Rroxscaffold_7G00157780

U-box domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
1492576 .. 1497632
5057 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00157780.1

Sequence Viewer

Length: 2730 bp
ATGGCCACTCCCAATTCCCCGTATGACGACTGTCCGCCGATCAACGCCACGGCGGTGGCCGTCGACAAGGACAACAAGAACAGCAACTTGGCCGTGCGATGGGCCATTGATCATCTTTCGATCTCGCAACCTTATCTCATTTTAATCCATGTCAGGCACAAAAGTCATCACCACGATGGTGATGGAGGCGATCATGATCCTTACACTGTGTTCATTCCTTTCCGTGGATACTGTGCTCGTAAGGGGGTTCAAATGAAAGAGATCATCCTTGATGAACATGATGTGGCTAGAGCACTTTTGGATTACATCAACAACAACTACATTAACAATATTGTAGTTGGTGCATCAACGAGGAATGCTCTTACAAGGAGACTCAAAGGTAATACGGATGTTGCGAGCATCTTGACAAAATCTGCGCCAGAGTTTTGTTCGGTATATGTGATACAAAAAGGGAAGATGCTCTCTGTGCGGACGGCTAAGAGGCCTGTGGTTAATACTGCTGCACCACCAAAACAACCGATCGTGCAGGGACTCCCGCCTCATATGCCAGCTGAATTAAGTGGAGGAGACAATGGAGTTAGGCCTCCAACAAGGGAAAGAACAAGGAATGGTCCAGAGAAAATGGTTGCAATACGCGAGAGGACGAGGAGTGCTCCAACAAATCTGACACTGGATCAGATTGACATTCAAAGCCATGAATCAGGATCAAGGTCTTCAGTAAGTAGTGCTCGCAATTCAAATGCTGAAGAAAATGAGTTTTCAGGCCCAATTCATCCATATGGATCACTGGATATGTCTTCCCAAAACTTGGATTTCTGTAGTCCGTCCTGTTCTCCCAGGGACTCATCCAGACAATCTGCACGGGAGATTGAAGCCGAAATGAGAAGATTGAAGCAGGAATTGAAACAAACAATGGACATGTACAGCTCTGCATGCAAAGAAGCTATCTCAGCCAAAAATAAGGCTAAAGAGATTGATCAGTGGAAGCTGGAGGAGGCTCGTAAGTTTGAGGAAGCCAGGCTTGCTGAGGAGAATGCTCTTGCCATTGCAGAGATGGAGAAGGCTAAGTGCAAAGCTGCCATAGAAGCAGCTGAGGCAGCACAGAGGGTGGCTGAGATGGAAGCTCAGAGAAGAATACAGGCAGAGAAGAAGGCAAAGAAAGAGGCAGAAGAGAAGAATCGTGCATTGACTGCTTTGGCACATAATGACGTCCGATATAGAAAGTATACCATAAAAGAAATTGAAGAAGCCACCGAAAACTTTGCAGAATCGATGAAAATTGGTGAAGGTGGATATGGACCTGTTTACAAAGGCAAACTTGACCACACACCAGTTGCCATCAAGGTCTTAAGGCCTGATGCTGCTCAAGGGAGGAAGCAATTCCAACAGGAGGTTGAGGTCCTGAGCTGCATTAGGTATCCTAACATGGTCCTCCTACTTGGTGCCTGCCCTGAATACGGATGCCTGGTGTATGAATTCATGGACAATGGAAGCTTAGAAGATCGGCTATTGAGAAGAGGTAACACCCCTCCGATTCCATGGAGGAAACGATTCAAAATAGCTGCTGAGATTTCAACAGCACTACTGTTTCTTCACCATACGAAGCCGGAACCCCTTGTGCACCGAGACCTTAAGCCCGCCAACATCCTCTTAGACCATAACTATGTGAGCAAAATTAGTGATGTTGGCCTAGCACGCTTAGTCCCGGCATCAGTTGCTGATGAGGTCACACAATATCACATGACTTCAGCTGCAGGCACATTTTGTTACATAGATCCCGAATACCAGCAAACAGGCATGTTAACAACAAAGTCAGATATATACTCTTTGGGTATAGTGCTACTCCAGATTATCACAGCCAAGCCTGCTATGGGTCTTTCACACCATGTCAGGAGGTCCATTGAGAAAGGAACATTTTCAGATATGCTTGATCCCACGGTGCTGGACTGGCCCGTTGAAGAGGCTCTCGCATTTGCTAATTTGGCTTTGCAGTGCACGGAGCTAAGAAAAAAGGATAGGCCAGATCTTGGTAAAGTTATAGTGCCGGAACTCAACCGATTAAGAGATTTTGGAAAGAATAATGTTGATGCACTTACTAGTCATGGATATAGCAGCACTGCTCATAGCCAAAGTTCACGTCCTTCCAATTCAAGAACATCCATTATAAATAGTCAGATGGGTAATTCCAAGGGATTTATGATAGGAAAATGGGTTCCTTGGGTTTTGAAGGCAGGGATTATAGGGTTGGTAATGTTTGCTGGATTTACATATGGAGATCAAATGGAGGATCCAGAGACTGGTTTACTGTGTATTAGTGATTGTACTACATGTCCAGTCATATGTTCACCACCTCCTGCTCAAGTGGAGTCACATCCACCACCAGCACCATCATACCCACCACCAGTACCATCATCCCCACCACCAGTCCACCACTCGCCACCACCGCCTCAGTTTTACTACTACTCCACGCCACACTCACCGCCACCATCACCGCCAAAAGAATCAAAATCACCTCCATCATCTTCTTCATGGGGACCACCCCCGCCACGTTTTGAATACTTCTACAACATGCCTCCTTCCGGTCCTGTGCTGCCAACTACAGCAGGACTACTGCATAACAATTCCTTTCCCTACTATTACTTTTACGCATCAGGGGCTTCTTCTGTTTCTGCTCATGCGGCCTTGTTTTTGATTATCTTCTTGGTTCAGCTTGTGTTTTCTTTTTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

909

Amino Acids

100.78

Weight (kDa)

8.01

Isoelectric Point (pI)

55.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 422 - 674 8.3e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 425 - 679 4.8e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2165
AatII GACGTC 1 cut(s) 1212
AccB1I GGYRCC 1 cut(s) 1442
AccB7I CCANNNNNTGG 3 cut(s) 808, 2027, 2297
AccI GTMKAC 2 cut(s) 63, 1226
AccII CGCG 1 cut(s) 636
AclWI GGATC 8 cut(s) 191, 681, 712, 790, 1769, 1925, 2282, 2295
AcoI YGGCCR 3 cut(s) 3, 57, 90
AcsI RAATTY 1 cut(s) 1475
AcuI CTGAAG 3 cut(s) 699, 765, 1731
AcyI GRCGYC 1 cut(s) 1209
AfaI GTAC 3 cut(s) 923, 2323, 2406
AfiI CCNNNNNNNGG 9 cut(s) 99, 224, 808, 1390, 1457, 1871, 2027, 2297, 2579
AflII CTTAAG 2 cut(s) 1348, 1631
AflIII ACRYGT 2 cut(s) 918, 2327
AhlI ACTAGT 1 cut(s) 2096
AjiI CACGTC 1 cut(s) 2138
AjnI CCWGG 3 cut(s) 836, 1016, 1464
AjuI GAANNNNNNNTTGG 2 cut(s) 71, 103
AleI CACNNNNGTG 2 cut(s) 53, 177
AloI GAACNNNNNNTCC 2 cut(s) 2196, 2228
Alw21I GWGCWC 6 cut(s) 238, 295, 655, 730, 1623, 1997
Alw26I GTCTC 4 cut(s) 364, 561, 1620, 2288
Alw44I GTGCAC 2 cut(s) 1619, 1993
AlwI GGATC 8 cut(s) 191, 681, 712, 790, 1769, 1925, 2282, 2295
AlwNI CAGNNNCTG 2 cut(s) 1718, 2297
ApaLI GTGCAC 2 cut(s) 1619, 1993
ApoI RAATTY 1 cut(s) 1475
ArsI GACNNNNNNTTYG 2 cut(s) 2122, 2154
Asp700I GAANNNNTTC 3 cut(s) 1379, 1550, 1915
AspLEI GCGC 1 cut(s) 418
AsuC2I CCSGG 1 cut(s) 1706
AsuHPI GGTGA 8 cut(s) 161, 191, 1295, 1586, 2337, 2469, 2481, 2502
AvaII GGWCC 7 cut(s) 611, 1298, 1399, 1429, 1896, 2534, 2582
BaeGI GKGCMC 2 cut(s) 1623, 1997
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 2287
BanI GGYRCC 1 cut(s) 1442
BbsI GAAGAC 2 cut(s) 705, 789
Bbv12I GWGCWC 6 cut(s) 238, 295, 655, 730, 1623, 1997
BbvCI CCTCAGC 2 cut(s) 1026, 1092
BceAI ACGGC 4 cut(s) 44, 66, 77, 489
BcgI CGANNNNNNTGC 2 cut(s) 1244, 1278
BciT130I CCWGG 3 cut(s) 838, 1018, 1466
BciVI GTATCC 2 cut(s) 221, 1428
BclI TGATCA 2 cut(s) 109, 976
BcnI CCSGG 1 cut(s) 1706
BcoDI GTCTC 4 cut(s) 364, 561, 1620, 2288
BcuI ACTAGT 1 cut(s) 2096
BfaI CTAG 3 cut(s) 288, 1691, 2097
BfmI CTRYAG 3 cut(s) 817, 1752, 2598
BfrI CTTAAG 2 cut(s) 1348, 1631
BfuI GTATCC 2 cut(s) 221, 1428
BglII AGATCT 1 cut(s) 2023
Bme1390I CCNGG 4 cut(s) 838, 1018, 1466, 1706
Bme18I GGWCC 7 cut(s) 611, 1298, 1399, 1429, 1896, 2534, 2582
BmgBI CACGTC 1 cut(s) 2138
BmiI GGNNCC 5 cut(s) 1444, 1611, 2214, 2289, 2535
BmrFI CCNGG 4 cut(s) 838, 1018, 1466, 1706
BmsI GCATC 8 cut(s) 353, 408, 447, 1348, 1451, 1718, 2077, 2657
BoxI GACNNNNGTC 1 cut(s) 30
BpiI GAAGAC 2 cut(s) 705, 789
BplI GAGNNNNNCTC 4 cut(s) 343, 375, 637, 669
BpmI CTGGAG 2 cut(s) 1010, 1829
Bpu10I CCTNAGC 3 cut(s) 1026, 1092, 1403
BpuEI CTTGAG 2 cut(s) 1350, 2343
BpuMI CCSGG 1 cut(s) 1706
Bsa29I ATCGAT 1 cut(s) 1271
BsaBI GATNNNNATC 1 cut(s) 195
BsaHI GRCGYC 1 cut(s) 1209
BsaI GGTCTC 1 cut(s) 1620
BsaJI CCNNGG 8 cut(s) 48, 223, 836, 837, 1538, 1935, 2187, 2216
BsaWI WCCGGW 1 cut(s) 2579
BsaXI ACNNNNNCTCC 2 cut(s) 2447, 2477
Bsc4I CCNNNNNNNGG 9 cut(s) 99, 224, 808, 1390, 1457, 1871, 2027, 2297, 2579
Bse1I ACTGG 8 cut(s) 675, 792, 1331, 1952, 2302, 2333, 2402, 2423
Bse3DI GCAATG 1 cut(s) 1044
Bse8I GATNNNNATC 1 cut(s) 195
BseBI CCWGG 3 cut(s) 838, 1018, 1466
BseCI ATCGAT 1 cut(s) 1271
BseDI CCNNGG 8 cut(s) 48, 223, 836, 837, 1538, 1935, 2187, 2216
BseGI GGATG 9 cut(s) 264, 394, 772, 845, 1466, 1644, 2156, 2371, 2411
BseJI GATNNNNATC 1 cut(s) 195
BseLI CCNNNNNNNGG 9 cut(s) 99, 224, 808, 1390, 1457, 1871, 2027, 2297, 2579
BseMI GCAATG 1 cut(s) 1044
BseMII CTCAG 8 cut(s) 963, 1017, 1083, 1104, 1139, 1394, 1557, 2462
BseNI ACTGG 8 cut(s) 675, 792, 1331, 1952, 2302, 2333, 2402, 2423
BseRI GAGGAG 4 cut(s) 579, 661, 1007, 1043
BseSI GKGCMC 2 cut(s) 1623, 1997
BsgI GTGCAG 3 cut(s) 486, 545, 843
Bsh1236I CGCG 1 cut(s) 636
Bsh1285I CGRYCG 1 cut(s) 522
BshNI GGYRCC 1 cut(s) 1442
BshVI ATCGAT 1 cut(s) 1271
BsiEI CGRYCG 1 cut(s) 522
BsiHKAI GWGCWC 6 cut(s) 238, 295, 655, 730, 1623, 1997
BsiSI CCGG 4 cut(s) 1607, 1706, 2045, 2580
BslFI GGGAC 4 cut(s) 543, 854, 1688, 2547
BslI CCNNNNNNNGG 9 cut(s) 99, 224, 808, 1390, 1457, 1871, 2027, 2297, 2579
BsmAI GTCTC 4 cut(s) 364, 561, 1620, 2288
BsmFI GGGAC 4 cut(s) 543, 854, 1688, 2547
BsmI GAATGC 2 cut(s) 361, 1039
Bso31I GGTCTC 1 cut(s) 1620
Bsp1286I GDGCHC 6 cut(s) 238, 295, 655, 730, 1623, 1997
Bsp1407I TGTACA 1 cut(s) 921
Bsp19I CCATGG 1 cut(s) 1538
BspCNI CTCAG 8 cut(s) 962, 1018, 1084, 1105, 1138, 1395, 1558, 2461
BspDI ATCGAT 1 cut(s) 1271
BspFNI CGCG 1 cut(s) 636
BspHI TCATGA 1 cut(s) 193
BspLI GGNNCC 5 cut(s) 1444, 1611, 2214, 2289, 2535
BspMAI CTGCAG 1 cut(s) 1756
BspPI GGATC 8 cut(s) 191, 681, 712, 790, 1769, 1925, 2282, 2295
BspT107I GGYRCC 1 cut(s) 1442
BspTI CTTAAG 2 cut(s) 1348, 1631
BspTNI GGTCTC 1 cut(s) 1620
BsrDI GCAATG 1 cut(s) 1044
BsrGI TGTACA 1 cut(s) 921
BsrI ACTGG 8 cut(s) 675, 792, 1331, 1952, 2302, 2333, 2402, 2423
BssECI CCNNGG 8 cut(s) 48, 223, 836, 837, 1538, 1935, 2187, 2216
BssNAI GTATAC 1 cut(s) 1227
BssNI GRCGYC 1 cut(s) 1209
BssT1I CCWWGG 3 cut(s) 1538, 2187, 2216
Bst1107I GTATAC 1 cut(s) 1227
Bst2UI CCWGG 3 cut(s) 838, 1018, 1466
Bst4CI ACNGT 6 cut(s) 32, 208, 233, 1587, 1939, 2307
Bst6I CTCTTC 3 cut(s) 1164, 1510, 1953
BstACI GRCGYC 1 cut(s) 1209
BstAFI CTTAAG 2 cut(s) 1348, 1631
BstAPI GCANNNNNTGC 2 cut(s) 1190, 1715
BstAUI TGTACA 1 cut(s) 921
BstDSI CCRYGG 4 cut(s) 48, 223, 1538, 1935
BstF5I GGATG 9 cut(s) 264, 394, 772, 845, 1466, 1644, 2156, 2371, 2411
BstFNI CGCG 1 cut(s) 636
BstHHI GCGC 1 cut(s) 418
BstMAI GTCTC 4 cut(s) 364, 561, 1620, 2288
BstMCI CGRYCG 1 cut(s) 522
BstNI CCWGG 3 cut(s) 838, 1018, 1466
BstNSI RCATGY 5 cut(s) 922, 936, 1801, 2331, 2572
BstPAI GACNNNNGTC 1 cut(s) 30
BstSCI CCNGG 4 cut(s) 836, 1016, 1464, 1704
BstSFI CTRYAG 3 cut(s) 817, 1752, 2598
BstSLI GKGCMC 2 cut(s) 1623, 1997
BstUI CGCG 1 cut(s) 636
BstV2I GAAGAC 2 cut(s) 705, 789
BstX2I RGATCY 3 cut(s) 1774, 2023, 2287
BstXI CCANNNNNNTGG 2 cut(s) 55, 1942
BstYI RGATCY 3 cut(s) 1774, 2023, 2287
BstZ17I GTATAC 1 cut(s) 1227
Bsu15I ATCGAT 1 cut(s) 1271
BsuI GTATCC 2 cut(s) 221, 1428
BsuTUI ATCGAT 1 cut(s) 1271
BtgI CCRYGG 4 cut(s) 48, 223, 1538, 1935
BtgZI GCGATG 1 cut(s) 112
BtrI CACGTC 1 cut(s) 2138
BtsCI GGATG 9 cut(s) 264, 394, 772, 845, 1466, 1644, 2156, 2371, 2411
BtsI GCAGTG 2 cut(s) 1997, 2115
BtsIMutI CAGTG 6 cut(s) 204, 668, 785, 986, 1997, 2115
CaiI CAGNNNCTG 2 cut(s) 1718, 2297
CciI TCATGA 1 cut(s) 193
CfoI GCGC 1 cut(s) 418
ClaI ATCGAT 1 cut(s) 1271
Csp6I GTAC 3 cut(s) 922, 2322, 2405
CviQI GTAC 3 cut(s) 922, 2322, 2405
EaeI YGGCCR 3 cut(s) 3, 57, 90
Eam1104I CTCTTC 3 cut(s) 1164, 1510, 1953
EarI CTCTTC 3 cut(s) 1164, 1510, 1953
EciI GGCGGA 1 cut(s) 24
Eco130I CCWWGG 3 cut(s) 1538, 2187, 2216
Eco147I AGGCCT 3 cut(s) 484, 583, 1354
Eco31I GGTCTC 1 cut(s) 1620
Eco47I GGWCC 7 cut(s) 611, 1298, 1399, 1429, 1896, 2534, 2582
Eco57I CTGAAG 3 cut(s) 699, 765, 1731
EcoO109I RGGNCCY 1 cut(s) 1399
EcoRI GAATTC 1 cut(s) 1475
EcoRII CCWGG 3 cut(s) 836, 1016, 1464
EcoT14I CCWWGG 3 cut(s) 1538, 2187, 2216
ErhI CCWWGG 3 cut(s) 1538, 2187, 2216
FalI AAGNNNNNCTT 4 cut(s) 1005, 1037, 1302, 1334
FaqI GGGAC 4 cut(s) 543, 854, 1688, 2547
FauI CCCGC 3 cut(s) 543, 1645, 2550
FauNDI CATATG 4 cut(s) 543, 778, 2269, 2339
FbaI TGATCA 2 cut(s) 109, 976
FblI GTMKAC 2 cut(s) 63, 1226
FokI GGATG 9 cut(s) 251, 401, 759, 832, 1473, 1631, 2143, 2358, 2398
FspBI CTAG 3 cut(s) 288, 1691, 2097
GlaI GCGC 1 cut(s) 417
GsuI CTGGAG 2 cut(s) 1010, 1829
HapII CCGG 4 cut(s) 1607, 1706, 2045, 2580
HhaI GCGC 1 cut(s) 418
Hin1I GRCGYC 1 cut(s) 1209
Hin6I GCGC 1 cut(s) 416
HinP1I GCGC 1 cut(s) 416
HincII GTYRAC 2 cut(s) 64, 1803
HindII GTYRAC 2 cut(s) 64, 1803
HindIII AAGCTT 1 cut(s) 1492
HpaI GTTAAC 1 cut(s) 1803
HpaII CCGG 4 cut(s) 1607, 1706, 2045, 2580
HphI GGTGA 8 cut(s) 161, 191, 1295, 1586, 2337, 2469, 2481, 2502
Hpy188I TCNGA 8 cut(s) 666, 678, 1128, 1214, 1533, 1816, 1921, 2175
Hpy99I CGWCG 1 cut(s) 65
HpyAV CCTTC 6 cut(s) 1054, 1144, 1280, 2151, 2221, 2586
HpyCH4III ACNGT 6 cut(s) 32, 208, 233, 1587, 1939, 2307
HpyCH4IV ACGT 3 cut(s) 1209, 2137, 2548
HpySE526I ACGT 3 cut(s) 1209, 2137, 2548
Hsp92I GRCGYC 1 cut(s) 1209
HspAI GCGC 1 cut(s) 416
Ksp22I TGATCA 2 cut(s) 109, 976
KspAI GTTAAC 1 cut(s) 1803
LmnI GCTCC 2 cut(s) 658, 1999
LweI GCATC 8 cut(s) 353, 408, 447, 1348, 1451, 1718, 2077, 2657
MaeI CTAG 3 cut(s) 288, 1691, 2097
MaeII ACGT 3 cut(s) 1209, 2137, 2548
MaeIII GTNAC 4 cut(s) 1520, 1726, 1766, 2367
MflI RGATCY 3 cut(s) 1774, 2023, 2287
MhlI GDGCHC 6 cut(s) 238, 295, 655, 730, 1623, 1997
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 4 cut(s) 366, 525, 836, 2375
MmeI TCCRAC 3 cut(s) 611, 680, 1408
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 3 cut(s) 1379, 1550, 1915
MscI TGGCCA 1 cut(s) 5
MseI TTAA 8 cut(s) 143, 324, 492, 557, 1349, 1632, 1802, 2060
MslI CAYNNNNRTG 5 cut(s) 53, 174, 177, 777, 1662
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 3 cut(s) 551, 1091, 1751
MspCI CTTAAG 2 cut(s) 1348, 1631
MspI CCGG 4 cut(s) 1607, 1706, 2045, 2580
MspR9I CCNGG 4 cut(s) 838, 1018, 1466, 1706
Mva1269I GAATGC 2 cut(s) 361, 1039
MvaI CCWGG 3 cut(s) 838, 1018, 1466
MvnI CGCG 1 cut(s) 636
NciI CCSGG 1 cut(s) 1706
NcoI CCATGG 1 cut(s) 1538
NdeI CATATG 4 cut(s) 543, 778, 2269, 2339
NlaIV GGNNCC 5 cut(s) 1444, 1611, 2214, 2289, 2535
NmuCI GTSAC 2 cut(s) 1726, 2367
NspI RCATGY 5 cut(s) 922, 936, 1801, 2331, 2572
OliI CACNNNNGTG 2 cut(s) 53, 177
PaeI GCATGC 1 cut(s) 936
PagI TCATGA 1 cut(s) 193
PasI CCCWGGG 1 cut(s) 837
PceI AGGCCT 3 cut(s) 484, 583, 1354
PciI ACATGT 2 cut(s) 918, 2327
PcsI WCGNNNNNNNCGW 1 cut(s) 392
PctI GAATGC 2 cut(s) 361, 1039
PdmI GAANNNNTTC 3 cut(s) 1379, 1550, 1915
PfeI GAWTC 6 cut(s) 698, 1177, 1268, 1534, 1551, 2501
PflMI CCANNNNNTGG 3 cut(s) 808, 2027, 2297
Ple19I CGATCG 1 cut(s) 522
PleI GAGTC 4 cut(s) 366, 525, 836, 2374
PpsI GAGTC 4 cut(s) 366, 525, 836, 2374
PpuMI RGGWCCY 1 cut(s) 1399
PscI ACATGT 2 cut(s) 918, 2327
PshAI GACNNNNGTC 1 cut(s) 30
PsiI TTATAA 1 cut(s) 2165
Psp5II RGGWCCY 1 cut(s) 1399
Psp6I CCWGG 3 cut(s) 836, 1016, 1464
PspGI CCWGG 3 cut(s) 836, 1016, 1464
PspN4I GGNNCC 5 cut(s) 1444, 1611, 2214, 2289, 2535
PspPPI RGGWCCY 1 cut(s) 1399
PstI CTGCAG 1 cut(s) 1756
PstNI CAGNNNCTG 2 cut(s) 1718, 2297
PsuI RGATCY 3 cut(s) 1774, 2023, 2287
PvuI CGATCG 1 cut(s) 522
PvuII CAGCTG 3 cut(s) 551, 1091, 1751
RsaI GTAC 3 cut(s) 923, 2323, 2406
RsaNI GTAC 3 cut(s) 922, 2322, 2405
RseI CAYNNNNRTG 5 cut(s) 53, 174, 177, 777, 1662
SalI GTCGAC 1 cut(s) 62
SaqAI TTAA 8 cut(s) 143, 324, 492, 557, 1349, 1632, 1802, 2060
SchI GAGTC 4 cut(s) 366, 525, 836, 2375
ScrFI CCNGG 4 cut(s) 838, 1018, 1466, 1706
SduI GDGCHC 6 cut(s) 238, 295, 655, 730, 1623, 1997
SfaNI GCATC 8 cut(s) 353, 408, 447, 1348, 1451, 1718, 2077, 2657
SfcI CTRYAG 3 cut(s) 817, 1752, 2598
SinI GGWCC 7 cut(s) 611, 1298, 1399, 1429, 1896, 2534, 2582
SmiMI CAYNNNNRTG 5 cut(s) 53, 174, 177, 777, 1662
SmlI CTYRAG 4 cut(s) 1348, 1365, 1631, 2358
SmoI CTYRAG 4 cut(s) 1348, 1365, 1631, 2358
SpeI ACTAGT 1 cut(s) 2096
SphI GCATGC 1 cut(s) 936
SseBI AGGCCT 3 cut(s) 484, 583, 1354
SspI AATATT 1 cut(s) 331
SspMI CTAG 3 cut(s) 288, 1691, 2097
StuI AGGCCT 3 cut(s) 484, 583, 1354
StyD4I CCNGG 4 cut(s) 836, 1016, 1464, 1704
StyI CCWWGG 3 cut(s) 1538, 2187, 2216
TaaI ACNGT 6 cut(s) 32, 208, 233, 1587, 1939, 2307
TaiI ACGT 3 cut(s) 1212, 2140, 2551
TaqI TCGA 3 cut(s) 63, 119, 1271
TatI WGTACW 2 cut(s) 921, 2321
TauI GCSGC 1 cut(s) 2681
TfiI GAWTC 6 cut(s) 698, 1177, 1268, 1534, 1551, 2501
Tru1I TTAA 8 cut(s) 143, 324, 492, 557, 1349, 1632, 1802, 2060
Tru9I TTAA 8 cut(s) 143, 324, 492, 557, 1349, 1632, 1802, 2060
TscAI CASTG 6 cut(s) 211, 675, 792, 986, 1997, 2122
TseFI GTSAC 2 cut(s) 1726, 2367
Tsp45I GTSAC 2 cut(s) 1726, 2367
TspDTI ATGAA 9 cut(s) 202, 269, 288, 711, 761, 1289, 1468, 1488, 2517
TspGWI ACGGA 5 cut(s) 212, 401, 813, 1473, 2012
TspRI CASTG 6 cut(s) 211, 675, 792, 986, 1997, 2122
Van91I CCANNNNNTGG 3 cut(s) 808, 2027, 2297
Vha464I CTTAAG 2 cut(s) 1348, 1631
VneI GTGCAC 2 cut(s) 1619, 1993
VpaK11BI GGWCC 7 cut(s) 611, 1298, 1399, 1429, 1896, 2534, 2582
XapI RAATTY 1 cut(s) 1475
XceI RCATGY 5 cut(s) 922, 936, 1801, 2331, 2572
XcmI CCANNNNNNNNNTGG 3 cut(s) 179, 1051, 1867
XmiI GTMKAC 2 cut(s) 63, 1226
XmnI GAANNNNTTC 3 cut(s) 1379, 1550, 1915
XspI CTAG 3 cut(s) 288, 1691, 2097
ZraI GACGTC 1 cut(s) 1210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.