Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0010439

Physical Location & Seq

Genomic Coordinates Reverse (-)

49360080 .. 49362576

Gene Structure 2497 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00428980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGTTCGATGGAGTCCCAGCTGAGCAATTGCACCAATTCATAGCAGCCTCAAGAACTTCACTCCCTCTCCCTCTTCCCAATATTCCTCTCTCTTCCTTCCCTAATCTCCAACCCTTCGATAATCATCATCATCATCATAACTACAACATCATCAACCCTCCTCCCCCAACACCTCAAGAACTTGTGCAGCTTCAGCCACCACCTCACAATCAGCTTCTGCTTCCGTCCGTAGTACTTCACCGCCGCGCAAATGATCAAGAGAAGCAAGAAAACAGCACTACCTTGGTCTTGCCCTCATCGAATTTGGAGATCGAACGAGAACGAACCGCATCGATGCCACCTGAATTGCCTAGCGATCCCTGGAGTAACGATGAGCTGCTTGCACTGCTCCGGATCAGATCTACCATGGAGAATTGGTTCCCTGAGTTCACTTGGGAACATGTCTCAAGAAAGCTTGCAGAGGTTGGCTTTAAAAGGAGTGCAGAGAAGTGCAAGGAGAAGTTTGAAGAGGAAAGCAGGTACTTCAACAACATCAACTTCAACAAGAACTTCAGGTTTCTTAGTGAGCTTGAGCAGCTCTATCAACCACCAGTTGAGCCACCTCAAAACGTAGCTGAAGATCAACCAGAAAAGAATACCGAAAAAGTAGTAGAAGTTAAAAAGCCATGTGAAGAACTAGGAAACCAAGATAAAGGCCAAACAGCTTTGGATCCTCAAGAGTCACCAAGCAATGATCAAACAGTTAGTGAGACACAGGTAGAGATTGTTAGAGCAAAGAGCAACAACAAGAAGAGGAAGAGGCAGAGGAGATTTGAAATGCTAAAAGGTTTCTGTGAAGACATAGTGAACAAGTTGATGGCTCAGCAAGAAGAGACTCACAGTAAGCTACTTGAAGACATGGTGAGGAGAGATGAAGAGAAGCTTGCAAAAGAAGAAGCTTGGAAGAAGCAAGAGATGGATAGGATGAACAAGGAGCTTGAAACCATGGCACATGAACAAGCTGTTGCAGGTGATAGACAAGCTACAATTATTCAGTTCTTGAAGAAATTCACATCATCAGCTAGTACTAGTAGTAGTACTAACCCTAGTAATGGCCAAAAGGAAAATGATCAAGAACCAATTACATCATCCACAATGGTCCCATCTGCAAGCAATGTTCACAAGTCTACTACTACTACTACTTCTTTCCACACCCAAAATAATCCAAGCACACCCACTTCACTGACCGAAGCCATTGCACCCCAAAGCCCTAGTTCAAGCACTCTAAGCATCAATCCAAAACTGCCCATTTCATCTCCGCCTCCTGAAAACCCTAGCTCGAACGACAAAGCGCAAGACCTTGGAAAGAGGTGGCCGAGGGACGAAGTCTTGGCTCTGATTAACCTCCGGTGCAGTCTCTTCAACAATGGCGATCAACAAGACAAGGATAAAGATGGAGGAGCCGTCAAGGCTCCACTGTGGGAGAGAATCTCACAAGGGATGTCGGAGTTGGGTTACAAGAGAAACGCCAAGAGGTGTAAAGAGAAATGGGAGAATATCAATAAGTACTTTAGGAAAACAAAGGATGTGAACAAGAAGAGGTCGCTTGACTCGAGGACTTGCCCTTATTTTCATCAACTAAGCACTTTGTACAACCAAGGCATACTCGTACCGCCTTCCGATCATCAAGCGGCGGCGCCGGAAAACCGCTCACCGGAGAACCCATCATCTCTAGCTGAAGGTGAGAAAAACAATATGGTACAGCAAGCTGTACCGGCAGCTTTTGATTTTGAATTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0001067 GO:0001158 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0035326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_4

Protein Analysis

592

Amino Acids

67.4

Weight (kDa)

6.01

Isoelectric Point (pI)

67.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_4	PF13837	119 - 181	3.3e-11	Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4	PF13837	449 - 542	8.3e-21	Myb/SANT-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010439)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G28300
fragaria_vesca	FvH4_6g03310 FvH4_6g03310 FvH4_6g03310
malus_domestica	MD04G1221900.v1.1 MD12G1238000.v1.1
prunus_persica	Prupe.6G341000_v2.0.a1
pyrus_communis	pycom04g19640 pycom12g21880
rosa_chinensis	RchiOBHm_Chr3g0451801
rosa_laevigata	RLG00000025648
rosa_multiflora	Rmu_sc0006510.1_g000017
rosa_roxburghii	Rroxscaffold_164G00436310 Rroxscaffold_6G00428980
rosa_rugosa	Rorug02G0636300 Rorug02G0636400
rosa_samantha	Rh3AG037900 Rh3BG039000 Rh3CG037500 Rh3DG038300
rosa_wichuraiana	Rw3G002820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	998
Acc36I	ACCTGC	2 cut(s)	507, 998
AccB1I	GGYRCC	1 cut(s)	1675
AccBSI	CCGCTC	1 cut(s)	1689
AccI	GTMKAC	1 cut(s)	1166
AccII	CGCG	1 cut(s)	246
AccIII	TCCGGA	1 cut(s)	390
AciI	CCGC	8 cut(s)	241, 244, 327, 1298, 1652, 1670, 1673, 1687
AclWI	GGATC	4 cut(s)	350, 401, 704, 717
AcoI	YGGCCR	2 cut(s)	1093, 1352
AcsI	RAATTY	3 cut(s)	301, 1046, 1772
AcuI	CTGAAG	4 cut(s)	176, 535, 636, 1737
AcyI	GRCGYC	1 cut(s)	1676
AfaI	GTAC	9 cut(s)	234, 521, 1066, 1078, 1547, 1631, 1650, 1740, 1752
AfiI	CCNNNNNNNGG	2 cut(s)	1091, 1693
AflIII	ACRYGT	1 cut(s)	439
AhlI	ACTAGT	1 cut(s)	1067
AjnI	CCWGG	1 cut(s)	359
AloI	GAACNNNNNNTCC	2 cut(s)	401, 433
Alw26I	GTCTC	4 cut(s)	448, 743, 866, 1400
AlwI	GGATC	4 cut(s)	350, 401, 704, 717
AlwNI	CAGNNNCTG	1 cut(s)	217
Ama87I	CYCGRG	1 cut(s)	1591
Aor13HI	TCCGGA	1 cut(s)	390
AoxI	GGCC	3 cut(s)	694, 1093, 1352
ApeKI	GCWGC	5 cut(s)	44, 187, 376, 574, 1757
ApoI	RAATTY	3 cut(s)	301, 1046, 1772
Asp700I	GAANNNNTTC	2 cut(s)	416, 1046
AspLEI	GCGC	3 cut(s)	248, 1333, 1678
AspS9I	GGNCC	1 cut(s)	1138
AsuHPI	GGTGA	6 cut(s)	230, 714, 913, 1022, 1683, 1733
AvaI	CYCGRG	1 cut(s)	1591
AvaII	GGWCC	1 cut(s)	1138
BalI	TGGCCA	1 cut(s)	1095
BamHI	GGATCC	1 cut(s)	709
BanI	GGYRCC	1 cut(s)	1675
BbsI	GAAGAC	2 cut(s)	843, 900
BbvI	GCAGC	5 cut(s)	56, 199, 363, 586, 1769
BccI	CCATC	6 cut(s)	2, 850, 949, 1150, 1427, 1711
BceAI	ACGGC	1 cut(s)	1427
BcgI	CGANNNNNNTGC	2 cut(s)	1217, 1251
BciT130I	CCWGG	1 cut(s)	361
BclI	TGATCA	3 cut(s)	253, 733, 1108
BcoDI	GTCTC	4 cut(s)	448, 743, 866, 1400
BcuI	ACTAGT	1 cut(s)	1067
BfaI	CTAG	8 cut(s)	351, 677, 1062, 1068, 1086, 1251, 1314, 1712
BfoI	RGCGCY	1 cut(s)	1679
BfuAI	ACCTGC	2 cut(s)	507, 998
BglI	GCCNNNNNGGC	1 cut(s)	1448
BglII	AGATCT	1 cut(s)	398
BisI	GCNGC	8 cut(s)	45, 188, 244, 377, 575, 1671, 1674, 1758
BlpI	GCTNAGC	2 cut(s)	21, 861
BlsI	GCNGC	8 cut(s)	46, 189, 245, 378, 576, 1672, 1675, 1759
BmcAI	AGTACT	4 cut(s)	234, 1066, 1078, 1547
Bme1390I	CCNGG	1 cut(s)	361
Bme18I	GGWCC	1 cut(s)	1138
BmeT110I	CYCGRG	1 cut(s)	1591
BmgT120I	GGNCC	1 cut(s)	1138
BmiI	GGNNCC	6 cut(s)	419, 711, 1140, 1441, 1452, 1677
BmrFI	CCNGG	1 cut(s)	361
BmsI	GCATC	3 cut(s)	324, 338, 1278
BpiI	GAAGAC	2 cut(s)	843, 900
BplI	GAGNNNNNCTC	2 cut(s)	1454, 1486
BpmI	CTGGAG	1 cut(s)	382
Bpu1102I	GCTNAGC	2 cut(s)	21, 861
BpuEI	CTTGAG	5 cut(s)	34, 159, 430, 590, 699
Bsa29I	ATCGAT	1 cut(s)	332
BsaBI	GATNNNNATC	1 cut(s)	123
BsaHI	GRCGYC	1 cut(s)	1676
BsaJI	CCNNGG	7 cut(s)	282, 359, 405, 984, 1339, 1355, 1636
BsaWI	WCCGGW	3 cut(s)	390, 1386, 1693
BsaXI	ACNNNNNCTCC	6 cut(s)	51, 81, 401, 431, 1428, 1458
Bsc4I	CCNNNNNNNGG	2 cut(s)	1091, 1693
Bse118I	RCCGGY	1 cut(s)	1753
Bse1I	ACTGG	1 cut(s)	590
Bse3DI	GCAATG	3 cut(s)	736, 1159, 1233
Bse8I	GATNNNNATC	1 cut(s)	123
BseAI	TCCGGA	1 cut(s)	390
BseBI	CCWGG	1 cut(s)	361
BseCI	ATCGAT	1 cut(s)	332
BseDI	CCNNGG	7 cut(s)	282, 359, 405, 984, 1339, 1355, 1636
BseGI	GGATG	4 cut(s)	969, 1127, 1485, 1570
BseJI	GATNNNNATC	1 cut(s)	123
BseLI	CCNNNNNNNGG	2 cut(s)	1091, 1693
BseMI	GCAATG	3 cut(s)	736, 1159, 1233
BseMII	CTCAG	3 cut(s)	12, 414, 875
BseNI	ACTGG	1 cut(s)	590
BseRI	GAGGAG	4 cut(s)	150, 820, 919, 1452
BseXI	GCAGC	5 cut(s)	56, 199, 363, 586, 1769
BseYI	CCCAGC	1 cut(s)	16
BsgI	GTGCAG	3 cut(s)	206, 501, 1411
Bsh1236I	CGCG	1 cut(s)	246
BshFI	GGCC	3 cut(s)	696, 1095, 1354
BshNI	GGYRCC	1 cut(s)	1675
BshVI	ATCGAT	1 cut(s)	332
BsiHKCI	CYCGRG	1 cut(s)	1591
BsiSI	CCGG	5 cut(s)	391, 1387, 1679, 1694, 1754
BslFI	GGGAC	2 cut(s)	1124, 1373
BslI	CCNNNNNNNGG	2 cut(s)	1091, 1693
BsmAI	GTCTC	4 cut(s)	448, 743, 866, 1400
BsmFI	GGGAC	2 cut(s)	1124, 1373
BsnI	GGCC	3 cut(s)	696, 1095, 1354
BsoBI	CYCGRG	1 cut(s)	1591
Bsp13I	TCCGGA	1 cut(s)	390
Bsp1407I	TGTACA	1 cut(s)	1629
Bsp1720I	GCTNAGC	2 cut(s)	21, 861
Bsp19I	CCATGG	2 cut(s)	405, 984
BspACI	CCGC	8 cut(s)	241, 244, 327, 1298, 1652, 1670, 1673, 1687
BspANI	GGCC	3 cut(s)	696, 1095, 1354
BspCNI	CTCAG	3 cut(s)	13, 415, 874
BspDI	ATCGAT	1 cut(s)	332
BspEI	TCCGGA	1 cut(s)	390
BspFNI	CGCG	1 cut(s)	246
BspLI	GGNNCC	6 cut(s)	419, 711, 1140, 1441, 1452, 1677
BspMI	ACCTGC	2 cut(s)	507, 998
BspPI	GGATC	4 cut(s)	350, 401, 704, 717
BspT107I	GGYRCC	1 cut(s)	1675
BsrBI	CCGCTC	1 cut(s)	1689
BsrDI	GCAATG	3 cut(s)	736, 1159, 1233
BsrFI	RCCGGY	1 cut(s)	1753
BsrGI	TGTACA	1 cut(s)	1629
BsrI	ACTGG	1 cut(s)	590
BssAI	RCCGGY	1 cut(s)	1753
BssECI	CCNNGG	7 cut(s)	282, 359, 405, 984, 1339, 1355, 1636
BssNI	GRCGYC	1 cut(s)	1676
BssT1I	CCWWGG	5 cut(s)	282, 405, 984, 1339, 1636
Bst2UI	CCWGG	1 cut(s)	361
Bst4CI	ACNGT	3 cut(s)	742, 881, 1458
Bst6I	CTCTTC	9 cut(s)	78, 97, 501, 785, 791, 864, 909, 1403, 1571
BstACI	GRCGYC	1 cut(s)	1676
BstAUI	TGTACA	1 cut(s)	1629
BstC8I	GCNNGC	5 cut(s)	381, 456, 924, 1150, 1746
BstDEI	CTNAG	6 cut(s)	21, 423, 560, 861, 1265, 1619
BstDSI	CCRYGG	2 cut(s)	405, 984
BstF5I	GGATG	4 cut(s)	969, 1127, 1485, 1570
BstFNI	CGCG	1 cut(s)	246
BstH2I	RGCGCY	1 cut(s)	1679
BstHHI	GCGC	3 cut(s)	248, 1333, 1678
BstMAI	GTCTC	4 cut(s)	448, 743, 866, 1400
BstMWI	GCNNNNNNNGC	6 cut(s)	193, 385, 574, 1266, 1448, 1754
BstNI	CCWGG	1 cut(s)	361
BstNSI	RCATGY	1 cut(s)	443
BstSCI	CCNGG	1 cut(s)	359
BstUI	CGCG	1 cut(s)	246
BstV1I	GCAGC	5 cut(s)	56, 199, 363, 586, 1769
BstV2I	GAAGAC	2 cut(s)	843, 900
BstX2I	RGATCY	2 cut(s)	398, 709
BstYI	RGATCY	2 cut(s)	398, 709
Bsu15I	ATCGAT	1 cut(s)	332
BsuRI	GGCC	3 cut(s)	696, 1095, 1354
BsuTUI	ATCGAT	1 cut(s)	332
BtgI	CCRYGG	2 cut(s)	405, 984
BtsCI	GGATG	4 cut(s)	969, 1127, 1485, 1570
BtsI	GCAGTG	1 cut(s)	383
BtsIMutI	CAGTG	3 cut(s)	383, 1220, 1454
BveI	ACCTGC	2 cut(s)	507, 998
Cac8I	GCNNGC	5 cut(s)	381, 456, 924, 1150, 1746
CaiI	CAGNNNCTG	1 cut(s)	217
CfoI	GCGC	3 cut(s)	248, 1333, 1678
Cfr10I	RCCGGY	1 cut(s)	1753
Cfr13I	GGNCC	1 cut(s)	1138
ClaI	ATCGAT	1 cut(s)	332
Csp6I	GTAC	9 cut(s)	233, 520, 1065, 1077, 1546, 1630, 1649, 1739, 1751
CspCI	CAANNNNNGTGG	2 cut(s)	327, 362
CviAII	CATG	6 cut(s)	406, 440, 666, 898, 985, 992
CviQI	GTAC	9 cut(s)	233, 520, 1065, 1077, 1546, 1630, 1649, 1739, 1751
DdeI	CTNAG	6 cut(s)	21, 423, 560, 861, 1265, 1619
DinI	GGCGCC	1 cut(s)	1677
DraI	TTTAAA	1 cut(s)	472
EaeI	YGGCCR	2 cut(s)	1093, 1352
Eam1104I	CTCTTC	9 cut(s)	78, 97, 501, 785, 791, 864, 909, 1403, 1571
EarI	CTCTTC	9 cut(s)	78, 97, 501, 785, 791, 864, 909, 1403, 1571
EciI	GGCGGA	1 cut(s)	1287
Eco130I	CCWWGG	5 cut(s)	282, 405, 984, 1339, 1636
Eco47I	GGWCC	1 cut(s)	1138
Eco57I	CTGAAG	4 cut(s)	176, 535, 636, 1737
Eco88I	CYCGRG	1 cut(s)	1591
EcoRI	GAATTC	1 cut(s)	1772
EcoRII	CCWGG	1 cut(s)	359
EcoT14I	CCWWGG	5 cut(s)	282, 405, 984, 1339, 1636
EgeI	GGCGCC	1 cut(s)	1677
EheI	GGCGCC	1 cut(s)	1677
ErhI	CCWWGG	5 cut(s)	282, 405, 984, 1339, 1636
FaeI	CATG	6 cut(s)	409, 443, 669, 901, 988, 995
FalI	AAGNNNNNCTT	2 cut(s)	906, 938
FaqI	GGGAC	2 cut(s)	1124, 1373
FatI	CATG	6 cut(s)	405, 439, 665, 897, 984, 991
FbaI	TGATCA	3 cut(s)	253, 733, 1108
FblI	GTMKAC	1 cut(s)	1166
Fnu4HI	GCNGC	8 cut(s)	45, 188, 244, 377, 575, 1671, 1674, 1758
FokI	GGATG	4 cut(s)	976, 1114, 1492, 1577
Fsp4HI	GCNGC	8 cut(s)	45, 188, 244, 377, 575, 1671, 1674, 1758
FspBI	CTAG	8 cut(s)	351, 677, 1062, 1068, 1086, 1251, 1314, 1712
GlaI	GCGC	3 cut(s)	247, 1332, 1677
GluI	GCNGC	8 cut(s)	45, 188, 244, 377, 575, 1671, 1674, 1758
GsaI	CCCAGC	1 cut(s)	20
GsuI	CTGGAG	1 cut(s)	382
HaeII	RGCGCY	1 cut(s)	1679
HaeIII	GGCC	3 cut(s)	696, 1095, 1354
HapII	CCGG	5 cut(s)	391, 1387, 1679, 1694, 1754
HhaI	GCGC	3 cut(s)	248, 1333, 1678
Hin1I	GRCGYC	1 cut(s)	1676
Hin1II	CATG	6 cut(s)	409, 443, 669, 901, 988, 995
Hin6I	GCGC	3 cut(s)	246, 1331, 1676
HinP1I	GCGC	3 cut(s)	246, 1331, 1676
HindIII	AAGCTT	3 cut(s)	452, 920, 936
HinfI	GANTC	5 cut(s)	12, 719, 874, 1467, 1589
HpaII	CCGG	5 cut(s)	391, 1387, 1679, 1694, 1754
HphI	GGTGA	6 cut(s)	230, 714, 913, 1022, 1683, 1733
Hpy166II	GTNNAC	5 cut(s)	429, 847, 1159, 1167, 1570
Hpy188I	TCNGA	5 cut(s)	398, 1377, 1486, 1660, 1778
Hpy188III	TCNNGA	9 cut(s)	51, 176, 257, 391, 447, 716, 1039, 1112, 1304
Hpy8I	GTNNAC	5 cut(s)	429, 847, 1159, 1167, 1570
HpyAV	CCTTC	4 cut(s)	106, 124, 1665, 1712
HpyCH4III	ACNGT	3 cut(s)	742, 881, 1458
HpyCH4IV	ACGT	1 cut(s)	609
HpyF10VI	GCNNNNNNNGC	6 cut(s)	193, 385, 574, 1266, 1448, 1754
HpyF3I	CTNAG	6 cut(s)	21, 423, 560, 861, 1265, 1619
HpySE526I	ACGT	1 cut(s)	609
Hsp92I	GRCGYC	1 cut(s)	1676
Hsp92II	CATG	6 cut(s)	409, 443, 669, 901, 988, 995
HspAI	GCGC	3 cut(s)	246, 1331, 1676
KasI	GGCGCC	1 cut(s)	1675
Kpn2I	TCCGGA	1 cut(s)	390
Ksp22I	TGATCA	3 cut(s)	253, 733, 1108
LmnI	GCTCC	4 cut(s)	393, 973, 1439, 1456
Lsp1109I	GCAGC	5 cut(s)	56, 199, 363, 586, 1769
LweI	GCATC	3 cut(s)	324, 338, 1278
MaeI	CTAG	8 cut(s)	351, 677, 1062, 1068, 1086, 1251, 1314, 1712
MaeII	ACGT	1 cut(s)	609
MaeIII	GTNAC	3 cut(s)	365, 720, 1493
MbiI	CCGCTC	1 cut(s)	1689
MfeI	CAATTG	1 cut(s)	26
MflI	RGATCY	2 cut(s)	398, 709
MlsI	TGGCCA	1 cut(s)	1095
MluCI	AATT	9 cut(s)	26, 35, 301, 344, 412, 1026, 1046, 1119, 1772
MluNI	TGGCCA	1 cut(s)	1095
Mly113I	GGCGCC	1 cut(s)	1676
MlyI	GAGTC	4 cut(s)	21, 728, 868, 1583
MmeI	TCCRAC	2 cut(s)	133, 1464
Mox20I	TGGCCA	1 cut(s)	1095
MroI	TCCGGA	1 cut(s)	390
MroXI	GAANNNNTTC	2 cut(s)	416, 1046
MscI	TGGCCA	1 cut(s)	1095
MseI	TTAA	3 cut(s)	471, 657, 1380
Msp20I	TGGCCA	1 cut(s)	1095
MspA1I	CMGCKG	1 cut(s)	20
MspI	CCGG	5 cut(s)	391, 1387, 1679, 1694, 1754
MspR9I	CCNGG	1 cut(s)	361
MunI	CAATTG	1 cut(s)	26
MvaI	CCWGG	1 cut(s)	361
MvnI	CGCG	1 cut(s)	246
MwoI	GCNNNNNNNGC	6 cut(s)	193, 385, 574, 1266, 1448, 1754
NarI	GGCGCC	1 cut(s)	1676
NcoI	CCATGG	2 cut(s)	405, 984
NlaIII	CATG	6 cut(s)	409, 443, 669, 901, 988, 995
NlaIV	GGNNCC	6 cut(s)	419, 711, 1140, 1441, 1452, 1677
NmeAIII	GCCGAG	1 cut(s)	1380
NmuCI	GTSAC	1 cut(s)	720
NspI	RCATGY	1 cut(s)	443
PaeR7I	CTCGAG	1 cut(s)	1591
PaqCI	CACCTGC	1 cut(s)	998
PciI	ACATGT	1 cut(s)	439
PcsI	WCGNNNNNNNCGW	1 cut(s)	1589
PdmI	GAANNNNTTC	2 cut(s)	416, 1046
PfeI	GAWTC	1 cut(s)	1467
PflFI	GACNNNGTC	1 cut(s)	1364
PkrI	GCNGC	8 cut(s)	46, 189, 245, 378, 576, 1672, 1675, 1759
PleI	GAGTC	4 cut(s)	20, 727, 868, 1583
PluTI	GGCGCC	1 cut(s)	1679
PpsI	GAGTC	4 cut(s)	20, 727, 868, 1583
PscI	ACATGT	1 cut(s)	439
Psp6I	CCWGG	1 cut(s)	359
PspFI	CCCAGC	1 cut(s)	16
PspGI	CCWGG	1 cut(s)	359
PspN4I	GGNNCC	6 cut(s)	419, 711, 1140, 1441, 1452, 1677
PspPI	GGNCC	1 cut(s)	1138
PspXI	VCTCGAGB	1 cut(s)	1591
PstNI	CAGNNNCTG	1 cut(s)	217
PsuI	RGATCY	2 cut(s)	398, 709
PsyI	GACNNNGTC	1 cut(s)	1364
PvuII	CAGCTG	1 cut(s)	20
RsaI	GTAC	9 cut(s)	234, 521, 1066, 1078, 1547, 1631, 1650, 1740, 1752
RsaNI	GTAC	9 cut(s)	233, 520, 1065, 1077, 1546, 1630, 1649, 1739, 1751
SaqAI	TTAA	3 cut(s)	471, 657, 1380
SatI	GCNGC	8 cut(s)	45, 188, 244, 377, 575, 1671, 1674, 1758
Sau96I	GGNCC	1 cut(s)	1138
ScaI	AGTACT	4 cut(s)	234, 1066, 1078, 1547
SchI	GAGTC	4 cut(s)	21, 728, 868, 1583
ScrFI	CCNGG	1 cut(s)	361
SfaNI	GCATC	3 cut(s)	324, 338, 1278
SfoI	GGCGCC	1 cut(s)	1677
Sfr274I	CTCGAG	1 cut(s)	1591
SinI	GGWCC	1 cut(s)	1138
SlaI	CTCGAG	1 cut(s)	1591
SmlI	CTYRAG	6 cut(s)	49, 174, 445, 569, 714, 1591
SmoI	CTYRAG	6 cut(s)	49, 174, 445, 569, 714, 1591
SpeI	ACTAGT	1 cut(s)	1067
Sse9I	AATT	9 cut(s)	26, 35, 301, 344, 412, 1026, 1046, 1119, 1772
SsiI	CCGC	8 cut(s)	241, 244, 327, 1298, 1652, 1670, 1673, 1687
SspDI	GGCGCC	1 cut(s)	1675
SspI	AATATT	1 cut(s)	82
SspMI	CTAG	8 cut(s)	351, 677, 1062, 1068, 1086, 1251, 1314, 1712
StyD4I	CCNGG	1 cut(s)	359
StyI	CCWWGG	5 cut(s)	282, 405, 984, 1339, 1636
TaaI	ACNGT	3 cut(s)	742, 881, 1458
TaiI	ACGT	1 cut(s)	612
TaqI	TCGA	7 cut(s)	6, 117, 299, 312, 332, 1319, 1592
TaqII	GACCGA	1 cut(s)	1241
TasI	AATT	9 cut(s)	26, 35, 301, 344, 412, 1026, 1046, 1119, 1772
TatI	WGTACW	5 cut(s)	232, 1064, 1076, 1545, 1629
TauI	GCSGC	3 cut(s)	246, 1673, 1676
TfiI	GAWTC	1 cut(s)	1467
Tru1I	TTAA	3 cut(s)	471, 657, 1380
Tru9I	TTAA	3 cut(s)	471, 657, 1380
TscAI	CASTG	3 cut(s)	390, 1227, 1461
TseFI	GTSAC	1 cut(s)	720
TseI	GCWGC	5 cut(s)	44, 187, 376, 574, 1757
Tsp45I	GTSAC	1 cut(s)	720
TspDTI	ATGAA	6 cut(s)	28, 927, 980, 1008, 1281, 1601
TspGWI	ACGGA	2 cut(s)	213, 217
TspRI	CASTG	3 cut(s)	390, 1227, 1461
Tth111I	GACNNNGTC	1 cut(s)	1364
VpaK11BI	GGWCC	1 cut(s)	1138
XapI	RAATTY	3 cut(s)	301, 1046, 1772
XceI	RCATGY	1 cut(s)	443
XhoI	CTCGAG	1 cut(s)	1591
XmiI	GTMKAC	1 cut(s)	1166
XmnI	GAANNNNTTC	2 cut(s)	416, 1046
XspI	CTAG	8 cut(s)	351, 677, 1062, 1068, 1086, 1251, 1314, 1712
ZrmI	AGTACT	4 cut(s)	234, 1066, 1078, 1547

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.