Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0010439

Physical Location & Seq

Genomic Coordinates Forward (+)

74982892 .. 74989213

Gene Structure 6322 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0636400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

ATGGCCAAGATCAAGATTGGCATCAATGGATTCGGAAGGATTGGCCGGTTGGTGGCCAGAGTTGCTCTGCAGAGAGATGACATCGAACTCGTTGCCATTAACGATCCTTTCTTGACTGCTGATCACATGAGATACATGTTTAAGTACGACAGTGTTCATGGGCAGTGGAAGCATGGCGAGCTTAAGGTTAAGGATGAAAGCACACTTCTCTTTGGTGATAAGCCCGTTAAAGTTTTTGATTCTAGTTCTTTACTTACCTTACCTGATGAAATCCCATGGGGCGATTCTGGTGCTGAATTTGTCGTTGAGTCCTCCGGAGTTTACACAGATCGGGAGAGAGCATCTCACCACCTGAGGACTGGTGCAAAGAAAGTTATCATTTCTGCCCCAAGTGATGATGTTCCCATGTTTGTTGTGGGTGTTAATGAGAAGGACTACACTCCAGATCTTAACGTTGTTTCAAATGCAAGCTGCACTACTAACTGTCTTGCTCCACTGGCAAAGGTTATCCACGATAAATTTGGTATCATAGAGGGTCTTATGACCACTGTCCATTCTATTACTGCTACTCAAAAGACTGTTGATAGTCCACTAATGAAAGACTGGAGAGGTGGTAGAGCTGCTGGCCATAACATCATTCCCACTAGTACTGGAGCTGCTGAGGGTGTTGGTAAAGTGCTGCCGGCACTAAATGGGAAGTTGACAGGAATGGCCTTCAGGGTTCCCACTGTTGATGTTTCCGTGGTTGACCTCACAGTGAGACTTGAGAAGAAGGCTACTTATGATGAGATTAAAAATGCTATCAAGGAAGAATCTGAGGGTAACCTAAAGGGAATCCTCGGATATATGGACGATGATTTAGTGTCCACTGACTTTGTGGATAACCACAGGTCAAGCATTTTCGATGCCAAGGCTGGAATTGCTTTGAATGACAATTTTGTGAAGCTTGTCGCGTGGTATGACAATGAATGGGGTTACAGTCTTGATCTGATGTTATGTGGTGAAGGATTTGGAAGAATCGGCCGCTTGGTGACAAGGGTTGCTCTACAAAGAGATGATATCGAAATCGTTGGTATAAATGATCCGAACATCGACGCCAAGTATATGATCTACATGTTTAAGTACGATAGTGTTCACGGTAGGTGGAAGCACCAACATGAACTTTCGCTCAAGGACGAGAAGACCATTCTCTTTGGTGACCACCCAGTTAGAATTTTTGATGGCAGGGATCCCGCGTACATCCCATGGCAAGAGGTCGATGCTGAATTTGTGGTTGAGGCCTCCGGAAATATGACGGATCACGCCAGAGCTGCTCTCCATATGCAGTATGGTGCAAGGAAGGTTGTAATTACAGCTCCAAGTAGCGATGCTCCTATGTTCGTTGTAGGTGTAAATGAGAAGGAGTACACTCCAGATCTTAAAGTTGTTTCTAATGCAAGCTGTGCTATCAACTGTCTTGCTCCATTGGCAAAGGTTATCCATGAGAAATTTGGTATTGTGGAGGGTCTAATGACTACGGTCCACTCTATTACTGCTTTTCAAAAAGCCGTTGATGCACCATGTCAGAAAGACTGGAGAGTCGGTAGAGCTTCTGGGCGCAACATCATTCCTAGCTCCAATACTGCTAGGAATGATGTCAAGCTAGCCCTTTCTGGTGTTGGTAAAGTGCTGCCGGCACTGGAAGGGAAGCTAACAGGAATGGCCTTCTGCATTCCCACTGTTGATGTTTCTGTGGTTGACCTCACTGTGAGACTTGAGAAGCAGGCTACTTATGATGAGATCAAAAATGCTATCAAGATAGAATCTGAGGGTAGCCTGAAAGGAATCCTTGGATACACTGATGATGATGTGGTTTCCACCGACTTTTTAGGTGACAATAGGTCGAGCATTTTCGATGCCAAGGCTGGAATTGCTTTGAATGACAACTTTGTGAAGCTTGTCTCTTGGTATGATAACGAATGGGCTTATAGCTCACGAGTTATCGACTTGATCTGTCACATGGCCTCTGTTAGCCAAGATGAAAGTTCAGAGGCAGCTAATTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0001067 GO:0001158 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0035326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_4

Protein Analysis

681

Amino Acids

74.73

Weight (kDa)

5.41

Isoelectric Point (pI)

27.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gp_dh_N	PF00044	4 - 110	1.1e-29	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Gp_dh_C	PF02800	163 - 320	8.7e-69	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Gp_dh_N	PF00044	335 - 433	3.6e-28	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Gp_dh_C	PF02800	486 - 650	3.6e-58	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010439)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G28300
fragaria_vesca	FvH4_6g03310 FvH4_6g03310 FvH4_6g03310
malus_domestica	MD04G1221900.v1.1 MD12G1238000.v1.1
prunus_persica	Prupe.6G341000_v2.0.a1
pyrus_communis	pycom04g19640 pycom12g21880
rosa_chinensis	RchiOBHm_Chr3g0451801
rosa_laevigata	RLG00000025648
rosa_multiflora	Rmu_sc0006510.1_g000017
rosa_roxburghii	Rroxscaffold_164G00436310 Rroxscaffold_6G00428980
rosa_rugosa	Rorug02G0636300 Rorug02G0636400
rosa_samantha	Rh3AG037900 Rh3BG039000 Rh3CG037500 Rh3DG038300
rosa_wichuraiana	Rw3G002820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1577
AccII	CGCG	2 cut(s)	953, 1235
AccIII	TCCGGA	2 cut(s)	314, 1283
AciI	CCGC	2 cut(s)	1024, 1233
AclI	AACGTT	1 cut(s)	453
AclWI	GGATC	5 cut(s)	98, 1076, 1223, 1236, 1305
AcoI	YGGCCR	5 cut(s)	3, 43, 54, 625, 1021
AcsI	RAATTY	5 cut(s)	296, 518, 1212, 1265, 1487
AcuI	CTGAAG	1 cut(s)	700
AcyI	GRCGYC	1 cut(s)	1095
AfaI	GTAC	5 cut(s)	146, 649, 1124, 1238, 1406
AfiI	CCNNNNNNNGG	1 cut(s)	52
AflII	CTTAAG	1 cut(s)	182
AflIII	ACRYGT	2 cut(s)	135, 1113
AgsI	TTSAA	4 cut(s)	462, 928, 1541, 1918
AhdI	GACNNNNNGTC	1 cut(s)	1879
AhlI	ACTAGT	1 cut(s)	644
Alw26I	GTCTC	3 cut(s)	754, 1744, 1945
AlwI	GGATC	5 cut(s)	98, 1076, 1223, 1236, 1305
Aor13HI	TCCGGA	2 cut(s)	314, 1283
AoxI	GGCC	9 cut(s)	3, 43, 54, 625, 711, 1021, 1278, 1701, 2001
ApeKI	GCWGC	7 cut(s)	471, 620, 656, 679, 1310, 1669, 2033
ApoI	RAATTY	5 cut(s)	296, 518, 1212, 1265, 1487
AspLEI	GCGC	1 cut(s)	1599
AspS9I	GGNCC	1 cut(s)	1519
AsuHPI	GGTGA	6 cut(s)	227, 338, 1013, 1042, 1208, 1883
AsuNHI	GCTAGC	1 cut(s)	1642
AvaII	GGWCC	1 cut(s)	1519
AxyI	CCTNAGG	1 cut(s)	353
BalI	TGGCCA	3 cut(s)	5, 56, 627
BamHI	GGATCC	1 cut(s)	1228
BauI	CACGAG	1 cut(s)	1974
BbsI	GAAGAC	1 cut(s)	1187
BbvCI	CCTCAGC	1 cut(s)	660
BbvI	GCAGC	6 cut(s)	458, 607, 643, 666, 1297, 1656
BccI	CCATC	1 cut(s)	1214
BceAI	ACGGC	1 cut(s)	1532
BcgI	CGANNNNNNTGC	4 cut(s)	74, 108, 272, 306
BciVI	GTATCC	1 cut(s)	1826
BclI	TGATCA	1 cut(s)	121
BcoDI	GTCTC	3 cut(s)	754, 1744, 1945
BcuI	ACTAGT	1 cut(s)	644
BfaI	CTAG	5 cut(s)	243, 645, 1611, 1626, 1643
BfmI	CTRYAG	1 cut(s)	68
BfrI	CTTAAG	1 cut(s)	182
BfuI	GTATCC	1 cut(s)	1826
BglII	AGATCT	2 cut(s)	445, 1414
BisI	GCNGC	8 cut(s)	472, 621, 657, 680, 1024, 1311, 1670, 2034
BlsI	GCNGC	8 cut(s)	473, 622, 658, 681, 1025, 1312, 1671, 2035
BmcAI	AGTACT	1 cut(s)	649
Bme18I	GGWCC	1 cut(s)	1519
BmeRI	GACNNNNNGTC	1 cut(s)	1879
BmgT120I	GGNCC	1 cut(s)	1519
BmiI	GGNNCC	2 cut(s)	723, 1230
BmrI	ACTGGG	1 cut(s)	1199
BmsI	GCATC	7 cut(s)	30, 350, 895, 1249, 1357, 1543, 1885
BmtI	GCTAGC	1 cut(s)	1646
BmuI	ACTGGG	1 cut(s)	1199
BoxI	GACNNNNGTC	2 cut(s)	548, 1517
BpiI	GAAGAC	1 cut(s)	1187
BplI	GAGNNNNNCTC	4 cut(s)	328, 360, 1299, 1331
BpmI	CTGGAG	5 cut(s)	426, 625, 672, 1395, 1594
Bpu10I	CCTNAGC	1 cut(s)	660
BpuEI	CTTGAG	3 cut(s)	785, 1154, 1775
BsaBI	GATNNNNATC	1 cut(s)	20
BsaHI	GRCGYC	1 cut(s)	1095
BsaJI	CCNNGG	7 cut(s)	275, 741, 838, 909, 1244, 1828, 1899
BsaWI	WCCGGW	2 cut(s)	314, 1283
BsaXI	ACNNNNNCTCC	4 cut(s)	598, 628, 1567, 1597
Bsc4I	CCNNNNNNNGG	1 cut(s)	52
Bse118I	RCCGGY	3 cut(s)	45, 682, 1672
Bse1I	ACTGG	7 cut(s)	364, 501, 608, 655, 1205, 1577, 1683
Bse21I	CCTNAGG	1 cut(s)	353
Bse8I	GATNNNNATC	1 cut(s)	20
BseAI	TCCGGA	2 cut(s)	314, 1283
BseDI	CCNNGG	7 cut(s)	275, 741, 838, 909, 1244, 1828, 1899
BseGI	GGATG	2 cut(s)	199, 1239
BseJI	GATNNNNATC	1 cut(s)	20
BseLI	CCNNNNNNNGG	1 cut(s)	52
BseMII	CTCAG	4 cut(s)	344, 651, 807, 1797
BseNI	ACTGG	7 cut(s)	364, 501, 608, 655, 1205, 1577, 1683
BseX3I	CGGCCG	1 cut(s)	1021
BseXI	GCAGC	6 cut(s)	458, 607, 643, 666, 1297, 1656
BsgI	GTGCAG	1 cut(s)	457
Bsh1236I	CGCG	2 cut(s)	953, 1235
Bsh1285I	CGRYCG	1 cut(s)	1024
BshFI	GGCC	9 cut(s)	5, 45, 56, 627, 713, 1023, 1280, 1703, 2003
BsiEI	CGRYCG	1 cut(s)	1024
BsiSI	CCGG	5 cut(s)	46, 315, 683, 1284, 1673
BslI	CCNNNNNNNGG	1 cut(s)	52
BsmAI	GTCTC	3 cut(s)	754, 1744, 1945
BsmI	GAATGC	1 cut(s)	1710
BsnI	GGCC	9 cut(s)	5, 45, 56, 627, 713, 1023, 1280, 1703, 2003
Bsp13I	TCCGGA	2 cut(s)	314, 1283
Bsp19I	CCATGG	2 cut(s)	275, 1244
BspACI	CCGC	2 cut(s)	1024, 1233
BspANI	GGCC	9 cut(s)	5, 45, 56, 627, 713, 1023, 1280, 1703, 2003
BspCNI	CTCAG	4 cut(s)	345, 652, 808, 1798
BspEI	TCCGGA	2 cut(s)	314, 1283
BspFNI	CGCG	2 cut(s)	953, 1235
BspLI	GGNNCC	2 cut(s)	723, 1230
BspMAI	CTGCAG	1 cut(s)	72
BspOI	GCTAGC	1 cut(s)	1646
BspPI	GGATC	5 cut(s)	98, 1076, 1223, 1236, 1305
BspTI	CTTAAG	1 cut(s)	182
BsrFI	RCCGGY	3 cut(s)	45, 682, 1672
BsrI	ACTGG	7 cut(s)	364, 501, 608, 655, 1205, 1577, 1683
BssAI	RCCGGY	3 cut(s)	45, 682, 1672
BssECI	CCNNGG	7 cut(s)	275, 741, 838, 909, 1244, 1828, 1899
BssNI	GRCGYC	1 cut(s)	1095
BssSI	CACGAG	1 cut(s)	1974
BssT1I	CCWWGG	5 cut(s)	275, 909, 1244, 1828, 1899
Bst2BI	CACGAG	1 cut(s)	1974
BstACI	GRCGYC	1 cut(s)	1095
BstAFI	CTTAAG	1 cut(s)	182
BstAPI	GCANNNNNTGC	1 cut(s)	1442
BstC8I	GCNNGC	8 cut(s)	179, 469, 625, 684, 1438, 1644, 1674, 1764
BstDEI	CTNAG	4 cut(s)	353, 660, 816, 1806
BstDSI	CCRYGG	3 cut(s)	275, 741, 1244
BstEII	GGTNACC	2 cut(s)	821, 1196
BstF5I	GGATG	2 cut(s)	199, 1239
BstFNI	CGCG	2 cut(s)	953, 1235
BstHHI	GCGC	1 cut(s)	1599
BstMAI	GTCTC	3 cut(s)	754, 1744, 1945
BstMCI	CGRYCG	1 cut(s)	1024
BstNSI	RCATGY	2 cut(s)	139, 1117
BstPAI	GACNNNNGTC	2 cut(s)	548, 1517
BstPI	GGTNACC	2 cut(s)	821, 1196
BstSFI	CTRYAG	1 cut(s)	68
BstUI	CGCG	2 cut(s)	953, 1235
BstV1I	GCAGC	6 cut(s)	458, 607, 643, 666, 1297, 1656
BstV2I	GAAGAC	1 cut(s)	1187
BstX2I	RGATCY	3 cut(s)	445, 1228, 1414
BstYI	RGATCY	3 cut(s)	445, 1228, 1414
BstZI	CGGCCG	1 cut(s)	1021
Bsu36I	CCTNAGG	1 cut(s)	353
BsuI	GTATCC	1 cut(s)	1826
BsuRI	GGCC	9 cut(s)	5, 45, 56, 627, 713, 1023, 1280, 1703, 2003
BtgI	CCRYGG	3 cut(s)	275, 741, 1244
BtgZI	GCGATG	1 cut(s)	1380
BtsCI	GGATG	2 cut(s)	199, 1239
BtsI	GCAGTG	1 cut(s)	170
Cac8I	GCNNGC	8 cut(s)	179, 469, 625, 684, 1438, 1644, 1674, 1764
CfoI	GCGC	1 cut(s)	1599
Cfr10I	RCCGGY	3 cut(s)	45, 682, 1672
Cfr13I	GGNCC	1 cut(s)	1519
CseI	GACGC	1 cut(s)	1103
Csp6I	GTAC	5 cut(s)	145, 648, 1123, 1237, 1405
CspCI	CAANNNNNGTGG	2 cut(s)	856, 891
CviQI	GTAC	5 cut(s)	145, 648, 1123, 1237, 1405
DdeI	CTNAG	4 cut(s)	353, 660, 816, 1806
DrdI	GACNNNNNNGTC	1 cut(s)	1577
DriI	GACNNNNNGTC	1 cut(s)	1879
DseDI	GACNNNNNNGTC	1 cut(s)	1577
EaeI	YGGCCR	5 cut(s)	3, 43, 54, 625, 1021
EagI	CGGCCG	1 cut(s)	1021
Eam1105I	GACNNNNNGTC	1 cut(s)	1879
EclXI	CGGCCG	1 cut(s)	1021
Eco130I	CCWWGG	5 cut(s)	275, 909, 1244, 1828, 1899
Eco147I	AGGCCT	1 cut(s)	1280
Eco32I	GATATC	1 cut(s)	1060
Eco47I	GGWCC	1 cut(s)	1519
Eco52I	CGGCCG	1 cut(s)	1021
Eco57I	CTGAAG	1 cut(s)	700
Eco81I	CCTNAGG	1 cut(s)	353
Eco91I	GGTNACC	2 cut(s)	821, 1196
EcoO65I	GGTNACC	2 cut(s)	821, 1196
EcoRV	GATATC	1 cut(s)	1060
EcoT14I	CCWWGG	5 cut(s)	275, 909, 1244, 1828, 1899
ErhI	CCWWGG	5 cut(s)	275, 909, 1244, 1828, 1899
FalI	AAGNNNNNCTT	2 cut(s)	1812, 1844
FauI	CCCGC	1 cut(s)	1240
FauNDI	CATATG	1 cut(s)	1320
FbaI	TGATCA	1 cut(s)	121
Fnu4HI	GCNGC	8 cut(s)	472, 621, 657, 680, 1024, 1311, 1670, 2034
FokI	GGATG	2 cut(s)	206, 1226
Fsp4HI	GCNGC	8 cut(s)	472, 621, 657, 680, 1024, 1311, 1670, 2034
FspBI	CTAG	5 cut(s)	243, 645, 1611, 1626, 1643
GlaI	GCGC	1 cut(s)	1598
GluI	GCNGC	8 cut(s)	472, 621, 657, 680, 1024, 1311, 1670, 2034
GsuI	CTGGAG	5 cut(s)	426, 625, 672, 1395, 1594
HaeIII	GGCC	9 cut(s)	5, 45, 56, 627, 713, 1023, 1280, 1703, 2003
HapII	CCGG	5 cut(s)	46, 315, 683, 1284, 1673
HgaI	GACGC	1 cut(s)	1103
HhaI	GCGC	1 cut(s)	1599
Hin1I	GRCGYC	1 cut(s)	1095
Hin6I	GCGC	1 cut(s)	1597
HinP1I	GCGC	1 cut(s)	1597
HincII	GTYRAC	3 cut(s)	702, 748, 1738
HindII	GTYRAC	3 cut(s)	702, 748, 1738
HindIII	AAGCTT	2 cut(s)	944, 1934
HpaII	CCGG	5 cut(s)	46, 315, 683, 1284, 1673
HphI	GGTGA	6 cut(s)	227, 338, 1013, 1042, 1208, 1883
Hpy166II	GTNNAC	9 cut(s)	322, 590, 702, 748, 867, 1135, 1407, 1522, 1738
Hpy188I	TCNGA	8 cut(s)	35, 817, 842, 990, 1086, 1566, 1807, 2029
Hpy8I	GTNNAC	9 cut(s)	322, 590, 702, 748, 867, 1135, 1407, 1522, 1738
Hpy99I	CGWCG	1 cut(s)	1097
HpyAV	CCTTC	9 cut(s)	30, 424, 724, 766, 998, 1333, 1393, 1676, 1714
HpyCH4IV	ACGT	1 cut(s)	453
HpyCH4V	TGCA	9 cut(s)	70, 365, 467, 474, 1324, 1334, 1436, 1556, 1710
HpyF3I	CTNAG	4 cut(s)	353, 660, 816, 1806
HpySE526I	ACGT	1 cut(s)	453
Hsp92I	GRCGYC	1 cut(s)	1095
HspAI	GCGC	1 cut(s)	1597
Kpn2I	TCCGGA	2 cut(s)	314, 1283
KroI	GCCGGC	2 cut(s)	682, 1672
KroNI	GCCGGC	2 cut(s)	684, 1674
Ksp22I	TGATCA	1 cut(s)	121
LmnI	GCTCC	6 cut(s)	496, 653, 1360, 1375, 1465, 1619
Lsp1109I	GCAGC	6 cut(s)	458, 607, 643, 666, 1297, 1656
LweI	GCATC	7 cut(s)	30, 350, 895, 1249, 1357, 1543, 1885
MaeI	CTAG	5 cut(s)	243, 645, 1611, 1626, 1643
MaeII	ACGT	1 cut(s)	453
MaeIII	GTNAC	6 cut(s)	821, 974, 1030, 1196, 1871, 1994
MboII	GAAGA	4 cut(s)	781, 821, 1026, 1192
MflI	RGATCY	3 cut(s)	445, 1228, 1414
MlsI	TGGCCA	3 cut(s)	5, 56, 627
MluNI	TGGCCA	3 cut(s)	5, 56, 627
MlyI	GAGTC	2 cut(s)	317, 1587
Mox20I	TGGCCA	3 cut(s)	5, 56, 627
MroI	TCCGGA	2 cut(s)	314, 1283
MroNI	GCCGGC	2 cut(s)	682, 1672
MscI	TGGCCA	3 cut(s)	5, 56, 627
MslI	CAYNNNNRTG	1 cut(s)	1155
Msp20I	TGGCCA	3 cut(s)	5, 56, 627
MspCI	CTTAAG	1 cut(s)	182
MspI	CCGG	5 cut(s)	46, 315, 683, 1284, 1673
Mva1269I	GAATGC	1 cut(s)	1710
MvnI	CGCG	2 cut(s)	953, 1235
NaeI	GCCGGC	2 cut(s)	684, 1674
NcoI	CCATGG	2 cut(s)	275, 1244
NdeI	CATATG	1 cut(s)	1320
NgoMIV	GCCGGC	2 cut(s)	682, 1672
NheI	GCTAGC	1 cut(s)	1642
NlaIV	GGNNCC	2 cut(s)	723, 1230
NmuCI	GTSAC	4 cut(s)	1030, 1196, 1871, 1994
NspI	RCATGY	2 cut(s)	139, 1117
PceI	AGGCCT	1 cut(s)	1280
PciI	ACATGT	2 cut(s)	135, 1113
PctI	GAATGC	1 cut(s)	1710
PdiI	GCCGGC	2 cut(s)	684, 1674
PfeI	GAWTC	8 cut(s)	30, 239, 284, 812, 834, 1017, 1802, 1824
PkrI	GCNGC	8 cut(s)	473, 622, 658, 681, 1025, 1312, 1671, 2035
PleI	GAGTC	2 cut(s)	316, 1586
PpsI	GAGTC	2 cut(s)	316, 1586
PscI	ACATGT	2 cut(s)	135, 1113
PshAI	GACNNNNGTC	2 cut(s)	548, 1517
Psp1406I	AACGTT	1 cut(s)	453
PspEI	GGTNACC	2 cut(s)	821, 1196
PspN4I	GGNNCC	2 cut(s)	723, 1230
PspPI	GGNCC	1 cut(s)	1519
PstI	CTGCAG	1 cut(s)	72
PsuI	RGATCY	3 cut(s)	445, 1228, 1414
RsaI	GTAC	5 cut(s)	146, 649, 1124, 1238, 1406
RsaNI	GTAC	5 cut(s)	145, 648, 1123, 1237, 1405
RseI	CAYNNNNRTG	1 cut(s)	1155
SatI	GCNGC	8 cut(s)	472, 621, 657, 680, 1024, 1311, 1670, 2034
Sau96I	GGNCC	1 cut(s)	1519
ScaI	AGTACT	1 cut(s)	649
SchI	GAGTC	2 cut(s)	317, 1587
SfaNI	GCATC	7 cut(s)	30, 350, 895, 1249, 1357, 1543, 1885
SfcI	CTRYAG	1 cut(s)	68
SinI	GGWCC	1 cut(s)	1519
SmiMI	CAYNNNNRTG	1 cut(s)	1155
SmlI	CTYRAG	4 cut(s)	182, 764, 1169, 1754
SmoI	CTYRAG	4 cut(s)	182, 764, 1169, 1754
SpeI	ACTAGT	1 cut(s)	644
SseBI	AGGCCT	1 cut(s)	1280
SsiI	CCGC	2 cut(s)	1024, 1233
SspMI	CTAG	5 cut(s)	243, 645, 1611, 1626, 1643
StuI	AGGCCT	1 cut(s)	1280
StyI	CCWWGG	5 cut(s)	275, 909, 1244, 1828, 1899
TaiI	ACGT	1 cut(s)	456
TaqI	TCGA	8 cut(s)	84, 903, 1062, 1092, 1257, 1883, 1893, 1983
TatI	WGTACW	2 cut(s)	647, 1404
TauI	GCSGC	1 cut(s)	1026
TfiI	GAWTC	8 cut(s)	30, 239, 284, 812, 834, 1017, 1802, 1824
TseFI	GTSAC	4 cut(s)	1030, 1196, 1871, 1994
TseI	GCWGC	7 cut(s)	471, 620, 656, 679, 1310, 1669, 2033
Tsp45I	GTSAC	4 cut(s)	1030, 1196, 1871, 1994
TspDTI	ATGAA	7 cut(s)	146, 210, 282, 611, 981, 1173, 2034
TspGWI	ACGGA	2 cut(s)	730, 1310
Vha464I	CTTAAG	1 cut(s)	182
VpaK11BI	GGWCC	1 cut(s)	1519
XapI	RAATTY	5 cut(s)	296, 518, 1212, 1265, 1487
XceI	RCATGY	2 cut(s)	139, 1117
XcmI	CCANNNNNNNNNTGG	6 cut(s)	356, 412, 518, 874, 1325, 1487
XspI	CTAG	5 cut(s)	243, 645, 1611, 1626, 1643
ZrmI	AGTACT	1 cut(s)	649

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.