Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0005478

Physical Location & Seq

Genomic Coordinates Forward (+)

36033875 .. 36040026

Gene Structure 6152 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00413660.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGCGGACCAACAGAGGAAAGATCCCAAAGCAGAATTCGTGGCCTGGAGCAGTAGTGAGGAAATGGCTCAACATTCCGAGCGGAGGGGACGAGTTTCATTCCGATTACTCTGTAAAAAATGTAACTGAGAGTAGGAGGAAGAGTTGCTCGGACCAGGACCACTACGTCGTCGTACCGGACGATGTTACAGATGGTTGGTTGATGGAGGACGCTTACGGCCCAAGTTTTGCGCCGGAGGCACCAGCTGTGACCGACCATTCCAACCTCAGAATGTTCGTGGGGACATGGAACGTTGGAGGCAAATCACCACAAGAGGACTTGAACTTAAGGGAATGGCTTAGGTCCCCAACTCCTGCCGATATCTATGTTCTTGGATTTCAGGAAATTGTTCCTTTAAACGCCGGAAATGTATTGGGTGCGGAGGACAAGGGCCCAGCTGACAAGTGGCTTTTCCTTATTCGAGATGCTCTTAACAAGAATGACCCCGGACTTCCTAATAATTACAACAATGCCACCCATAATGATCAGCAAGGCAGCATGATGCCAAGGCTTAGCTTCTCGGACTTGCTTTCCTTAGAAGATGAACTCAGTGCTGCGGACTTTGAGAGACTGCTGAATTTCAATCCCGCGTCAACTTCTAGTGGAGAAAGCTCACCGAGTTCCCCACTGGGCCTGGGTATGCAGGAGAGTACTTCAATGCAACGACATCGTTATTGCTTAGCAGCGAGCAAGCAGATGGTGGGAATTTTCTTGTGTGTGTGGGTTCGCGCTGATCTTTGTAGACACATTAGCAACATGAAGGTCTCATGTGTTGGTCGAGGCATAATGGGATATCTTGGAAATAAGGGTTCAATATCAATAAGCATGACATTGCATAAAACAACCTTTTGCTTTGTCTGTGCTCACTTAACTTCTGGTGAGAAAGAAGGGGATGAGATGAAAAGGAATTCAGATGTCATCGAAATTTTAAAGAAAACAAAGTTTTCTAACTCATGTAGAACACGACCACTTCCTCCTGATAGCATATTGGACCATGACAAGATTATTTGGCTTGGGGATTTAAATTACCGGCTAGCAGCTGCTTGCGCTGACACGCATGAGCTTCTGCAGAAGCAGCATTGGCAAGCACTTTTAGAGAAAGATCAGCTAAGAATAGAGCAACAAGCTGGTAGAGTATTTAAAGGGTGGGAAGAAGGGAGGATATATTTTGCTCCAACTTACAAATACCTTGCAAATTCTAATCATTATGTTGCCCAAACTTCGAATTCTAGAGAGAAGAGACGCACTCCTGCCTGGTGTGACAGGATTCTATGGAAAGGAGAAGGACTTAAACAAATGTGGTATTTGAGAGGGGAGTCAAAGTTCTCGGACCACAGACCGGTCTATTCTTTGTTTGCTGTCCAAATAAACTTGGCCAGCAAGAAAAAACCCAAACCTGCTGTTCCCATAAGCACAACAAGCAACAGAGTTGGTCCAAATTCTAGGTTGCCAGCGACATGCGTGGCCAAAGTGCAAGCCGAGGAGCTTTTGGTACTCACAAGAGCAAAAAGCTGCTTAGAGACAAGCTCCTCCAGGTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004439 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0030258 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0042578 GO:0044237 GO:0044238 GO:0044255 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0052866 GO:0071704 GO:0106019

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Exo_endo_phos

Protein Analysis

526

Amino Acids

59.07

Weight (kDa)

8.77

Isoelectric Point (pI)

47.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos2	PF22669	94 - 174	5.1e-08	Endonuclease/Exonuclease/phosphatase family 2
Exo_endo_phos2	PF22669	233 - 463	9.4e-63	Endonuclease/Exonuclease/phosphatase family 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005478)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37440 AT2G37440 AT2G37440
fragaria_vesca	FvH4_6g14390 FvH4_6g14390 FvH4_6g14390 FvH4_6g14390 FvH4_6g14390 FvH4_6g14390
malus_domestica	MD04G1120100.v1.1 MD12G1137500.v1.1
prunus_persica	Prupe.6G249400_v2.0.a1 Prupe.6G249400_v2.0.a1 Prupe.6G249400_v2.0.a1 Prupe.6G249400_v2.0.a1
pyrus_communis	pycom04g10930 pycom12g13150
rosa_chinensis	RchiOBHm_Chr3g0467461
rosa_laevigata	RLG00000024503
rosa_multiflora	Rmu_sc0001601.1_g000003
rosa_roxburghii	Rroxscaffold_6G00413660
rosa_rugosa	Rorug03G0087200 Rorug03G0087300 Rorug03G0087400
rosa_samantha	Rh3AG135600 Rh3BG157200 Rh3CG157100 Rh3DG158000
rosa_wichuraiana	Rw3G012880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	164
Acc36I	ACCTGC	1 cut(s)	1444
AccB1I	GGYRCC	1 cut(s)	238
AccBSI	CCGCTC	1 cut(s)	81
AccI	GTMKAC	1 cut(s)	781
AccII	CGCG	2 cut(s)	629, 768
AciI	CCGC	5 cut(s)	4, 81, 419, 596, 627
AclI	AACGTT	1 cut(s)	291
AclWI	GGATC	1 cut(s)	16
AcoI	YGGCCR	2 cut(s)	1413, 1503
AcsI	RAATTY	8 cut(s)	34, 616, 744, 946, 963, 1234, 1264, 1477
AfaI	GTAC	3 cut(s)	174, 691, 1533
AfiI	CCNNNNNNNGG	2 cut(s)	83, 1378
AflII	CTTAAG	1 cut(s)	325
AgeI	ACCGGT	1 cut(s)	1378
AgsI	TTSAA	4 cut(s)	322, 622, 696, 852
AjnI	CCWGG	5 cut(s)	43, 153, 672, 1292, 1571
AjuI	GAANNNNNNNTTGG	2 cut(s)	19, 51
AloI	GAACNNNNNNTCC	2 cut(s)	1346, 1378
Alw21I	GWGCWC	1 cut(s)	904
Alw26I	GTCTC	4 cut(s)	601, 808, 1273, 1553
AlwI	GGATC	1 cut(s)	16
AlwNI	CAGNNNCTG	1 cut(s)	1578
AoxI	GGCC	6 cut(s)	41, 217, 430, 670, 1413, 1503
ApaI	GGGCCC	1 cut(s)	434
ApeKI	GCWGC	7 cut(s)	534, 593, 722, 1076, 1079, 1114, 1551
ApoI	RAATTY	8 cut(s)	34, 616, 744, 946, 963, 1234, 1264, 1477
AsiGI	ACCGGT	1 cut(s)	1378
Asp700I	GAANNNNTTC	1 cut(s)	387
AspLEI	GCGC	3 cut(s)	232, 770, 1088
AsuC2I	CCSGG	1 cut(s)	486
AsuHPI	GGTGA	3 cut(s)	297, 645, 929
AsuII	TTCGAA	1 cut(s)	1262
AsuNHI	GCTAGC	1 cut(s)	1072
AvaII	GGWCC	7 cut(s)	6, 151, 157, 342, 1030, 1369, 1472
BaeGI	GKGCMC	1 cut(s)	434
BalI	TGGCCA	2 cut(s)	1415, 1505
BanI	GGYRCC	1 cut(s)	238
BanII	GRGCYC	1 cut(s)	434
Bbv12I	GWGCWC	1 cut(s)	904
BbvI	GCAGC	7 cut(s)	546, 580, 734, 1066, 1088, 1126, 1538
BccI	CCATC	3 cut(s)	185, 196, 730
BceAI	ACGGC	1 cut(s)	232
BcgI	CGANNNNNNTGC	2 cut(s)	689, 723
BciT130I	CCWGG	5 cut(s)	45, 155, 674, 1294, 1573
BclI	TGATCA	1 cut(s)	523
BcnI	CCSGG	1 cut(s)	486
BcoDI	GTCTC	4 cut(s)	601, 808, 1273, 1553
BfaI	CTAG	4 cut(s)	639, 1073, 1269, 1482
BfmI	CTRYAG	1 cut(s)	1106
BfrI	CTTAAG	1 cut(s)	325
BfuAI	ACCTGC	1 cut(s)	1444
BisI	GCNGC	7 cut(s)	535, 594, 723, 1077, 1080, 1115, 1552
BlpI	GCTNAGC	2 cut(s)	551, 718
BlsI	GCNGC	7 cut(s)	536, 595, 724, 1078, 1081, 1116, 1553
BmcAI	AGTACT	1 cut(s)	691
Bme1390I	CCNGG	6 cut(s)	45, 155, 486, 674, 1294, 1573
Bme18I	GGWCC	7 cut(s)	6, 151, 157, 342, 1030, 1369, 1472
BmiI	GGNNCC	3 cut(s)	240, 344, 432
BmrFI	CCNGG	6 cut(s)	45, 155, 486, 674, 1294, 1573
BmrI	ACTGGG	1 cut(s)	677
BmsI	GCATC	2 cut(s)	454, 531
BmtI	GCTAGC	1 cut(s)	1076
BmuI	ACTGGG	1 cut(s)	677
BplI	GAGNNNNNCTC	3 cut(s)	1270, 1302, 1550
BpmI	CTGGAG	2 cut(s)	66, 1555
Bpu10I	CCTNAGC	1 cut(s)	338
Bpu1102I	GCTNAGC	2 cut(s)	551, 718
Bpu14I	TTCGAA	1 cut(s)	1262
BpuMI	CCSGG	1 cut(s)	486
BsaI	GGTCTC	1 cut(s)	808
BsaJI	CCNNGG	4 cut(s)	484, 545, 673, 1518
BsaWI	WCCGGW	2 cut(s)	175, 1378
BsaXI	ACNNNNNCTCC	6 cut(s)	39, 69, 127, 157, 1346, 1376
Bsc4I	CCNNNNNNNGG	2 cut(s)	83, 1378
Bse118I	RCCGGY	2 cut(s)	1068, 1378
Bse1I	ACTGG	1 cut(s)	672
Bse3DI	GCAATG	1 cut(s)	869
BseBI	CCWGG	5 cut(s)	45, 155, 674, 1294, 1573
BseDI	CCNNGG	4 cut(s)	484, 545, 673, 1518
BseGI	GGATG	1 cut(s)	937
BseLI	CCNNNNNNNGG	2 cut(s)	83, 1378
BseMI	GCAATG	1 cut(s)	869
BseNI	ACTGG	1 cut(s)	672
BseRI	GAGGAG	2 cut(s)	1535, 1558
BseSI	GKGCMC	1 cut(s)	434
BseXI	GCAGC	7 cut(s)	546, 580, 734, 1066, 1088, 1126, 1538
BseYI	CCCAGC	1 cut(s)	433
Bsh1236I	CGCG	2 cut(s)	629, 768
BshFI	GGCC	6 cut(s)	43, 219, 432, 672, 1415, 1505
BshNI	GGYRCC	1 cut(s)	238
BshTI	ACCGGT	1 cut(s)	1378
BsiHKAI	GWGCWC	1 cut(s)	904
BsiSI	CCGG	6 cut(s)	176, 233, 402, 486, 1069, 1379
BslFI	GGGAC	3 cut(s)	101, 295, 328
BslI	CCNNNNNNNGG	2 cut(s)	83, 1378
BsmAI	GTCTC	4 cut(s)	601, 808, 1273, 1553
BsmBI	CGTCTC	1 cut(s)	1273
BsmFI	GGGAC	3 cut(s)	101, 295, 328
BsnI	GGCC	6 cut(s)	43, 219, 432, 672, 1415, 1505
Bso31I	GGTCTC	1 cut(s)	808
Bsp119I	TTCGAA	1 cut(s)	1262
Bsp120I	GGGCCC	1 cut(s)	430
Bsp1286I	GDGCHC	2 cut(s)	434, 904
Bsp143I	GATC	4 cut(s)	21, 523, 772, 1141
Bsp1720I	GCTNAGC	2 cut(s)	551, 718
BspACI	CCGC	5 cut(s)	4, 81, 419, 596, 627
BspANI	GGCC	6 cut(s)	43, 219, 432, 672, 1415, 1505
BspCNI	CTCAG	3 cut(s)	118, 279, 600
BspFNI	CGCG	2 cut(s)	629, 768
BspLI	GGNNCC	3 cut(s)	240, 344, 432
BspMAI	CTGCAG	1 cut(s)	1110
BspMI	ACCTGC	1 cut(s)	1444
BspOI	GCTAGC	1 cut(s)	1076
BspPI	GGATC	1 cut(s)	16
BspT104I	TTCGAA	1 cut(s)	1262
BspT107I	GGYRCC	1 cut(s)	238
BspTI	CTTAAG	1 cut(s)	325
BspTNI	GGTCTC	1 cut(s)	808
BsrBI	CCGCTC	1 cut(s)	81
BsrDI	GCAATG	1 cut(s)	869
BsrFI	RCCGGY	2 cut(s)	1068, 1378
BsrI	ACTGG	1 cut(s)	672
BssAI	RCCGGY	2 cut(s)	1068, 1378
BssECI	CCNNGG	4 cut(s)	484, 545, 673, 1518
BssMI	GATC	4 cut(s)	21, 523, 772, 1141
BssT1I	CCWWGG	1 cut(s)	545
Bst2UI	CCWGG	5 cut(s)	45, 155, 674, 1294, 1573
Bst6I	CTCTTC	2 cut(s)	134, 1271
BstAFI	CTTAAG	1 cut(s)	325
BstBI	TTCGAA	1 cut(s)	1262
BstC8I	GCNNGC	8 cut(s)	727, 731, 1074, 1084, 1125, 1417, 1491, 1515
BstDEI	CTNAG	9 cut(s)	126, 266, 338, 551, 574, 587, 718, 1148, 1555
BstF5I	GGATG	1 cut(s)	937
BstFNI	CGCG	2 cut(s)	629, 768
BstHHI	GCGC	3 cut(s)	232, 770, 1088
BstKTI	GATC	4 cut(s)	24, 526, 775, 1144
BstMAI	GTCTC	4 cut(s)	601, 808, 1273, 1553
BstMBI	GATC	4 cut(s)	21, 523, 772, 1141
BstMWI	GCNNNNNNNGC	5 cut(s)	236, 1085, 1114, 1120, 1458
BstNI	CCWGG	5 cut(s)	45, 155, 674, 1294, 1573
BstNSI	RCATGY	1 cut(s)	1500
BstSCI	CCNGG	6 cut(s)	43, 153, 484, 672, 1292, 1571
BstSFI	CTRYAG	1 cut(s)	1106
BstSLI	GKGCMC	1 cut(s)	434
BstUI	CGCG	2 cut(s)	629, 768
BstV1I	GCAGC	7 cut(s)	546, 580, 734, 1066, 1088, 1126, 1538
BstX2I	RGATCY	1 cut(s)	21
BstYI	RGATCY	1 cut(s)	21
BsuRI	GGCC	6 cut(s)	43, 219, 432, 672, 1415, 1505
BtsCI	GGATG	1 cut(s)	937
BtsIMutI	CAGTG	2 cut(s)	595, 665
BveI	ACCTGC	1 cut(s)	1444
Cac8I	GCNNGC	8 cut(s)	727, 731, 1074, 1084, 1125, 1417, 1491, 1515
CaiI	CAGNNNCTG	1 cut(s)	1578
CfoI	GCGC	3 cut(s)	232, 770, 1088
Cfr10I	RCCGGY	2 cut(s)	1068, 1378
CseI	GACGC	3 cut(s)	218, 618, 1290
Csp6I	GTAC	3 cut(s)	173, 690, 1532
CspAI	ACCGGT	1 cut(s)	1378
CviAII	CATG	9 cut(s)	285, 538, 796, 807, 865, 993, 1034, 1097, 1497
CviQI	GTAC	3 cut(s)	173, 690, 1532
DdeI	CTNAG	9 cut(s)	126, 266, 338, 551, 574, 587, 718, 1148, 1555
DpnI	GATC	4 cut(s)	23, 525, 774, 1143
DpnII	GATC	4 cut(s)	21, 523, 772, 1141
DraI	TTTAAA	4 cut(s)	396, 969, 1062, 1180
DrdI	GACNNNNNNGTC	1 cut(s)	164
DseDI	GACNNNNNNGTC	1 cut(s)	164
EaeI	YGGCCR	2 cut(s)	1413, 1503
Eam1104I	CTCTTC	2 cut(s)	134, 1271
EarI	CTCTTC	2 cut(s)	134, 1271
Eco130I	CCWWGG	1 cut(s)	545
Eco24I	GRGCYC	1 cut(s)	434
Eco31I	GGTCTC	1 cut(s)	808
Eco32I	GATATC	2 cut(s)	361, 833
Eco47I	GGWCC	7 cut(s)	6, 151, 157, 342, 1030, 1369, 1472
EcoO109I	RGGNCCY	2 cut(s)	342, 430
EcoRI	GAATTC	3 cut(s)	34, 946, 1264
EcoRII	CCWGG	5 cut(s)	43, 153, 672, 1292, 1571
EcoRV	GATATC	2 cut(s)	361, 833
EcoT14I	CCWWGG	1 cut(s)	545
EcoT38I	GRGCYC	1 cut(s)	434
ErhI	CCWWGG	1 cut(s)	545
Esp3I	CGTCTC	1 cut(s)	1273
FaeI	CATG	9 cut(s)	288, 541, 799, 810, 868, 996, 1037, 1100, 1500
FaqI	GGGAC	3 cut(s)	101, 295, 328
FatI	CATG	9 cut(s)	284, 537, 795, 806, 864, 992, 1033, 1096, 1496
FauI	CCCGC	1 cut(s)	634
FbaI	TGATCA	1 cut(s)	523
FblI	GTMKAC	1 cut(s)	781
Fnu4HI	GCNGC	7 cut(s)	535, 594, 723, 1077, 1080, 1115, 1552
FokI	GGATG	1 cut(s)	944
FriOI	GRGCYC	1 cut(s)	434
Fsp4HI	GCNGC	7 cut(s)	535, 594, 723, 1077, 1080, 1115, 1552
FspBI	CTAG	4 cut(s)	639, 1073, 1269, 1482
GlaI	GCGC	3 cut(s)	231, 769, 1087
GluI	GCNGC	7 cut(s)	535, 594, 723, 1077, 1080, 1115, 1552
GsaI	CCCAGC	1 cut(s)	437
GsuI	CTGGAG	2 cut(s)	66, 1555
HaeIII	GGCC	6 cut(s)	43, 219, 432, 672, 1415, 1505
HapII	CCGG	6 cut(s)	176, 233, 402, 486, 1069, 1379
HgaI	GACGC	3 cut(s)	218, 618, 1290
HhaI	GCGC	3 cut(s)	232, 770, 1088
Hin1II	CATG	9 cut(s)	288, 541, 799, 810, 868, 996, 1037, 1100, 1500
Hin6I	GCGC	3 cut(s)	230, 768, 1086
HinP1I	GCGC	3 cut(s)	230, 768, 1086
HincII	GTYRAC	1 cut(s)	633
HindII	GTYRAC	1 cut(s)	633
HinfI	GANTC	2 cut(s)	1306, 1355
HpaII	CCGG	6 cut(s)	176, 233, 402, 486, 1069, 1379
HphI	GGTGA	3 cut(s)	297, 645, 929
Hpy166II	GTNNAC	2 cut(s)	633, 782
Hpy188I	TCNGA	8 cut(s)	78, 103, 151, 269, 562, 952, 1369, 1580
Hpy188III	TCNNGA	4 cut(s)	380, 461, 1016, 1269
Hpy8I	GTNNAC	2 cut(s)	633, 782
Hpy99I	CGWCG	2 cut(s)	170, 173
HpyAV	CCTTC	4 cut(s)	793, 920, 1187, 1316
HpyCH4IV	ACGT	2 cut(s)	165, 291
HpyCH4V	TGCA	6 cut(s)	682, 700, 874, 1108, 1232, 1513
HpyF10VI	GCNNNNNNNGC	5 cut(s)	236, 1085, 1114, 1120, 1458
HpyF3I	CTNAG	9 cut(s)	126, 266, 338, 551, 574, 587, 718, 1148, 1555
HpySE526I	ACGT	2 cut(s)	165, 291
Hsp92II	CATG	9 cut(s)	288, 541, 799, 810, 868, 996, 1037, 1100, 1500
HspAI	GCGC	3 cut(s)	230, 768, 1086
Ksp22I	TGATCA	1 cut(s)	523
Kzo9I	GATC	4 cut(s)	21, 523, 772, 1141
LmnI	GCTCC	4 cut(s)	47, 1216, 1522, 1571
Lsp1109I	GCAGC	7 cut(s)	546, 580, 734, 1066, 1088, 1126, 1538
LweI	GCATC	2 cut(s)	454, 531
MaeI	CTAG	4 cut(s)	639, 1073, 1269, 1482
MaeII	ACGT	2 cut(s)	165, 291
MaeIII	GTNAC	4 cut(s)	121, 184, 247, 1298
MalI	GATC	4 cut(s)	23, 525, 774, 1143
MbiI	CCGCTC	1 cut(s)	81
MboI	GATC	4 cut(s)	21, 523, 772, 1141
MboII	GAAGA	4 cut(s)	151, 590, 1202, 1288
MflI	RGATCY	1 cut(s)	21
MhlI	GDGCHC	2 cut(s)	434, 904
MlsI	TGGCCA	2 cut(s)	1415, 1505
MluNI	TGGCCA	2 cut(s)	1415, 1505
MlyI	GAGTC	1 cut(s)	1364
MmeI	TCCRAC	3 cut(s)	274, 285, 1238
Mox20I	TGGCCA	2 cut(s)	1415, 1505
MroXI	GAANNNNTTC	1 cut(s)	387
MscI	TGGCCA	2 cut(s)	1415, 1505
MseI	TTAA	8 cut(s)	326, 395, 471, 908, 968, 1061, 1179, 1329
Msp20I	TGGCCA	2 cut(s)	1415, 1505
MspA1I	CMGCKG	3 cut(s)	245, 437, 1079
MspCI	CTTAAG	1 cut(s)	325
MspI	CCGG	6 cut(s)	176, 233, 402, 486, 1069, 1379
MspR9I	CCNGG	6 cut(s)	45, 155, 486, 674, 1294, 1573
MvaI	CCWGG	5 cut(s)	45, 155, 674, 1294, 1573
MvnI	CGCG	2 cut(s)	629, 768
MwoI	GCNNNNNNNGC	5 cut(s)	236, 1085, 1114, 1120, 1458
NciI	CCSGG	1 cut(s)	486
NdeII	GATC	4 cut(s)	21, 523, 772, 1141
NheI	GCTAGC	1 cut(s)	1072
NlaIII	CATG	9 cut(s)	288, 541, 799, 810, 868, 996, 1037, 1100, 1500
NlaIV	GGNNCC	3 cut(s)	240, 344, 432
NmeAIII	GCCGAG	1 cut(s)	1543
NmuCI	GTSAC	2 cut(s)	247, 1298
NspI	RCATGY	1 cut(s)	1500
NspV	TTCGAA	1 cut(s)	1262
PcsI	WCGNNNNNNNCGW	1 cut(s)	177
PdmI	GAANNNNTTC	1 cut(s)	387
PfeI	GAWTC	1 cut(s)	1306
PinAI	ACCGGT	1 cut(s)	1378
PkrI	GCNGC	7 cut(s)	536, 595, 724, 1078, 1081, 1116, 1553
PleI	GAGTC	1 cut(s)	1363
PpsI	GAGTC	1 cut(s)	1363
PpuMI	RGGWCCY	1 cut(s)	342
Psp1406I	AACGTT	1 cut(s)	291
Psp5II	RGGWCCY	1 cut(s)	342
Psp6I	CCWGG	5 cut(s)	43, 153, 672, 1292, 1571
PspFI	CCCAGC	1 cut(s)	433
PspGI	CCWGG	5 cut(s)	43, 153, 672, 1292, 1571
PspN4I	GGNNCC	3 cut(s)	240, 344, 432
PspOMI	GGGCCC	1 cut(s)	430
PspPPI	RGGWCCY	1 cut(s)	342
PstI	CTGCAG	1 cut(s)	1110
PstNI	CAGNNNCTG	1 cut(s)	1578
PsuI	RGATCY	1 cut(s)	21
PvuII	CAGCTG	3 cut(s)	245, 437, 1079
RsaI	GTAC	3 cut(s)	174, 691, 1533
RsaNI	GTAC	3 cut(s)	173, 690, 1532
SaqAI	TTAA	8 cut(s)	326, 395, 471, 908, 968, 1061, 1179, 1329
SatI	GCNGC	7 cut(s)	535, 594, 723, 1077, 1080, 1115, 1552
Sau3AI	GATC	4 cut(s)	21, 523, 772, 1141
ScaI	AGTACT	1 cut(s)	691
SchI	GAGTC	1 cut(s)	1364
ScrFI	CCNGG	6 cut(s)	45, 155, 486, 674, 1294, 1573
SduI	GDGCHC	2 cut(s)	434, 904
SfaNI	GCATC	2 cut(s)	454, 531
SfcI	CTRYAG	1 cut(s)	1106
SfuI	TTCGAA	1 cut(s)	1262
SinI	GGWCC	7 cut(s)	6, 151, 157, 342, 1030, 1369, 1472
SmiI	ATTTAAAT	1 cut(s)	1062
SmlI	CTYRAG	1 cut(s)	325
SmoI	CTYRAG	1 cut(s)	325
SsiI	CCGC	5 cut(s)	4, 81, 419, 596, 627
SspMI	CTAG	4 cut(s)	639, 1073, 1269, 1482
StyD4I	CCNGG	6 cut(s)	43, 153, 484, 672, 1292, 1571
StyI	CCWWGG	1 cut(s)	545
SwaI	ATTTAAAT	1 cut(s)	1062
TaiI	ACGT	2 cut(s)	168, 294
TaqI	TCGA	4 cut(s)	460, 817, 960, 1262
TaqII	GACCGA	1 cut(s)	266
TatI	WGTACW	1 cut(s)	689
TfiI	GAWTC	1 cut(s)	1306
Tru1I	TTAA	8 cut(s)	326, 395, 471, 908, 968, 1061, 1179, 1329
Tru9I	TTAA	8 cut(s)	326, 395, 471, 908, 968, 1061, 1179, 1329
TscAI	CASTG	2 cut(s)	595, 672
TseFI	GTSAC	2 cut(s)	247, 1298
TseI	GCWGC	7 cut(s)	534, 593, 722, 1076, 1079, 1114, 1551
Tsp45I	GTSAC	2 cut(s)	247, 1298
TspDTI	ATGAA	4 cut(s)	86, 597, 812, 953
TspRI	CASTG	2 cut(s)	595, 672
Vha464I	CTTAAG	1 cut(s)	325
VpaK11BI	GGWCC	7 cut(s)	6, 151, 157, 342, 1030, 1369, 1472
XapI	RAATTY	8 cut(s)	34, 616, 744, 946, 963, 1234, 1264, 1477
XbaI	TCTAGA	1 cut(s)	1268
XceI	RCATGY	1 cut(s)	1500
XcmI	CCANNNNNNNNNTGG	1 cut(s)	441
XmiI	GTMKAC	1 cut(s)	781
XmnI	GAANNNNTTC	1 cut(s)	387
XspI	CTAG	4 cut(s)	639, 1073, 1269, 1482
ZrmI	AGTACT	1 cut(s)	691

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.