Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0005478

Physical Location & Seq

Genomic Coordinates Reverse (-)

13138424 .. 13149744

Gene Structure 11321 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG157100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1668 bp

ATGCGGACCAACAGAGGAAAGATCCCAAAGAACTCGTGGCCTGGAGCTGTAGTGAGGAAATGGCTCAACATTCCGACCGGAGGGGACGAGTTTCATTCCGATTACTCTGTAAAAAATGTAACTGAGAGTAGGAGGAAGAGTTGCTCGGACCAGGACCACTACGTCGTCGTACCGGACGATGTTGCAGATGATTGGTTGATGGAGGACGCTTACGGCCCAAGTTTTGCGCCGGAGGCACCAGCTGTGACCGACCATCTCAACCTCAGAATGTTCGTGGGGACATGGAACGTTGGAGGCAAATCACCACAAGAGGACTTGAACTTAAGGGAATGGCTTAGGTCCCCAACTCCTGCCGATATCTATGTTCTTGGGTTTCAGGAAATTGTTCCTTTAAACGCCGGTAATGTATTGGGTGCAGAGGACAAAGGCCCAGCTGACAAGTGGCTTTCCCTTATTCGAGATGCTCTTAACAAGAATGACCCCGGACTTCCTAATAATTACAACAATGCCACCCATAATGATCAGCAATCACATCTTGATCAGCAAGGCAGCATGATGCCAAGGCTCAGCTTCTCGGACTTGCTTTCCTTAGAAGATGAACTCAGTACTGCGGACTTCGAGACACTGCTGAATTTGAATCCCGCGTCAACTTCTAGTGGAGAAAGCTCACCGAGCTCCCCACTGGGGCTGGGTATGCAGGAGAGTACTTCAATGCAACAACATCGTTATTGCTTAGCAGCGAGCAAGCAGATGGTGGGAATTTTCTTGTGTGTGTGGGTTCGCGCTGATCTTTGTACACACATTAGCAACATGAAGGTCTCATGTGTTGGTCGAGGCATAATGGGATATCTTGGAAATAAGGGTTCAATATCAATAAGCATGACATTGCATAAAACAACCTTTTGCTTTGTCTGTGCTCACTTAACTTCTGGTGAGAAAGAAGGGGATGAGATGAAAAGGAATTCAGATGTCATTGAAATTTTAAAGAAAACAAAGTTTTCTAACTCATGTAGAACACGACCACTTCCTCCTGATAGCATATTGGACCATGACAAGATTATTTGGCTTGGGGATTTAAATTACCGGCTAGCAGCTGCTTGCGCTGACACACATGAGCTTCTGCAGAAGCATCATTGGCAAGCACTTTTAGAGAAAGATCAGCTAAGAATAGAGCAACAAGCTGGTAGAGTATTTAAAGGGTGGGAAGAAGGGAGGATATATTTTGCTCCAACTTACAAATACCTTGCAAATTCTAATCATTATGTTGCCCAAACTTCGAATTCTAGAGAGAAGAGACGCACTCCTGCCTGGTGTGACAGGATTCTATGGAAAGGAGAAGGACTTAAACAAATGTGGTATTTGAGAGGGGAGTCAAAGTTCTCGGACCACAGACCGGTCTATTCTTTGTTTGCGGTCCAAATAAACTTGGCCAGCAAGAAAAAACCCAAACCTGCTGTTCCCATAAGCACAACAAGCAACAGAGTTGGTCCAAATTCTCGGTTGCCAGCGGCATGCGTGGCCAAAGTGCAAGCCGAGGAGCTTTTGTCGCCGGCGCGTTTCACGGTGATTCTAACGCCGGAAAGTTCATCCGTTCCTGCTCACAGATCTCCCCGCGATCGCCGCCCTGAGCTTCCCACTTCAGATAACATCAATGTGCATTGTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004439 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0030258 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0042578 GO:0044237 GO:0044238 GO:0044255 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0052866 GO:0071704 GO:0106019

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Exo_endo_phos

Protein Analysis

555

Amino Acids

62.23

Weight (kDa)

7.92

Isoelectric Point (pI)

52.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos2	PF22669	93 - 167	2e-08	Endonuclease/Exonuclease/phosphatase family 2
Exo_endo_phos2	PF22669	238 - 468	5.8e-63	Endonuclease/Exonuclease/phosphatase family 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005478)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37440 AT2G37440 AT2G37440
fragaria_vesca	FvH4_6g14390 FvH4_6g14390 FvH4_6g14390 FvH4_6g14390 FvH4_6g14390 FvH4_6g14390
malus_domestica	MD04G1120100.v1.1 MD12G1137500.v1.1
prunus_persica	Prupe.6G249400_v2.0.a1 Prupe.6G249400_v2.0.a1 Prupe.6G249400_v2.0.a1 Prupe.6G249400_v2.0.a1
pyrus_communis	pycom04g10930 pycom12g13150
rosa_chinensis	RchiOBHm_Chr3g0467461
rosa_laevigata	RLG00000024503
rosa_multiflora	Rmu_sc0001601.1_g000003
rosa_roxburghii	Rroxscaffold_6G00413660
rosa_rugosa	Rorug03G0087200 Rorug03G0087300 Rorug03G0087400
rosa_samantha	Rh3AG135600 Rh3BG157200 Rh3CG157100 Rh3DG158000
rosa_wichuraiana	Rw3G012880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	161
Acc36I	ACCTGC	1 cut(s)	1459
AccB1I	GGYRCC	1 cut(s)	235
AccII	CGCG	4 cut(s)	644, 783, 1555, 1614
AciI	CCGC	7 cut(s)	4, 611, 642, 1412, 1508, 1612, 1621
AclI	AACGTT	1 cut(s)	288
AclWI	GGATC	1 cut(s)	16
AcoI	YGGCCR	2 cut(s)	1428, 1518
AcsI	RAATTY	7 cut(s)	631, 759, 961, 978, 1249, 1279, 1492
AcuI	CTGAAG	1 cut(s)	1623
AfaI	GTAC	4 cut(s)	171, 607, 706, 796
AfiI	CCNNNNNNNGG	3 cut(s)	80, 684, 1393
AflII	CTTAAG	1 cut(s)	322
AgeI	ACCGGT	1 cut(s)	1393
AgsI	TTSAA	5 cut(s)	319, 637, 711, 867, 977
AjnI	CCWGG	3 cut(s)	40, 150, 1307
AloI	GAACNNNNNNTCC	2 cut(s)	1361, 1393
Alw21I	GWGCWC	2 cut(s)	677, 919
Alw26I	GTCTC	3 cut(s)	614, 823, 1288
AlwI	GGATC	1 cut(s)	16
AoxI	GGCC	5 cut(s)	38, 214, 427, 1428, 1518
ApeKI	GCWGC	4 cut(s)	549, 737, 1091, 1094
ApoI	RAATTY	7 cut(s)	631, 759, 961, 978, 1249, 1279, 1492
AsiGI	ACCGGT	1 cut(s)	1393
AsiSI	GCGATCGC	1 cut(s)	1618
Asp700I	GAANNNNTTC	1 cut(s)	384
AspLEI	GCGC	4 cut(s)	229, 785, 1103, 1555
AsuC2I	CCSGG	1 cut(s)	483
AsuHPI	GGTGA	4 cut(s)	294, 660, 944, 1576
AsuII	TTCGAA	1 cut(s)	1277
AsuNHI	GCTAGC	1 cut(s)	1087
AvaII	GGWCC	8 cut(s)	6, 148, 154, 339, 1045, 1384, 1414, 1487
BalI	TGGCCA	2 cut(s)	1430, 1520
BanI	GGYRCC	1 cut(s)	235
BanII	GRGCYC	1 cut(s)	677
BauI	CACGAG	1 cut(s)	34
Bbv12I	GWGCWC	2 cut(s)	677, 919
BbvI	GCAGC	4 cut(s)	561, 749, 1081, 1103
BccI	CCATC	3 cut(s)	193, 261, 745
BceAI	ACGGC	1 cut(s)	229
BcgI	CGANNNNNNTGC	2 cut(s)	704, 738
BciT130I	CCWGG	3 cut(s)	42, 152, 1309
BclI	TGATCA	2 cut(s)	520, 538
BcnI	CCSGG	1 cut(s)	483
BcoDI	GTCTC	3 cut(s)	614, 823, 1288
BfaI	CTAG	3 cut(s)	654, 1088, 1284
BfmI	CTRYAG	2 cut(s)	48, 1121
BfrI	CTTAAG	1 cut(s)	322
BfuAI	ACCTGC	1 cut(s)	1459
BglII	AGATCT	1 cut(s)	1604
BisI	GCNGC	6 cut(s)	550, 738, 1092, 1095, 1509, 1621
BlpI	GCTNAGC	2 cut(s)	566, 733
BlsI	GCNGC	6 cut(s)	551, 739, 1093, 1096, 1510, 1622
BmcAI	AGTACT	2 cut(s)	607, 706
Bme1390I	CCNGG	4 cut(s)	42, 152, 483, 1309
Bme18I	GGWCC	8 cut(s)	6, 148, 154, 339, 1045, 1384, 1414, 1487
BmiI	GGNNCC	2 cut(s)	237, 341
BmrFI	CCNGG	4 cut(s)	42, 152, 483, 1309
BmrI	ACTGGG	1 cut(s)	692
BmsI	GCATC	3 cut(s)	451, 546, 1138
BmtI	GCTAGC	1 cut(s)	1091
BmuI	ACTGGG	1 cut(s)	692
BplI	GAGNNNNNCTC	2 cut(s)	1285, 1317
BpmI	CTGGAG	1 cut(s)	63
Bpu10I	CCTNAGC	2 cut(s)	335, 1626
Bpu1102I	GCTNAGC	2 cut(s)	566, 733
Bpu14I	TTCGAA	1 cut(s)	1277
BpuMI	CCSGG	1 cut(s)	483
BsaI	GGTCTC	1 cut(s)	823
BsaJI	CCNNGG	3 cut(s)	481, 560, 1533
BsaWI	WCCGGW	3 cut(s)	77, 172, 1393
BsaXI	ACNNNNNCTCC	8 cut(s)	36, 66, 124, 154, 1361, 1391, 1529, 1559
Bsc4I	CCNNNNNNNGG	3 cut(s)	80, 684, 1393
Bse118I	RCCGGY	4 cut(s)	398, 1083, 1393, 1549
Bse1I	ACTGG	1 cut(s)	687
Bse3DI	GCAATG	1 cut(s)	884
BseBI	CCWGG	3 cut(s)	42, 152, 1309
BseDI	CCNNGG	3 cut(s)	481, 560, 1533
BseGI	GGATG	2 cut(s)	952, 1586
BseLI	CCNNNNNNNGG	3 cut(s)	80, 684, 1393
BseMI	GCAATG	1 cut(s)	884
BseMII	CTCAG	5 cut(s)	114, 277, 580, 616, 1617
BseNI	ACTGG	1 cut(s)	687
BseRI	GAGGAG	1 cut(s)	1550
BseXI	GCAGC	4 cut(s)	561, 749, 1081, 1103
BseYI	CCCAGC	2 cut(s)	430, 688
BsgI	GTGCAG	1 cut(s)	435
Bsh1236I	CGCG	4 cut(s)	644, 783, 1555, 1614
Bsh1285I	CGRYCG	2 cut(s)	78, 1618
BshFI	GGCC	5 cut(s)	40, 216, 429, 1430, 1520
BshNI	GGYRCC	1 cut(s)	235
BshTI	ACCGGT	1 cut(s)	1393
BsiEI	CGRYCG	2 cut(s)	78, 1618
BsiHKAI	GWGCWC	2 cut(s)	677, 919
BsiSI	CCGG	9 cut(s)	78, 173, 230, 399, 483, 1084, 1394, 1550, 1577
BslFI	GGGAC	3 cut(s)	98, 292, 325
BslI	CCNNNNNNNGG	3 cut(s)	80, 684, 1393
BsmAI	GTCTC	3 cut(s)	614, 823, 1288
BsmBI	CGTCTC	1 cut(s)	1288
BsmFI	GGGAC	3 cut(s)	98, 292, 325
BsnI	GGCC	5 cut(s)	40, 216, 429, 1430, 1520
Bso31I	GGTCTC	1 cut(s)	823
Bsp119I	TTCGAA	1 cut(s)	1277
Bsp1286I	GDGCHC	2 cut(s)	677, 919
Bsp1407I	TGTACA	1 cut(s)	794
Bsp143I	GATC	7 cut(s)	21, 520, 538, 787, 1156, 1604, 1615
Bsp1720I	GCTNAGC	2 cut(s)	566, 733
BspACI	CCGC	7 cut(s)	4, 611, 642, 1412, 1508, 1612, 1621
BspANI	GGCC	5 cut(s)	40, 216, 429, 1430, 1520
BspCNI	CTCAG	5 cut(s)	115, 276, 579, 615, 1618
BspFNI	CGCG	4 cut(s)	644, 783, 1555, 1614
BspLI	GGNNCC	2 cut(s)	237, 341
BspMAI	CTGCAG	1 cut(s)	1125
BspMI	ACCTGC	1 cut(s)	1459
BspOI	GCTAGC	1 cut(s)	1091
BspPI	GGATC	1 cut(s)	16
BspT104I	TTCGAA	1 cut(s)	1277
BspT107I	GGYRCC	1 cut(s)	235
BspTI	CTTAAG	1 cut(s)	322
BspTNI	GGTCTC	1 cut(s)	823
BsrDI	GCAATG	1 cut(s)	884
BsrFI	RCCGGY	4 cut(s)	398, 1083, 1393, 1549
BsrGI	TGTACA	1 cut(s)	794
BsrI	ACTGG	1 cut(s)	687
BssAI	RCCGGY	4 cut(s)	398, 1083, 1393, 1549
BssECI	CCNNGG	3 cut(s)	481, 560, 1533
BssMI	GATC	7 cut(s)	21, 520, 538, 787, 1156, 1604, 1615
BssSI	CACGAG	1 cut(s)	34
BssT1I	CCWWGG	1 cut(s)	560
Bst2BI	CACGAG	1 cut(s)	34
Bst2UI	CCWGG	3 cut(s)	42, 152, 1309
Bst4CI	ACNGT	1 cut(s)	1564
Bst6I	CTCTTC	2 cut(s)	131, 1286
BstAFI	CTTAAG	1 cut(s)	322
BstAUI	TGTACA	1 cut(s)	794
BstBI	TTCGAA	1 cut(s)	1277
BstDEI	CTNAG	9 cut(s)	123, 263, 335, 566, 589, 602, 733, 1163, 1626
BstF5I	GGATG	2 cut(s)	952, 1586
BstFNI	CGCG	4 cut(s)	644, 783, 1555, 1614
BstHHI	GCGC	4 cut(s)	229, 785, 1103, 1555
BstKTI	GATC	7 cut(s)	24, 523, 541, 790, 1159, 1607, 1618
BstMAI	GTCTC	3 cut(s)	614, 823, 1288
BstMBI	GATC	7 cut(s)	21, 520, 538, 787, 1156, 1604, 1615
BstMCI	CGRYCG	2 cut(s)	78, 1618
BstMWI	GCNNNNNNNGC	9 cut(s)	233, 672, 694, 1100, 1135, 1473, 1517, 1546, 1620
BstNI	CCWGG	3 cut(s)	42, 152, 1309
BstNSI	RCATGY	1 cut(s)	1515
BstSCI	CCNGG	4 cut(s)	40, 150, 481, 1307
BstSFI	CTRYAG	2 cut(s)	48, 1121
BstUI	CGCG	4 cut(s)	644, 783, 1555, 1614
BstV1I	GCAGC	4 cut(s)	561, 749, 1081, 1103
BstX2I	RGATCY	2 cut(s)	21, 1604
BstYI	RGATCY	2 cut(s)	21, 1604
BsuRI	GGCC	5 cut(s)	40, 216, 429, 1430, 1520
BtsCI	GGATG	2 cut(s)	952, 1586
BtsI	GCAGTG	1 cut(s)	623
BtsIMutI	CAGTG	2 cut(s)	623, 680
BveI	ACCTGC	1 cut(s)	1459
CfoI	GCGC	4 cut(s)	229, 785, 1103, 1555
Cfr10I	RCCGGY	4 cut(s)	398, 1083, 1393, 1549
CseI	GACGC	3 cut(s)	215, 633, 1305
Csp6I	GTAC	4 cut(s)	170, 606, 705, 795
CspAI	ACCGGT	1 cut(s)	1393
CviAII	CATG	9 cut(s)	282, 553, 811, 822, 880, 1008, 1049, 1112, 1512
CviQI	GTAC	4 cut(s)	170, 606, 705, 795
DdeI	CTNAG	9 cut(s)	123, 263, 335, 566, 589, 602, 733, 1163, 1626
DpnI	GATC	7 cut(s)	23, 522, 540, 789, 1158, 1606, 1617
DpnII	GATC	7 cut(s)	21, 520, 538, 787, 1156, 1604, 1615
DraI	TTTAAA	4 cut(s)	393, 984, 1077, 1195
DrdI	GACNNNNNNGTC	1 cut(s)	161
DseDI	GACNNNNNNGTC	1 cut(s)	161
EaeI	YGGCCR	2 cut(s)	1428, 1518
Eam1104I	CTCTTC	2 cut(s)	131, 1286
EarI	CTCTTC	2 cut(s)	131, 1286
Ecl136II	GAGCTC	1 cut(s)	675
Eco130I	CCWWGG	1 cut(s)	560
Eco24I	GRGCYC	1 cut(s)	677
Eco31I	GGTCTC	1 cut(s)	823
Eco32I	GATATC	2 cut(s)	358, 848
Eco47I	GGWCC	8 cut(s)	6, 148, 154, 339, 1045, 1384, 1414, 1487
Eco53kI	GAGCTC	1 cut(s)	675
Eco57I	CTGAAG	1 cut(s)	1623
EcoICRI	GAGCTC	1 cut(s)	675
EcoO109I	RGGNCCY	1 cut(s)	339
EcoRI	GAATTC	2 cut(s)	961, 1279
EcoRII	CCWGG	3 cut(s)	40, 150, 1307
EcoRV	GATATC	2 cut(s)	358, 848
EcoT14I	CCWWGG	1 cut(s)	560
EcoT38I	GRGCYC	1 cut(s)	677
ErhI	CCWWGG	1 cut(s)	560
Esp3I	CGTCTC	1 cut(s)	1288
FaeI	CATG	9 cut(s)	285, 556, 814, 825, 883, 1011, 1052, 1115, 1515
FaqI	GGGAC	3 cut(s)	98, 292, 325
FatI	CATG	9 cut(s)	281, 552, 810, 821, 879, 1007, 1048, 1111, 1511
FauI	CCCGC	2 cut(s)	649, 1619
FbaI	TGATCA	2 cut(s)	520, 538
Fnu4HI	GCNGC	6 cut(s)	550, 738, 1092, 1095, 1509, 1621
FokI	GGATG	2 cut(s)	959, 1573
FriOI	GRGCYC	1 cut(s)	677
Fsp4HI	GCNGC	6 cut(s)	550, 738, 1092, 1095, 1509, 1621
FspBI	CTAG	3 cut(s)	654, 1088, 1284
GlaI	GCGC	4 cut(s)	228, 784, 1102, 1554
GluI	GCNGC	6 cut(s)	550, 738, 1092, 1095, 1509, 1621
GsaI	CCCAGC	2 cut(s)	434, 692
GsuI	CTGGAG	1 cut(s)	63
HaeIII	GGCC	5 cut(s)	40, 216, 429, 1430, 1520
HapII	CCGG	9 cut(s)	78, 173, 230, 399, 483, 1084, 1394, 1550, 1577
HgaI	GACGC	3 cut(s)	215, 633, 1305
HhaI	GCGC	4 cut(s)	229, 785, 1103, 1555
Hin1II	CATG	9 cut(s)	285, 556, 814, 825, 883, 1011, 1052, 1115, 1515
Hin6I	GCGC	4 cut(s)	227, 783, 1101, 1553
HinP1I	GCGC	4 cut(s)	227, 783, 1101, 1553
HincII	GTYRAC	1 cut(s)	648
HindII	GTYRAC	1 cut(s)	648
HinfI	GANTC	4 cut(s)	637, 1321, 1370, 1567
HpaII	CCGG	9 cut(s)	78, 173, 230, 399, 483, 1084, 1394, 1550, 1577
HphI	GGTGA	4 cut(s)	294, 660, 944, 1576
Hpy166II	GTNNAC	2 cut(s)	648, 797
Hpy188I	TCNGA	8 cut(s)	75, 100, 148, 266, 577, 967, 1384, 1642
Hpy188III	TCNNGA	6 cut(s)	377, 458, 536, 619, 1031, 1284
Hpy8I	GTNNAC	2 cut(s)	648, 797
Hpy99I	CGWCG	2 cut(s)	167, 170
HpyAV	CCTTC	4 cut(s)	808, 935, 1202, 1331
HpyCH4III	ACNGT	1 cut(s)	1564
HpyCH4IV	ACGT	2 cut(s)	162, 288
HpyCH4V	TGCA	9 cut(s)	185, 416, 697, 715, 889, 1123, 1247, 1528, 1657
HpyF10VI	GCNNNNNNNGC	9 cut(s)	233, 672, 694, 1100, 1135, 1473, 1517, 1546, 1620
HpyF3I	CTNAG	9 cut(s)	123, 263, 335, 566, 589, 602, 733, 1163, 1626
HpySE526I	ACGT	2 cut(s)	162, 288
Hsp92II	CATG	9 cut(s)	285, 556, 814, 825, 883, 1011, 1052, 1115, 1515
HspAI	GCGC	4 cut(s)	227, 783, 1101, 1553
KroI	GCCGGC	1 cut(s)	1549
KroNI	GCCGGC	1 cut(s)	1551
Ksp22I	TGATCA	2 cut(s)	520, 538
Kzo9I	GATC	7 cut(s)	21, 520, 538, 787, 1156, 1604, 1615
LmnI	GCTCC	4 cut(s)	44, 680, 1231, 1537
Lsp1109I	GCAGC	4 cut(s)	561, 749, 1081, 1103
LweI	GCATC	3 cut(s)	451, 546, 1138
MaeI	CTAG	3 cut(s)	654, 1088, 1284
MaeII	ACGT	2 cut(s)	162, 288
MaeIII	GTNAC	3 cut(s)	118, 244, 1313
MalI	GATC	7 cut(s)	23, 522, 540, 789, 1158, 1606, 1617
MboI	GATC	7 cut(s)	21, 520, 538, 787, 1156, 1604, 1615
MboII	GAAGA	4 cut(s)	148, 605, 1217, 1303
MflI	RGATCY	2 cut(s)	21, 1604
MhlI	GDGCHC	2 cut(s)	677, 919
MlsI	TGGCCA	2 cut(s)	1430, 1520
MluNI	TGGCCA	2 cut(s)	1430, 1520
MlyI	GAGTC	1 cut(s)	1379
MmeI	TCCRAC	3 cut(s)	98, 271, 1253
Mox20I	TGGCCA	2 cut(s)	1430, 1520
MreI	CGCCGGCG	1 cut(s)	1549
MroNI	GCCGGC	1 cut(s)	1549
MroXI	GAANNNNTTC	1 cut(s)	384
MscI	TGGCCA	2 cut(s)	1430, 1520
MseI	TTAA	8 cut(s)	323, 392, 468, 923, 983, 1076, 1194, 1344
MslI	CAYNNNNRTG	1 cut(s)	1652
Msp20I	TGGCCA	2 cut(s)	1430, 1520
MspA1I	CMGCKG	4 cut(s)	242, 434, 1094, 1508
MspCI	CTTAAG	1 cut(s)	322
MspI	CCGG	9 cut(s)	78, 173, 230, 399, 483, 1084, 1394, 1550, 1577
MspR9I	CCNGG	4 cut(s)	42, 152, 483, 1309
MvaI	CCWGG	3 cut(s)	42, 152, 1309
MvnI	CGCG	4 cut(s)	644, 783, 1555, 1614
MwoI	GCNNNNNNNGC	9 cut(s)	233, 672, 694, 1100, 1135, 1473, 1517, 1546, 1620
NaeI	GCCGGC	1 cut(s)	1551
NciI	CCSGG	1 cut(s)	483
NdeII	GATC	7 cut(s)	21, 520, 538, 787, 1156, 1604, 1615
NgoMIV	GCCGGC	1 cut(s)	1549
NheI	GCTAGC	1 cut(s)	1087
NlaIII	CATG	9 cut(s)	285, 556, 814, 825, 883, 1011, 1052, 1115, 1515
NlaIV	GGNNCC	2 cut(s)	237, 341
NmeAIII	GCCGAG	1 cut(s)	1558
NmuCI	GTSAC	2 cut(s)	244, 1313
NspI	RCATGY	1 cut(s)	1515
NspV	TTCGAA	1 cut(s)	1277
PaeI	GCATGC	1 cut(s)	1515
PcsI	WCGNNNNNNNCGW	1 cut(s)	174
PdiI	GCCGGC	1 cut(s)	1551
PdmI	GAANNNNTTC	1 cut(s)	384
PfeI	GAWTC	3 cut(s)	637, 1321, 1567
PinAI	ACCGGT	1 cut(s)	1393
PkrI	GCNGC	6 cut(s)	551, 739, 1093, 1096, 1510, 1622
Ple19I	CGATCG	1 cut(s)	1618
PleI	GAGTC	1 cut(s)	1378
PpsI	GAGTC	1 cut(s)	1378
PpuMI	RGGWCCY	1 cut(s)	339
Psp124BI	GAGCTC	1 cut(s)	677
Psp1406I	AACGTT	1 cut(s)	288
Psp5II	RGGWCCY	1 cut(s)	339
Psp6I	CCWGG	3 cut(s)	40, 150, 1307
PspFI	CCCAGC	2 cut(s)	430, 688
PspGI	CCWGG	3 cut(s)	40, 150, 1307
PspN4I	GGNNCC	2 cut(s)	237, 341
PspPPI	RGGWCCY	1 cut(s)	339
PstI	CTGCAG	1 cut(s)	1125
PsuI	RGATCY	2 cut(s)	21, 1604
PvuI	CGATCG	1 cut(s)	1618
PvuII	CAGCTG	3 cut(s)	242, 434, 1094
RgaI	GCGATCGC	1 cut(s)	1618
RsaI	GTAC	4 cut(s)	171, 607, 706, 796
RsaNI	GTAC	4 cut(s)	170, 606, 705, 795
RseI	CAYNNNNRTG	1 cut(s)	1652
SacI	GAGCTC	1 cut(s)	677
SaqAI	TTAA	8 cut(s)	323, 392, 468, 923, 983, 1076, 1194, 1344
SatI	GCNGC	6 cut(s)	550, 738, 1092, 1095, 1509, 1621
Sau3AI	GATC	7 cut(s)	21, 520, 538, 787, 1156, 1604, 1615
ScaI	AGTACT	2 cut(s)	607, 706
SchI	GAGTC	1 cut(s)	1379
ScrFI	CCNGG	4 cut(s)	42, 152, 483, 1309
SduI	GDGCHC	2 cut(s)	677, 919
SfaAI	GCGATCGC	1 cut(s)	1618
SfaNI	GCATC	3 cut(s)	451, 546, 1138
SfcI	CTRYAG	2 cut(s)	48, 1121
SfuI	TTCGAA	1 cut(s)	1277
SgfI	GCGATCGC	1 cut(s)	1618
SgrAI	CRCCGGYG	1 cut(s)	1549
SinI	GGWCC	8 cut(s)	6, 148, 154, 339, 1045, 1384, 1414, 1487
SmiI	ATTTAAAT	1 cut(s)	1077
SmiMI	CAYNNNNRTG	1 cut(s)	1652
SmlI	CTYRAG	1 cut(s)	322
SmoI	CTYRAG	1 cut(s)	322
SphI	GCATGC	1 cut(s)	1515
SsiI	CCGC	7 cut(s)	4, 611, 642, 1412, 1508, 1612, 1621
SspMI	CTAG	3 cut(s)	654, 1088, 1284
SstI	GAGCTC	1 cut(s)	677
StyD4I	CCNGG	4 cut(s)	40, 150, 481, 1307
StyI	CCWWGG	1 cut(s)	560
SwaI	ATTTAAAT	1 cut(s)	1077
TaaI	ACNGT	1 cut(s)	1564
TaiI	ACGT	2 cut(s)	165, 291
TaqI	TCGA	4 cut(s)	457, 618, 832, 1277
TaqII	GACCGA	1 cut(s)	263
TatI	WGTACW	3 cut(s)	605, 704, 794
TauI	GCSGC	2 cut(s)	1511, 1623
TfiI	GAWTC	3 cut(s)	637, 1321, 1567
Tru1I	TTAA	8 cut(s)	323, 392, 468, 923, 983, 1076, 1194, 1344
Tru9I	TTAA	8 cut(s)	323, 392, 468, 923, 983, 1076, 1194, 1344
TscAI	CASTG	2 cut(s)	630, 687
TseFI	GTSAC	2 cut(s)	244, 1313
TseI	GCWGC	4 cut(s)	549, 737, 1091, 1094
Tsp45I	GTSAC	2 cut(s)	244, 1313
TspDTI	ATGAA	5 cut(s)	83, 612, 827, 968, 1575
TspGWI	ACGGA	1 cut(s)	1579
TspRI	CASTG	2 cut(s)	630, 687
Vha464I	CTTAAG	1 cut(s)	322
VpaK11BI	GGWCC	8 cut(s)	6, 148, 154, 339, 1045, 1384, 1414, 1487
XapI	RAATTY	7 cut(s)	631, 759, 961, 978, 1249, 1279, 1492
XbaI	TCTAGA	1 cut(s)	1283
XceI	RCATGY	1 cut(s)	1515
XcmI	CCANNNNNNNNNTGG	2 cut(s)	33, 438
XmnI	GAANNNNTTC	1 cut(s)	384
XspI	CTAG	3 cut(s)	654, 1088, 1284
ZrmI	AGTACT	2 cut(s)	607, 706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.