Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0012712

Physical Location & Seq

Genomic Coordinates Forward (+)

1117513 .. 1121236

Gene Structure 3724 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0007400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGTTCCGGCGCGAGGCGGTAGTTGACGGTCGCACCAGAGTGTCAGGGGCTGACAGGAAGAAGCTCAAGAGGACCGTCAAGGAGAGATTTCCCAGAGCTTCCGACGCCGATATCGATGCTTTACTCCCTCCCAAGATTACCGGAGTTTACACTGTTATATGGGTTTTACCAGACTTCTTTTTATCCCGTGGAGAGAAAGGTTTCAAGTATCAAAATCGAGTCCTTGTATATGGCATAGAGGGAGGCTTTCCTATGTTTTTTGATATTGACGGGCGTGGCAAAGAAATTTTTCCCACAGTTTATGCCCTCTGGAAGGTCCCTGATATCTTGCCTTCTTTCATGCTGAAAGGGGGTGAGGTTTCTCGATATGTTATTGGAGGGGCGGATTTGATGTTTCCTGGTATCAGCATACCTGCTGAAGGCCTACCATCATTTATAGCTGGGGAAGCTTGGGCGATTAAAGTTCGAGGAAATCCAGCTCCCACTGCTGTGGGAACTACTACTATGAGCTGCACTGAAGCATTAAAAGCTGGGTTGCGGGGAAAAGCCTTAAAAATTGCTCACTATTATGGTGACTTACTTTGGGAATCAGTTGAGGGCCCTTATGTGCCAAATGCAGGTTTCTTAGAAGATGCTGATTTTGAGGATCCTACCTTGTTATCAGCTCAAATTTCTGATTCGTATAATGGTGCAAATGATGGATCACATGATCAACTGAATGGCATTGATGATAAGGAAATGGGGCAACATGTTGATGTTGCTGATGTGCAGTCTGAACCAAGTTCTGCTCCGGTTGCACCGATTAATGTTAGGAATGAGATTGCTGAGGAAGTAACTGCAATTGTAGGTGATCTGAAGCTAACAGATGATTCCGCTGATCAGTCGACTGGGGAGGATCAACAACCTCTTTCTGCTGAGGATGTGGACATGCTTTTGGAAAAATGCCTCTTGCAAGCATTGCATACAACTGTCAAAGACAAAGACCTTCCCATGCCCGGAAGCACTCTATGGTCAAACTATGTTTTACCTTGTAGGCCTTCAGGCATCACACTAGACATCAAGAAATCATCATACAAAAAATTATACCAAAGAGTTGTTGGTCTAGCGGTCAGGCCCTTGATCAGAGTGAAGGAAGATAAATATAAGGAGTCTGTATTACTTTCTGTTAACCGCAGCCATCCAGATTACTCATCTTTCAAGCCAGAGAAACGACAAGTTGAAGAAGCTGTTCAAACTGGTGTTCCTGCTGTCAGTGAAAGTCGGTCGGTCAAAATCCTTGAATTGGCTGAGATCTATAAACCAAGTGTACGTGTAAATCCAGTATTTGCTTCTGTAGGTGCTGACACAGGGGAGCTTTACAGTGCTTCAGATGCCACTGACATTGTGTTTAAATATGTTGAAAAGGAAAACCTGGTTAAGCCGACAGATAAATCCATTGTGATTTTGGATGCGGTAGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 ko05169 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164 map05169

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

486

Amino Acids

53.3

Weight (kDa)

5.12

Isoelectric Point (pI)

32.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pre-PUA	PF17832	2 - 107	7.5e-12	Pre-PUA-like domain
PUA_elF2D	PF26292	118 - 192	1.1e-21	elF2D, PUA domain
WHD_eIF2D	PF25304	309 - 390	1.2e-22	eIF2D winged helix domain
SWIB_eIF2D	PF26291	432 - 485	1.2e-08	eIF2D, SWIB domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012712)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49270 AT3G18810 AT4G34440 AT4G34440
fragaria_vesca	FvH4_2g08640
malus_domestica	MD05G1067600.v1.1 MD10G1077600.v1.1
prunus_persica	Prupe.8G098300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0264041
rosa_laevigata	RLG00000014294
rosa_roxburghii	Rroxscaffold_176G00431380 Rroxscaffold_7G00203640
rosa_rugosa	Rorug06G0007400 Rorug06G0007500
rosa_samantha	Rh6AG128700 Rh6CG123900 Rh6DG110700
rosa_wichuraiana	Rw6G011120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	421, 608
AccI	GTMKAC	1 cut(s)	884
AccII	CGCG	1 cut(s)	12
AciI	CCGC	7 cut(s)	17, 383, 538, 873, 1106, 1171, 1451
AclWI	GGATC	4 cut(s)	641, 654, 709, 903
AcsI	RAATTY	2 cut(s)	285, 669
AcuI	CTGAAG	5 cut(s)	438, 537, 875, 1023, 1350
AcyI	GRCGYC	1 cut(s)	105
AfaI	GTAC	1 cut(s)	1308
AfiI	CCNNNNNNNGG	6 cut(s)	13, 313, 419, 617, 995, 1282
AflIII	ACRYGT	2 cut(s)	748, 1309
AgsI	TTSAA	6 cut(s)	205, 1198, 1220, 1232, 1280, 1400
AjnI	CCWGG	2 cut(s)	397, 1410
AleI	CACNNNNGTG	2 cut(s)	38, 488
AlwI	GGATC	4 cut(s)	641, 654, 709, 903
AlwNI	CAGNNNCTG	1 cut(s)	50
AoxI	GGCC	4 cut(s)	421, 598, 1034, 1112
ApaI	GGGCCC	1 cut(s)	602
ApeKI	GCWGC	2 cut(s)	510, 1173
ApoI	RAATTY	2 cut(s)	285, 669
AseI	ATTAAT	1 cut(s)	804
Asp700I	GAANNNNTTC	3 cut(s)	200, 288, 1227
AspLEI	GCGC	1 cut(s)	12
AspS9I	GGNCC	5 cut(s)	72, 316, 598, 599, 1113
AsuC2I	CCSGG	1 cut(s)	996
AsuHPI	GGTGA	3 cut(s)	365, 584, 860
AvaII	GGWCC	2 cut(s)	72, 316
BaeGI	GKGCMC	1 cut(s)	602
BamHI	GGATCC	1 cut(s)	646
BanII	GRGCYC	1 cut(s)	602
BbvCI	CCTCAGC	2 cut(s)	825, 915
BbvI	GCAGC	2 cut(s)	497, 1185
BccI	CCATC	3 cut(s)	436, 692, 1185
BcgI	CGANNNNNNTGC	2 cut(s)	98, 132
BciT130I	CCWGG	2 cut(s)	399, 1412
BclI	TGATCA	3 cut(s)	709, 877, 1119
BcnI	CCSGG	1 cut(s)	996
BfaI	CTAG	2 cut(s)	1052, 1103
BfmI	CTRYAG	1 cut(s)	1332
BfuAI	ACCTGC	2 cut(s)	421, 608
BglII	AGATCT	1 cut(s)	1290
BisI	GCNGC	2 cut(s)	511, 1174
BlsI	GCNGC	2 cut(s)	512, 1175
Bme1390I	CCNGG	3 cut(s)	399, 996, 1412
Bme18I	GGWCC	2 cut(s)	72, 316
BmgT120I	GGNCC	5 cut(s)	72, 316, 598, 599, 1113
BmiI	GGNNCC	3 cut(s)	318, 600, 648
BmrFI	CCNGG	3 cut(s)	399, 996, 1412
BmrI	ACTGGG	1 cut(s)	897
BmsI	GCATC	5 cut(s)	106, 622, 1053, 1360, 1438
BmuI	ACTGGG	1 cut(s)	897
Bpu10I	CCTNAGC	2 cut(s)	825, 915
BpuEI	CTTGAG	1 cut(s)	50
BpuMI	CCSGG	1 cut(s)	996
Bsa29I	ATCGAT	1 cut(s)	114
BsaAI	YACGTR	1 cut(s)	1310
BsaHI	GRCGYC	1 cut(s)	105
BsaJI	CCNNGG	1 cut(s)	187
BsaWI	WCCGGW	2 cut(s)	140, 790
Bsc4I	CCNNNNNNNGG	6 cut(s)	13, 313, 419, 617, 995, 1282
Bse1I	ACTGG	3 cut(s)	892, 1240, 1319
Bse3DI	GCAATG	1 cut(s)	956
BseBI	CCWGG	2 cut(s)	399, 1412
BseCI	ATCGAT	1 cut(s)	114
BseDI	CCNNGG	1 cut(s)	187
BseGI	GGATG	3 cut(s)	925, 1177, 1453
BseLI	CCNNNNNNNGG	6 cut(s)	13, 313, 419, 617, 995, 1282
BseMI	GCAATG	1 cut(s)	956
BseMII	CTCAG	3 cut(s)	816, 906, 1278
BseNI	ACTGG	3 cut(s)	892, 1240, 1319
BseSI	GKGCMC	1 cut(s)	602
BseXI	GCAGC	2 cut(s)	497, 1185
BseYI	CCCAGC	2 cut(s)	440, 530
BsgI	GTGCAG	2 cut(s)	496, 788
Bsh1236I	CGCG	1 cut(s)	12
Bsh1285I	CGRYCG	2 cut(s)	31, 1265
BshFI	GGCC	4 cut(s)	423, 600, 1036, 1114
BshVI	ATCGAT	1 cut(s)	114
BsiEI	CGRYCG	2 cut(s)	31, 1265
BsiSI	CCGG	4 cut(s)	7, 141, 791, 996
BslFI	GGGAC	1 cut(s)	302
BslI	CCNNNNNNNGG	6 cut(s)	13, 313, 419, 617, 995, 1282
BsmFI	GGGAC	1 cut(s)	302
BsnI	GGCC	4 cut(s)	423, 600, 1036, 1114
Bsp120I	GGGCCC	1 cut(s)	598
Bsp1286I	GDGCHC	1 cut(s)	602
Bsp143I	GATC	8 cut(s)	646, 701, 709, 850, 877, 895, 1119, 1290
BspACI	CCGC	7 cut(s)	17, 383, 538, 873, 1106, 1171, 1451
BspANI	GGCC	4 cut(s)	423, 600, 1036, 1114
BspCNI	CTCAG	3 cut(s)	817, 907, 1279
BspDI	ATCGAT	1 cut(s)	114
BspFNI	CGCG	1 cut(s)	12
BspLI	GGNNCC	3 cut(s)	318, 600, 648
BspMI	ACCTGC	2 cut(s)	421, 608
BspPI	GGATC	4 cut(s)	641, 654, 709, 903
BsrDI	GCAATG	1 cut(s)	956
BsrI	ACTGG	3 cut(s)	892, 1240, 1319
BssECI	CCNNGG	1 cut(s)	187
BssMI	GATC	8 cut(s)	646, 701, 709, 850, 877, 895, 1119, 1290
BssNI	GRCGYC	1 cut(s)	105
Bst2UI	CCWGG	2 cut(s)	399, 1412
Bst4CI	ACNGT	6 cut(s)	29, 76, 154, 298, 970, 1361
BstACI	GRCGYC	1 cut(s)	105
BstAPI	GCANNNNNTGC	1 cut(s)	958
BstBAI	YACGTR	1 cut(s)	1310
BstC8I	GCNNGC	1 cut(s)	954
BstDEI	CTNAG	4 cut(s)	625, 825, 915, 1287
BstDSI	CCRYGG	1 cut(s)	187
BstENI	CCTNNNNNAGG	2 cut(s)	311, 417
BstF5I	GGATG	3 cut(s)	925, 1177, 1453
BstFNI	CGCG	1 cut(s)	12
BstHHI	GCGC	1 cut(s)	12
BstKTI	GATC	8 cut(s)	649, 704, 712, 853, 880, 898, 1122, 1293
BstMBI	GATC	8 cut(s)	646, 701, 709, 850, 877, 895, 1119, 1290
BstMCI	CGRYCG	2 cut(s)	31, 1265
BstMWI	GCNNNNNNNGC	7 cut(s)	104, 446, 485, 527, 794, 958, 1370
BstNI	CCWGG	2 cut(s)	399, 1412
BstNSI	RCATGY	2 cut(s)	752, 931
BstSCI	CCNGG	3 cut(s)	397, 994, 1410
BstSFI	CTRYAG	1 cut(s)	1332
BstSLI	GKGCMC	1 cut(s)	602
BstUI	CGCG	1 cut(s)	12
BstV1I	GCAGC	2 cut(s)	497, 1185
BstX2I	RGATCY	2 cut(s)	646, 1290
BstXI	CCANNNNNNTGG	1 cut(s)	490
BstYI	RGATCY	2 cut(s)	646, 1290
Bsu15I	ATCGAT	1 cut(s)	114
BsuRI	GGCC	4 cut(s)	423, 600, 1036, 1114
BsuTUI	ATCGAT	1 cut(s)	114
BtgI	CCRYGG	1 cut(s)	187
BtsCI	GGATG	3 cut(s)	925, 1177, 1453
BtsI	GCAGTG	1 cut(s)	483
BtsIMutI	CAGTG	6 cut(s)	150, 483, 513, 1258, 1366, 1374
BveI	ACCTGC	2 cut(s)	421, 608
Cac8I	GCNNGC	1 cut(s)	954
CaiI	CAGNNNCTG	1 cut(s)	50
CfoI	GCGC	1 cut(s)	12
Cfr13I	GGNCC	5 cut(s)	72, 316, 598, 599, 1113
ClaI	ATCGAT	1 cut(s)	114
CseI	GACGC	1 cut(s)	113
CsiI	ACCWGGT	1 cut(s)	1410
Csp6I	GTAC	1 cut(s)	1307
CspCI	CAANNNNNGTGG	2 cut(s)	1363, 1398
CviAII	CATG	5 cut(s)	340, 707, 749, 928, 991
CviQI	GTAC	1 cut(s)	1307
DdeI	CTNAG	4 cut(s)	625, 825, 915, 1287
DpnI	GATC	8 cut(s)	648, 703, 711, 852, 879, 897, 1121, 1292
DpnII	GATC	8 cut(s)	646, 701, 709, 850, 877, 895, 1119, 1290
DraI	TTTAAA	1 cut(s)	1390
EciI	GGCGGA	1 cut(s)	398
Eco147I	AGGCCT	2 cut(s)	423, 1036
Eco24I	GRGCYC	1 cut(s)	602
Eco32I	GATATC	2 cut(s)	112, 325
Eco47I	GGWCC	2 cut(s)	72, 316
Eco57I	CTGAAG	5 cut(s)	438, 537, 875, 1023, 1350
EcoNI	CCTNNNNNAGG	2 cut(s)	311, 417
EcoO109I	RGGNCCY	4 cut(s)	316, 598, 599, 1113
EcoRII	CCWGG	2 cut(s)	397, 1410
EcoRV	GATATC	2 cut(s)	112, 325
EcoT38I	GRGCYC	1 cut(s)	602
FaeI	CATG	5 cut(s)	343, 710, 752, 931, 994
FaqI	GGGAC	1 cut(s)	302
FatI	CATG	5 cut(s)	339, 706, 748, 927, 990
FauI	CCCGC	1 cut(s)	531
FbaI	TGATCA	3 cut(s)	709, 877, 1119
FblI	GTMKAC	1 cut(s)	884
Fnu4HI	GCNGC	2 cut(s)	511, 1174
FokI	GGATG	2 cut(s)	932, 1164
FriOI	GRGCYC	1 cut(s)	602
Fsp4HI	GCNGC	2 cut(s)	511, 1174
FspBI	CTAG	2 cut(s)	1052, 1103
GlaI	GCGC	1 cut(s)	11
GluI	GCNGC	2 cut(s)	511, 1174
GsaI	CCCAGC	2 cut(s)	444, 534
HaeIII	GGCC	4 cut(s)	423, 600, 1036, 1114
HapII	CCGG	4 cut(s)	7, 141, 791, 996
HgaI	GACGC	1 cut(s)	113
HhaI	GCGC	1 cut(s)	12
Hin1I	GRCGYC	1 cut(s)	105
Hin1II	CATG	5 cut(s)	343, 710, 752, 931, 994
Hin6I	GCGC	1 cut(s)	10
HinP1I	GCGC	1 cut(s)	10
HincII	GTYRAC	3 cut(s)	25, 885, 1168
HindII	GTYRAC	3 cut(s)	25, 885, 1168
HindIII	AAGCTT	1 cut(s)	447
HinfI	GANTC	5 cut(s)	219, 587, 677, 869, 1148
HpaI	GTTAAC	1 cut(s)	1168
HpaII	CCGG	4 cut(s)	7, 141, 791, 996
HphI	GGTGA	3 cut(s)	365, 584, 860
Hpy166II	GTNNAC	6 cut(s)	25, 148, 885, 925, 1168, 1307
Hpy188I	TCNGA	6 cut(s)	103, 676, 775, 855, 1124, 1369
Hpy188III	TCNNGA	5 cut(s)	67, 310, 363, 1060, 1181
Hpy8I	GTNNAC	6 cut(s)	25, 148, 885, 925, 1168, 1307
Hpy99I	CGWCG	1 cut(s)	107
HpyAV	CCTTC	6 cut(s)	307, 342, 413, 995, 1047, 1123
HpyCH4III	ACNGT	6 cut(s)	29, 76, 154, 298, 970, 1361
HpyCH4IV	ACGT	1 cut(s)	1309
HpyCH4V	TGCA	8 cut(s)	513, 617, 692, 769, 797, 839, 952, 961
HpyF10VI	GCNNNNNNNGC	7 cut(s)	104, 446, 485, 527, 794, 958, 1370
HpyF3I	CTNAG	4 cut(s)	625, 825, 915, 1287
HpySE526I	ACGT	1 cut(s)	1309
Hsp92I	GRCGYC	1 cut(s)	105
Hsp92II	CATG	5 cut(s)	343, 710, 752, 931, 994
HspAI	GCGC	1 cut(s)	10
Ksp22I	TGATCA	3 cut(s)	709, 877, 1119
KspAI	GTTAAC	1 cut(s)	1168
Kzo9I	GATC	8 cut(s)	646, 701, 709, 850, 877, 895, 1119, 1290
LmnI	GCTCC	3 cut(s)	484, 793, 1351
Lsp1109I	GCAGC	2 cut(s)	497, 1185
LweI	GCATC	5 cut(s)	106, 622, 1053, 1360, 1438
MabI	ACCWGGT	1 cut(s)	1410
MaeI	CTAG	2 cut(s)	1052, 1103
MaeII	ACGT	1 cut(s)	1309
MaeIII	GTNAC	2 cut(s)	572, 832
MalI	GATC	8 cut(s)	648, 703, 711, 852, 879, 897, 1121, 1292
MboI	GATC	8 cut(s)	646, 701, 709, 850, 877, 895, 1119, 1290
MboII	GAAGA	4 cut(s)	70, 641, 1145, 1232
MfeI	CAATTG	1 cut(s)	840
MflI	RGATCY	2 cut(s)	646, 1290
MhlI	GDGCHC	1 cut(s)	602
MluCI	AATT	6 cut(s)	285, 555, 669, 840, 1079, 1280
MlyI	GAGTC	2 cut(s)	228, 1157
MmeI	TCCRAC	1 cut(s)	126
MroXI	GAANNNNTTC	3 cut(s)	200, 288, 1227
MseI	TTAA	7 cut(s)	459, 524, 551, 804, 1167, 1389, 1416
MslI	CAYNNNNRTG	4 cut(s)	38, 488, 567, 753
MspA1I	CMGCKG	1 cut(s)	875
MspI	CCGG	4 cut(s)	7, 141, 791, 996
MspR9I	CCNGG	3 cut(s)	399, 996, 1412
MunI	CAATTG	1 cut(s)	840
MvaI	CCWGG	2 cut(s)	399, 1412
MvnI	CGCG	1 cut(s)	12
MwoI	GCNNNNNNNGC	7 cut(s)	104, 446, 485, 527, 794, 958, 1370
NciI	CCSGG	1 cut(s)	996
NdeII	GATC	8 cut(s)	646, 701, 709, 850, 877, 895, 1119, 1290
NlaIII	CATG	5 cut(s)	343, 710, 752, 931, 994
NlaIV	GGNNCC	3 cut(s)	318, 600, 648
NmuCI	GTSAC	1 cut(s)	572
NspI	RCATGY	2 cut(s)	752, 931
OliI	CACNNNNGTG	2 cut(s)	38, 488
PceI	AGGCCT	2 cut(s)	423, 1036
PciI	ACATGT	1 cut(s)	748
PcsI	WCGNNNNNNNCGW	1 cut(s)	111
PdmI	GAANNNNTTC	3 cut(s)	200, 288, 1227
PfeI	GAWTC	3 cut(s)	587, 677, 869
PkrI	GCNGC	2 cut(s)	512, 1175
PleI	GAGTC	2 cut(s)	227, 1156
PpsI	GAGTC	2 cut(s)	227, 1156
Ppu21I	YACGTR	1 cut(s)	1310
PpuMI	RGGWCCY	1 cut(s)	316
PscI	ACATGT	1 cut(s)	748
PshBI	ATTAAT	1 cut(s)	804
Psp5II	RGGWCCY	1 cut(s)	316
Psp6I	CCWGG	2 cut(s)	397, 1410
PspFI	CCCAGC	2 cut(s)	440, 530
PspGI	CCWGG	2 cut(s)	397, 1410
PspN4I	GGNNCC	3 cut(s)	318, 600, 648
PspOMI	GGGCCC	1 cut(s)	598
PspPI	GGNCC	5 cut(s)	72, 316, 598, 599, 1113
PspPPI	RGGWCCY	1 cut(s)	316
PstNI	CAGNNNCTG	1 cut(s)	50
PsuI	RGATCY	2 cut(s)	646, 1290
RsaI	GTAC	1 cut(s)	1308
RsaNI	GTAC	1 cut(s)	1307
RseI	CAYNNNNRTG	4 cut(s)	38, 488, 567, 753
SalI	GTCGAC	1 cut(s)	883
SaqAI	TTAA	7 cut(s)	459, 524, 551, 804, 1167, 1389, 1416
SatI	GCNGC	2 cut(s)	511, 1174
Sau3AI	GATC	8 cut(s)	646, 701, 709, 850, 877, 895, 1119, 1290
Sau96I	GGNCC	5 cut(s)	72, 316, 598, 599, 1113
SchI	GAGTC	2 cut(s)	228, 1157
ScrFI	CCNGG	3 cut(s)	399, 996, 1412
SduI	GDGCHC	1 cut(s)	602
SexAI	ACCWGGT	1 cut(s)	1410
SfaNI	GCATC	5 cut(s)	106, 622, 1053, 1360, 1438
SfcI	CTRYAG	1 cut(s)	1332
SinI	GGWCC	2 cut(s)	72, 316
SmiMI	CAYNNNNRTG	4 cut(s)	38, 488, 567, 753
SmlI	CTYRAG	1 cut(s)	65
SmoI	CTYRAG	1 cut(s)	65
Sse9I	AATT	6 cut(s)	285, 555, 669, 840, 1079, 1280
SseBI	AGGCCT	2 cut(s)	423, 1036
SsiI	CCGC	7 cut(s)	17, 383, 538, 873, 1106, 1171, 1451
SspMI	CTAG	2 cut(s)	1052, 1103
StuI	AGGCCT	2 cut(s)	423, 1036
StyD4I	CCNGG	3 cut(s)	397, 994, 1410
TaaI	ACNGT	6 cut(s)	29, 76, 154, 298, 970, 1361
TaiI	ACGT	1 cut(s)	1312
TaqI	TCGA	5 cut(s)	114, 217, 364, 466, 884
TaqII	GACCGA	2 cut(s)	1251, 1255
TasI	AATT	6 cut(s)	285, 555, 669, 840, 1079, 1280
TfiI	GAWTC	3 cut(s)	587, 677, 869
Tru1I	TTAA	7 cut(s)	459, 524, 551, 804, 1167, 1389, 1416
Tru9I	TTAA	7 cut(s)	459, 524, 551, 804, 1167, 1389, 1416
TscAI	CASTG	6 cut(s)	157, 490, 520, 1258, 1366, 1381
TseFI	GTSAC	1 cut(s)	572
TseI	GCWGC	2 cut(s)	510, 1173
Tsp45I	GTSAC	1 cut(s)	572
TspDTI	ATGAA	1 cut(s)	328
TspRI	CASTG	6 cut(s)	157, 490, 520, 1258, 1366, 1381
VpaK11BI	GGWCC	2 cut(s)	72, 316
VspI	ATTAAT	1 cut(s)	804
XagI	CCTNNNNNAGG	2 cut(s)	311, 417
XapI	RAATTY	2 cut(s)	285, 669
XceI	RCATGY	2 cut(s)	752, 931
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1094, 1441
XmiI	GTMKAC	1 cut(s)	884
XmnI	GAANNNNTTC	3 cut(s)	200, 288, 1227
XspI	CTAG	2 cut(s)	1052, 1103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.