DnaJ homolog subfamily B member
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0470721 |
| rosa_laevigata | RLG00000003989 RLG00000023028 RLG00000024339 |
| rosa_roxburghii | Rroxscaffold_7G00173190 |
| rosa_samantha | Rh3BG186600 Rh3CG176800 Rh4AG186800 Rh5AG240200 Rh5BG537500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 52 |
| AluBI | AGCT | 1 cut(s) | 65 |
| AluI | AGCT | 1 cut(s) | 65 |
| Alw26I | GTCTC | 1 cut(s) | 115 |
| ApeKI | GCWGC | 1 cut(s) | 65 |
| ApoI | RAATTY | 1 cut(s) | 52 |
| BbvI | GCAGC | 1 cut(s) | 52 |
| BccI | CCATC | 1 cut(s) | 200 |
| BciVI | GTATCC | 1 cut(s) | 95 |
| BcoDI | GTCTC | 1 cut(s) | 115 |
| BfuI | GTATCC | 1 cut(s) | 95 |
| BisI | GCNGC | 1 cut(s) | 66 |
| BlsI | GCNGC | 1 cut(s) | 67 |
| BmsI | GCATC | 2 cut(s) | 31, 189 |
| BseGI | GGATG | 2 cut(s) | 22, 204 |
| BseRI | GAGGAG | 1 cut(s) | 25 |
| BseXI | GCAGC | 1 cut(s) | 52 |
| BsgI | GTGCAG | 1 cut(s) | 51 |
| BsmAI | GTCTC | 1 cut(s) | 115 |
| Bst4CI | ACNGT | 1 cut(s) | 181 |
| BstF5I | GGATG | 2 cut(s) | 22, 204 |
| BstMAI | GTCTC | 1 cut(s) | 115 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 19 |
| BstV1I | GCAGC | 1 cut(s) | 52 |
| BsuI | GTATCC | 1 cut(s) | 95 |
| BtsCI | GGATG | 2 cut(s) | 22, 204 |
| BtsIMutI | CAGTG | 1 cut(s) | 177 |
| CviAII | CATG | 1 cut(s) | 14 |
| CviJI | RGCY | 3 cut(s) | 65, 82, 110 |
| CviKI_1 | RGCY | 3 cut(s) | 65, 82, 110 |
| EcoRI | GAATTC | 1 cut(s) | 52 |
| FaeI | CATG | 1 cut(s) | 17 |
| FaiI | YATR | 5 cut(s) | 15, 72, 86, 127, 218 |
| FatI | CATG | 1 cut(s) | 13 |
| Fnu4HI | GCNGC | 1 cut(s) | 66 |
| FokI | GGATG | 2 cut(s) | 9, 211 |
| Fsp4HI | GCNGC | 1 cut(s) | 66 |
| GluI | GCNGC | 1 cut(s) | 66 |
| Hin1II | CATG | 1 cut(s) | 17 |
| Hpy188I | TCNGA | 3 cut(s) | 51, 58, 149 |
| Hpy188III | TCNNGA | 1 cut(s) | 41 |
| HpyAV | CCTTC | 1 cut(s) | 158 |
| HpyCH4III | ACNGT | 1 cut(s) | 181 |
| HpyCH4V | TGCA | 5 cut(s) | 7, 13, 68, 137, 202 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 19 |
| Hsp92II | CATG | 1 cut(s) | 17 |
| LpnPI | CCDG | 2 cut(s) | 102, 115 |
| Lsp1109I | GCAGC | 1 cut(s) | 52 |
| LweI | GCATC | 2 cut(s) | 31, 189 |
| MluCI | AATT | 2 cut(s) | 52, 212 |
| MnlI | CCTC | 4 cut(s) | 38, 46, 143, 153 |
| MseI | TTAA | 1 cut(s) | 75 |
| MslI | CAYNNNNRTG | 1 cut(s) | 12 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 19 |
| NlaIII | CATG | 1 cut(s) | 17 |
| PkrI | GCNGC | 1 cut(s) | 67 |
| RseI | CAYNNNNRTG | 1 cut(s) | 12 |
| SaqAI | TTAA | 1 cut(s) | 75 |
| SatI | GCNGC | 1 cut(s) | 66 |
| SetI | ASST | 2 cut(s) | 67, 154 |
| SfaNI | GCATC | 2 cut(s) | 31, 189 |
| SgeI | CNNG | 7 cut(s) | 26, 53, 101, 118, 128, 142, 215 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 12 |
| Sse9I | AATT | 2 cut(s) | 52, 212 |
| TaaI | ACNGT | 1 cut(s) | 181 |
| TaqI | TCGA | 1 cut(s) | 42 |
| TasI | AATT | 2 cut(s) | 52, 212 |
| Tru1I | TTAA | 1 cut(s) | 75 |
| Tru9I | TTAA | 1 cut(s) | 75 |
| TscAI | CASTG | 1 cut(s) | 184 |
| TseI | GCWGC | 1 cut(s) | 65 |
| TspRI | CASTG | 1 cut(s) | 184 |
| XapI | RAATTY | 1 cut(s) | 52 |