DnaJ homolog subfamily B member
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0470721 |
| rosa_laevigata | RLG00000003989 RLG00000023028 RLG00000024339 |
| rosa_roxburghii | Rroxscaffold_7G00173190 |
| rosa_samantha | Rh3BG186600 Rh3CG176800 Rh4AG186800 Rh5AG240200 Rh5BG537500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 25 |
| BccI | CCATC | 1 cut(s) | 200 |
| BmsI | GCATC | 1 cut(s) | 189 |
| Bse1I | ACTGG | 1 cut(s) | 87 |
| BseGI | GGATG | 1 cut(s) | 204 |
| BseNI | ACTGG | 1 cut(s) | 87 |
| BsrI | ACTGG | 1 cut(s) | 87 |
| Bst4CI | ACNGT | 2 cut(s) | 181, 213 |
| BstC8I | GCNNGC | 2 cut(s) | 15, 135 |
| BstF5I | GGATG | 1 cut(s) | 204 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 130 |
| BstNSI | RCATGY | 1 cut(s) | 17 |
| BtsCI | GGATG | 1 cut(s) | 204 |
| BtsIMutI | CAGTG | 2 cut(s) | 94, 177 |
| Cac8I | GCNNGC | 2 cut(s) | 15, 135 |
| CviAII | CATG | 2 cut(s) | 14, 79 |
| CviJI | RGCY | 2 cut(s) | 102, 133 |
| CviKI_1 | RGCY | 2 cut(s) | 102, 133 |
| FaeI | CATG | 2 cut(s) | 17, 82 |
| FaiI | YATR | 7 cut(s) | 15, 50, 64, 80, 96, 122, 218 |
| FatI | CATG | 2 cut(s) | 13, 78 |
| FokI | GGATG | 1 cut(s) | 211 |
| Hin1II | CATG | 2 cut(s) | 17, 82 |
| Hpy166II | GTNNAC | 1 cut(s) | 84 |
| Hpy188I | TCNGA | 1 cut(s) | 149 |
| Hpy8I | GTNNAC | 1 cut(s) | 84 |
| HpyAV | CCTTC | 2 cut(s) | 19, 158 |
| HpyCH4III | ACNGT | 2 cut(s) | 181, 213 |
| HpyCH4V | TGCA | 6 cut(s) | 7, 13, 17, 62, 137, 202 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 130 |
| Hsp92II | CATG | 2 cut(s) | 17, 82 |
| LpnPI | CCDG | 2 cut(s) | 100, 115 |
| LweI | GCATC | 1 cut(s) | 189 |
| MaeIII | GTNAC | 1 cut(s) | 89 |
| MfeI | CAATTG | 1 cut(s) | 8 |
| MluCI | AATT | 1 cut(s) | 8 |
| MmeI | TCCRAC | 1 cut(s) | 61 |
| MnlI | CCTC | 3 cut(s) | 78, 143, 153 |
| MseI | TTAA | 1 cut(s) | 32 |
| MunI | CAATTG | 1 cut(s) | 8 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 130 |
| NlaIII | CATG | 2 cut(s) | 17, 82 |
| NmuCI | GTSAC | 1 cut(s) | 89 |
| NspI | RCATGY | 1 cut(s) | 17 |
| PaeI | GCATGC | 1 cut(s) | 17 |
| PflFI | GACNNNGTC | 1 cut(s) | 95 |
| PsyI | GACNNNGTC | 1 cut(s) | 95 |
| SaqAI | TTAA | 1 cut(s) | 32 |
| SetI | ASST | 1 cut(s) | 154 |
| SfaNI | GCATC | 1 cut(s) | 189 |
| SgeI | CNNG | 8 cut(s) | 26, 53, 83, 91, 99, 142, 146, 215 |
| SphI | GCATGC | 1 cut(s) | 17 |
| Sse9I | AATT | 1 cut(s) | 8 |
| SspI | AATATT | 1 cut(s) | 113 |
| TaaI | ACNGT | 2 cut(s) | 181, 213 |
| TasI | AATT | 1 cut(s) | 8 |
| Tru1I | TTAA | 1 cut(s) | 32 |
| Tru9I | TTAA | 1 cut(s) | 32 |
| TscAI | CASTG | 2 cut(s) | 94, 184 |
| TseFI | GTSAC | 1 cut(s) | 89 |
| Tsp45I | GTSAC | 1 cut(s) | 89 |
| TspDTI | ATGAA | 1 cut(s) | 67 |
| TspRI | CASTG | 2 cut(s) | 94, 184 |
| Tth111I | GACNNNGTC | 1 cut(s) | 95 |
| XceI | RCATGY | 1 cut(s) | 17 |