Photosystem II (PSII) is a light-driven water plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1 D2 (PsbA PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATCG00280 |
| rosa_laevigata | RLG00000022754 |
| rosa_multiflora | Rmu_sc0006153.1_g000042 |
| rosa_roxburghii | Rroxscaffold_7G00181930 |
| rosa_rugosa | RorugMtG0000600 |
| rosa_samantha | Rh1BG017200 Rh5AG281200 Rh7DG262700 |
| rosa_wichuraiana | Rw0G001310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 108 |
| AciI | CCGC | 2 cut(s) | 65, 83 |
| AgsI | TTSAA | 3 cut(s) | 77, 161, 242 |
| AluBI | AGCT | 3 cut(s) | 157, 164, 233 |
| AluI | AGCT | 3 cut(s) | 157, 164, 233 |
| ApeKI | GCWGC | 2 cut(s) | 164, 167 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 138 |
| AsuHPI | GGTGA | 1 cut(s) | 79 |
| AsuII | TTCGAA | 1 cut(s) | 20 |
| BbvI | GCAGC | 2 cut(s) | 151, 179 |
| BccI | CCATC | 1 cut(s) | 145 |
| BfaI | CTAG | 1 cut(s) | 47 |
| BfmI | CTRYAG | 1 cut(s) | 165 |
| BglII | AGATCT | 1 cut(s) | 88 |
| BisI | GCNGC | 2 cut(s) | 165, 168 |
| BlsI | GCNGC | 2 cut(s) | 166, 169 |
| Bpu14I | TTCGAA | 1 cut(s) | 20 |
| BseGI | GGATG | 2 cut(s) | 31, 156 |
| BseXI | GCAGC | 2 cut(s) | 151, 179 |
| BsmI | GAATGC | 1 cut(s) | 204 |
| Bsp119I | TTCGAA | 1 cut(s) | 20 |
| Bsp143I | GATC | 1 cut(s) | 88 |
| BspACI | CCGC | 2 cut(s) | 65, 83 |
| BspMAI | CTGCAG | 1 cut(s) | 169 |
| BspT104I | TTCGAA | 1 cut(s) | 20 |
| BssMI | GATC | 1 cut(s) | 88 |
| Bst4CI | ACNGT | 1 cut(s) | 218 |
| BstBI | TTCGAA | 1 cut(s) | 20 |
| BstF5I | GGATG | 2 cut(s) | 31, 156 |
| BstKTI | GATC | 1 cut(s) | 91 |
| BstMBI | GATC | 1 cut(s) | 88 |
| BstSFI | CTRYAG | 1 cut(s) | 165 |
| BstV1I | GCAGC | 2 cut(s) | 151, 179 |
| BstX2I | RGATCY | 1 cut(s) | 88 |
| BstYI | RGATCY | 1 cut(s) | 88 |
| BtsCI | GGATG | 2 cut(s) | 31, 156 |
| CviAII | CATG | 2 cut(s) | 10, 212 |
| CviJI | RGCY | 4 cut(s) | 157, 164, 170, 233 |
| CviKI_1 | RGCY | 4 cut(s) | 157, 164, 170, 233 |
| DpnI | GATC | 1 cut(s) | 90 |
| DpnII | GATC | 1 cut(s) | 88 |
| FaeI | CATG | 2 cut(s) | 13, 215 |
| FaiI | YATR | 3 cut(s) | 11, 213, 226 |
| FatI | CATG | 2 cut(s) | 9, 211 |
| FblI | GTMKAC | 1 cut(s) | 108 |
| Fnu4HI | GCNGC | 2 cut(s) | 165, 168 |
| FokI | GGATG | 2 cut(s) | 38, 163 |
| Fsp4HI | GCNGC | 2 cut(s) | 165, 168 |
| FspBI | CTAG | 1 cut(s) | 47 |
| GluI | GCNGC | 2 cut(s) | 165, 168 |
| Hin1II | CATG | 2 cut(s) | 13, 215 |
| HindIII | AAGCTT | 1 cut(s) | 231 |
| HinfI | GANTC | 2 cut(s) | 101, 185 |
| HphI | GGTGA | 1 cut(s) | 79 |
| Hpy166II | GTNNAC | 1 cut(s) | 109 |
| Hpy8I | GTNNAC | 1 cut(s) | 109 |
| HpyAV | CCTTC | 2 cut(s) | 16, 128 |
| HpyCH4III | ACNGT | 1 cut(s) | 218 |
| HpyCH4V | TGCA | 1 cut(s) | 167 |
| Hsp92II | CATG | 2 cut(s) | 13, 215 |
| Kzo9I | GATC | 1 cut(s) | 88 |
| LmnI | GCTCC | 2 cut(s) | 154, 207 |
| Lsp1109I | GCAGC | 2 cut(s) | 151, 179 |
| MaeI | CTAG | 1 cut(s) | 47 |
| MalI | GATC | 1 cut(s) | 90 |
| MboI | GATC | 1 cut(s) | 88 |
| MboII | GAAGA | 2 cut(s) | 98, 213 |
| MflI | RGATCY | 1 cut(s) | 88 |
| MlyI | GAGTC | 1 cut(s) | 110 |
| MroXI | GAANNNNTTC | 1 cut(s) | 138 |
| MseI | TTAA | 2 cut(s) | 128, 207 |
| Mva1269I | GAATGC | 1 cut(s) | 204 |
| NdeII | GATC | 1 cut(s) | 88 |
| NlaIII | CATG | 2 cut(s) | 13, 215 |
| NspV | TTCGAA | 1 cut(s) | 20 |
| PctI | GAATGC | 1 cut(s) | 204 |
| PdmI | GAANNNNTTC | 1 cut(s) | 138 |
| PfeI | GAWTC | 1 cut(s) | 185 |
| PkrI | GCNGC | 2 cut(s) | 166, 169 |
| PleI | GAGTC | 1 cut(s) | 109 |
| PpsI | GAGTC | 1 cut(s) | 109 |
| PstI | CTGCAG | 1 cut(s) | 169 |
| PsuI | RGATCY | 1 cut(s) | 88 |
| SaqAI | TTAA | 2 cut(s) | 128, 207 |
| SatI | GCNGC | 2 cut(s) | 165, 168 |
| Sau3AI | GATC | 1 cut(s) | 88 |
| SchI | GAGTC | 1 cut(s) | 110 |
| SetI | ASST | 4 cut(s) | 139, 159, 166, 235 |
| SfcI | CTRYAG | 1 cut(s) | 165 |
| SfuI | TTCGAA | 1 cut(s) | 20 |
| SgeI | CNNG | 9 cut(s) | 22, 59, 74, 104, 155, 159, 173, 184, 224 |
| SsiI | CCGC | 2 cut(s) | 65, 83 |
| SspI | AATATT | 1 cut(s) | 121 |
| SspMI | CTAG | 1 cut(s) | 47 |
| TaaI | ACNGT | 1 cut(s) | 218 |
| TaqI | TCGA | 1 cut(s) | 20 |
| TfiI | GAWTC | 1 cut(s) | 185 |
| Tru1I | TTAA | 2 cut(s) | 128, 207 |
| Tru9I | TTAA | 2 cut(s) | 128, 207 |
| TseI | GCWGC | 2 cut(s) | 164, 167 |
| TspDTI | ATGAA | 2 cut(s) | 51, 213 |
| TspGWI | ACGGA | 1 cut(s) | 94 |
| XmiI | GTMKAC | 1 cut(s) | 108 |
| XmnI | GAANNNNTTC | 1 cut(s) | 138 |
| XspI | CTAG | 1 cut(s) | 47 |