Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0005478

Physical Location & Seq

Genomic Coordinates Reverse (-)

12620743 .. 12624996

Gene Structure 4254 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G012880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1596 bp

ATGCGGACCAACAGAGGAAAGATCCCAAAGAACTCGTGGCCTGGAGCAGTAGTGAGGAAATGGCTCAACATTCCAACCGGAGGGGACGAGTTTCATTCGGATTACTCTGTAAAAAATGTAACTGAGAGTAGGAGGAAGAGTTGCTCGGACCAGGACCACTACGTCGTCGTACCGGACGATGTTGCAGATGGTTGGTTGATGGAGGACGCTTACGGCCCAAGTTTTGCGCCGGAGGCACCAGCTGTGACCGACCATCTCAACGTCAGAATGTTCGTGGGGACATGGAACGTTGGAGGCAAATCACCACAAGAGGACTTGAACTTAAGGGAATGGCTTAGGTCCCCAACTCCTGCCGATATCTATGTTCTTGGGTTTCAGGAAATTGTTCCTTTAAACGCCGGTAATGTATTGGGTGCGGAGGACAAAGGCCCAGCTGACAAGTGGCTTTCCCTTATTCGAGATGCACTTAACAAGAATGACCCCGGACTTCCTAATAATTACAACAATGCCACCCATAATGATCAGCAAGCACATCTTGATCAGCAAGGCAGCATGATGCCAAGGCTCAGCTTCTCGGACTTGCTTTCCTTAGAAGATGAACTCAGTACTGCGGACTTCGAGACACTGCTGAATTTGAATCCCGCGTCAACTTCTAGTGGAGAAAGCTCACCGAGCTCCCCACTGGGTCTGGGTATGCAGGAGAGTACTTCAATGCAACGACATCGTTATTGCTTAGCAGCGAGCAAGCAGATGGTGGGAATTTTCTTGTGTGTGTGGGTTCGTGCTGATCTTTGTACACACATTAGCAACATGAAGGTCTCATGTGTTGGTCGAGGCATAATGGGATATCTTGGAAATAAGGGTTCAATATCAATAAGCATGACATTGCATAAAACAACCTTTTGCTTTGTCTGTGCTCACTTAACTTCTGGTGAGAAAGAAGGGGATGAGATGAAAAGGAATTCAGATGTCATCGAAATTTTAAAGAAAACAAAGTTTTCTAACTCATGTAGAACACGACCACTTCCTCCTGATAGCATATTGGACCATGACAAGATTATTTGGCTTGGGGATTTAAATTACCGGCTAGCAGCTGCTTGCGCTGACACACATGAGCTTCTGCAGAAGCAACATTGGCAAGCACTTTTAGAGAAAGATCAGCTAAGAATAGAGCAACAAGCTGGTAGAGTATTTAAAGGGTGGGAAGAAGGGAGGATATATTTTGCTCCGACTTACAAATACCTTGCAAATTCTAATCATTATGTTGCCCAAACTTCGAATTCTAGAGAGAAGAGACGCACTCCTGCCTGGTGTGACAGGATTCTATGGAAAGGAGAAGGACTTAAACAAATGTGGTATTTGAGAGGGGAGTCAAAGTTCTCGGACCACAGACCGGTCTATTCTTTGTTTGCGGTACAAATAAACTTGGCCAGCAAGAAAAAACCCAAACCTGCTGTTCCCATAAGCACAACAAGCAACAGAGTTGGTCCAAATTCTCGGTTGCCAGCGACATGCGTGGCCAAAGTGCAAGCCGAGGAGCTTTTGGTACTCACAAGAGCAAAAAGCTGCTTAGACACAAGCTCCTCCAGGTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004439 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0030258 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0042578 GO:0044237 GO:0044238 GO:0044255 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0052866 GO:0071704 GO:0106019

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Exo_endo_phos

Protein Analysis

531

Amino Acids

59.44

Weight (kDa)

8.47

Isoelectric Point (pI)

46.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos2	PF22669	93 - 167	1.9e-08	Endonuclease/Exonuclease/phosphatase family 2
Exo_endo_phos2	PF22669	238 - 468	7.7e-63	Endonuclease/Exonuclease/phosphatase family 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005478)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37440 AT2G37440 AT2G37440
fragaria_vesca	FvH4_6g14390 FvH4_6g14390 FvH4_6g14390 FvH4_6g14390 FvH4_6g14390 FvH4_6g14390
malus_domestica	MD04G1120100.v1.1 MD12G1137500.v1.1
prunus_persica	Prupe.6G249400_v2.0.a1 Prupe.6G249400_v2.0.a1 Prupe.6G249400_v2.0.a1 Prupe.6G249400_v2.0.a1
pyrus_communis	pycom04g10930 pycom12g13150
rosa_chinensis	RchiOBHm_Chr3g0467461
rosa_laevigata	RLG00000024503
rosa_multiflora	Rmu_sc0001601.1_g000003
rosa_roxburghii	Rroxscaffold_6G00413660
rosa_rugosa	Rorug03G0087200 Rorug03G0087300 Rorug03G0087400
rosa_samantha	Rh3AG135600 Rh3BG157200 Rh3CG157100 Rh3DG158000
rosa_wichuraiana	Rw3G012880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	161
Acc36I	ACCTGC	1 cut(s)	1459
AccB1I	GGYRCC	1 cut(s)	235
AccII	CGCG	1 cut(s)	644
AciI	CCGC	5 cut(s)	4, 416, 611, 642, 1412
AclI	AACGTT	1 cut(s)	288
AclWI	GGATC	1 cut(s)	16
AcoI	YGGCCR	2 cut(s)	1428, 1518
AcsI	RAATTY	7 cut(s)	631, 759, 961, 978, 1249, 1279, 1492
AfaI	GTAC	6 cut(s)	171, 607, 706, 796, 1416, 1548
AfiI	CCNNNNNNNGG	2 cut(s)	80, 1393
AflII	CTTAAG	1 cut(s)	322
AgeI	ACCGGT	1 cut(s)	1393
AgsI	TTSAA	4 cut(s)	319, 637, 711, 867
AjnI	CCWGG	4 cut(s)	40, 150, 1307, 1586
AloI	GAACNNNNNNTCC	2 cut(s)	1361, 1393
Alw21I	GWGCWC	2 cut(s)	677, 919
Alw26I	GTCTC	3 cut(s)	614, 823, 1288
AlwI	GGATC	1 cut(s)	16
AlwNI	CAGNNNCTG	1 cut(s)	1593
AoxI	GGCC	5 cut(s)	38, 214, 427, 1428, 1518
ApeKI	GCWGC	5 cut(s)	549, 737, 1091, 1094, 1566
ApoI	RAATTY	7 cut(s)	631, 759, 961, 978, 1249, 1279, 1492
AsiGI	ACCGGT	1 cut(s)	1393
Asp700I	GAANNNNTTC	1 cut(s)	384
AspLEI	GCGC	2 cut(s)	229, 1103
AspS9I	GGNCC	9 cut(s)	6, 148, 154, 215, 339, 428, 1045, 1384, 1487
AsuC2I	CCSGG	1 cut(s)	483
AsuHPI	GGTGA	3 cut(s)	294, 660, 944
AsuII	TTCGAA	1 cut(s)	1277
AsuNHI	GCTAGC	1 cut(s)	1087
AvaII	GGWCC	7 cut(s)	6, 148, 154, 339, 1045, 1384, 1487
BalI	TGGCCA	2 cut(s)	1430, 1520
BanI	GGYRCC	1 cut(s)	235
BanII	GRGCYC	1 cut(s)	677
BauI	CACGAG	1 cut(s)	34
Bbv12I	GWGCWC	2 cut(s)	677, 919
BbvI	GCAGC	5 cut(s)	561, 749, 1081, 1103, 1553
BccI	CCATC	4 cut(s)	182, 193, 261, 745
BceAI	ACGGC	1 cut(s)	229
BcgI	CGANNNNNNTGC	2 cut(s)	704, 738
BciT130I	CCWGG	4 cut(s)	42, 152, 1309, 1588
BclI	TGATCA	2 cut(s)	520, 538
BcnI	CCSGG	1 cut(s)	483
BcoDI	GTCTC	3 cut(s)	614, 823, 1288
BfaI	CTAG	3 cut(s)	654, 1088, 1284
BfmI	CTRYAG	1 cut(s)	1121
BfrI	CTTAAG	1 cut(s)	322
BfuAI	ACCTGC	1 cut(s)	1459
BisI	GCNGC	5 cut(s)	550, 738, 1092, 1095, 1567
BlpI	GCTNAGC	2 cut(s)	566, 733
BlsI	GCNGC	5 cut(s)	551, 739, 1093, 1096, 1568
BmcAI	AGTACT	2 cut(s)	607, 706
Bme1390I	CCNGG	5 cut(s)	42, 152, 483, 1309, 1588
Bme18I	GGWCC	7 cut(s)	6, 148, 154, 339, 1045, 1384, 1487
BmgT120I	GGNCC	9 cut(s)	6, 148, 154, 215, 339, 428, 1045, 1384, 1487
BmiI	GGNNCC	2 cut(s)	237, 341
BmrFI	CCNGG	5 cut(s)	42, 152, 483, 1309, 1588
BmrI	ACTGGG	1 cut(s)	692
BmsI	GCATC	2 cut(s)	451, 546
BmtI	GCTAGC	1 cut(s)	1091
BmuI	ACTGGG	1 cut(s)	692
BplI	GAGNNNNNCTC	2 cut(s)	1285, 1317
BpmI	CTGGAG	2 cut(s)	63, 1570
Bpu10I	CCTNAGC	1 cut(s)	335
Bpu1102I	GCTNAGC	2 cut(s)	566, 733
Bpu14I	TTCGAA	1 cut(s)	1277
BpuMI	CCSGG	1 cut(s)	483
BsaI	GGTCTC	1 cut(s)	823
BsaJI	CCNNGG	3 cut(s)	481, 560, 1533
BsaWI	WCCGGW	3 cut(s)	77, 172, 1393
BsaXI	ACNNNNNCTCC	8 cut(s)	36, 66, 124, 154, 1361, 1391, 1565, 1595
Bsc4I	CCNNNNNNNGG	2 cut(s)	80, 1393
Bse118I	RCCGGY	3 cut(s)	398, 1083, 1393
Bse1I	ACTGG	1 cut(s)	687
Bse3DI	GCAATG	1 cut(s)	884
BseBI	CCWGG	4 cut(s)	42, 152, 1309, 1588
BseDI	CCNNGG	3 cut(s)	481, 560, 1533
BseGI	GGATG	1 cut(s)	952
BseLI	CCNNNNNNNGG	2 cut(s)	80, 1393
BseMI	GCAATG	1 cut(s)	884
BseMII	CTCAG	3 cut(s)	114, 580, 616
BseNI	ACTGG	1 cut(s)	687
BseRI	GAGGAG	2 cut(s)	1550, 1573
BseXI	GCAGC	5 cut(s)	561, 749, 1081, 1103, 1553
BseYI	CCCAGC	1 cut(s)	430
Bsh1236I	CGCG	1 cut(s)	644
BshFI	GGCC	5 cut(s)	40, 216, 429, 1430, 1520
BshNI	GGYRCC	1 cut(s)	235
BshTI	ACCGGT	1 cut(s)	1393
BsiHKAI	GWGCWC	2 cut(s)	677, 919
BsiSI	CCGG	7 cut(s)	78, 173, 230, 399, 483, 1084, 1394
BslFI	GGGAC	3 cut(s)	98, 292, 325
BslI	CCNNNNNNNGG	2 cut(s)	80, 1393
BsmAI	GTCTC	3 cut(s)	614, 823, 1288
BsmBI	CGTCTC	1 cut(s)	1288
BsmFI	GGGAC	3 cut(s)	98, 292, 325
BsnI	GGCC	5 cut(s)	40, 216, 429, 1430, 1520
Bso31I	GGTCTC	1 cut(s)	823
Bsp119I	TTCGAA	1 cut(s)	1277
Bsp1286I	GDGCHC	2 cut(s)	677, 919
Bsp1407I	TGTACA	1 cut(s)	794
Bsp143I	GATC	5 cut(s)	21, 520, 538, 787, 1156
Bsp1720I	GCTNAGC	2 cut(s)	566, 733
BspACI	CCGC	5 cut(s)	4, 416, 611, 642, 1412
BspANI	GGCC	5 cut(s)	40, 216, 429, 1430, 1520
BspCNI	CTCAG	3 cut(s)	115, 579, 615
BspFNI	CGCG	1 cut(s)	644
BspLI	GGNNCC	2 cut(s)	237, 341
BspMAI	CTGCAG	1 cut(s)	1125
BspMI	ACCTGC	1 cut(s)	1459
BspOI	GCTAGC	1 cut(s)	1091
BspPI	GGATC	1 cut(s)	16
BspT104I	TTCGAA	1 cut(s)	1277
BspT107I	GGYRCC	1 cut(s)	235
BspTI	CTTAAG	1 cut(s)	322
BspTNI	GGTCTC	1 cut(s)	823
BsrDI	GCAATG	1 cut(s)	884
BsrFI	RCCGGY	3 cut(s)	398, 1083, 1393
BsrGI	TGTACA	1 cut(s)	794
BsrI	ACTGG	1 cut(s)	687
BssAI	RCCGGY	3 cut(s)	398, 1083, 1393
BssECI	CCNNGG	3 cut(s)	481, 560, 1533
BssMI	GATC	5 cut(s)	21, 520, 538, 787, 1156
BssSI	CACGAG	1 cut(s)	34
BssT1I	CCWWGG	1 cut(s)	560
Bst2BI	CACGAG	1 cut(s)	34
Bst2UI	CCWGG	4 cut(s)	42, 152, 1309, 1588
Bst6I	CTCTTC	2 cut(s)	131, 1286
BstAFI	CTTAAG	1 cut(s)	322
BstAUI	TGTACA	1 cut(s)	794
BstBI	TTCGAA	1 cut(s)	1277
BstC8I	GCNNGC	9 cut(s)	528, 742, 746, 1089, 1099, 1140, 1432, 1506, 1530
BstDEI	CTNAG	8 cut(s)	123, 335, 566, 589, 602, 733, 1163, 1570
BstF5I	GGATG	1 cut(s)	952
BstFNI	CGCG	1 cut(s)	644
BstHHI	GCGC	2 cut(s)	229, 1103
BstKTI	GATC	5 cut(s)	24, 523, 541, 790, 1159
BstMAI	GTCTC	3 cut(s)	614, 823, 1288
BstMBI	GATC	5 cut(s)	21, 520, 538, 787, 1156
BstMWI	GCNNNNNNNGC	5 cut(s)	233, 672, 1100, 1135, 1473
BstNI	CCWGG	4 cut(s)	42, 152, 1309, 1588
BstNSI	RCATGY	1 cut(s)	1515
BstSCI	CCNGG	5 cut(s)	40, 150, 481, 1307, 1586
BstSFI	CTRYAG	1 cut(s)	1121
BstUI	CGCG	1 cut(s)	644
BstV1I	GCAGC	5 cut(s)	561, 749, 1081, 1103, 1553
BstX2I	RGATCY	1 cut(s)	21
BstYI	RGATCY	1 cut(s)	21
BsuRI	GGCC	5 cut(s)	40, 216, 429, 1430, 1520
BtsCI	GGATG	1 cut(s)	952
BtsI	GCAGTG	1 cut(s)	623
BtsIMutI	CAGTG	2 cut(s)	623, 680
BveI	ACCTGC	1 cut(s)	1459
Cac8I	GCNNGC	9 cut(s)	528, 742, 746, 1089, 1099, 1140, 1432, 1506, 1530
CaiI	CAGNNNCTG	1 cut(s)	1593
CfoI	GCGC	2 cut(s)	229, 1103
Cfr10I	RCCGGY	3 cut(s)	398, 1083, 1393
Cfr13I	GGNCC	9 cut(s)	6, 148, 154, 215, 339, 428, 1045, 1384, 1487
CseI	GACGC	3 cut(s)	215, 633, 1305
Csp6I	GTAC	6 cut(s)	170, 606, 705, 795, 1415, 1547
CspAI	ACCGGT	1 cut(s)	1393
CviAII	CATG	9 cut(s)	282, 553, 811, 822, 880, 1008, 1049, 1112, 1512
CviQI	GTAC	6 cut(s)	170, 606, 705, 795, 1415, 1547
DdeI	CTNAG	8 cut(s)	123, 335, 566, 589, 602, 733, 1163, 1570
DpnI	GATC	5 cut(s)	23, 522, 540, 789, 1158
DpnII	GATC	5 cut(s)	21, 520, 538, 787, 1156
DraI	TTTAAA	4 cut(s)	393, 984, 1077, 1195
DrdI	GACNNNNNNGTC	1 cut(s)	161
DseDI	GACNNNNNNGTC	1 cut(s)	161
EaeI	YGGCCR	2 cut(s)	1428, 1518
Eam1104I	CTCTTC	2 cut(s)	131, 1286
EarI	CTCTTC	2 cut(s)	131, 1286
Ecl136II	GAGCTC	1 cut(s)	675
Eco130I	CCWWGG	1 cut(s)	560
Eco24I	GRGCYC	1 cut(s)	677
Eco31I	GGTCTC	1 cut(s)	823
Eco32I	GATATC	2 cut(s)	358, 848
Eco47I	GGWCC	7 cut(s)	6, 148, 154, 339, 1045, 1384, 1487
Eco53kI	GAGCTC	1 cut(s)	675
EcoICRI	GAGCTC	1 cut(s)	675
EcoO109I	RGGNCCY	1 cut(s)	339
EcoRI	GAATTC	2 cut(s)	961, 1279
EcoRII	CCWGG	4 cut(s)	40, 150, 1307, 1586
EcoRV	GATATC	2 cut(s)	358, 848
EcoT14I	CCWWGG	1 cut(s)	560
EcoT38I	GRGCYC	1 cut(s)	677
ErhI	CCWWGG	1 cut(s)	560
Esp3I	CGTCTC	1 cut(s)	1288
FaeI	CATG	9 cut(s)	285, 556, 814, 825, 883, 1011, 1052, 1115, 1515
FalI	AAGNNNNNCTT	2 cut(s)	519, 551
FaqI	GGGAC	3 cut(s)	98, 292, 325
FatI	CATG	9 cut(s)	281, 552, 810, 821, 879, 1007, 1048, 1111, 1511
FauI	CCCGC	1 cut(s)	649
FbaI	TGATCA	2 cut(s)	520, 538
Fnu4HI	GCNGC	5 cut(s)	550, 738, 1092, 1095, 1567
FokI	GGATG	1 cut(s)	959
FriOI	GRGCYC	1 cut(s)	677
Fsp4HI	GCNGC	5 cut(s)	550, 738, 1092, 1095, 1567
FspBI	CTAG	3 cut(s)	654, 1088, 1284
GlaI	GCGC	2 cut(s)	228, 1102
GluI	GCNGC	5 cut(s)	550, 738, 1092, 1095, 1567
GsaI	CCCAGC	1 cut(s)	434
GsuI	CTGGAG	2 cut(s)	63, 1570
HaeIII	GGCC	5 cut(s)	40, 216, 429, 1430, 1520
HapII	CCGG	7 cut(s)	78, 173, 230, 399, 483, 1084, 1394
HgaI	GACGC	3 cut(s)	215, 633, 1305
HhaI	GCGC	2 cut(s)	229, 1103
Hin1II	CATG	9 cut(s)	285, 556, 814, 825, 883, 1011, 1052, 1115, 1515
Hin6I	GCGC	2 cut(s)	227, 1101
HinP1I	GCGC	2 cut(s)	227, 1101
HincII	GTYRAC	1 cut(s)	648
HindII	GTYRAC	1 cut(s)	648
HinfI	GANTC	3 cut(s)	637, 1321, 1370
HpaII	CCGG	7 cut(s)	78, 173, 230, 399, 483, 1084, 1394
HphI	GGTGA	3 cut(s)	294, 660, 944
Hpy166II	GTNNAC	2 cut(s)	648, 797
Hpy188I	TCNGA	8 cut(s)	100, 148, 266, 577, 967, 1230, 1384, 1595
Hpy188III	TCNNGA	6 cut(s)	377, 458, 536, 619, 1031, 1284
Hpy8I	GTNNAC	2 cut(s)	648, 797
Hpy99I	CGWCG	2 cut(s)	167, 170
HpyAV	CCTTC	4 cut(s)	808, 935, 1202, 1331
HpyCH4IV	ACGT	3 cut(s)	162, 261, 288
HpyCH4V	TGCA	8 cut(s)	185, 464, 697, 715, 889, 1123, 1247, 1528
HpyF10VI	GCNNNNNNNGC	5 cut(s)	233, 672, 1100, 1135, 1473
HpyF3I	CTNAG	8 cut(s)	123, 335, 566, 589, 602, 733, 1163, 1570
HpySE526I	ACGT	3 cut(s)	162, 261, 288
Hsp92II	CATG	9 cut(s)	285, 556, 814, 825, 883, 1011, 1052, 1115, 1515
HspAI	GCGC	2 cut(s)	227, 1101
Ksp22I	TGATCA	2 cut(s)	520, 538
Kzo9I	GATC	5 cut(s)	21, 520, 538, 787, 1156
LmnI	GCTCC	5 cut(s)	44, 680, 1231, 1537, 1586
Lsp1109I	GCAGC	5 cut(s)	561, 749, 1081, 1103, 1553
LweI	GCATC	2 cut(s)	451, 546
MaeI	CTAG	3 cut(s)	654, 1088, 1284
MaeII	ACGT	3 cut(s)	162, 261, 288
MaeIII	GTNAC	3 cut(s)	118, 244, 1313
MalI	GATC	5 cut(s)	23, 522, 540, 789, 1158
MboI	GATC	5 cut(s)	21, 520, 538, 787, 1156
MboII	GAAGA	4 cut(s)	148, 605, 1217, 1303
MflI	RGATCY	1 cut(s)	21
MhlI	GDGCHC	2 cut(s)	677, 919
MlsI	TGGCCA	2 cut(s)	1430, 1520
MluNI	TGGCCA	2 cut(s)	1430, 1520
MlyI	GAGTC	1 cut(s)	1379
MmeI	TCCRAC	3 cut(s)	98, 271, 1253
Mox20I	TGGCCA	2 cut(s)	1430, 1520
MroXI	GAANNNNTTC	1 cut(s)	384
MscI	TGGCCA	2 cut(s)	1430, 1520
MseI	TTAA	8 cut(s)	323, 392, 468, 923, 983, 1076, 1194, 1344
Msp20I	TGGCCA	2 cut(s)	1430, 1520
MspA1I	CMGCKG	3 cut(s)	242, 434, 1094
MspCI	CTTAAG	1 cut(s)	322
MspI	CCGG	7 cut(s)	78, 173, 230, 399, 483, 1084, 1394
MspR9I	CCNGG	5 cut(s)	42, 152, 483, 1309, 1588
MvaI	CCWGG	4 cut(s)	42, 152, 1309, 1588
MvnI	CGCG	1 cut(s)	644
MwoI	GCNNNNNNNGC	5 cut(s)	233, 672, 1100, 1135, 1473
NciI	CCSGG	1 cut(s)	483
NdeII	GATC	5 cut(s)	21, 520, 538, 787, 1156
NheI	GCTAGC	1 cut(s)	1087
NlaIII	CATG	9 cut(s)	285, 556, 814, 825, 883, 1011, 1052, 1115, 1515
NlaIV	GGNNCC	2 cut(s)	237, 341
NmeAIII	GCCGAG	1 cut(s)	1558
NmuCI	GTSAC	2 cut(s)	244, 1313
NspI	RCATGY	1 cut(s)	1515
NspV	TTCGAA	1 cut(s)	1277
PcsI	WCGNNNNNNNCGW	1 cut(s)	174
PdmI	GAANNNNTTC	1 cut(s)	384
PfeI	GAWTC	2 cut(s)	637, 1321
PinAI	ACCGGT	1 cut(s)	1393
PkrI	GCNGC	5 cut(s)	551, 739, 1093, 1096, 1568
PleI	GAGTC	1 cut(s)	1378
PpsI	GAGTC	1 cut(s)	1378
PpuMI	RGGWCCY	1 cut(s)	339
Psp124BI	GAGCTC	1 cut(s)	677
Psp1406I	AACGTT	1 cut(s)	288
Psp5II	RGGWCCY	1 cut(s)	339
Psp6I	CCWGG	4 cut(s)	40, 150, 1307, 1586
PspFI	CCCAGC	1 cut(s)	430
PspGI	CCWGG	4 cut(s)	40, 150, 1307, 1586
PspN4I	GGNNCC	2 cut(s)	237, 341
PspPI	GGNCC	9 cut(s)	6, 148, 154, 215, 339, 428, 1045, 1384, 1487
PspPPI	RGGWCCY	1 cut(s)	339
PstI	CTGCAG	1 cut(s)	1125
PstNI	CAGNNNCTG	1 cut(s)	1593
PsuI	RGATCY	1 cut(s)	21
PvuII	CAGCTG	3 cut(s)	242, 434, 1094
RsaI	GTAC	6 cut(s)	171, 607, 706, 796, 1416, 1548
RsaNI	GTAC	6 cut(s)	170, 606, 705, 795, 1415, 1547
SacI	GAGCTC	1 cut(s)	677
SaqAI	TTAA	8 cut(s)	323, 392, 468, 923, 983, 1076, 1194, 1344
SatI	GCNGC	5 cut(s)	550, 738, 1092, 1095, 1567
Sau3AI	GATC	5 cut(s)	21, 520, 538, 787, 1156
Sau96I	GGNCC	9 cut(s)	6, 148, 154, 215, 339, 428, 1045, 1384, 1487
ScaI	AGTACT	2 cut(s)	607, 706
SchI	GAGTC	1 cut(s)	1379
ScrFI	CCNGG	5 cut(s)	42, 152, 483, 1309, 1588
SduI	GDGCHC	2 cut(s)	677, 919
SfaNI	GCATC	2 cut(s)	451, 546
SfcI	CTRYAG	1 cut(s)	1121
SfuI	TTCGAA	1 cut(s)	1277
SinI	GGWCC	7 cut(s)	6, 148, 154, 339, 1045, 1384, 1487
SmiI	ATTTAAAT	1 cut(s)	1077
SmlI	CTYRAG	1 cut(s)	322
SmoI	CTYRAG	1 cut(s)	322
SsiI	CCGC	5 cut(s)	4, 416, 611, 642, 1412
SspMI	CTAG	3 cut(s)	654, 1088, 1284
SstI	GAGCTC	1 cut(s)	677
StyD4I	CCNGG	5 cut(s)	40, 150, 481, 1307, 1586
StyI	CCWWGG	1 cut(s)	560
SwaI	ATTTAAAT	1 cut(s)	1077
TaiI	ACGT	3 cut(s)	165, 264, 291
TaqI	TCGA	5 cut(s)	457, 618, 832, 975, 1277
TaqII	GACCGA	1 cut(s)	263
TatI	WGTACW	3 cut(s)	605, 704, 794
TfiI	GAWTC	2 cut(s)	637, 1321
Tru1I	TTAA	8 cut(s)	323, 392, 468, 923, 983, 1076, 1194, 1344
Tru9I	TTAA	8 cut(s)	323, 392, 468, 923, 983, 1076, 1194, 1344
TscAI	CASTG	2 cut(s)	630, 687
TseFI	GTSAC	2 cut(s)	244, 1313
TseI	GCWGC	5 cut(s)	549, 737, 1091, 1094, 1566
Tsp45I	GTSAC	2 cut(s)	244, 1313
TspDTI	ATGAA	4 cut(s)	83, 612, 827, 968
TspRI	CASTG	2 cut(s)	630, 687
Vha464I	CTTAAG	1 cut(s)	322
VpaK11BI	GGWCC	7 cut(s)	6, 148, 154, 339, 1045, 1384, 1487
XapI	RAATTY	7 cut(s)	631, 759, 961, 978, 1249, 1279, 1492
XbaI	TCTAGA	1 cut(s)	1283
XceI	RCATGY	1 cut(s)	1515
XcmI	CCANNNNNNNNNTGG	2 cut(s)	33, 438
XmnI	GAANNNNTTC	1 cut(s)	384
XspI	CTAG	3 cut(s)	654, 1088, 1284
ZrmI	AGTACT	2 cut(s)	607, 706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.