No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATCG00280 |
| rosa_laevigata | RLG00000022754 |
| rosa_multiflora | Rmu_sc0006153.1_g000042 |
| rosa_roxburghii | Rroxscaffold_7G00181930 |
| rosa_rugosa | RorugMtG0000600 |
| rosa_samantha | Rh1BG017200 Rh5AG281200 Rh7DG262700 |
| rosa_wichuraiana | Rw0G001310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 183 |
| AccII | CGCG | 1 cut(s) | 67 |
| AciI | CCGC | 1 cut(s) | 161 |
| AfaI | GTAC | 1 cut(s) | 94 |
| AflIII | ACRYGT | 1 cut(s) | 65 |
| AgsI | TTSAA | 1 cut(s) | 51 |
| AjnI | CCWGG | 1 cut(s) | 237 |
| AluBI | AGCT | 1 cut(s) | 119 |
| AluI | AGCT | 1 cut(s) | 119 |
| Alw26I | GTCTC | 1 cut(s) | 152 |
| ApeKI | GCWGC | 1 cut(s) | 83 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 150, 182, 260, 292 |
| AspS9I | GGNCC | 2 cut(s) | 158, 242 |
| AsuHPI | GGTGA | 3 cut(s) | 14, 125, 142 |
| AvaII | GGWCC | 2 cut(s) | 158, 242 |
| AxyI | CCTNAGG | 1 cut(s) | 29 |
| BanI | GGYRCC | 1 cut(s) | 183 |
| BbvI | GCAGC | 1 cut(s) | 95 |
| BccI | CCATC | 3 cut(s) | 9, 53, 131 |
| BciT130I | CCWGG | 1 cut(s) | 239 |
| BcoDI | GTCTC | 1 cut(s) | 152 |
| BisI | GCNGC | 1 cut(s) | 84 |
| BlsI | GCNGC | 1 cut(s) | 85 |
| Bme1390I | CCNGG | 1 cut(s) | 239 |
| Bme18I | GGWCC | 2 cut(s) | 158, 242 |
| BmgT120I | GGNCC | 2 cut(s) | 158, 242 |
| BmiI | GGNNCC | 2 cut(s) | 185, 243 |
| BmrFI | CCNGG | 1 cut(s) | 239 |
| BsaI | GGTCTC | 1 cut(s) | 152 |
| BsaJI | CCNNGG | 1 cut(s) | 238 |
| Bse1I | ACTGG | 1 cut(s) | 107 |
| Bse21I | CCTNAGG | 1 cut(s) | 29 |
| BseBI | CCWGG | 1 cut(s) | 239 |
| BseDI | CCNNGG | 1 cut(s) | 238 |
| BseGI | GGATG | 3 cut(s) | 20, 64, 123 |
| BseNI | ACTGG | 1 cut(s) | 107 |
| BseXI | GCAGC | 1 cut(s) | 95 |
| Bsh1236I | CGCG | 1 cut(s) | 67 |
| BshNI | GGYRCC | 1 cut(s) | 183 |
| BsmAI | GTCTC | 1 cut(s) | 152 |
| Bso31I | GGTCTC | 1 cut(s) | 152 |
| Bsp143I | GATC | 1 cut(s) | 227 |
| BspACI | CCGC | 1 cut(s) | 161 |
| BspFNI | CGCG | 1 cut(s) | 67 |
| BspLI | GGNNCC | 2 cut(s) | 185, 243 |
| BspT107I | GGYRCC | 1 cut(s) | 183 |
| BspTNI | GGTCTC | 1 cut(s) | 152 |
| BsrI | ACTGG | 1 cut(s) | 107 |
| BssECI | CCNNGG | 1 cut(s) | 238 |
| BssMI | GATC | 1 cut(s) | 227 |
| Bst2UI | CCWGG | 1 cut(s) | 239 |
| Bst6I | CTCTTC | 1 cut(s) | 52 |
| BstC8I | GCNNGC | 1 cut(s) | 42 |
| BstDEI | CTNAG | 4 cut(s) | 29, 206, 257, 311 |
| BstF5I | GGATG | 3 cut(s) | 20, 64, 123 |
| BstFNI | CGCG | 1 cut(s) | 67 |
| BstKTI | GATC | 1 cut(s) | 230 |
| BstMAI | GTCTC | 1 cut(s) | 152 |
| BstMBI | GATC | 1 cut(s) | 227 |
| BstNI | CCWGG | 1 cut(s) | 239 |
| BstSCI | CCNGG | 1 cut(s) | 237 |
| BstUI | CGCG | 1 cut(s) | 67 |
| BstV1I | GCAGC | 1 cut(s) | 95 |
| Bsu36I | CCTNAGG | 1 cut(s) | 29 |
| BtsCI | GGATG | 3 cut(s) | 20, 64, 123 |
| Cac8I | GCNNGC | 1 cut(s) | 42 |
| Cfr13I | GGNCC | 2 cut(s) | 158, 242 |
| CpoI | CGGWCCG | 1 cut(s) | 158 |
| Csp6I | GTAC | 1 cut(s) | 93 |
| CspI | CGGWCCG | 1 cut(s) | 158 |
| CviJI | RGCY | 5 cut(s) | 44, 86, 119, 174, 282 |
| CviKI_1 | RGCY | 5 cut(s) | 44, 86, 119, 174, 282 |
| CviQI | GTAC | 1 cut(s) | 93 |
| DdeI | CTNAG | 4 cut(s) | 29, 206, 257, 311 |
| DpnI | GATC | 1 cut(s) | 229 |
| DpnII | GATC | 1 cut(s) | 227 |
| Eam1104I | CTCTTC | 1 cut(s) | 52 |
| EarI | CTCTTC | 1 cut(s) | 52 |
| Eco31I | GGTCTC | 1 cut(s) | 152 |
| Eco47I | GGWCC | 2 cut(s) | 158, 242 |
| Eco81I | CCTNAGG | 1 cut(s) | 29 |
| EcoRII | CCWGG | 1 cut(s) | 237 |
| FaiI | YATR | 1 cut(s) | 179 |
| Fnu4HI | GCNGC | 1 cut(s) | 84 |
| FokI | GGATG | 3 cut(s) | 27, 71, 110 |
| Fsp4HI | GCNGC | 1 cut(s) | 84 |
| GluI | GCNGC | 1 cut(s) | 84 |
| HinfI | GANTC | 2 cut(s) | 19, 34 |
| HphI | GGTGA | 3 cut(s) | 14, 125, 142 |
| Hpy188III | TCNNGA | 1 cut(s) | 225 |
| HpyAV | CCTTC | 2 cut(s) | 138, 255 |
| HpyCH4V | TGCA | 1 cut(s) | 40 |
| HpyF3I | CTNAG | 4 cut(s) | 29, 206, 257, 311 |
| Kzo9I | GATC | 1 cut(s) | 227 |
| LpnPI | CCDG | 5 cut(s) | 81, 120, 224, 251, 299 |
| Lsp1109I | GCAGC | 1 cut(s) | 95 |
| MaeIII | GTNAC | 2 cut(s) | 20, 291 |
| MalI | GATC | 1 cut(s) | 229 |
| MboI | GATC | 1 cut(s) | 227 |
| MboII | GAAGA | 4 cut(s) | 16, 39, 222, 242 |
| MluCI | AATT | 2 cut(s) | 7, 246 |
| MluI | ACGCGT | 1 cut(s) | 65 |
| MlyI | GAGTC | 2 cut(s) | 28, 43 |
| MnlI | CCTC | 5 cut(s) | 35, 55, 211, 293, 308 |
| MseI | TTAA | 1 cut(s) | 194 |
| MspR9I | CCNGG | 1 cut(s) | 239 |
| MvaI | CCWGG | 1 cut(s) | 239 |
| MvnI | CGCG | 1 cut(s) | 67 |
| NdeII | GATC | 1 cut(s) | 227 |
| NlaIV | GGNNCC | 2 cut(s) | 185, 243 |
| NmuCI | GTSAC | 1 cut(s) | 20 |
| PkrI | GCNGC | 1 cut(s) | 85 |
| PleI | GAGTC | 2 cut(s) | 27, 42 |
| PpsI | GAGTC | 2 cut(s) | 27, 42 |
| Psp6I | CCWGG | 1 cut(s) | 237 |
| PspGI | CCWGG | 1 cut(s) | 237 |
| PspN4I | GGNNCC | 2 cut(s) | 185, 243 |
| PspPI | GGNCC | 2 cut(s) | 158, 242 |
| RsaI | GTAC | 1 cut(s) | 94 |
| RsaNI | GTAC | 1 cut(s) | 93 |
| Rsr2I | CGGWCCG | 1 cut(s) | 158 |
| RsrII | CGGWCCG | 1 cut(s) | 158 |
| SaqAI | TTAA | 1 cut(s) | 194 |
| SatI | GCNGC | 1 cut(s) | 84 |
| Sau3AI | GATC | 1 cut(s) | 227 |
| Sau96I | GGNCC | 2 cut(s) | 158, 242 |
| SchI | GAGTC | 2 cut(s) | 28, 43 |
| ScrFI | CCNGG | 1 cut(s) | 239 |
| SetI | ASST | 6 cut(s) | 27, 121, 148, 155, 319, 329 |
| SinI | GGWCC | 2 cut(s) | 158, 242 |
| Sse9I | AATT | 2 cut(s) | 7, 246 |
| SsiI | CCGC | 1 cut(s) | 161 |
| StyD4I | CCNGG | 1 cut(s) | 237 |
| TasI | AATT | 2 cut(s) | 7, 246 |
| TatI | WGTACW | 1 cut(s) | 92 |
| Tru1I | TTAA | 1 cut(s) | 194 |
| Tru9I | TTAA | 1 cut(s) | 194 |
| TseFI | GTSAC | 1 cut(s) | 20 |
| TseI | GCWGC | 1 cut(s) | 83 |
| Tsp45I | GTSAC | 1 cut(s) | 20 |
| TspDTI | ATGAA | 2 cut(s) | 17, 248 |
| TspGWI | ACGGA | 2 cut(s) | 27, 171 |
| VpaK11BI | GGWCC | 2 cut(s) | 158, 242 |