Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0012712

Physical Location & Seq

Genomic Coordinates Reverse (-)

52541367 .. 52545264

Gene Structure 3898 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00203640.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2178 bp

ATGGCGCCTTCATCTAATGATTCGTCATCATCAAATTCTAAACAATCCTCATCAACTTCTCCATCATCATCATCGTCATCTTCGAGCTCAAACTCTACACCATCTAATCAAGGGAATGGTAACTCTGAAGGCAACAATAACAATTCTGGAGGTAATAGCAATAACAATTCTGGAGGAAACAACAACAATAACAACAACAATTCTAGTGGGAACAACAATGGAAACGACAACTCTAGTGGGAATGGTAACTCTGGAGACAACAATGGGAGCAAAGATTCAAGTGGGAAAAACAATTCGAGCGGGAACAACAATTCTGGGCAGAACAACAACAACAATTCTGGTCAGAACAACAACAACAATTCTGGACAGAATGACAATAACAATTCTGGACAGAGCAACAATTCTGGTCAGAATGGCAACAACAATTCTGGGCAAAATGGCAACAACAATTCTGGGCAAAATGGCAATAGCAACTCTGGACAAAACAACAACAACAACAACAGCCAGAACAACAATGGCAACCAAAATAACAACGGCAACCAGAACAAAAACAACTCTGGACAAAACAACAACAACAATGGCGGGAATGGTAACTCTCAATCATCCCAAGGGAATCATCCACCACCACCACCACCACCACCCAAATCGCCCAACAATTATTGGCATGCACCTCCACCACCGTCAAAAAAGTCCCCTCCAGCACCACCAGCTCTATCTAATACAGACAATAAATCATCGTCCAGCTCACCTTCCTCACCACTCATAATAGGACTTGCAGCTGGAGCAGGGCTGTTGTTTGTCCTGGTTTTGCTCTTTTTGGCATGTTCTAGAAGGAGGAAGAAGCGACAGTCCTCACACCTCATGGATAACCCTGATCCTTATCGTCCTAATGGAAGTGAATACTGGCAAAGTGGAGCGTACAAACCCAATGAGCACGTTATGAACATGCCTCCACCTTCTGCATTATCTGGTTGGACTAACACAGGAGCGCATCAGCCACCCATGATTAGCAGCGAGATGAACTCCTCCAACTTCTCAGGCCCTCATGGCCCTTTACAACCCCCTCCACACCCTTCAGTGGCTCTTGGATTCAACACGAGCACTTTCACATATGATGACTTAGCAGTTGCGACTTCAGGGTTCTCCCAGGCCAAATTGTTGGGTCAAGGTGGGTTCGGGTTTGTGCACAAAGGGGTGCTGCCAAATGGTAAAGAAATTGCTGTGAAAAGTCTCAAAGCAGGAAGTGGCCAAGGAGACCGAGAATTCGCAGCAGAGGTTGAGATTATTAGCCGTGTCCATCACCGCCACCTTGTCTCGCTTGTGGGATATTGCCTTAACGGAGACCGAAAATTGTTGGTTTATGAGTTTGTTCCAAATAACACCCTTGAGTTCCACCTTCATAATAAGAATCGTCCACCATTGGACTGGGCCTCGAGGGTCAAGATTGCATTGGGATCTGCTAAAGGGCTTGCTTACTTGCACGAAGATTGTCATCCAAAGATCATCCATCGTGACATTAAAGCAGCAAATATTTTAATTGACCATCACTTTGAAGCTAAGGTGGCAGATTTTGGGCTAGCAAAGCTAAACCAAGAAAACGTTACTCATGTGTCTACTCGTGTCATGGGGACATTCGGGTACTTGGCTCCTGAATACGCATCGAGTGGCAAGTTGACTGAGAAGTCTGATGTTTTCTCATTTGGTATCATGCTTCTCGAGCTGATTACTGGACGACGTCCAGTGGACACCACTGGAGAATATGAGGAGGACACCTTAGTAGACTGGGCTAGGCCTTTGCTATTGAAAGCAATAGAGGATGGGAACTACAGTGAGTTAGCTGATCCACGACTAGAAAATAAGTATGATCAGGAAGAGATTGCACGCATGGTTGCATGTGCGTCAACAAGCGTTCGGCATTCTGCAAAAAAGCGACCCAAAATGAGCCAGATTGTACGAGCACTAGAAGGAGATGTGTCGCTAGAGGACTTGCATGAAGGAATAAAACCTAGTCCCAGCGCTTTATTTGGTGGCTCTAATACTAGTTCTGAGTTTGATTCCGACTCATATAATGCTAACATGAAGAATTTTAGAAAGACGACATTGGGGGAAAGCCAAGACTATCCAAGCAGCGAATATGGGAACACCTCTAATAGCGAAGAGATGGTCAAGAAGGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 ko05169 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164 map05169

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

725

Amino Acids

77.19

Weight (kDa)

6.73

Isoelectric Point (pI)

46.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	382 - 587	9.6e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	384 - 654	3.4e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012712)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49270 AT3G18810 AT4G34440 AT4G34440
fragaria_vesca	FvH4_2g08640
malus_domestica	MD05G1067600.v1.1 MD10G1077600.v1.1
prunus_persica	Prupe.8G098300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0264041
rosa_laevigata	RLG00000014294
rosa_roxburghii	Rroxscaffold_176G00431380 Rroxscaffold_7G00203640
rosa_rugosa	Rorug06G0007400 Rorug06G0007500
rosa_samantha	Rh6AG128700 Rh6CG123900 Rh6DG110700
rosa_wichuraiana	Rw6G011120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1681
AatII	GACGTC	1 cut(s)	1738
AbsI	CCTCGAGG	1 cut(s)	1432
AccB1I	GGYRCC	1 cut(s)	4
AccBSI	CCGCTC	1 cut(s)	300
AccI	GTMKAC	2 cut(s)	1613, 1779
AciI	CCGC	3 cut(s)	300, 582, 1303
AclI	AACGTT	1 cut(s)	1599
AclWI	GGATC	3 cut(s)	869, 1462, 1835
AcoI	YGGCCR	1 cut(s)	1246
AcsI	RAATTY	3 cut(s)	34, 1262, 2083
AcuI	CTGAAG	3 cut(s)	147, 1059, 1119
AcyI	GRCGYC	2 cut(s)	5, 1735
AfaI	GTAC	3 cut(s)	920, 1640, 1953
AfeI	AGCGCT	1 cut(s)	2017
AfiI	CCNNNNNNNGG	1 cut(s)	1078
AgsI	TTSAA	4 cut(s)	279, 1093, 1553, 1804
AhlI	ACTAGT	1 cut(s)	2039
AjnI	CCWGG	2 cut(s)	801, 1146
AluBI	AGCT	8 cut(s)	87, 710, 744, 779, 1556, 1585, 1720, 1838
AluI	AGCT	8 cut(s)	87, 710, 744, 779, 1556, 1585, 1720, 1838
Alw21I	GWGCWC	5 cut(s)	89, 936, 1103, 1188, 1960
Alw26I	GTCTC	5 cut(s)	249, 1235, 1248, 1318, 1335
Alw44I	GTGCAC	1 cut(s)	1184
AlwI	GGATC	3 cut(s)	869, 1462, 1835
Ama87I	CYCGRG	2 cut(s)	1432, 1715
Aor51HI	AGCGCT	1 cut(s)	2017
AoxI	GGCC	6 cut(s)	1039, 1048, 1149, 1246, 1428, 1790
ApaLI	GTGCAC	1 cut(s)	1184
ApeKI	GCWGC	6 cut(s)	776, 1011, 1198, 1268, 1523, 2127
ApoI	RAATTY	3 cut(s)	34, 1262, 2083
ArsI	GACNNNNNNTTYG	5 cut(s)	1247, 1279, 1532, 1564, 2148
AspLEI	GCGC	3 cut(s)	7, 991, 2018
AspS9I	GGNCC	3 cut(s)	1040, 1049, 1428
AsuHPI	GGTGA	3 cut(s)	738, 747, 1292
AsuNHI	GCTAGC	1 cut(s)	1576
AvaI	CYCGRG	2 cut(s)	1432, 1715
BaeGI	GKGCMC	1 cut(s)	1188
BalI	TGGCCA	1 cut(s)	1248
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	1 cut(s)	89
BauI	CACGAG	2 cut(s)	1096, 1617
Bbv12I	GWGCWC	5 cut(s)	89, 936, 1103, 1188, 1960
BbvI	GCAGC	6 cut(s)	788, 1023, 1185, 1280, 1535, 2139
BccI	CCATC	7 cut(s)	70, 109, 1305, 1515, 1551, 1811, 2155
BceAI	ACGGC	2 cut(s)	550, 1275
BciT130I	CCWGG	2 cut(s)	803, 1148
BclI	TGATCA	1 cut(s)	1864
BcoDI	GTCTC	5 cut(s)	249, 1235, 1248, 1318, 1335
BcuI	ACTAGT	1 cut(s)	2039
BfmI	CTRYAG	1 cut(s)	1825
BfoI	RGCGCY	2 cut(s)	8, 2019
BglI	GCCNNNNNGGC	1 cut(s)	1047
BisI	GCNGC	6 cut(s)	777, 1012, 1199, 1269, 1524, 2128
BlsI	GCNGC	6 cut(s)	778, 1013, 1200, 1270, 1525, 2129
Bme1390I	CCNGG	2 cut(s)	803, 1148
BmeT110I	CYCGRG	2 cut(s)	1432, 1715
BmgT120I	GGNCC	3 cut(s)	1040, 1049, 1428
BmiI	GGNNCC	2 cut(s)	6, 1647
BmrFI	CCNGG	2 cut(s)	803, 1148
BmrI	ACTGGG	2 cut(s)	1435, 1792
BmsI	GCATC	2 cut(s)	1000, 1667
BmtI	GCTAGC	1 cut(s)	1580
BmuI	ACTGGG	2 cut(s)	1435, 1792
BplI	GAGNNNNNCTC	2 cut(s)	1007, 1039
BpmI	CTGGAG	6 cut(s)	168, 192, 273, 681, 801, 1773
Bpu10I	CCTNAGC	1 cut(s)	1557
BpuEI	CTTGAG	1 cut(s)	1406
BsaBI	GATNNNNATC	2 cut(s)	879, 1491
BsaHI	GRCGYC	2 cut(s)	5, 1735
BsaI	GGTCTC	2 cut(s)	1248, 1335
BsaJI	CCNNGG	3 cut(s)	607, 1146, 1249
Bsc4I	CCNNNNNNNGG	1 cut(s)	1078
Bse1I	ACTGG	6 cut(s)	908, 1430, 1732, 1739, 1756, 1787
Bse8I	GATNNNNATC	2 cut(s)	879, 1491
BseBI	CCWGG	2 cut(s)	803, 1148
BseDI	CCNNGG	3 cut(s)	607, 1146, 1249
BseGI	GGATG	5 cut(s)	602, 616, 1492, 1503, 1822
BseJI	GATNNNNATC	2 cut(s)	879, 1491
BseLI	CCNNNNNNNGG	1 cut(s)	1078
BseMII	CTCAG	3 cut(s)	1050, 1668, 2037
BseNI	ACTGG	6 cut(s)	908, 1430, 1732, 1739, 1756, 1787
BseRI	GAGGAG	2 cut(s)	1015, 1778
BseSI	GKGCMC	1 cut(s)	1188
BseXI	GCAGC	6 cut(s)	788, 1023, 1185, 1280, 1535, 2139
BseYI	CCCAGC	1 cut(s)	2012
BshFI	GGCC	6 cut(s)	1041, 1050, 1151, 1248, 1430, 1792
BshNI	GGYRCC	1 cut(s)	4
BsiHKAI	GWGCWC	5 cut(s)	89, 936, 1103, 1188, 1960
BsiHKCI	CYCGRG	2 cut(s)	1432, 1715
BslFI	GGGAC	3 cut(s)	676, 1642, 1995
BslI	CCNNNNNNNGG	1 cut(s)	1078
BsmAI	GTCTC	5 cut(s)	249, 1235, 1248, 1318, 1335
BsmFI	GGGAC	3 cut(s)	676, 1642, 1995
BsmI	GAATGC	1 cut(s)	1915
BsnI	GGCC	6 cut(s)	1041, 1050, 1151, 1248, 1430, 1792
Bso31I	GGTCTC	2 cut(s)	1248, 1335
BsoBI	CYCGRG	2 cut(s)	1432, 1715
Bsp1286I	GDGCHC	5 cut(s)	89, 936, 1103, 1188, 1960
Bsp143I	GATC	5 cut(s)	874, 1454, 1500, 1840, 1864
BspACI	CCGC	3 cut(s)	300, 582, 1303
BspANI	GGCC	6 cut(s)	1041, 1050, 1151, 1248, 1430, 1792
BspCNI	CTCAG	3 cut(s)	1049, 1669, 2038
BspLI	GGNNCC	2 cut(s)	6, 1647
BspOI	GCTAGC	1 cut(s)	1580
BspPI	GGATC	3 cut(s)	869, 1462, 1835
BspT107I	GGYRCC	1 cut(s)	4
BspTNI	GGTCTC	2 cut(s)	1248, 1335
BsrBI	CCGCTC	1 cut(s)	300
BsrI	ACTGG	6 cut(s)	908, 1430, 1732, 1739, 1756, 1787
BssECI	CCNNGG	3 cut(s)	607, 1146, 1249
BssMI	GATC	5 cut(s)	874, 1454, 1500, 1840, 1864
BssNI	GRCGYC	2 cut(s)	5, 1735
BssSI	CACGAG	2 cut(s)	1096, 1617
BssT1I	CCWWGG	2 cut(s)	607, 1249
Bst2BI	CACGAG	2 cut(s)	1096, 1617
Bst2UI	CCWGG	2 cut(s)	803, 1148
Bst4CI	ACNGT	3 cut(s)	681, 849, 1829
Bst6I	CTCTTC	2 cut(s)	1866, 2151
BstACI	GRCGYC	2 cut(s)	5, 1735
BstC8I	GCNNGC	4 cut(s)	666, 1470, 1578, 1882
BstDEI	CTNAG	6 cut(s)	1036, 1120, 1557, 1677, 1774, 2046
BstF5I	GGATG	5 cut(s)	602, 616, 1492, 1503, 1822
BstH2I	RGCGCY	2 cut(s)	8, 2019
BstHHI	GCGC	3 cut(s)	7, 991, 2018
BstKTI	GATC	5 cut(s)	877, 1457, 1503, 1843, 1867
BstMAI	GTCTC	5 cut(s)	249, 1235, 1248, 1318, 1335
BstMBI	GATC	5 cut(s)	874, 1454, 1500, 1840, 1864
BstMWI	GCNNNNNNNGC	6 cut(s)	707, 782, 1047, 1562, 1582, 1717
BstNI	CCWGG	2 cut(s)	803, 1148
BstNSI	RCATGY	4 cut(s)	668, 825, 949, 1896
BstSCI	CCNGG	2 cut(s)	801, 1146
BstSFI	CTRYAG	1 cut(s)	1825
BstSLI	GKGCMC	1 cut(s)	1188
BstV1I	GCAGC	6 cut(s)	788, 1023, 1185, 1280, 1535, 2139
BstX2I	RGATCY	1 cut(s)	1454
BstXI	CCANNNNNNTGG	2 cut(s)	1159, 1425
BstYI	RGATCY	1 cut(s)	1454
BsuRI	GGCC	6 cut(s)	1041, 1050, 1151, 1248, 1430, 1792
BtsCI	GGATG	5 cut(s)	602, 616, 1492, 1503, 1822
BtsIMutI	CAGTG	4 cut(s)	1083, 1746, 1749, 1834
Cac8I	GCNNGC	4 cut(s)	666, 1470, 1578, 1882
CfoI	GCGC	3 cut(s)	7, 991, 2018
Cfr13I	GGNCC	3 cut(s)	1040, 1049, 1428
CseI	GACGC	1 cut(s)	1887
Csp6I	GTAC	3 cut(s)	919, 1639, 1952
CspCI	CAANNNNNGTGG	4 cut(s)	187, 217, 222, 252
CviQI	GTAC	3 cut(s)	919, 1639, 1952
DdeI	CTNAG	6 cut(s)	1036, 1120, 1557, 1677, 1774, 2046
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	5 cut(s)	876, 1456, 1502, 1842, 1866
DpnII	GATC	5 cut(s)	874, 1454, 1500, 1840, 1864
DrdI	GACNNNNNNGTC	1 cut(s)	1681
DseDI	GACNNNNNNGTC	1 cut(s)	1681
EaeI	YGGCCR	1 cut(s)	1246
Eam1104I	CTCTTC	2 cut(s)	1866, 2151
EarI	CTCTTC	2 cut(s)	1866, 2151
Ecl136II	GAGCTC	1 cut(s)	87
Eco130I	CCWWGG	2 cut(s)	607, 1249
Eco147I	AGGCCT	1 cut(s)	1792
Eco24I	GRGCYC	1 cut(s)	89
Eco31I	GGTCTC	2 cut(s)	1248, 1335
Eco47III	AGCGCT	1 cut(s)	2017
Eco53kI	GAGCTC	1 cut(s)	87
Eco57I	CTGAAG	3 cut(s)	147, 1059, 1119
Eco88I	CYCGRG	2 cut(s)	1432, 1715
EcoICRI	GAGCTC	1 cut(s)	87
EcoO109I	RGGNCCY	1 cut(s)	1040
EcoRI	GAATTC	1 cut(s)	1262
EcoRII	CCWGG	2 cut(s)	801, 1146
EcoT14I	CCWWGG	2 cut(s)	607, 1249
EcoT38I	GRGCYC	1 cut(s)	89
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	2 cut(s)	607, 1249
FaqI	GGGAC	3 cut(s)	676, 1642, 1995
FauI	CCCGC	2 cut(s)	293, 575
FauNDI	CATATG	1 cut(s)	1111
FbaI	TGATCA	1 cut(s)	1864
FblI	GTMKAC	2 cut(s)	1613, 1779
Fnu4HI	GCNGC	6 cut(s)	777, 1012, 1199, 1269, 1524, 2128
FokI	GGATG	5 cut(s)	589, 603, 1479, 1490, 1829
FriOI	GRGCYC	1 cut(s)	89
Fsp4HI	GCNGC	6 cut(s)	777, 1012, 1199, 1269, 1524, 2128
GlaI	GCGC	3 cut(s)	6, 990, 2017
GluI	GCNGC	6 cut(s)	777, 1012, 1199, 1269, 1524, 2128
GsaI	CCCAGC	1 cut(s)	2016
GsuI	CTGGAG	6 cut(s)	168, 192, 273, 681, 801, 1773
HaeII	RGCGCY	2 cut(s)	8, 2019
HaeIII	GGCC	6 cut(s)	1041, 1050, 1151, 1248, 1430, 1792
HgaI	GACGC	1 cut(s)	1887
HhaI	GCGC	3 cut(s)	7, 991, 2018
Hin1I	GRCGYC	2 cut(s)	5, 1735
Hin6I	GCGC	3 cut(s)	5, 989, 2016
HinP1I	GCGC	3 cut(s)	5, 989, 2016
HincII	GTYRAC	2 cut(s)	1674, 1902
HindII	GTYRAC	2 cut(s)	1674, 1902
HinfI	GANTC	7 cut(s)	20, 275, 613, 1089, 1408, 2054, 2060
HphI	GGTGA	3 cut(s)	738, 747, 1292
Hpy166II	GTNNAC	7 cut(s)	1186, 1415, 1614, 1674, 1744, 1780, 1902
Hpy188I	TCNGA	6 cut(s)	127, 345, 411, 1687, 2047, 2059
Hpy8I	GTNNAC	7 cut(s)	1186, 1415, 1614, 1674, 1744, 1780, 1902
Hpy99I	CGWCG	1 cut(s)	1737
HpyCH4III	ACNGT	3 cut(s)	681, 849, 1829
HpyCH4IV	ACGT	3 cut(s)	936, 1599, 1735
HpyF10VI	GCNNNNNNNGC	6 cut(s)	707, 782, 1047, 1562, 1582, 1717
HpyF3I	CTNAG	6 cut(s)	1036, 1120, 1557, 1677, 1774, 2046
HpySE526I	ACGT	3 cut(s)	936, 1599, 1735
Hsp92I	GRCGYC	2 cut(s)	5, 1735
HspAI	GCGC	3 cut(s)	5, 989, 2016
KasI	GGCGCC	1 cut(s)	4
Ksp22I	TGATCA	1 cut(s)	1864
Kzo9I	GATC	5 cut(s)	874, 1454, 1500, 1840, 1864
LmnI	GCTCC	5 cut(s)	267, 782, 914, 986, 1651
Lsp1109I	GCAGC	6 cut(s)	788, 1023, 1185, 1280, 1535, 2139
LweI	GCATC	2 cut(s)	1000, 1667
MaeII	ACGT	3 cut(s)	936, 1599, 1735
MaeIII	GTNAC	5 cut(s)	119, 245, 590, 1511, 1600
MalI	GATC	5 cut(s)	876, 1456, 1502, 1842, 1866
MbiI	CCGCTC	1 cut(s)	300
MboI	GATC	5 cut(s)	874, 1454, 1500, 1840, 1864
MboII	GAAGA	6 cut(s)	72, 850, 1496, 1883, 2092, 2168
MflI	RGATCY	1 cut(s)	1454
MhlI	GDGCHC	5 cut(s)	89, 936, 1103, 1188, 1960
MlsI	TGGCCA	1 cut(s)	1248
MluNI	TGGCCA	1 cut(s)	1248
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	2054
MmeI	TCCRAC	3 cut(s)	953, 1053, 2082
Mox20I	TGGCCA	1 cut(s)	1248
MscI	TGGCCA	1 cut(s)	1248
MseI	TTAA	3 cut(s)	1335, 1518, 1535
Msp20I	TGGCCA	1 cut(s)	1248
MspA1I	CMGCKG	1 cut(s)	779
MspR9I	CCNGG	2 cut(s)	803, 1148
Mva1269I	GAATGC	1 cut(s)	1915
MvaI	CCWGG	2 cut(s)	803, 1148
MwoI	GCNNNNNNNGC	6 cut(s)	707, 782, 1047, 1562, 1582, 1717
NarI	GGCGCC	1 cut(s)	5
NdeI	CATATG	1 cut(s)	1111
NdeII	GATC	5 cut(s)	874, 1454, 1500, 1840, 1864
NheI	GCTAGC	1 cut(s)	1576
NlaIV	GGNNCC	2 cut(s)	6, 1647
NmuCI	GTSAC	1 cut(s)	1511
NspI	RCATGY	4 cut(s)	668, 825, 949, 1896
PaeI	GCATGC	1 cut(s)	668
PaeR7I	CTCGAG	2 cut(s)	1432, 1715
PceI	AGGCCT	1 cut(s)	1792
PcsI	WCGNNNNNNNCGW	1 cut(s)	80
PctI	GAATGC	1 cut(s)	1915
PfeI	GAWTC	6 cut(s)	20, 275, 613, 1089, 1408, 2054
PflFI	GACNNNGTC	1 cut(s)	1734
PkrI	GCNGC	6 cut(s)	778, 1013, 1200, 1270, 1525, 2129
PleI	GAGTC	1 cut(s)	2054
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	1 cut(s)	2054
Psp124BI	GAGCTC	1 cut(s)	89
Psp1406I	AACGTT	1 cut(s)	1599
Psp6I	CCWGG	2 cut(s)	801, 1146
PspFI	CCCAGC	1 cut(s)	2012
PspGI	CCWGG	2 cut(s)	801, 1146
PspN4I	GGNNCC	2 cut(s)	6, 1647
PspPI	GGNCC	3 cut(s)	1040, 1049, 1428
PspXI	VCTCGAGB	1 cut(s)	1432
PsuI	RGATCY	1 cut(s)	1454
PsyI	GACNNNGTC	1 cut(s)	1734
PvuII	CAGCTG	1 cut(s)	779
RsaI	GTAC	3 cut(s)	920, 1640, 1953
RsaNI	GTAC	3 cut(s)	919, 1639, 1952
SacI	GAGCTC	1 cut(s)	89
SaqAI	TTAA	3 cut(s)	1335, 1518, 1535
SatI	GCNGC	6 cut(s)	777, 1012, 1199, 1269, 1524, 2128
Sau3AI	GATC	5 cut(s)	874, 1454, 1500, 1840, 1864
Sau96I	GGNCC	3 cut(s)	1040, 1049, 1428
SchI	GAGTC	1 cut(s)	2054
ScrFI	CCNGG	2 cut(s)	803, 1148
SduI	GDGCHC	5 cut(s)	89, 936, 1103, 1188, 1960
SfaNI	GCATC	2 cut(s)	1000, 1667
SfcI	CTRYAG	1 cut(s)	1825
SfiI	GGCCNNNNNGGCC	1 cut(s)	1047
SfoI	GGCGCC	1 cut(s)	6
Sfr274I	CTCGAG	2 cut(s)	1432, 1715
SlaI	CTCGAG	2 cut(s)	1432, 1715
SmlI	CTYRAG	3 cut(s)	1385, 1432, 1715
SmoI	CTYRAG	3 cut(s)	1385, 1432, 1715
SpeI	ACTAGT	1 cut(s)	2039
SphI	GCATGC	1 cut(s)	668
SseBI	AGGCCT	1 cut(s)	1792
SsiI	CCGC	3 cut(s)	300, 582, 1303
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	1 cut(s)	1531
SstI	GAGCTC	1 cut(s)	89
StuI	AGGCCT	1 cut(s)	1792
StyD4I	CCNGG	2 cut(s)	801, 1146
StyI	CCWWGG	2 cut(s)	607, 1249
TaaI	ACNGT	3 cut(s)	681, 849, 1829
TaiI	ACGT	3 cut(s)	939, 1602, 1738
TaqI	TCGA	5 cut(s)	83, 296, 1433, 1661, 1716
TaqII	GACCGA	2 cut(s)	1272, 1359
TfiI	GAWTC	6 cut(s)	20, 275, 613, 1089, 1408, 2054
Tru1I	TTAA	3 cut(s)	1335, 1518, 1535
Tru9I	TTAA	3 cut(s)	1335, 1518, 1535
TscAI	CASTG	4 cut(s)	1083, 1746, 1756, 1834
TseFI	GTSAC	1 cut(s)	1511
TseI	GCWGC	6 cut(s)	776, 1011, 1198, 1268, 1523, 2127
Tsp45I	GTSAC	1 cut(s)	1511
TspDTI	ATGAA	5 cut(s)	956, 1034, 1388, 2007, 2093
TspGWI	ACGGA	1 cut(s)	1353
TspRI	CASTG	4 cut(s)	1083, 1746, 1756, 1834
Tth111I	GACNNNGTC	1 cut(s)	1734
VneI	GTGCAC	1 cut(s)	1184
XapI	RAATTY	3 cut(s)	34, 1262, 2083
XbaI	TCTAGA	1 cut(s)	827
XceI	RCATGY	4 cut(s)	668, 825, 949, 1896
XcmI	CCANNNNNNNNNTGG	2 cut(s)	512, 1422
XhoI	CTCGAG	2 cut(s)	1432, 1715
XmiI	GTMKAC	2 cut(s)	1613, 1779
ZraI	GACGTC	1 cut(s)	1736

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.