U-box domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G12000 AT5G12000 AT5G26150 AT5G26150 |
| fragaria_vesca | FvH4_2g31490 FvH4_2g31490 |
| malus_domestica | MD08G1065900.v1.1 MD15G1055500.v1.1 |
| prunus_persica | Prupe.1G408600_v2.0.a1 Prupe.1G408600_v2.0.a1 |
| pyrus_communis | pycom08g05450 |
| rosa_chinensis | RchiOBHm_Chr6g0311301 |
| rosa_laevigata | RLG00000010420 |
| rosa_multiflora | Rmu_co8488183.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00157780 |
| rosa_rugosa | Rorug06G0387100 Rorug06G0387100 Rorug06G0387100 |
| rosa_samantha | Rh6AG501900 Rh6BG512600 Rh6CG518300 Rh6DG504500 |
| rosa_wichuraiana | Rw6G043710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1016 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 811, 1601 |
| AccI | GTMKAC | 1 cut(s) | 63 |
| AccII | CGCG | 2 cut(s) | 20, 639 |
| AciI | CCGC | 6 cut(s) | 18, 35, 53, 469, 536, 1212 |
| AclWI | GGATC | 6 cut(s) | 191, 684, 715, 793, 1343, 1499 |
| AcoI | YGGCCR | 3 cut(s) | 3, 57, 90 |
| AcuI | CTGAAG | 3 cut(s) | 702, 768, 1305 |
| AfaI | GTAC | 1 cut(s) | 926 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 99, 224, 811, 1031, 1445, 1601 |
| AflII | CTTAAG | 1 cut(s) | 1205 |
| AflIII | ACRYGT | 1 cut(s) | 921 |
| AhlI | ACTAGT | 1 cut(s) | 1670 |
| AjiI | CACGTC | 1 cut(s) | 1712 |
| AjnI | CCWGG | 2 cut(s) | 839, 1038 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 71, 103 |
| AleI | CACNNNNGTG | 2 cut(s) | 53, 177 |
| AluBI | AGCT | 8 cut(s) | 551, 930, 947, 981, 1068, 1136, 1325, 1576 |
| AluI | AGCT | 8 cut(s) | 551, 930, 947, 981, 1068, 1136, 1325, 1576 |
| Alw21I | GWGCWC | 7 cut(s) | 238, 295, 658, 733, 1197, 1571, 1769 |
| Alw26I | GTCTC | 2 cut(s) | 1194, 1781 |
| Alw44I | GTGCAC | 2 cut(s) | 1193, 1567 |
| AlwI | GGATC | 6 cut(s) | 191, 684, 715, 793, 1343, 1499 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1292 |
| ApaLI | GTGCAC | 2 cut(s) | 1193, 1567 |
| ApeKI | GCWGC | 5 cut(s) | 500, 981, 1136, 1325, 1686 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1696, 1728 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1124, 1489 |
| AspLEI | GCGC | 1 cut(s) | 418 |
| AspS9I | GGNCC | 7 cut(s) | 102, 614, 767, 973, 1003, 1470, 1524 |
| AsuC2I | CCSGG | 1 cut(s) | 1280 |
| AsuHPI | GGTGA | 3 cut(s) | 161, 191, 1160 |
| AvaII | GGWCC | 4 cut(s) | 614, 973, 1003, 1470 |
| BaeGI | GKGCMC | 2 cut(s) | 1197, 1571 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BanI | GGYRCC | 1 cut(s) | 1016 |
| BbsI | GAAGAC | 2 cut(s) | 708, 792 |
| Bbv12I | GWGCWC | 7 cut(s) | 238, 295, 658, 733, 1197, 1571, 1769 |
| BbvI | GCAGC | 5 cut(s) | 487, 968, 1123, 1312, 1698 |
| BccI | CCATC | 4 cut(s) | 93, 170, 176, 1772 |
| BceAI | ACGGC | 4 cut(s) | 44, 66, 77, 489 |
| BciT130I | CCWGG | 2 cut(s) | 841, 1040 |
| BciVI | GTATCC | 2 cut(s) | 221, 1002 |
| BclI | TGATCA | 1 cut(s) | 109 |
| BcnI | CCSGG | 1 cut(s) | 1280 |
| BcoDI | GTCTC | 2 cut(s) | 1194, 1781 |
| BcuI | ACTAGT | 1 cut(s) | 1670 |
| BfaI | CTAG | 3 cut(s) | 288, 1265, 1671 |
| BfmI | CTRYAG | 2 cut(s) | 820, 1326 |
| BfrI | CTTAAG | 1 cut(s) | 1205 |
| BfuI | GTATCC | 2 cut(s) | 221, 1002 |
| BglII | AGATCT | 1 cut(s) | 1597 |
| BisI | GCNGC | 5 cut(s) | 501, 982, 1137, 1326, 1687 |
| BlsI | GCNGC | 5 cut(s) | 502, 983, 1138, 1327, 1688 |
| Bme1390I | CCNGG | 3 cut(s) | 841, 1040, 1280 |
| Bme18I | GGWCC | 4 cut(s) | 614, 973, 1003, 1470 |
| BmgBI | CACGTC | 1 cut(s) | 1712 |
| BmgT120I | GGNCC | 7 cut(s) | 102, 614, 767, 973, 1003, 1470, 1524 |
| BmiI | GGNNCC | 2 cut(s) | 1018, 1185 |
| BmrFI | CCNGG | 3 cut(s) | 841, 1040, 1280 |
| BmsI | GCATC | 6 cut(s) | 353, 408, 447, 1025, 1292, 1651 |
| BoxI | GACNNNNGTC | 1 cut(s) | 30 |
| BpiI | GAAGAC | 2 cut(s) | 708, 792 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 343, 375, 640, 672 |
| BpmI | CTGGAG | 1 cut(s) | 1403 |
| Bpu10I | CCTNAGC | 1 cut(s) | 977 |
| BpuMI | CCSGG | 1 cut(s) | 1280 |
| BsaBI | GATNNNNATC | 1 cut(s) | 195 |
| BsaI | GGTCTC | 1 cut(s) | 1194 |
| BsaJI | CCNNGG | 6 cut(s) | 48, 223, 839, 840, 1112, 1509 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 99, 224, 811, 1031, 1445, 1601 |
| Bse1I | ACTGG | 3 cut(s) | 678, 795, 1526 |
| Bse8I | GATNNNNATC | 1 cut(s) | 195 |
| BseBI | CCWGG | 2 cut(s) | 841, 1040 |
| BseDI | CCNNGG | 6 cut(s) | 48, 223, 839, 840, 1112, 1509 |
| BseGI | GGATG | 8 cut(s) | 264, 394, 775, 848, 1040, 1218, 1730, 1783 |
| BseJI | GATNNNNATC | 1 cut(s) | 195 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 99, 224, 811, 1031, 1445, 1601 |
| BseMII | CTCAG | 3 cut(s) | 966, 968, 1131 |
| BseNI | ACTGG | 3 cut(s) | 678, 795, 1526 |
| BseRI | GAGGAG | 2 cut(s) | 579, 664 |
| BseSI | GKGCMC | 2 cut(s) | 1197, 1571 |
| BseXI | GCAGC | 5 cut(s) | 487, 968, 1123, 1312, 1698 |
| BsgI | GTGCAG | 3 cut(s) | 486, 545, 846 |
| Bsh1236I | CGCG | 2 cut(s) | 20, 639 |
| Bsh1285I | CGRYCG | 1 cut(s) | 522 |
| BshNI | GGYRCC | 1 cut(s) | 1016 |
| BsiEI | CGRYCG | 1 cut(s) | 522 |
| BsiHKAI | GWGCWC | 7 cut(s) | 238, 295, 658, 733, 1197, 1571, 1769 |
| BsiSI | CCGG | 3 cut(s) | 1181, 1280, 1619 |
| BslFI | GGGAC | 3 cut(s) | 543, 857, 1262 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 99, 224, 811, 1031, 1445, 1601 |
| BsmAI | GTCTC | 2 cut(s) | 1194, 1781 |
| BsmFI | GGGAC | 3 cut(s) | 543, 857, 1262 |
| BsmI | GAATGC | 1 cut(s) | 361 |
| Bso31I | GGTCTC | 1 cut(s) | 1194 |
| Bsp1286I | GDGCHC | 7 cut(s) | 238, 295, 658, 733, 1197, 1571, 1769 |
| Bsp1407I | TGTACA | 1 cut(s) | 924 |
| Bsp19I | CCATGG | 1 cut(s) | 1112 |
| BspACI | CCGC | 6 cut(s) | 18, 35, 53, 469, 536, 1212 |
| BspCNI | CTCAG | 3 cut(s) | 965, 969, 1132 |
| BspFNI | CGCG | 2 cut(s) | 20, 639 |
| BspHI | TCATGA | 1 cut(s) | 193 |
| BspLI | GGNNCC | 2 cut(s) | 1018, 1185 |
| BspMAI | CTGCAG | 1 cut(s) | 1330 |
| BspPI | GGATC | 6 cut(s) | 191, 684, 715, 793, 1343, 1499 |
| BspT107I | GGYRCC | 1 cut(s) | 1016 |
| BspTI | CTTAAG | 1 cut(s) | 1205 |
| BspTNI | GGTCTC | 1 cut(s) | 1194 |
| BsrGI | TGTACA | 1 cut(s) | 924 |
| BsrI | ACTGG | 3 cut(s) | 678, 795, 1526 |
| BssECI | CCNNGG | 6 cut(s) | 48, 223, 839, 840, 1112, 1509 |
| BssT1I | CCWWGG | 1 cut(s) | 1112 |
| Bst2UI | CCWGG | 2 cut(s) | 841, 1040 |
| Bst4CI | ACNGT | 6 cut(s) | 32, 208, 233, 1161, 1513, 1792 |
| Bst6I | CTCTTC | 2 cut(s) | 1084, 1527 |
| BstAFI | CTTAAG | 1 cut(s) | 1205 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1289 |
| BstAUI | TGTACA | 1 cut(s) | 924 |
| BstC8I | GCNNGC | 8 cut(s) | 397, 549, 937, 1021, 1212, 1270, 1330, 1440 |
| BstDEI | CTNAG | 8 cut(s) | 477, 952, 977, 1069, 1140, 1225, 1273, 1577 |
| BstDSI | CCRYGG | 4 cut(s) | 48, 223, 1112, 1509 |
| BstF5I | GGATG | 8 cut(s) | 264, 394, 775, 848, 1040, 1218, 1730, 1783 |
| BstFNI | CGCG | 2 cut(s) | 20, 639 |
| BstHHI | GCGC | 1 cut(s) | 418 |
| BstMAI | GTCTC | 2 cut(s) | 1194, 1781 |
| BstMCI | CGRYCG | 1 cut(s) | 522 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 466, 544, 936, 953, 1269, 1289, 1439, 1522, 1556 |
| BstNI | CCWGG | 2 cut(s) | 841, 1040 |
| BstNSI | RCATGY | 3 cut(s) | 925, 939, 1375 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 30 |
| BstSCI | CCNGG | 3 cut(s) | 839, 1038, 1278 |
| BstSFI | CTRYAG | 2 cut(s) | 820, 1326 |
| BstSLI | GKGCMC | 2 cut(s) | 1197, 1571 |
| BstUI | CGCG | 2 cut(s) | 20, 639 |
| BstV1I | GCAGC | 5 cut(s) | 487, 968, 1123, 1312, 1698 |
| BstV2I | GAAGAC | 2 cut(s) | 708, 792 |
| BstX2I | RGATCY | 2 cut(s) | 1348, 1597 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 55, 1516 |
| BstYI | RGATCY | 2 cut(s) | 1348, 1597 |
| BsuI | GTATCC | 2 cut(s) | 221, 1002 |
| BtgI | CCRYGG | 4 cut(s) | 48, 223, 1112, 1509 |
| BtgZI | GCGATG | 1 cut(s) | 112 |
| BtrI | CACGTC | 1 cut(s) | 1712 |
| BtsCI | GGATG | 8 cut(s) | 264, 394, 775, 848, 1040, 1218, 1730, 1783 |
| BtsI | GCAGTG | 2 cut(s) | 1571, 1689 |
| BtsIMutI | CAGTG | 7 cut(s) | 204, 471, 671, 788, 1571, 1689, 1797 |
| Cac8I | GCNNGC | 8 cut(s) | 397, 549, 937, 1021, 1212, 1270, 1330, 1440 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1292 |
| CciI | TCATGA | 1 cut(s) | 193 |
| CfoI | GCGC | 1 cut(s) | 418 |
| Cfr13I | GGNCC | 7 cut(s) | 102, 614, 767, 973, 1003, 1470, 1524 |
| Csp6I | GTAC | 1 cut(s) | 925 |
| CviQI | GTAC | 1 cut(s) | 925 |
| DdeI | CTNAG | 8 cut(s) | 477, 952, 977, 1069, 1140, 1225, 1273, 1577 |
| EaeI | YGGCCR | 3 cut(s) | 3, 57, 90 |
| Eam1104I | CTCTTC | 2 cut(s) | 1084, 1527 |
| EarI | CTCTTC | 2 cut(s) | 1084, 1527 |
| EciI | GGCGGA | 1 cut(s) | 24 |
| Eco130I | CCWWGG | 1 cut(s) | 1112 |
| Eco147I | AGGCCT | 2 cut(s) | 484, 583 |
| Eco31I | GGTCTC | 1 cut(s) | 1194 |
| Eco47I | GGWCC | 4 cut(s) | 614, 973, 1003, 1470 |
| Eco57I | CTGAAG | 3 cut(s) | 702, 768, 1305 |
| EcoO109I | RGGNCCY | 1 cut(s) | 973 |
| EcoRII | CCWGG | 2 cut(s) | 839, 1038 |
| EcoT14I | CCWWGG | 1 cut(s) | 1112 |
| ErhI | CCWWGG | 1 cut(s) | 1112 |
| FaqI | GGGAC | 3 cut(s) | 543, 857, 1262 |
| FauI | CCCGC | 2 cut(s) | 543, 1219 |
| FauNDI | CATATG | 2 cut(s) | 543, 781 |
| FbaI | TGATCA | 1 cut(s) | 109 |
| FblI | GTMKAC | 1 cut(s) | 63 |
| Fnu4HI | GCNGC | 5 cut(s) | 501, 982, 1137, 1326, 1687 |
| FokI | GGATG | 8 cut(s) | 251, 401, 762, 835, 1047, 1205, 1717, 1790 |
| Fsp4HI | GCNGC | 5 cut(s) | 501, 982, 1137, 1326, 1687 |
| FspBI | CTAG | 3 cut(s) | 288, 1265, 1671 |
| GlaI | GCGC | 1 cut(s) | 417 |
| GluI | GCNGC | 5 cut(s) | 501, 982, 1137, 1326, 1687 |
| GsuI | CTGGAG | 1 cut(s) | 1403 |
| HapII | CCGG | 3 cut(s) | 1181, 1280, 1619 |
| HhaI | GCGC | 1 cut(s) | 418 |
| Hin6I | GCGC | 1 cut(s) | 416 |
| HinP1I | GCGC | 1 cut(s) | 416 |
| HincII | GTYRAC | 2 cut(s) | 64, 1377 |
| HindII | GTYRAC | 2 cut(s) | 64, 1377 |
| HindIII | AAGCTT | 1 cut(s) | 1066 |
| HinfI | GANTC | 5 cut(s) | 531, 701, 845, 1108, 1125 |
| HpaI | GTTAAC | 1 cut(s) | 1377 |
| HpaII | CCGG | 3 cut(s) | 1181, 1280, 1619 |
| HphI | GGTGA | 3 cut(s) | 161, 191, 1160 |
| Hpy166II | GTNNAC | 5 cut(s) | 64, 1195, 1377, 1569, 1709 |
| Hpy188I | TCNGA | 5 cut(s) | 669, 681, 1107, 1390, 1495 |
| Hpy8I | GTNNAC | 5 cut(s) | 64, 1195, 1377, 1569, 1709 |
| Hpy99I | CGWCG | 1 cut(s) | 65 |
| HpyAV | CCTTC | 1 cut(s) | 1725 |
| HpyCH4III | ACNGT | 6 cut(s) | 32, 208, 233, 1161, 1513, 1792 |
| HpyCH4IV | ACGT | 1 cut(s) | 1711 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 466, 544, 936, 953, 1269, 1289, 1439, 1522, 1556 |
| HpyF3I | CTNAG | 8 cut(s) | 477, 952, 977, 1069, 1140, 1225, 1273, 1577 |
| HpySE526I | ACGT | 1 cut(s) | 1711 |
| HspAI | GCGC | 1 cut(s) | 416 |
| Ksp22I | TGATCA | 1 cut(s) | 109 |
| KspAI | GTTAAC | 1 cut(s) | 1377 |
| LmnI | GCTCC | 2 cut(s) | 661, 1573 |
| Lsp1109I | GCAGC | 5 cut(s) | 487, 968, 1123, 1312, 1698 |
| LweI | GCATC | 6 cut(s) | 353, 408, 447, 1025, 1292, 1651 |
| MaeI | CTAG | 3 cut(s) | 288, 1265, 1671 |
| MaeII | ACGT | 1 cut(s) | 1711 |
| MaeIII | GTNAC | 3 cut(s) | 1094, 1300, 1340 |
| MboII | GAAGA | 9 cut(s) | 466, 708, 761, 792, 900, 1085, 1101, 1157, 1544 |
| MflI | RGATCY | 2 cut(s) | 1348, 1597 |
| MhlI | GDGCHC | 7 cut(s) | 238, 295, 658, 733, 1197, 1571, 1769 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 8 cut(s) | 13, 554, 736, 771, 902, 1248, 1552, 1720 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 2 cut(s) | 525, 839 |
| MmeI | TCCRAC | 2 cut(s) | 611, 683 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1124, 1489 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 8 cut(s) | 143, 324, 492, 557, 1206, 1376, 1634, 1754 |
| MslI | CAYNNNNRTG | 5 cut(s) | 53, 174, 177, 780, 1236 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 2 cut(s) | 551, 1325 |
| MspCI | CTTAAG | 1 cut(s) | 1205 |
| MspI | CCGG | 3 cut(s) | 1181, 1280, 1619 |
| MspR9I | CCNGG | 3 cut(s) | 841, 1040, 1280 |
| Mva1269I | GAATGC | 1 cut(s) | 361 |
| MvaI | CCWGG | 2 cut(s) | 841, 1040 |
| MvnI | CGCG | 2 cut(s) | 20, 639 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 466, 544, 936, 953, 1269, 1289, 1439, 1522, 1556 |
| NciI | CCSGG | 1 cut(s) | 1280 |
| NcoI | CCATGG | 1 cut(s) | 1112 |
| NdeI | CATATG | 2 cut(s) | 543, 781 |
| NlaIV | GGNNCC | 2 cut(s) | 1018, 1185 |
| NmuCI | GTSAC | 1 cut(s) | 1300 |
| NspI | RCATGY | 3 cut(s) | 925, 939, 1375 |
| OliI | CACNNNNGTG | 2 cut(s) | 53, 177 |
| PaeI | GCATGC | 1 cut(s) | 939 |
| PagI | TCATGA | 1 cut(s) | 193 |
| PasI | CCCWGGG | 1 cut(s) | 840 |
| PceI | AGGCCT | 2 cut(s) | 484, 583 |
| PciI | ACATGT | 1 cut(s) | 921 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 392 |
| PctI | GAATGC | 1 cut(s) | 361 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1124, 1489 |
| PfeI | GAWTC | 3 cut(s) | 701, 1108, 1125 |
| PflFI | GACNNNGTC | 1 cut(s) | 1792 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 811, 1601 |
| PkrI | GCNGC | 5 cut(s) | 502, 983, 1138, 1327, 1688 |
| Ple19I | CGATCG | 1 cut(s) | 522 |
| PleI | GAGTC | 2 cut(s) | 525, 839 |
| PpsI | GAGTC | 2 cut(s) | 525, 839 |
| PpuMI | RGGWCCY | 1 cut(s) | 973 |
| PscI | ACATGT | 1 cut(s) | 921 |
| PshAI | GACNNNNGTC | 1 cut(s) | 30 |
| Psp5II | RGGWCCY | 1 cut(s) | 973 |
| Psp6I | CCWGG | 2 cut(s) | 839, 1038 |
| PspGI | CCWGG | 2 cut(s) | 839, 1038 |
| PspN4I | GGNNCC | 2 cut(s) | 1018, 1185 |
| PspPI | GGNCC | 7 cut(s) | 102, 614, 767, 973, 1003, 1470, 1524 |
| PspPPI | RGGWCCY | 1 cut(s) | 973 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1720, 1752 |
| PstI | CTGCAG | 1 cut(s) | 1330 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1292 |
| PsuI | RGATCY | 2 cut(s) | 1348, 1597 |
| PsyI | GACNNNGTC | 1 cut(s) | 1792 |
| PvuI | CGATCG | 1 cut(s) | 522 |
| PvuII | CAGCTG | 2 cut(s) | 551, 1325 |
| RsaI | GTAC | 1 cut(s) | 926 |
| RsaNI | GTAC | 1 cut(s) | 925 |
| RseI | CAYNNNNRTG | 5 cut(s) | 53, 174, 177, 780, 1236 |
| SalI | GTCGAC | 1 cut(s) | 62 |
| SaqAI | TTAA | 8 cut(s) | 143, 324, 492, 557, 1206, 1376, 1634, 1754 |
| SatI | GCNGC | 5 cut(s) | 501, 982, 1137, 1326, 1687 |
| Sau96I | GGNCC | 7 cut(s) | 102, 614, 767, 973, 1003, 1470, 1524 |
| SchI | GAGTC | 2 cut(s) | 525, 839 |
| ScrFI | CCNGG | 3 cut(s) | 841, 1040, 1280 |
| SduI | GDGCHC | 7 cut(s) | 238, 295, 658, 733, 1197, 1571, 1769 |
| SfaNI | GCATC | 6 cut(s) | 353, 408, 447, 1025, 1292, 1651 |
| SfcI | CTRYAG | 2 cut(s) | 820, 1326 |
| SinI | GGWCC | 4 cut(s) | 614, 973, 1003, 1470 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 53, 174, 177, 780, 1236 |
| SmlI | CTYRAG | 1 cut(s) | 1205 |
| SmoI | CTYRAG | 1 cut(s) | 1205 |
| SpeI | ACTAGT | 1 cut(s) | 1670 |
| SphI | GCATGC | 1 cut(s) | 939 |
| Sse9I | AATT | 8 cut(s) | 13, 554, 736, 771, 902, 1248, 1552, 1720 |
| SseBI | AGGCCT | 2 cut(s) | 484, 583 |
| SsiI | CCGC | 6 cut(s) | 18, 35, 53, 469, 536, 1212 |
| SspI | AATATT | 1 cut(s) | 331 |
| SspMI | CTAG | 3 cut(s) | 288, 1265, 1671 |
| StuI | AGGCCT | 2 cut(s) | 484, 583 |
| StyD4I | CCNGG | 3 cut(s) | 839, 1038, 1278 |
| StyI | CCWWGG | 1 cut(s) | 1112 |
| TaaI | ACNGT | 6 cut(s) | 32, 208, 233, 1161, 1513, 1792 |
| TaiI | ACGT | 1 cut(s) | 1714 |
| TaqI | TCGA | 2 cut(s) | 63, 119 |
| TasI | AATT | 8 cut(s) | 13, 554, 736, 771, 902, 1248, 1552, 1720 |
| TatI | WGTACW | 1 cut(s) | 924 |
| TfiI | GAWTC | 3 cut(s) | 701, 1108, 1125 |
| Tru1I | TTAA | 8 cut(s) | 143, 324, 492, 557, 1206, 1376, 1634, 1754 |
| Tru9I | TTAA | 8 cut(s) | 143, 324, 492, 557, 1206, 1376, 1634, 1754 |
| TscAI | CASTG | 7 cut(s) | 211, 471, 678, 795, 1571, 1696, 1797 |
| TseFI | GTSAC | 1 cut(s) | 1300 |
| TseI | GCWGC | 5 cut(s) | 500, 981, 1136, 1325, 1686 |
| Tsp45I | GTSAC | 1 cut(s) | 1300 |
| TspDTI | ATGAA | 6 cut(s) | 202, 269, 288, 714, 764, 1062 |
| TspGWI | ACGGA | 5 cut(s) | 212, 401, 816, 1047, 1586 |
| TspRI | CASTG | 7 cut(s) | 211, 471, 678, 795, 1571, 1696, 1797 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1792 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 811, 1601 |
| Vha464I | CTTAAG | 1 cut(s) | 1205 |
| VneI | GTGCAC | 2 cut(s) | 1193, 1567 |
| VpaK11BI | GGWCC | 4 cut(s) | 614, 973, 1003, 1470 |
| XceI | RCATGY | 3 cut(s) | 925, 939, 1375 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 179, 1441 |
| XmiI | GTMKAC | 1 cut(s) | 63 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1124, 1489 |
| XspI | CTAG | 3 cut(s) | 288, 1265, 1671 |