Rorug01G0002000

Probable lipid transfer

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0016698
Physical Location & Seq
Forward (+)
500887 .. 502894
2008 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0002000.1

Sequence Viewer

Length: 1536 bp
ATGTTGTCACAATTGTGGTCGTTTCTAGGACTCCTCACAGTCCTCCAGAACGTTCTGCCTTCCCAGCTCCTCTCAGTCCTCCATTCATTCTATCAGTCTCTCCAAGACATGCTCAGCCCTTACTCCTATCTCGACATCCCTGAGTTCAACGGCTACTGCGGCGTCGACGTCAATGACCTCTACCGCCACGTCAAACTCTACTTGAACTCGGTGAACCACCCGTCTGCTGCGTCCACCGCCAGCTGCCCCCGACTCACTCTCTCACGCTCCAACTCCTCCACACGCATTTCCTTCACCGTCGCAGCCAACCACTCCATCCGCGACTCCTTCCGCGGCCACAGCCTGTGCTGGACCCACAACGTCGACACCGTTCAGGACTCCCTGGACGAAAAGCGCAGCTTCGTCCTCAAGCTCCCCAAGCGCCACCACCACACCATCCTCCAGCCCTACTTGGACCACGTAACTGCACGTGCGCAGGATTTCGAGCGTGTCTCGAGGGAAAGAAGGCTGTTCACCAACAATGGCCACGGCTCCTACGACTCCGGCTGGGTCTCCGTCCCTTTCCGTCACCCTTCCACCTTTGACACTCTGGCACTCGAGCCCCAACTGAAGAAGCAACTAACGGAAGATCTCACCACGTTTTCCACCGGAAAAGAATTTTACCACAGAGTAGGGCGTGCTTGGAAGCGTGGCTACTTTCTTTACGGCCCACCCGGCTCCGGAAAGTCAAGCTTGATCGCTGCCATGGCCAACTATCTCTGCTATGACGTCTACGACCTCGAGCTAACCAAGGTTTCCGACAATTCCGAACTGCGTGCCTTACTCATACAAACGACGAACCGCTCCATCGTAGTGATAGAAGACATCGACTGCTCGGTTGATCTGACGGCGGACAGACTCTCCAAGAAAAGTAGAAAGAGATCATCATCATCATCATCGCCCATGCCCACCAAGGTCGACGAGGACGACGGCCGGCGTGTGACGCTGTCGGGGCTTCTCAACTTCACCGACGGGCTCTGGTCATGTTGTGGAGAAGAGAGGATCATAGTTTTCACCACCAACCACAGAGAAAACGTGGACCCGGCGCTACTCCGCTGCGGACGCATGGACGTGCACGTCAGCCTCGGACCGTGCGGGGCTCACGCTTTTAGGGCCTTAGTAAAGAACTATCTGGGGCTGGACTCCCACCCACTTTTCGAGGCGGTGGACAGTTGTGTGAGGTCGGGCGGGGCTCTGACGCCGGCACAGGTCGGGGAGATTTTGCTCCGAAACCGTGGTGATGCAAACTTGGCACTCAAGGAGGTGGTGTCGGCCATGCAGGGAAGGATTTTGGGTGGCGGGGTCCGAGACTTGACCACAGACTCCGAGGCGGAGACACAAACACTCTTGTTGCGTTCTCCAGAAAGCGTGCTGGTGGGTGGTGGGTCTCCGGATAATTGGGTGTCCTCATCGTCGCCAGGGAGGAAGAAAAGGGTCAAGTTCTTAGTGAGGCTGAGGTCTTTAACCAAGTCGGACTCCGTAAGAAGGGGGGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LTP_2

Protein Analysis

511

Amino Acids

56.9

Weight (kDa)

8.9

Isoelectric Point (pI)

51.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_assoc PF14363 19 - 120 5.2e-17 Domain associated at C-terminal with AAA
AAA PF00004 233 - 375 1.4e-13 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 378 - 440 4.9e-12 At3g28540-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016698)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07450
fragaria_vesca FvH4_7g00620
malus_domestica MD02G1316200.v1.1 MD07G1005700.v1.1
prunus_persica Prupe.2G008100_v2.0.a1 Prupe.2G008300_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0314811
rosa_multiflora Rmu_sc0025729.1_g000001
rosa_rugosa Rorug01G0002000
rosa_samantha Rh1AG012900 Rh1BG004500 Rh1CG011400 Rh1DG006200
rosa_wichuraiana Rw1G000550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1115
AatII GACGTC 2 cut(s) 171, 771
Acc16I TGCGCA 1 cut(s) 474
AccBSI CCGCTC 1 cut(s) 843
AccI GTMKAC 4 cut(s) 165, 363, 771, 957
AccII CGCG 2 cut(s) 321, 333
AccIII TCCGGA 2 cut(s) 719, 1429
AclI AACGTT 1 cut(s) 51
AclWI GGATC 1 cut(s) 1049
AcoI YGGCCR 5 cut(s) 334, 523, 747, 970, 1311
AcsI RAATTY 1 cut(s) 656
AcuI CTGAAG 1 cut(s) 629
AcvI CACGTG 1 cut(s) 470
AcyI GRCGYC 4 cut(s) 162, 168, 768, 1238
AfiI CCNNNNNNNGG 2 cut(s) 719, 1524
AgsI TTSAA 2 cut(s) 148, 205
AjiI CACGTC 3 cut(s) 190, 1111, 1117
AjnI CCWGG 2 cut(s) 381, 1456
AleI CACNNNNGTG 1 cut(s) 13
AluBI AGCT 6 cut(s) 67, 243, 399, 412, 732, 784
AluI AGCT 6 cut(s) 67, 243, 399, 412, 732, 784
Alw21I GWGCWC 1 cut(s) 1116
Alw26I GTCTC 6 cut(s) 102, 496, 556, 1341, 1367, 1431
Alw44I GTGCAC 1 cut(s) 1112
AlwI GGATC 1 cut(s) 1049
Ama87I CYCGRG 3 cut(s) 493, 596, 779
Aor13HI TCCGGA 2 cut(s) 719, 1429
AoxI GGCC 7 cut(s) 334, 523, 706, 747, 970, 1152, 1311
ApaLI GTGCAC 1 cut(s) 1112
ApeKI GCWGC 6 cut(s) 227, 243, 302, 396, 740, 1095
ApoI RAATTY 1 cut(s) 656
AspLEI GCGC 4 cut(s) 396, 423, 475, 1087
AspS9I GGNCC 7 cut(s) 351, 454, 707, 1078, 1127, 1152, 1342
AsuC2I CCSGG 2 cut(s) 714, 1082
AsuHPI GGTGA 8 cut(s) 223, 286, 505, 560, 625, 997, 1045, 1289
AvaI CYCGRG 3 cut(s) 493, 596, 779
AvaII GGWCC 5 cut(s) 351, 454, 1078, 1127, 1342
BaeGI GKGCMC 1 cut(s) 1116
BalI TGGCCA 2 cut(s) 525, 749
BanII GRGCYC 4 cut(s) 603, 1017, 1141, 1234
BarI GAAGNNNNNNTAC 2 cut(s) 677, 709
BbrPI CACGTG 1 cut(s) 470
BbsI GAAGAC 1 cut(s) 867
Bbv12I GWGCWC 1 cut(s) 1116
BbvCI CCTCAGC 1 cut(s) 1493
BbvI GCAGC 6 cut(s) 214, 230, 314, 408, 727, 1082
BccI CCATC 3 cut(s) 323, 443, 854
BceAI ACGGC 5 cut(s) 166, 544, 721, 903, 985
BcgI CGANNNNNNTGC 2 cut(s) 797, 831
BciT130I CCWGG 2 cut(s) 383, 1458
BcnI CCSGG 2 cut(s) 714, 1082
BcoDI GTCTC 6 cut(s) 102, 496, 556, 1341, 1367, 1431
BfaI CTAG 1 cut(s) 26
BfoI RGCGCY 2 cut(s) 424, 1088
BglI GCCNNNNNGGC 1 cut(s) 714
BglII AGATCT 1 cut(s) 628
BisI GCNGC 8 cut(s) 160, 228, 244, 303, 334, 397, 741, 1096
BlpI GCTNAGC 1 cut(s) 113
BlsI GCNGC 8 cut(s) 161, 229, 245, 304, 335, 398, 742, 1097
Bme1390I CCNGG 4 cut(s) 383, 714, 1082, 1458
Bme18I GGWCC 5 cut(s) 351, 454, 1078, 1127, 1342
BmeT110I CYCGRG 3 cut(s) 493, 596, 779
BmgBI CACGTC 3 cut(s) 190, 1111, 1117
BmgT120I GGNCC 7 cut(s) 351, 454, 707, 1078, 1127, 1152, 1342
BmiI GGNNCC 5 cut(s) 353, 532, 718, 1080, 1343
BmrFI CCNGG 4 cut(s) 383, 714, 1082, 1458
BmsI GCATC 1 cut(s) 1270
BpiI GAAGAC 1 cut(s) 867
BplI GAGNNNNNCTC 2 cut(s) 476, 508
BpmI CTGGAG 3 cut(s) 29, 425, 1383
Bpu10I CCTNAGC 1 cut(s) 1493
Bpu1102I GCTNAGC 1 cut(s) 113
BpuEI CTTGAG 2 cut(s) 392, 1280
BpuMI CCSGG 2 cut(s) 714, 1082
BsaAI YACGTR 2 cut(s) 460, 470
BsaBI GATNNNNATC 1 cut(s) 925
BsaHI GRCGYC 4 cut(s) 162, 168, 768, 1238
BsaI GGTCTC 2 cut(s) 556, 1431
BsaWI WCCGGW 3 cut(s) 647, 719, 1429
BsaXI ACNNNNNCTCC 4 cut(s) 884, 914, 1292, 1322
Bsc4I CCNNNNNNNGG 2 cut(s) 719, 1524
Bse118I RCCGGY 2 cut(s) 972, 1240
Bse8I GATNNNNATC 1 cut(s) 925
BseAI TCCGGA 2 cut(s) 719, 1429
BseBI CCWGG 2 cut(s) 383, 1458
BseGI GGATG 3 cut(s) 135, 315, 435
BseJI GATNNNNATC 1 cut(s) 925
BseLI CCNNNNNNNGG 2 cut(s) 719, 1524
BseMII CTCAG 4 cut(s) 87, 127, 132, 1484
BseRI GAGGAG 3 cut(s) 23, 59, 265
BseSI GKGCMC 1 cut(s) 1116
BseX3I CGGCCG 1 cut(s) 970
BseXI GCAGC 6 cut(s) 214, 230, 314, 408, 727, 1082
BseYI CCCAGC 2 cut(s) 63, 546
BsgI GTGCAG 1 cut(s) 450
Bsh1236I CGCG 2 cut(s) 321, 333
Bsh1285I CGRYCG 1 cut(s) 973
BshFI GGCC 7 cut(s) 336, 525, 708, 749, 972, 1154, 1313
BsiEI CGRYCG 1 cut(s) 973
BsiHKAI GWGCWC 1 cut(s) 1116
BsiHKCI CYCGRG 3 cut(s) 493, 596, 779
BsiSI CCGG 8 cut(s) 543, 648, 714, 720, 973, 1082, 1241, 1430
BslFI GGGAC 1 cut(s) 542
BslI CCNNNNNNNGG 2 cut(s) 719, 1524
BsmAI GTCTC 6 cut(s) 102, 496, 556, 1341, 1367, 1431
BsmFI GGGAC 1 cut(s) 542
BsnI GGCC 7 cut(s) 336, 525, 708, 749, 972, 1154, 1313
Bso31I GGTCTC 2 cut(s) 556, 1431
BsoBI CYCGRG 3 cut(s) 493, 596, 779
Bsp1286I GDGCHC 5 cut(s) 603, 1017, 1116, 1141, 1234
Bsp13I TCCGGA 2 cut(s) 719, 1429
Bsp143I GATC 5 cut(s) 628, 735, 880, 920, 1041
Bsp1720I GCTNAGC 1 cut(s) 113
Bsp19I CCATGG 1 cut(s) 744
BspANI GGCC 7 cut(s) 336, 525, 708, 749, 972, 1154, 1313
BspCNI CTCAG 4 cut(s) 86, 126, 133, 1485
BspEI TCCGGA 2 cut(s) 719, 1429
BspFNI CGCG 2 cut(s) 321, 333
BspLI GGNNCC 5 cut(s) 353, 532, 718, 1080, 1343
BspPI GGATC 1 cut(s) 1049
BspTNI GGTCTC 2 cut(s) 556, 1431
BsrBI CCGCTC 1 cut(s) 843
BsrFI RCCGGY 2 cut(s) 972, 1240
BssAI RCCGGY 2 cut(s) 972, 1240
BssMI GATC 5 cut(s) 628, 735, 880, 920, 1041
BssNI GRCGYC 4 cut(s) 162, 168, 768, 1238
BssT1I CCWWGG 3 cut(s) 744, 789, 951
Bst2UI CCWGG 2 cut(s) 383, 1458
Bst4CI ACNGT 6 cut(s) 40, 298, 370, 1131, 1211, 1274
Bst6I CTCTTC 1 cut(s) 1029
BstACI GRCGYC 4 cut(s) 162, 168, 768, 1238
BstBAI YACGTR 2 cut(s) 460, 470
BstC8I GCNNGC 6 cut(s) 241, 678, 816, 974, 1242, 1409
BstDEI CTNAG 6 cut(s) 73, 113, 141, 1156, 1483, 1493
BstDSI CCRYGG 4 cut(s) 331, 526, 744, 1273
BstF5I GGATG 3 cut(s) 135, 315, 435
BstFNI CGCG 2 cut(s) 321, 333
BstH2I RGCGCY 2 cut(s) 424, 1088
BstHHI GCGC 4 cut(s) 396, 423, 475, 1087
BstKTI GATC 5 cut(s) 631, 738, 883, 923, 1044
BstMAI GTCTC 6 cut(s) 102, 496, 556, 1341, 1367, 1431
BstMBI GATC 5 cut(s) 628, 735, 880, 920, 1041
BstMCI CGRYCG 1 cut(s) 973
BstNI CCWGG 2 cut(s) 383, 1458
BstNSI RCATGY 1 cut(s) 112
BstSCI CCNGG 4 cut(s) 381, 712, 1080, 1456
BstSLI GKGCMC 1 cut(s) 1116
BstUI CGCG 2 cut(s) 321, 333
BstV1I GCAGC 6 cut(s) 214, 230, 314, 408, 727, 1082
BstV2I GAAGAC 1 cut(s) 867
BstX2I RGATCY 1 cut(s) 628
BstYI RGATCY 1 cut(s) 628
BstZI CGGCCG 1 cut(s) 970
BsuRI GGCC 7 cut(s) 336, 525, 708, 749, 972, 1154, 1313
BtgI CCRYGG 4 cut(s) 331, 526, 744, 1273
BtgZI GCGATG 1 cut(s) 921
BtrI CACGTC 3 cut(s) 190, 1111, 1117
BtsCI GGATG 3 cut(s) 135, 315, 435
Cac8I GCNNGC 6 cut(s) 241, 678, 816, 974, 1242, 1409
CfoI GCGC 4 cut(s) 396, 423, 475, 1087
Cfr10I RCCGGY 2 cut(s) 972, 1240
Cfr13I GGNCC 7 cut(s) 351, 454, 707, 1078, 1127, 1152, 1342
Cfr42I CCGCGG 1 cut(s) 334
CpoI CGGWCCG 1 cut(s) 1127
CseI GACGC 5 cut(s) 151, 219, 991, 1110, 1246
CspI CGGWCCG 1 cut(s) 1127
CviAII CATG 6 cut(s) 109, 745, 943, 1023, 1105, 1315
DdeI CTNAG 6 cut(s) 73, 113, 141, 1156, 1483, 1493
DpnI GATC 5 cut(s) 630, 737, 882, 922, 1043
DpnII GATC 5 cut(s) 628, 735, 880, 920, 1041
DrdI GACNNNNNNGTC 1 cut(s) 1115
DseDI GACNNNNNNGTC 1 cut(s) 1115
EaeI YGGCCR 5 cut(s) 334, 523, 747, 970, 1311
EagI CGGCCG 1 cut(s) 970
Eam1104I CTCTTC 1 cut(s) 1029
EarI CTCTTC 1 cut(s) 1029
EciI GGCGGA 2 cut(s) 905, 1385
EclXI CGGCCG 1 cut(s) 970
Eco130I CCWWGG 3 cut(s) 744, 789, 951
Eco24I GRGCYC 4 cut(s) 603, 1017, 1141, 1234
Eco31I GGTCTC 2 cut(s) 556, 1431
Eco47I GGWCC 5 cut(s) 351, 454, 1078, 1127, 1342
Eco52I CGGCCG 1 cut(s) 970
Eco57I CTGAAG 1 cut(s) 629
Eco72I CACGTG 1 cut(s) 470
Eco88I CYCGRG 3 cut(s) 493, 596, 779
EcoO109I RGGNCCY 1 cut(s) 1152
EcoRII CCWGG 2 cut(s) 381, 1456
EcoT14I CCWWGG 3 cut(s) 744, 789, 951
EcoT38I GRGCYC 4 cut(s) 603, 1017, 1141, 1234
ErhI CCWWGG 3 cut(s) 744, 789, 951
FaeI CATG 6 cut(s) 112, 748, 946, 1026, 1108, 1318
FalI AAGNNNNNCTT 4 cut(s) 383, 415, 716, 748
FaqI GGGAC 1 cut(s) 542
FatI CATG 6 cut(s) 108, 744, 942, 1022, 1104, 1314
FauI CCCGC 3 cut(s) 1127, 1220, 1331
FblI GTMKAC 4 cut(s) 165, 363, 771, 957
Fnu4HI GCNGC 8 cut(s) 160, 228, 244, 303, 334, 397, 741, 1096
FokI GGATG 3 cut(s) 122, 302, 422
FriOI GRGCYC 4 cut(s) 603, 1017, 1141, 1234
Fsp4HI GCNGC 8 cut(s) 160, 228, 244, 303, 334, 397, 741, 1096
FspBI CTAG 1 cut(s) 26
FspI TGCGCA 1 cut(s) 474
GlaI GCGC 4 cut(s) 395, 422, 474, 1086
GluI GCNGC 8 cut(s) 160, 228, 244, 303, 334, 397, 741, 1096
GsaI CCCAGC 2 cut(s) 67, 550
GsuI CTGGAG 3 cut(s) 29, 425, 1383
HaeII RGCGCY 2 cut(s) 424, 1088
HaeIII GGCC 7 cut(s) 336, 525, 708, 749, 972, 1154, 1313
HapII CCGG 8 cut(s) 543, 648, 714, 720, 973, 1082, 1241, 1430
HgaI GACGC 5 cut(s) 151, 219, 991, 1110, 1246
HhaI GCGC 4 cut(s) 396, 423, 475, 1087
Hin1I GRCGYC 4 cut(s) 162, 168, 768, 1238
Hin1II CATG 6 cut(s) 112, 748, 946, 1026, 1108, 1318
Hin6I GCGC 4 cut(s) 394, 421, 473, 1085
HinP1I GCGC 4 cut(s) 394, 421, 473, 1085
HincII GTYRAC 3 cut(s) 166, 364, 958
HindII GTYRAC 3 cut(s) 166, 364, 958
HindIII AAGCTT 1 cut(s) 730
HinfI GANTC 9 cut(s) 30, 252, 323, 377, 539, 897, 1181, 1361, 1514
HpaII CCGG 8 cut(s) 543, 648, 714, 720, 973, 1082, 1241, 1430
HphI GGTGA 8 cut(s) 223, 286, 505, 560, 625, 997, 1045, 1289
Hpy188I TCNGA 9 cut(s) 799, 808, 885, 1127, 1236, 1268, 1346, 1366, 1513
Hpy188III TCNNGA 7 cut(s) 46, 131, 374, 493, 720, 1400, 1430
Hpy99I CGWCG 9 cut(s) 167, 170, 302, 365, 838, 962, 971, 1013, 1456
HpyAV CCTTC 7 cut(s) 69, 301, 337, 498, 582, 1317, 1518
HpyCH4III ACNGT 6 cut(s) 40, 298, 370, 1131, 1211, 1274
HpyCH4V TGCA 4 cut(s) 467, 1114, 1283, 1318
HpyF3I CTNAG 6 cut(s) 73, 113, 141, 1156, 1483, 1493
Hsp92I GRCGYC 4 cut(s) 162, 168, 768, 1238
Hsp92II CATG 6 cut(s) 112, 748, 946, 1026, 1108, 1318
HspAI GCGC 4 cut(s) 394, 421, 473, 1085
Kpn2I TCCGGA 2 cut(s) 719, 1429
KroI GCCGGC 2 cut(s) 972, 1240
KroNI GCCGGC 2 cut(s) 974, 1242
KspI CCGCGG 1 cut(s) 334
Kzo9I GATC 5 cut(s) 628, 735, 880, 920, 1041
LmnI GCTCC 7 cut(s) 72, 272, 417, 536, 722, 848, 1269
Lsp1109I GCAGC 6 cut(s) 214, 230, 314, 408, 727, 1082
LweI GCATC 1 cut(s) 1270
MaeI CTAG 1 cut(s) 26
MaeIII GTNAC 4 cut(s) 6, 460, 566, 979
MalI GATC 5 cut(s) 630, 737, 882, 922, 1043
MbiI CCGCTC 1 cut(s) 843
MboI GATC 5 cut(s) 628, 735, 880, 920, 1041
MboII GAAGA 5 cut(s) 622, 638, 872, 1046, 1477
MfeI CAATTG 1 cut(s) 11
MflI RGATCY 1 cut(s) 628
MhlI GDGCHC 5 cut(s) 603, 1017, 1116, 1141, 1234
MlsI TGGCCA 2 cut(s) 525, 749
MluCI AATT 4 cut(s) 11, 656, 802, 1435
MluNI TGGCCA 2 cut(s) 525, 749
MlyI GAGTC 9 cut(s) 24, 246, 317, 371, 533, 891, 1175, 1355, 1508
MmeI TCCRAC 3 cut(s) 294, 822, 1491
Mox20I TGGCCA 2 cut(s) 525, 749
MroI TCCGGA 2 cut(s) 719, 1429
MroNI GCCGGC 2 cut(s) 972, 1240
MscI TGGCCA 2 cut(s) 525, 749
MseI TTAA 1 cut(s) 1502
MslI CAYNNNNRTG 3 cut(s) 13, 851, 1109
Msp20I TGGCCA 2 cut(s) 525, 749
MspA1I CMGCKG 3 cut(s) 243, 333, 1095
MspI CCGG 8 cut(s) 543, 648, 714, 720, 973, 1082, 1241, 1430
MspR9I CCNGG 4 cut(s) 383, 714, 1082, 1458
MunI CAATTG 1 cut(s) 11
MvaI CCWGG 2 cut(s) 383, 1458
MvnI CGCG 2 cut(s) 321, 333
NaeI GCCGGC 2 cut(s) 974, 1242
NciI CCSGG 2 cut(s) 714, 1082
NcoI CCATGG 1 cut(s) 744
NdeII GATC 5 cut(s) 628, 735, 880, 920, 1041
NgoMIV GCCGGC 2 cut(s) 972, 1240
NlaIII CATG 6 cut(s) 112, 748, 946, 1026, 1108, 1318
NlaIV GGNNCC 5 cut(s) 353, 532, 718, 1080, 1343
NmuCI GTSAC 3 cut(s) 6, 566, 979
NsbI TGCGCA 1 cut(s) 474
NspI RCATGY 1 cut(s) 112
OliI CACNNNNGTG 1 cut(s) 13
PaeR7I CTCGAG 3 cut(s) 493, 596, 779
PcsI WCGNNNNNNNCGW 3 cut(s) 366, 534, 963
PdiI GCCGGC 2 cut(s) 974, 1242
PflFI GACNNNGTC 1 cut(s) 985
PkrI GCNGC 8 cut(s) 161, 229, 245, 304, 335, 398, 742, 1097
PleI GAGTC 9 cut(s) 24, 246, 317, 371, 533, 891, 1175, 1355, 1508
PmaCI CACGTG 1 cut(s) 470
PmlI CACGTG 1 cut(s) 470
PpsI GAGTC 9 cut(s) 24, 246, 317, 371, 533, 891, 1175, 1355, 1508
Ppu21I YACGTR 2 cut(s) 460, 470
Psp1406I AACGTT 1 cut(s) 51
Psp6I CCWGG 2 cut(s) 381, 1456
PspCI CACGTG 1 cut(s) 470
PspFI CCCAGC 2 cut(s) 63, 546
PspGI CCWGG 2 cut(s) 381, 1456
PspN4I GGNNCC 5 cut(s) 353, 532, 718, 1080, 1343
PspPI GGNCC 7 cut(s) 351, 454, 707, 1078, 1127, 1152, 1342
PspXI VCTCGAGB 2 cut(s) 596, 779
PsuI RGATCY 1 cut(s) 628
PsyI GACNNNGTC 1 cut(s) 985
PvuII CAGCTG 1 cut(s) 243
RseI CAYNNNNRTG 3 cut(s) 13, 851, 1109
Rsr2I CGGWCCG 1 cut(s) 1127
RsrII CGGWCCG 1 cut(s) 1127
SacII CCGCGG 1 cut(s) 334
SalI GTCGAC 3 cut(s) 164, 362, 956
SaqAI TTAA 1 cut(s) 1502
SatI GCNGC 8 cut(s) 160, 228, 244, 303, 334, 397, 741, 1096
Sau3AI GATC 5 cut(s) 628, 735, 880, 920, 1041
Sau96I GGNCC 7 cut(s) 351, 454, 707, 1078, 1127, 1152, 1342
SchI GAGTC 9 cut(s) 24, 246, 317, 371, 533, 891, 1175, 1355, 1508
ScrFI CCNGG 4 cut(s) 383, 714, 1082, 1458
SduI GDGCHC 5 cut(s) 603, 1017, 1116, 1141, 1234
SfaNI GCATC 1 cut(s) 1270
Sfr274I CTCGAG 3 cut(s) 493, 596, 779
Sfr303I CCGCGG 1 cut(s) 334
SgrBI CCGCGG 1 cut(s) 334
SgrDI CGTCGACG 1 cut(s) 164
SinI GGWCC 5 cut(s) 351, 454, 1078, 1127, 1342
SlaI CTCGAG 3 cut(s) 493, 596, 779
SmiMI CAYNNNNRTG 3 cut(s) 13, 851, 1109
SmlI CTYRAG 5 cut(s) 407, 493, 596, 779, 1295
SmoI CTYRAG 5 cut(s) 407, 493, 596, 779, 1295
Sse9I AATT 4 cut(s) 11, 656, 802, 1435
SspMI CTAG 1 cut(s) 26
StyD4I CCNGG 4 cut(s) 381, 712, 1080, 1456
StyI CCWWGG 3 cut(s) 744, 789, 951
TaaI ACNGT 6 cut(s) 40, 298, 370, 1131, 1211, 1274
TasI AATT 4 cut(s) 11, 656, 802, 1435
TauI GCSGC 2 cut(s) 162, 336
Tru1I TTAA 1 cut(s) 1502
Tru9I TTAA 1 cut(s) 1502
TseFI GTSAC 3 cut(s) 6, 566, 979
TseI GCWGC 6 cut(s) 227, 243, 302, 396, 740, 1095
Tsp45I GTSAC 3 cut(s) 6, 566, 979
TspDTI ATGAA 1 cut(s) 75
TspGWI ACGGA 4 cut(s) 544, 554, 638, 1507
Tth111I GACNNNGTC 1 cut(s) 985
VneI GTGCAC 1 cut(s) 1112
VpaK11BI GGWCC 5 cut(s) 351, 454, 1078, 1127, 1342
XapI RAATTY 1 cut(s) 656
XceI RCATGY 1 cut(s) 112
XhoI CTCGAG 3 cut(s) 493, 596, 779
XmiI GTMKAC 4 cut(s) 165, 363, 771, 957
XspI CTAG 1 cut(s) 26
ZraI GACGTC 2 cut(s) 169, 769
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.