Rw4G008600

Adagio protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0004937
Physical Location & Seq
Forward (+)
18912206 .. 18918502
6297 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G008600.1

Sequence Viewer

Length: 1881 bp
ATGGAGTGGGACAGCGATTCGGATCTGAGCGCCGAGGAGGAGGAGGAGGACGCGGAGGTCAGCTCTTCCATGTTCGACGACGACGACGCCGCCGGCCCCGGTCCGCTTCCCTTCCCCGTCGAGAATTTGCTTCAAACGGCGCCGTGCGGGATTGTTGTTACCGACGCCATCGACCCTGATCATCCTATCATCTACGTCAACACCGTCTTTGAGATGGTCACCGGATACCGTGCCGAGGAGGTCCTCGGTCGCAACTGCCGATTTTTGCAATATAGAGGGCCATTTGCCAAAAGAAGGCATCCACTAGTGGATTCTGCAGTAGTTTCAGAAATCAAACGATGTCTGGAGGAGGGCATTGAATTCCAAGGAGAGTTGTTAAACTTTAGGAAAGATGGATCTCCAATGATGAATAGGTTGCGGCTGACACCTATATATGGGGATGATGATGTGATAAGCCATGTCATTGGAATTCAGTTCTTCACGGAGTCTGCAAAATCTTCTGATCGGTTTCATGCTTGTCTTTCCGCTTTTCGTCCTGGATTGCCTCTGGGGGAGCGTAATATCTGTCGTGGAGTTTGTGGGATATTGCAATTGAGTGATGAGGTTATTGCTCTCAAGATATTATCTAACTTGACGCCTAGAGACATTGCATCTGTTGGGTCAGTCTGTAGGCGACTCTATGAGCTTACGAAGAATGAGGACCTTTGGAGAGTGGTCTGCCAGAATGCATGGGGTAGTGAAACAACCCGTGTTTTACAGGCTGTGCCAGGTGCAAAGAGGCTAGGTTGGGGTAGGCTGGCACGTGAACTGACCACTCTTGAAGCAGCGACGTGGAGAAAGGTCACCGTTGGAGGTGCTGTGGAACCCTCACGCTGTAACTTTAGTGCTTGTGCAGTTGGTAATCGTGTAGTTCTTTTCGGTGGTGAAGGGGTTAATATGCAACCAATGAATGACACCTTCGTATTGGATCTGAATGCCAATAACCCAGAGTGGCAGCATGTCCAAGTGAGCTCCCCTCCTCCTGGTCGTTGGGGCCATACACTTTCTTGTGTGAATGGGTCACATTTGGTGGTATTTGGAGGCTGTGGCAGGCAGGGTTTGCTAAATGATGTTTTTGTACTGGATTTGGATGCAAAACCTCCAACTTGGCGTGAAATATCTGGGTTGGCTCCTCCTCTTCCAAGATCATGGCACAGTTCCTGCACTCTTGATGGCACCAAGTTGATAGTTTCAGGTGGTTGTGCAGACTCTGGAGTCCTTCTCAGTGATACCTTTTTGCTTGATCTCTCGATGGAAAGACCTGTCTGGAGAGAGATACCAGTAGCATGGAAGCCCCCTTCCAGATTAGGTCACACCCTGTCTGTATATGGTGGTAGGAAGATTTTGATGTTTGGGGGCCTTGCCAAGAGTGGGCCACTTCGGTTTCGTTCGAGTGATGTTTTTACAATGGACCTGAGTGAGGACGAACCATGCTGGAGGTGTGTCACTGGAGGTGGAGTTCCCGGTTCTGGAAATCCAGGAGGAATGGCTCCTCCTCCTAGACTTGATCATGTCGCTGTGAGCCTCCCAGGTGGGAGAATCTTGATCTTTGGTGGGTCTGTTGCTGGTCTTCACTCTGCCTCACAACTTTATCTTCTGGACCCAACTGATGAGAAACCTACATGGAGAATATTAAATGTACCGGGGCGGCCCCCAAGATTCGCCTGGGGACACAGCACGTGTGTTGTTGGAGGGACAAGGGCAATTGTCCTTGGTGGTCAAACTGGAGAAGAGTGGATGTTAAGATTTGTATTGTCATCCCACTTGTATTTTCCTTGCAATTATGTCATTGAGAATTCCTTTTTTTTTTTTTTTGGAACAATGATTCAGACTCTAGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
F-box-like Kelch_2 Kelch_4 PAS_9

Protein Analysis

626

Amino Acids

68.55

Weight (kDa)

5.49

Isoelectric Point (pI)

42.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS PF00989 41 - 157 6.5e-09 PAS fold
PAS_9 PF13426 48 - 158 1.7e-16 PAS domain
PAS_3 PF08447 63 - 157 3.6e-07 PAS fold
F-box-like PF12937 203 - 241 3.4e-10 F-box-like
Kelch_KLHDC2_KLHL20_DRC7 PF24681 272 - 466 2.7e-37 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42 PF13415 273 - 431 1.1e-26 FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1 PF24981 273 - 414 1.4e-10 Attractin/LZTR1 beta-propeller
Beta-prop_TYW4 PF13418 290 - 485 1e-08 tRNA wybutosine-synthesizing protein 4, beta-propeller
Kelch_HCF PF13854 329 - 586 8.9e-14 Host cell factor, Kelch-repeats domain
Beta-prop_ATRN-LZTR1 PF24981 423 - 588 6.6e-08 Attractin/LZTR1 beta-propeller
Beta-prop_FBX42 PF13415 436 - 594 8.6e-14 FBX42, beta-propeller domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 450 - 593 4.9e-15 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Kelch_2 PF07646 515 - 562 2.8e-06 Kelch motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 56, 1253
AccB1I GGYRCC 2 cut(s) 139, 1214
AccII CGCG 1 cut(s) 53
AciI CCGC 7 cut(s) 53, 90, 104, 147, 418, 525, 1687
AclWI GGATC 3 cut(s) 30, 403, 975
AcsI RAATTY 4 cut(s) 124, 359, 468, 1834
AcvI CACGTG 2 cut(s) 803, 1719
AcyI GRCGYC 4 cut(s) 87, 140, 165, 635
AfaI GTAC 2 cut(s) 1119, 1680
AfiI CCNNNNNNNGG 7 cut(s) 235, 294, 434, 1022, 1410, 1459, 1508
AflIII ACRYGT 1 cut(s) 1718
AgsI TTSAA 3 cut(s) 134, 359, 821
AhlI ACTAGT 1 cut(s) 304
AjiI CACGTC 1 cut(s) 831
AjnI CCWGG 6 cut(s) 535, 766, 1021, 1516, 1567, 1703
AloI GAACNNNNNNTCC 2 cut(s) 1482, 1514
AluBI AGCT 3 cut(s) 63, 685, 1011
AluI AGCT 3 cut(s) 63, 685, 1011
Alw21I GWGCWC 1 cut(s) 1013
Alw26I GTCTC 1 cut(s) 636
AlwI GGATC 3 cut(s) 30, 403, 975
AlwNI CAGNNNCTG 2 cut(s) 1200, 1250
AoxI GGCC 6 cut(s) 94, 278, 1033, 1396, 1412, 1688
ApeKI GCWGC 2 cut(s) 824, 994
ApoI RAATTY 4 cut(s) 124, 359, 468, 1834
AspLEI GCGC 2 cut(s) 32, 142
AsuC2I CCSGG 3 cut(s) 99, 1503, 1683
AsuHPI GGTGA 3 cut(s) 211, 835, 935
AvaII GGWCC 5 cut(s) 101, 241, 700, 1450, 1639
BanI GGYRCC 2 cut(s) 139, 1214
BanII GRGCYC 1 cut(s) 1013
BbrPI CACGTG 2 cut(s) 803, 1719
BbsI GAAGAC 1 cut(s) 1601
Bbv12I GWGCWC 1 cut(s) 1013
BbvI GCAGC 2 cut(s) 836, 1006
BccI CCATC 5 cut(s) 176, 208, 386, 1205, 1285
BceAI ACGGC 2 cut(s) 127, 153
BciT130I CCWGG 6 cut(s) 537, 768, 1023, 1518, 1569, 1705
BciVI GTATCC 1 cut(s) 218
BclI TGATCA 2 cut(s) 178, 1546
BcnI CCSGG 3 cut(s) 99, 1503, 1683
BcoDI GTCTC 1 cut(s) 636
BcuI ACTAGT 1 cut(s) 304
BfaI CTAG 5 cut(s) 305, 639, 782, 1539, 1874
BfmI CTRYAG 2 cut(s) 315, 667
BfoI RGCGCY 2 cut(s) 33, 143
BfuI GTATCC 1 cut(s) 218
BisI GCNGC 5 cut(s) 90, 419, 825, 995, 1688
BlsI GCNGC 5 cut(s) 91, 420, 826, 996, 1689
Bme1390I CCNGG 9 cut(s) 99, 537, 768, 1023, 1503, 1518, 1569, 1683, 1705
Bme18I GGWCC 5 cut(s) 101, 241, 700, 1450, 1639
BmgBI CACGTC 1 cut(s) 831
BmrFI CCNGG 9 cut(s) 99, 537, 768, 1023, 1503, 1518, 1569, 1683, 1705
BmsI GCATC 3 cut(s) 307, 659, 1120
BpiI GAAGAC 1 cut(s) 1601
BplI GAGNNNNNCTC 6 cut(s) 47, 79, 1000, 1032, 1245, 1277
BpmI CTGGAG 6 cut(s) 365, 1272, 1327, 1495, 1509, 1785
BpuEI CTTGAG 1 cut(s) 599
BpuMI CCSGG 3 cut(s) 99, 1503, 1683
BsaAI YACGTR 2 cut(s) 803, 1719
BsaBI GATNNNNATC 1 cut(s) 21
BsaHI GRCGYC 4 cut(s) 87, 140, 165, 635
BsaJI CCNNGG 9 cut(s) 33, 97, 234, 244, 364, 1567, 1682, 1704, 1750
BsaWI WCCGGW 1 cut(s) 221
BsaXI ACNNNNNCTCC 4 cut(s) 843, 873, 1482, 1512
Bsc4I CCNNNNNNNGG 7 cut(s) 235, 294, 434, 1022, 1410, 1459, 1508
Bse118I RCCGGY 1 cut(s) 92
Bse1I ACTGG 4 cut(s) 1125, 1319, 1492, 1768
Bse3DI GCAATG 1 cut(s) 645
Bse8I GATNNNNATC 1 cut(s) 21
BseBI CCWGG 6 cut(s) 537, 768, 1023, 1518, 1569, 1705
BseDI CCNNGG 9 cut(s) 33, 97, 234, 244, 364, 1567, 1682, 1704, 1750
BseGI GGATG 6 cut(s) 181, 298, 445, 1135, 1782, 1796
BseJI GATNNNNATC 1 cut(s) 21
BseLI CCNNNNNNNGG 7 cut(s) 235, 294, 434, 1022, 1410, 1459, 1508
BseMI GCAATG 1 cut(s) 645
BseMII CTCAG 3 cut(s) 17, 1276, 1445
BseNI ACTGG 4 cut(s) 1125, 1319, 1492, 1768
BseXI GCAGC 2 cut(s) 836, 1006
BsgI GTGCAG 3 cut(s) 912, 1186, 1263
Bsh1236I CGCG 1 cut(s) 53
Bsh1285I CGRYCG 1 cut(s) 250
BshFI GGCC 6 cut(s) 96, 280, 1035, 1398, 1414, 1690
BshNI GGYRCC 2 cut(s) 139, 1214
BsiEI CGRYCG 1 cut(s) 250
BsiHKAI GWGCWC 1 cut(s) 1013
BsiSI CCGG 5 cut(s) 93, 99, 222, 1503, 1682
BslFI GGGAC 3 cut(s) 23, 1722, 1747
BslI CCNNNNNNNGG 7 cut(s) 235, 294, 434, 1022, 1410, 1459, 1508
BsmAI GTCTC 1 cut(s) 636
BsmFI GGGAC 3 cut(s) 23, 1722, 1747
BsmI GAATGC 2 cut(s) 730, 979
BsnI GGCC 6 cut(s) 96, 280, 1035, 1398, 1414, 1690
Bsp1286I GDGCHC 1 cut(s) 1013
Bsp143I GATC 9 cut(s) 22, 178, 395, 502, 967, 1184, 1282, 1546, 1584
BspACI CCGC 7 cut(s) 53, 90, 104, 147, 418, 525, 1687
BspANI GGCC 6 cut(s) 96, 280, 1035, 1398, 1414, 1690
BspCNI CTCAG 3 cut(s) 18, 1275, 1446
BspFNI CGCG 1 cut(s) 53
BspMAI CTGCAG 1 cut(s) 319
BspPI GGATC 3 cut(s) 30, 403, 975
BspQI GCTCTTC 1 cut(s) 70
BspT107I GGYRCC 2 cut(s) 139, 1214
BsrDI GCAATG 1 cut(s) 645
BsrFI RCCGGY 1 cut(s) 92
BsrI ACTGG 4 cut(s) 1125, 1319, 1492, 1768
BssAI RCCGGY 1 cut(s) 92
BssECI CCNNGG 9 cut(s) 33, 97, 234, 244, 364, 1567, 1682, 1704, 1750
BssMI GATC 9 cut(s) 22, 178, 395, 502, 967, 1184, 1282, 1546, 1584
BssNI GRCGYC 4 cut(s) 87, 140, 165, 635
BssT1I CCWWGG 2 cut(s) 364, 1750
Bst2UI CCWGG 6 cut(s) 537, 768, 1023, 1518, 1569, 1705
Bst4CI ACNGT 4 cut(s) 205, 230, 847, 1196
Bst6I CTCTTC 3 cut(s) 70, 1182, 1764
BstACI GRCGYC 4 cut(s) 87, 140, 165, 635
BstAPI GCANNNNNTGC 1 cut(s) 1099
BstBAI YACGTR 2 cut(s) 803, 1719
BstC8I GCNNGC 3 cut(s) 94, 798, 1091
BstDEI CTNAG 3 cut(s) 26, 1262, 1454
BstEII GGTNACC 2 cut(s) 217, 841
BstENI CCTNNNNNAGG 1 cut(s) 1457
BstF5I GGATG 6 cut(s) 181, 298, 445, 1135, 1782, 1796
BstFNI CGCG 1 cut(s) 53
BstH2I RGCGCY 2 cut(s) 33, 143
BstHHI GCGC 2 cut(s) 32, 142
BstKTI GATC 9 cut(s) 25, 181, 398, 505, 970, 1187, 1285, 1549, 1587
BstMAI GTCTC 1 cut(s) 636
BstMBI GATC 9 cut(s) 22, 178, 395, 502, 967, 1184, 1282, 1546, 1584
BstMCI CGRYCG 1 cut(s) 250
BstMWI GCNNNNNNNGC 1 cut(s) 1099
BstNI CCWGG 6 cut(s) 537, 768, 1023, 1518, 1569, 1705
BstNSI RCATGY 1 cut(s) 1001
BstPI GGTNACC 2 cut(s) 217, 841
BstSCI CCNGG 9 cut(s) 97, 535, 766, 1021, 1501, 1516, 1567, 1681, 1703
BstSFI CTRYAG 2 cut(s) 315, 667
BstUI CGCG 1 cut(s) 53
BstV1I GCAGC 2 cut(s) 836, 1006
BstV2I GAAGAC 1 cut(s) 1601
BstX2I RGATCY 3 cut(s) 22, 395, 967
BstXI CCANNNNNNTGG 3 cut(s) 464, 1188, 1326
BstYI RGATCY 3 cut(s) 22, 395, 967
BsuI GTATCC 1 cut(s) 218
BsuRI GGCC 6 cut(s) 96, 280, 1035, 1398, 1414, 1690
BtrI CACGTC 1 cut(s) 831
BtsCI GGATG 6 cut(s) 181, 298, 445, 1135, 1782, 1796
BtsIMutI CAGTG 2 cut(s) 1270, 1485
Cac8I GCNNGC 3 cut(s) 94, 798, 1091
CaiI CAGNNNCTG 2 cut(s) 1200, 1250
CfoI GCGC 2 cut(s) 32, 142
Cfr10I RCCGGY 1 cut(s) 92
CpoI CGGWCCG 1 cut(s) 101
CseI GACGC 4 cut(s) 59, 95, 173, 643
Csp6I GTAC 2 cut(s) 1118, 1679
CspI CGGWCCG 1 cut(s) 101
CviQI GTAC 2 cut(s) 1118, 1679
DdeI CTNAG 3 cut(s) 26, 1262, 1454
DinI GGCGCC 1 cut(s) 141
DpnI GATC 9 cut(s) 24, 180, 397, 504, 969, 1186, 1284, 1548, 1586
DpnII GATC 9 cut(s) 22, 178, 395, 502, 967, 1184, 1282, 1546, 1584
DrdI GACNNNNNNGTC 2 cut(s) 56, 1253
DseDI GACNNNNNNGTC 2 cut(s) 56, 1253
Eam1104I CTCTTC 3 cut(s) 70, 1182, 1764
EarI CTCTTC 3 cut(s) 70, 1182, 1764
Ecl136II GAGCTC 1 cut(s) 1011
Eco130I CCWWGG 2 cut(s) 364, 1750
Eco24I GRGCYC 1 cut(s) 1013
Eco47I GGWCC 5 cut(s) 101, 241, 700, 1450, 1639
Eco53kI GAGCTC 1 cut(s) 1011
Eco72I CACGTG 2 cut(s) 803, 1719
Eco91I GGTNACC 2 cut(s) 217, 841
EcoICRI GAGCTC 1 cut(s) 1011
EcoNI CCTNNNNNAGG 1 cut(s) 1457
EcoO109I RGGNCCY 3 cut(s) 241, 700, 1396
EcoO65I GGTNACC 2 cut(s) 217, 841
EcoRI GAATTC 3 cut(s) 359, 468, 1834
EcoRII CCWGG 6 cut(s) 535, 766, 1021, 1516, 1567, 1703
EcoT14I CCWWGG 2 cut(s) 364, 1750
EcoT22I ATGCAT 1 cut(s) 730
EcoT38I GRGCYC 1 cut(s) 1013
EgeI GGCGCC 1 cut(s) 141
EheI GGCGCC 1 cut(s) 141
ErhI CCWWGG 2 cut(s) 364, 1750
FaqI GGGAC 3 cut(s) 23, 1722, 1747
FauI CCCGC 1 cut(s) 140
FbaI TGATCA 2 cut(s) 178, 1546
Fnu4HI GCNGC 5 cut(s) 90, 419, 825, 995, 1688
FokI GGATG 6 cut(s) 168, 285, 452, 1142, 1783, 1789
FriOI GRGCYC 1 cut(s) 1013
Fsp4HI GCNGC 5 cut(s) 90, 419, 825, 995, 1688
FspBI CTAG 5 cut(s) 305, 639, 782, 1539, 1874
GlaI GCGC 2 cut(s) 31, 141
GluI GCNGC 5 cut(s) 90, 419, 825, 995, 1688
GsuI CTGGAG 6 cut(s) 365, 1272, 1327, 1495, 1509, 1785
HaeII RGCGCY 2 cut(s) 33, 143
HaeIII GGCC 6 cut(s) 96, 280, 1035, 1398, 1414, 1690
HapII CCGG 5 cut(s) 93, 99, 222, 1503, 1682
HgaI GACGC 4 cut(s) 59, 95, 173, 643
HhaI GCGC 2 cut(s) 32, 142
Hin1I GRCGYC 4 cut(s) 87, 140, 165, 635
Hin6I GCGC 2 cut(s) 30, 140
HinP1I GCGC 2 cut(s) 30, 140
HincII GTYRAC 1 cut(s) 199
HindII GTYRAC 1 cut(s) 199
HpaII CCGG 5 cut(s) 93, 99, 222, 1503, 1682
HphI GGTGA 3 cut(s) 211, 835, 935
Hpy166II GTNNAC 2 cut(s) 199, 806
Hpy188I TCNGA 6 cut(s) 22, 27, 328, 502, 972, 1869
Hpy8I GTNNAC 2 cut(s) 199, 806
Hpy99I CGWCG 7 cut(s) 80, 83, 86, 89, 122, 167, 832
HpyAV CCTTC 6 cut(s) 121, 288, 920, 967, 1268, 1347
HpyCH4III ACNGT 4 cut(s) 205, 230, 847, 1196
HpyCH4IV ACGT 4 cut(s) 195, 802, 830, 1718
HpyF10VI GCNNNNNNNGC 1 cut(s) 1099
HpyF3I CTNAG 3 cut(s) 26, 1262, 1454
HpySE526I ACGT 4 cut(s) 195, 802, 830, 1718
Hsp92I GRCGYC 4 cut(s) 87, 140, 165, 635
HspAI GCGC 2 cut(s) 30, 140
KasI GGCGCC 1 cut(s) 139
KroI GCCGGC 1 cut(s) 92
KroNI GCCGGC 1 cut(s) 94
Ksp22I TGATCA 2 cut(s) 178, 1546
Kzo9I GATC 9 cut(s) 22, 178, 395, 502, 967, 1184, 1282, 1546, 1584
LguI GCTCTTC 1 cut(s) 70
LmnI GCTCC 4 cut(s) 553, 1016, 1174, 1534
Lsp1109I GCAGC 2 cut(s) 836, 1006
LweI GCATC 3 cut(s) 307, 659, 1120
MaeI CTAG 5 cut(s) 305, 639, 782, 1539, 1874
MaeII ACGT 4 cut(s) 195, 802, 830, 1718
MaeIII GTNAC 7 cut(s) 157, 217, 841, 875, 1059, 1349, 1483
MalI GATC 9 cut(s) 24, 180, 397, 504, 969, 1186, 1284, 1548, 1586
MboI GATC 9 cut(s) 22, 178, 395, 502, 967, 1184, 1282, 1546, 1584
MboII GAAGA 9 cut(s) 57, 469, 489, 703, 1169, 1390, 1601, 1625, 1781
MfeI CAATTG 2 cut(s) 590, 1743
MflI RGATCY 3 cut(s) 22, 395, 967
MhlI GDGCHC 1 cut(s) 1013
MluCI AATT 7 cut(s) 124, 359, 468, 590, 1743, 1819, 1834
Mly113I GGCGCC 1 cut(s) 140
MlyI GAGTC 5 cut(s) 494, 669, 1241, 1263, 1864
MmeI TCCRAC 3 cut(s) 829, 1166, 1708
Mph1103I ATGCAT 1 cut(s) 730
MroNI GCCGGC 1 cut(s) 92
MseI TTAA 5 cut(s) 377, 933, 1673, 1781, 1879
MspI CCGG 5 cut(s) 93, 99, 222, 1503, 1682
MspR9I CCNGG 9 cut(s) 99, 537, 768, 1023, 1503, 1518, 1569, 1683, 1705
MunI CAATTG 2 cut(s) 590, 1743
Mva1269I GAATGC 2 cut(s) 730, 979
MvaI CCWGG 6 cut(s) 537, 768, 1023, 1518, 1569, 1705
MvnI CGCG 1 cut(s) 53
MwoI GCNNNNNNNGC 1 cut(s) 1099
NaeI GCCGGC 1 cut(s) 94
NarI GGCGCC 1 cut(s) 140
NciI CCSGG 3 cut(s) 99, 1503, 1683
NdeII GATC 9 cut(s) 22, 178, 395, 502, 967, 1184, 1282, 1546, 1584
NgoMIV GCCGGC 1 cut(s) 92
NmeAIII GCCGAG 2 cut(s) 58, 259
NmuCI GTSAC 5 cut(s) 217, 841, 1059, 1349, 1483
NsiI ATGCAT 1 cut(s) 730
NspI RCATGY 1 cut(s) 1001
PciSI GCTCTTC 1 cut(s) 70
PcsI WCGNNNNNNNCGW 3 cut(s) 81, 201, 256
PctI GAATGC 2 cut(s) 730, 979
PdiI GCCGGC 1 cut(s) 94
PfeI GAWTC 5 cut(s) 17, 311, 1578, 1698, 1864
PfoI TCCNGGA 2 cut(s) 535, 1516
PkrI GCNGC 5 cut(s) 91, 420, 826, 996, 1689
PleI GAGTC 5 cut(s) 493, 669, 1241, 1262, 1864
PluTI GGCGCC 1 cut(s) 143
PmaCI CACGTG 2 cut(s) 803, 1719
PmlI CACGTG 2 cut(s) 803, 1719
PpsI GAGTC 5 cut(s) 493, 669, 1241, 1262, 1864
Ppu21I YACGTR 2 cut(s) 803, 1719
PpuMI RGGWCCY 2 cut(s) 241, 700
Psp124BI GAGCTC 1 cut(s) 1013
Psp5II RGGWCCY 2 cut(s) 241, 700
Psp6I CCWGG 6 cut(s) 535, 766, 1021, 1516, 1567, 1703
PspCI CACGTG 2 cut(s) 803, 1719
PspEI GGTNACC 2 cut(s) 217, 841
PspGI CCWGG 6 cut(s) 535, 766, 1021, 1516, 1567, 1703
PspPPI RGGWCCY 2 cut(s) 241, 700
PstI CTGCAG 1 cut(s) 319
PstNI CAGNNNCTG 2 cut(s) 1200, 1250
PsuI RGATCY 3 cut(s) 22, 395, 967
RsaI GTAC 2 cut(s) 1119, 1680
RsaNI GTAC 2 cut(s) 1118, 1679
Rsr2I CGGWCCG 1 cut(s) 101
RsrII CGGWCCG 1 cut(s) 101
SacI GAGCTC 1 cut(s) 1013
SapI GCTCTTC 1 cut(s) 70
SaqAI TTAA 5 cut(s) 377, 933, 1673, 1781, 1879
SatI GCNGC 5 cut(s) 90, 419, 825, 995, 1688
Sau3AI GATC 9 cut(s) 22, 178, 395, 502, 967, 1184, 1282, 1546, 1584
SchI GAGTC 5 cut(s) 494, 669, 1241, 1263, 1864
ScrFI CCNGG 9 cut(s) 99, 537, 768, 1023, 1503, 1518, 1569, 1683, 1705
SduI GDGCHC 1 cut(s) 1013
SfaNI GCATC 3 cut(s) 307, 659, 1120
SfcI CTRYAG 2 cut(s) 315, 667
SfoI GGCGCC 1 cut(s) 141
SinI GGWCC 5 cut(s) 101, 241, 700, 1450, 1639
SmlI CTYRAG 1 cut(s) 614
SmoI CTYRAG 1 cut(s) 614
SpeI ACTAGT 1 cut(s) 304
Sse9I AATT 7 cut(s) 124, 359, 468, 590, 1743, 1819, 1834
SsiI CCGC 7 cut(s) 53, 90, 104, 147, 418, 525, 1687
SspDI GGCGCC 1 cut(s) 139
SspI AATATT 1 cut(s) 1671
SspMI CTAG 5 cut(s) 305, 639, 782, 1539, 1874
SstI GAGCTC 1 cut(s) 1013
StyD4I CCNGG 9 cut(s) 97, 535, 766, 1021, 1501, 1516, 1567, 1681, 1703
StyI CCWWGG 2 cut(s) 364, 1750
TaaI ACNGT 4 cut(s) 205, 230, 847, 1196
TaiI ACGT 4 cut(s) 198, 805, 833, 1721
TaqI TCGA 5 cut(s) 75, 120, 171, 1289, 1430
TaqII GACCGA 1 cut(s) 236
TasI AATT 7 cut(s) 124, 359, 468, 590, 1743, 1819, 1834
TatI WGTACW 1 cut(s) 1117
TauI GCSGC 3 cut(s) 92, 421, 1690
TfiI GAWTC 5 cut(s) 17, 311, 1578, 1698, 1864
Tru1I TTAA 5 cut(s) 377, 933, 1673, 1781, 1879
Tru9I TTAA 5 cut(s) 377, 933, 1673, 1781, 1879
TscAI CASTG 2 cut(s) 1270, 1492
TseFI GTSAC 5 cut(s) 217, 841, 1059, 1349, 1483
TseI GCWGC 2 cut(s) 824, 994
Tsp45I GTSAC 5 cut(s) 217, 841, 1059, 1349, 1483
TspDTI ATGAA 3 cut(s) 422, 500, 962
TspGWI ACGGA 1 cut(s) 497
TspRI CASTG 2 cut(s) 1270, 1492
VpaK11BI GGWCC 5 cut(s) 101, 241, 700, 1450, 1639
XagI CCTNNNNNAGG 1 cut(s) 1457
XapI RAATTY 4 cut(s) 124, 359, 468, 1834
XceI RCATGY 1 cut(s) 1001
XcmI CCANNNNNNNNNTGG 1 cut(s) 1701
XspI CTAG 5 cut(s) 305, 639, 782, 1539, 1874
Zsp2I ATGCAT 1 cut(s) 730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.