI GCAATG 1 cut(s) 696
BsrI ACTGG 5 cut(s) 512, 1176, 1370, 1543, 1819
BssECI CCNNGG 9 cut(s) 33, 103, 240, 250, 370, 1618, 1733, 1755, 1801
BssNI GRCGYC 4 cut(s) 93, 146, 171, 686
BssT1I CCWWGG 2 cut(s) 370, 1801
Bst2UI CCWGG 7 cut(s) 519, 588, 819, 1074, 1569, 1620, 1756
Bst4CI ACNGT 3 cut(s) 211, 898, 1247
Bst6I CTCTTC 3 cut(s) 76, 1233, 1815
BstACI GRCGYC 4 cut(s) 93, 146, 171, 686
BstAPI GCANNNNNTGC 1 cut(s) 1150
BstBAI YACGTR 2 cut(s) 854, 1770
BstC8I GCNNGC 3 cut(s) 100, 849, 1142
BstDEI CTNAG 3 cut(s) 26, 1313, 1505
BstEII GGTNACC 2 cut(s) 223, 892
BstENI CCTNNNNNAGG 1 cut(s) 1508
BstF5I GGATG 5 cut(s) 187, 304, 451, 1186, 1833
BstH2I RGCGCY 2 cut(s) 33, 149
BstHHI GCGC 2 cut(s) 32, 148
BstMAI GTCTC 1 cut(s) 687
BstMCI CGRYCG 1 cut(s) 256
BstMWI GCNNNNNNNGC 2 cut(s) 1150, 1846
BstNI CCWGG 7 cut(s) 519, 588, 819, 1074, 1569, 1620, 1756
BstNSI RCATGY 1 cut(s) 1052
BstPI GGTNACC 2 cut(s) 223, 892
BstSFI CTRYAG 3 cut(s) 324, 350, 718
BstV1I GCAGC 2 cut(s) 887, 1057
BstV2I GAAGAC 1 cut(s) 1652
BstX2I RGATCY 4 cut(s) 22, 401, 1018, 1690
BstXI CCANNNNNNTGG 3 cut(s) 470, 1239, 1377
BstYI RGATCY 4 cut(s) 22, 401, 1018, 1690
BsuI GTATCC 1 cut(s) 224
BsuRI GGCC 6 cut(s) 102, 286, 1086, 1449, 1465, 1741
BtrI CACGTC 1 cut(s) 882
BtsCI GGATG 5 cut(s) 187, 304, 451, 1186, 1833
BtsIMutI CAGTG 3 cut(s) 519, 1321, 1536
Cac8I GCNNGC 3 cut(s) 100, 849, 1142
CaiI CAGNNNCTG 2 cut(s) 518, 1251
CciI TCATGA 1 cut(s) 1843
CfoI GCGC 2 cut(s) 32, 148
Cfr9I CCCGGG 1 cut(s) 103
CseI GACGC 3 cut(s) 101, 179, 694
Csp6I GTAC 3 cut(s) 522, 1169, 1730
CviQI GTAC 3 cut(s) 522, 1169, 1730
DdeI CTNAG 3 cut(s) 26, 1313, 1505
DinI GGCGCC 1 cut(s) 147
DrdI GACNNNNNNGTC 1 cut(s) 1304
DseDI GACNNNNNNGTC 1 cut(s) 1304
Eam1104I CTCTTC 3 cut(s) 76, 1233, 1815
EarI CTCTTC 3 cut(s) 76, 1233, 1815
Ecl136II GAGCTC 1 cut(s) 1062
Eco130I CCWWGG 2 cut(s) 370, 1801
Eco24I GRGCYC 1 cut(s) 1064
Eco47I GGWCC 5 cut(s) 107, 247, 509, 751, 1501
Eco53kI GAGCTC 1 cut(s) 1062
Eco72I CACGTG 2 cut(s) 854, 1770
Eco88I CYCGRG 1 cut(s) 103
Eco91I GGTNACC 2 cut(s) 223, 892
EcoICRI GAGCTC 1 cut(s) 1062
EcoNI CCTNNNNNAGG 1 cut(s) 1508
EcoO109I RGGNCCY 3 cut(s) 247, 751, 1447
EcoO65I GGTNACC 2 cut(s) 223, 892
EcoRI GAATTC 2 cut(s) 365, 474
EcoRII CCWGG 7 cut(s) 517, 586, 817, 1072, 1567, 1618, 1754
EcoT14I CCWWGG 2 cut(s) 370, 1801
EcoT22I ATGCAT 1 cut(s) 781
EcoT38I GRGCYC 1 cut(s) 1064
EgeI GGCGCC 1 cut(s) 147
EheI GGCGCC 1 cut(s) 147
ErhI CCWWGG 2 cut(s) 370, 1801
FaqI GGGAC 4 cut(s) 23, 120, 1773, 1798
FauI CCCGC 1 cut(s) 146
FbaI TGATCA 2 cut(s) 184, 1597
Fnu4HI GCNGC 5 cut(s) 96, 425, 876, 1046, 1739
FokI GGATG 5 cut(s) 174, 291, 458, 1193, 1840
FriOI GRGCYC 1 cut(s) 1064
Fsp4HI GCNGC 5 cut(s) 96, 425, 876, 1046, 1739
FspBI CTAG 6 cut(s) 311, 506, 690, 833, 1590, 1856
GlaI GCGC 2 cut(s) 31, 147
GluI GCNGC 5 cut(s) 96, 425, 876, 1046, 1739
GsuI CTGGAG 4 cut(s) 1378, 1546, 1560, 1836
HaeII RGCGCY 2 cut(s) 33, 149
HaeIII GGCC 6 cut(s) 102, 286, 1086, 1449, 1465, 1741
HapII CCGG 5 cut(s) 104, 228, 1302, 1554, 1733
HgaI GACGC 3 cut(s) 101, 179, 694
HhaI GCGC 2 cut(s) 32, 148
Hin1I GRCGYC 4 cut(s) 93, 146, 171, 686
Hin6I GCGC 2 cut(s) 30, 146
HinP1I GCGC 2 cut(s) 30, 146
HincII GTYRAC 1 cut(s) 205
HindII GTYRAC 1 cut(s) 205
HinfI GANTC 8 cut(s) 17, 317, 536, 726, 1298, 1305, 1629, 1749
HpaII CCGG 5 cut(s) 104, 228, 1302, 1554, 1733
HphI GGTGA 3 cut(s) 217, 886, 986
Hpy166II GTNNAC 2 cut(s) 205, 857
Hpy188I TCNGA 6 cut(s) 22, 27, 334, 553, 1023, 1874
Hpy8I GTNNAC 2 cut(s) 205, 857
Hpy99I CGWCG 7 cut(s) 86, 89, 92, 95, 128, 173, 883
HpyAV CCTTC 6 cut(s) 127, 294, 971, 1018, 1319, 1398
HpyCH4III ACNGT 3 cut(s) 211, 898, 1247
HpyCH4IV ACGT 5 cut(s) 201, 853, 881, 1196, 1769
HpyF10VI GCNNNNNNNGC 2 cut(s) 1150, 1846
HpyF3I CTNAG 3 cut(s) 26, 1313, 1505
HpySE526I ACGT 5 cut(s) 201, 853, 881, 1196, 1769
Hsp92I GRCGYC 4 cut(s) 93, 146, 171, 686
HspAI GCGC 2 cut(s) 30, 146
KasI GGCGCC 1 cut(s) 145
Kpn2I TCCGGA 1 cut(s) 1301
KpnI GGTACC 1 cut(s) 525
Ksp22I TGATCA 2 cut(s) 184, 1597
LguI GCTCTTC 1 cut(s) 76
LmnI GCTCC 5 cut(s) 141, 604, 1067, 1225, 1585
Lsp1109I GCAGC 2 cut(s) 887, 1057
LweI GCATC 3 cut(s) 313, 710, 1171
MaeI CTAG 6 cut(s) 311, 506, 690, 833, 1590, 1856
MaeII ACGT 5 cut(s) 201, 853, 881, 1196, 1769
MaeIII GTNAC 7 cut(s) 163, 223, 892, 926, 1110, 1400, 1534
MfeI CAATTG 2 cut(s) 641, 1794
MflI RGATCY 4 cut(s) 22, 401, 1018, 1690
MhlI GDGCHC 1 cut(s) 1064
MluCI AATT 5 cut(s) 130, 365, 474, 641, 1794
Mly113I GGCGCC 1 cut(s) 146
MlyI GAGTC 4 cut(s) 545, 720, 1292, 1314
MmeI TCCRAC 4 cut(s) 880, 1217, 1718, 1759
Mph1103I ATGCAT 1 cut(s) 781
MroI TCCGGA 1 cut(s) 1301
MseI TTAA 4 cut(s) 383, 984, 1724, 1832
MspA1I CMGCKG 1 cut(s) 98
MspI CCGG 5 cut(s) 104, 228, 1302, 1554, 1733
MunI CAATTG 2 cut(s) 641, 1794
Mva1269I GAATGC 3 cut(s) 781, 1030, 1554
MvaI CCWGG 7 cut(s) 519, 588, 819, 1074, 1569, 1620, 1756
MwoI GCNNNNNNNGC 2 cut(s) 1150, 1846
NarI GGCGCC 1 cut(s) 146
NciI CCSGG 4 cut(s) 104, 105, 1554, 1734
NmeAIII GCCGAG 2 cut(s) 58, 265
NmuCI GTSAC 5 cut(s) 223, 892, 1110, 1400, 1534
NsiI ATGCAT 1 cut(s) 781
NspI RCATGY 1 cut(s) 1052
PagI TCATGA 1 cut(s) 1843
PciSI GCTCTTC 1 cut(s) 76
PcsI WCGNNNNNNNCGW 3 cut(s) 87, 207, 262
PctI GAATGC 3 cut(s) 781, 1030, 1554
PfeI GAWTC 4 cut(s) 17, 317, 1629, 1749
PflMI CCANNNNNTGG 1 cut(s) 518
PfoI TCCNGGA 2 cut(s) 586, 1567
PkrI GCNGC 5 cut(s) 97, 426, 877, 1047, 1740
PleI GAGTC 4 cut(s) 544, 720, 1292, 1313
PluTI GGCGCC 1 cut(s) 149
PmaCI CACGTG 2 cut(s) 854, 1770
PmlI CACGTG 2 cut(s) 854, 1770
PpsI GAGTC 4 cut(s) 544, 720, 1292, 1313
Ppu21I YACGTR 2 cut(s) 854, 1770
PpuMI RGGWCCY 2 cut(s) 247, 751
Psp124BI GAGCTC 1 cut(s) 1064
Psp5II RGGWCCY 2 cut(s) 247, 751
Psp6I CCWGG 7 cut(s) 517, 586, 817, 1072, 1567, 1618, 1754
PspCI CACGTG 2 cut(s) 854, 1770
PspEI GGTNACC 2 cut(s) 223, 892
PspGI CCWGG 7 cut(s) 517, 586, 817, 1072, 1567, 1618, 1754
PspPPI RGGWCCY 2 cut(s) 247, 751
PstI CTGCAG 1 cut(s) 354
PstNI CAGNNNCTG 2 cut(s) 518, 1251
PsuI RGATCY 4 cut(s) 22, 401, 1018, 1690
RsaI GTAC 3 cut(s) 523, 1170, 1731
RsaNI GTAC 3 cut(s) 522, 1169, 1730
SacI GAGCTC 1 cut(s) 1064
SapI GCTCTTC 1 cut(s) 76
SaqAI TTAA 4 cut(s) 383, 984, 1724, 1832
SatI GCNGC 5 cut(s) 96, 425, 876, 1046, 1739
SchI GAGTC 4 cut(s) 545, 720, 1292, 1314
SduI GDGCHC 1 cut(s) 1064
SfaNI GCATC 3 cut(s) 313, 710, 1171
SfcI CTRYAG 3 cut(s) 324, 350, 718
SfoI GGCGCC 1 cut(s) 147
SinI GGWCC 5 cut(s) 107, 247, 509, 751, 1501
SmaI CCCGGG 1 cut(s) 105
SmlI CTYRAG 1 cut(s) 665
SmoI CTYRAG 1 cut(s) 665
SpeI ACTAGT 1 cut(s) 310
Sse9I AATT 5 cut(s) 130, 365, 474, 641, 1794
SsiI CCGC 6 cut(s) 96, 110, 153, 424, 576, 1738
SspDI GGCGCC 1 cut(s) 145
SspI AATATT 2 cut(s) 613, 1722
SspMI CTAG 6 cut(s) 311, 506, 690, 833, 1590, 1856
SstI GAGCTC 1 cut(s) 1064
StyI CCWWGG 2 cut(s) 370, 1801
TaaI ACNGT 3 cut(s) 211, 898, 1247
TaiI ACGT 5 cut(s) 204, 856, 884, 1199, 1772
TaqI TCGA 5 cut(s) 81, 126, 177, 1340, 1481
TaqII GACCGA 1 cut(s) 242
TasI AATT 5 cut(s) 130, 365, 474, 641, 1794
TatI WGTACW 1 cut(s) 1168
TauI GCSGC 3 cut(s) 98, 427, 1741
TfiI GAWTC 4 cut(s) 17, 317, 1629, 1749
Tru1I TTAA 4 cut(s) 383, 984, 1724, 1832
Tru9I TTAA 4 cut(s) 383, 984, 1724, 1832
TscAI CASTG 3 cut(s) 519, 1321, 1543
TseFI GTSAC 5 cut(s) 223, 892, 1110, 1400, 1534
TseI GCWGC 2 cut(s) 875, 1045
Tsp45I GTSAC 5 cut(s) 223, 892, 1110, 1400, 1534
TspDTI ATGAA 4 cut(s) 428, 551, 1013, 1832
TspGWI ACGGA 1 cut(s) 503
TspMI CCCGGG 1 cut(s) 103
TspRI CASTG 3 cut(s) 519, 1321, 1543
Van91I CCANNNNNTGG 1 cut(s) 518
VpaK11BI GGWCC 5 cut(s) 107, 247, 509, 751, 1501
XagI CCTNNNNNAGG 1 cut(s) 1508
XapI RAATTY 3 cut(s) 130, 365, 474
XceI RCATGY 1 cut(s) 1052
XcmI CCANNNNNNNNNTGG 1 cut(s) 1752
XmaI CCCGGG 1 cut(s) 103
XspI CTAG 6 cut(s) 311, 506, 690, 833, 1590, 1856
Zsp2I ATGCAT 1 cut(s) 781
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.