Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0015681

Physical Location & Seq

Genomic Coordinates Reverse (-)

16685025 .. 16691902

Gene Structure 6878 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0100200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2817 bp

ATGGCTACTCTTCTTGTAACCGCCTTCAGCCAAAACTCACGGTATGTAGACCTTGGAATTGCTCGGTTGTTTTCTCAGGATGGAGTAGAGCATGAAGAAGAGAACACACAGGCTGAAGTTTATGATAGAATAAAATTCAGAGAACGTTTCCTTGTTTTTCTCCTTGTACCAAGTACCAACAACGTCCAGGAGAGAGTCAAACATGATTTGCACGGCCAAGCTTCGAAAGGACGAGTACCCACAAAACCAATTGGACCAGGTTTAGTGATCAATGATGAATTTCTTCAATGGGAATTGTCAACCATCGATGACCTACCTGCGACTAATGTGGAACGGGAACCGGAAAAGATAGAAGATGGGAAAGATGGAGGTCCTTCATTCCACTGTAAACTTTACAGCACGGAATTAGTCCACAAGATAGCTCAGGTTTTCATTCCTGGATTAGCTACTGCATGTGTTGATAACACATCTGGTGATATCTTCAAGACCCCTGCTTCTGTGGCCGCCGATGTGAGAAAGGAAATGGTGGAGTATATCACTCAAAGAAGTGAGAATTTTGTTGCAGAATCTGTTATCCTAGAAGGGGGCCAAGATGGACAAGTATCTGATCATCCCTATGACATAATTTCTGATTTTGTTGATGACTTTGCGAGTTCCAAGAGAAATTTGTTTAGTCGGGTTTCGGGATGGCTGCTCAGTGAAAAGAGAGAAGATAAAATAGATGATTTTGTTCAAGAGATGGAAATAAATGGGTTTTGGTTGGTTGATAAAAGAGAAACAATAGCACAAAATTTGCTAAAGAATGTCGACCTTAAGAATGAGCATCACTGCAATATGAAATTTCACACCCCAGAGGAGCTTGAAGCGCATGTTCTAAAGTGTAGCTATAGGTCTATGAGTTGCATACATGAAGGATGTAATGTCAAATTTTGTGCAAGTCAAGTGGATAAACATGATGCAGTTTGCCCCTTCAAGATAATTCCATGCGAACAAAACTGCTCCGACATGATCATGAGACGTGAAATGGACAGACATTGTATTACCATCTGTCCAATGAAGCTTGTTAGTTGTCCATTCTATGCAGTGGGTTGTCAATCCCCTGTACCACATTGTAAGCTTGAGCAGCATCGTTCAGATGATCTCCATTCTCACATGCTGTTTGTTCTACAAAGTATTCATAAGGAAGCATCTATGGAAGATCTGAAAAGAAGGCTGGAGCAACTAAAAGACGCATCTTCATCCAATAACTTGGCACAAGCTCGAGATGTGAGATCACTAACCTCTGCAGTCAAGGAGCTTGAAGCAAAACTAGGGCCGATGGAAATTAGCAGGAAACACCATGAGGATCTTGAAGCAGAACATGGGCCAGAGGAAGTAGGCAGCAAAAGCAAAACTCCAGAGGATGTGGAATCAGGGCAAAAAGAAGTGAGTAATAAACCTGAGGAGGACTTTGAAGTAAAACCAGCACCAAAGGAAGTTAGCCAACAATCGGAGTATCTTGAAGCAAAATCAGAGCCAAAGGAAGTTAGTACTAAATCTGTGGAGGATCTTGAAGCTAAACTAGCACCAAAGGAAGATCTTGAAGCTAAACCAGCACCAAAGGAACTAAGCACCAAACCTGCAGAAGATCTTGAAGCAAAACCAGCTCCAAAGGAAGTTAGTAGTTCAAAAACCCCTAAAGATGTTGAAGAAAGGCCAGTGGGAGTGAGCGGTAAGGCTCCAACAGGACATGAAGCTAAACCAGCACCAAAGGAACTGAGCACCAAACTTGCAGAAGATCGTGAAGCAAAACCAGCTCCGAAAGAAGTCAGTAGTTCAAAACCCCCGCAAGATGTTGAAGCAAAAACAGTGGGAGTGAGCGCTACGGCCCCAACAGGACTTGAAGAAAAATTAGGGACAAAGGAACTGAGCACCAAACCTGCAGAAGATTGTGAGGCAAAACCAGCTCCAAAGGAAGTCAGTAGTTCAAAAACCCCCAAAGATGTTGAAGAAAGGCCAGTGGGAGGGAGCAGTAAGGCCCCAACAGGACATGAAGCTAAACCAGCACCAAAGGAACTGAGCACCAAACCTGCAGAAGATCTTGAAGCAAAACCAGCTCTGAAGGAAGTCAGTAGTTCAAAACCCCCCGAAGATGTTGAAACAAAAATAGTGGGAATGAGCGCTAAAGCCCCTACAGGACATGAAGAAAAATTAGGGACAAAGGAACTGAGCACCAAACCTGCAGAAGATCGTGAGGCAAAACCAGCTCCGAAGGAAGTCAATAGCTTAAAAACCCCCAAAGATGTTGAAGAAAGGCCAGTGGGAGTGAGTGGTAAGGATCCAACAGGACATGAAGCTAAACCAGCACCAAAGGAACTAAGCACCAAACCTGCAGAAGATCGTGAAGCAAAACCAGCTCCGAAAGAAGTCAGTAGTTTAAAACCCCCAGAAGATGTTGAAGCAAGGTCAGTGGGAGTGAGCAGTAAGGCCCCAACAGGACATGAAGAAAAATTAGGGACAAAGGAAGTGAGAAGCGAATTGCTAGAGGAGCTCGAAACAGAACTAGGAACAAAGGAAGTGGGAAGCAAACCACCAGAGGAACTTGAAACACAACTAGGAATCAAGGAAGTGAGCAGCAAACTTCAACAGGAACTTGAAACAAAACTAGGAAGAAAAGAGGTGGGCAGCAAAACCCCAGAAGGATACGAAAGACAATTAGTAACAAAGGATGTCAACAGAAAACCCGAGGAACTTAAAAAAGAACTAGGGACAAAGGAAGTGAGCAGCAAACCCCCAGAGGAACTCGAGAAATTAAGTGACAAAGGAAGTGAGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000287 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006553 GO:0006575 GO:0006732 GO:0006766 GO:0006767 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0008897 GO:0009058 GO:0009066 GO:0009067 GO:0009085 GO:0009987 GO:0015939 GO:0016053 GO:0016740 GO:0016772 GO:0016780 GO:0019752 GO:0019878 GO:0032787 GO:0034641 GO:0043167 GO:0043169 GO:0043436 GO:0043603 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046872 GO:0051186 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00770 map00770

Pfam Domains

Protein Families

ACPS

Protein Analysis

938

Amino Acids

103.51

Weight (kDa)

5.3

Isoelectric Point (pI)

44.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-TRAF	PF02176	318 - 376	1.4e-10	TRAF-type zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015681)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g05530
malus_domestica	MD02G1257000.v1.1
prunus_persica	Prupe.2G075500_v2.0.a1 Prupe.2G075500_v2.0.a1
pyrus_communis	pycom02g21730 pycom02g21770
rosa_chinensis	RchiOBHm_Chr1g0332361
rosa_laevigata	RLG00000029676
rosa_multiflora	Rmu_sc0003422.1_g000008
rosa_roxburghii	Rroxscaffold_4G00318260
rosa_rugosa	Rorug01G0100200
rosa_samantha	Rh1AG124100 Rh1BG094700 Rh1CG118100 Rh1DG129300
rosa_wichuraiana	Rw1G010100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	6 cut(s)	325, 1627, 1927, 2077, 2227, 2377
AccBSI	CCGCTC	1 cut(s)	1710
AccI	GTMKAC	2 cut(s)	48, 807
AciI	CCGC	4 cut(s)	21, 504, 1710, 1826
AclI	AACGTT	1 cut(s)	145
AclWI	GGATC	4 cut(s)	1353, 1554, 2312, 2325
AcoI	YGGCCR	2 cut(s)	214, 501
AcsI	RAATTY	7 cut(s)	134, 278, 553, 664, 790, 839, 926
AcuI	CTGAAG	3 cut(s)	10, 135, 2120
AfaI	GTAC	5 cut(s)	168, 175, 237, 1104, 1531
AfeI	AGCGCT	2 cut(s)	1861, 2161
AfiI	CCNNNNNNNGG	3 cut(s)	583, 1489, 2003
AflII	CTTAAG	1 cut(s)	812
AjiI	CACGTC	1 cut(s)	1019
AjnI	CCWGG	3 cut(s)	186, 256, 436
Alw21I	GWGCWC	5 cut(s)	1763, 1913, 2063, 2213, 2532
Alw26I	GTCTC	1 cut(s)	1009
AlwI	GGATC	4 cut(s)	1353, 1554, 2312, 2325
AlwNI	CAGNNNCTG	1 cut(s)	569
Ama87I	CYCGRG	3 cut(s)	1260, 2723, 2783
Aor51HI	AGCGCT	2 cut(s)	1861, 2161
ApeKI	GCWGC	6 cut(s)	691, 1123, 1380, 2613, 2664, 2763
ApoI	RAATTY	7 cut(s)	134, 278, 553, 664, 790, 839, 926
Asp700I	GAANNNNTTC	1 cut(s)	282
AspLEI	GCGC	3 cut(s)	868, 1862, 2162
AspS9I	GGNCC	8 cut(s)	254, 371, 586, 1313, 1364, 1867, 2017, 2467
AsuHPI	GGTGA	1 cut(s)	485
AsuII	TTCGAA	1 cut(s)	224
AvaI	CYCGRG	3 cut(s)	1260, 2723, 2783
AvaII	GGWCC	2 cut(s)	254, 371
AxyI	CCTNAGG	1 cut(s)	1440
BamHI	GGATCC	1 cut(s)	2317
BanII	GRGCYC	1 cut(s)	2532
Bbv12I	GWGCWC	5 cut(s)	1763, 1913, 2063, 2213, 2532
BbvI	GCAGC	6 cut(s)	678, 1135, 1392, 2625, 2676, 2775
BccI	CCATC	9 cut(s)	74, 311, 350, 359, 587, 681, 733, 1052, 1312
BceAI	ACGGC	2 cut(s)	229, 1881
BciT130I	CCWGG	3 cut(s)	188, 258, 438
BciVI	GTATCC	1 cut(s)	2675
BclI	TGATCA	3 cut(s)	267, 607, 1008
BcoDI	GTCTC	1 cut(s)	1009
BfaI	CTAG	8 cut(s)	578, 1310, 1562, 2522, 2543, 2594, 2645, 2744
BfmI	CTRYAG	8 cut(s)	886, 1284, 1620, 1920, 2070, 2172, 2220, 2370
BfoI	RGCGCY	2 cut(s)	1863, 2163
BfrI	CTTAAG	1 cut(s)	812
BfuAI	ACCTGC	6 cut(s)	325, 1627, 1927, 2077, 2227, 2377
BfuI	GTATCC	1 cut(s)	2675
BglII	AGATCT	4 cut(s)	1198, 1576, 1627, 2077
BisI	GCNGC	7 cut(s)	504, 692, 1124, 1381, 2614, 2665, 2764
BlsI	GCNGC	7 cut(s)	505, 693, 1125, 1382, 2615, 2666, 2765
BmcAI	AGTACT	1 cut(s)	1531
Bme1390I	CCNGG	3 cut(s)	188, 258, 438
Bme18I	GGWCC	2 cut(s)	254, 371
BmeT110I	CYCGRG	3 cut(s)	1260, 2723, 2783
BmgBI	CACGTC	1 cut(s)	1019
BmgT120I	GGNCC	8 cut(s)	254, 371, 586, 1313, 1364, 1867, 2017, 2467
BmiI	GGNNCC	7 cut(s)	339, 587, 1719, 1869, 2019, 2319, 2469
BmrFI	CCNGG	3 cut(s)	188, 258, 438
BmsI	GCATC	5 cut(s)	832, 946, 1135, 1196, 1241
BpmI	CTGGAG	2 cut(s)	1235, 1380
Bpu10I	CCTNAGC	1 cut(s)	423
Bpu14I	TTCGAA	1 cut(s)	224
BpuEI	CTTGAG	1 cut(s)	1139
Bsa29I	ATCGAT	1 cut(s)	306
BsaJI	CCNNGG	2 cut(s)	52, 2724
BsaWI	WCCGGW	1 cut(s)	340
Bsc4I	CCNNNNNNNGG	3 cut(s)	583, 1489, 2003
Bse1I	ACTGG	3 cut(s)	1697, 1997, 2297
Bse21I	CCTNAGG	1 cut(s)	1440
BseBI	CCWGG	3 cut(s)	188, 258, 438
BseCI	ATCGAT	1 cut(s)	306
BseDI	CCNNGG	2 cut(s)	52, 2724
BseGI	GGATG	7 cut(s)	85, 610, 692, 920, 1238, 1408, 2713
BseLI	CCNNNNNNNGG	3 cut(s)	583, 1489, 2003
BseMII	CTCAG	8 cut(s)	89, 437, 709, 1431, 1748, 1898, 2048, 2198
BseNI	ACTGG	3 cut(s)	1697, 1997, 2297
BseRI	GAGGAG	3 cut(s)	869, 1457, 2540
BseXI	GCAGC	6 cut(s)	678, 1135, 1392, 2625, 2676, 2775
BshVI	ATCGAT	1 cut(s)	306
BsiHKAI	GWGCWC	5 cut(s)	1763, 1913, 2063, 2213, 2532
BsiHKCI	CYCGRG	3 cut(s)	1260, 2723, 2783
BsiSI	CCGG	1 cut(s)	341
BslFI	GGGAC	4 cut(s)	1909, 2209, 2509, 2761
BslI	CCNNNNNNNGG	3 cut(s)	583, 1489, 2003
BsmAI	GTCTC	1 cut(s)	1009
BsmBI	CGTCTC	1 cut(s)	1009
BsmFI	GGGAC	4 cut(s)	1909, 2209, 2509, 2761
BsoBI	CYCGRG	3 cut(s)	1260, 2723, 2783
Bsp119I	TTCGAA	1 cut(s)	224
Bsp1286I	GDGCHC	5 cut(s)	1763, 1913, 2063, 2213, 2532
BspACI	CCGC	4 cut(s)	21, 504, 1710, 1826
BspCNI	CTCAG	8 cut(s)	88, 436, 708, 1432, 1749, 1899, 2049, 2199
BspDI	ATCGAT	1 cut(s)	306
BspHI	TCATGA	1 cut(s)	1011
BspLI	GGNNCC	7 cut(s)	339, 587, 1719, 1869, 2019, 2319, 2469
BspMAI	CTGCAG	6 cut(s)	1288, 1624, 1924, 2074, 2224, 2374
BspMI	ACCTGC	6 cut(s)	325, 1627, 1927, 2077, 2227, 2377
BspPI	GGATC	4 cut(s)	1353, 1554, 2312, 2325
BspT104I	TTCGAA	1 cut(s)	224
BspTI	CTTAAG	1 cut(s)	812
BsrBI	CCGCTC	1 cut(s)	1710
BsrI	ACTGG	3 cut(s)	1697, 1997, 2297
BssECI	CCNNGG	2 cut(s)	52, 2724
BssT1I	CCWWGG	1 cut(s)	52
Bst2UI	CCWGG	3 cut(s)	188, 258, 438
Bst4CI	ACNGT	3 cut(s)	42, 386, 1849
Bst6I	CTCTTC	2 cut(s)	15, 93
BstAFI	CTTAAG	1 cut(s)	812
BstBI	TTCGAA	1 cut(s)	224
BstF5I	GGATG	7 cut(s)	85, 610, 692, 920, 1238, 1408, 2713
BstH2I	RGCGCY	2 cut(s)	1863, 2163
BstHHI	GCGC	3 cut(s)	868, 1862, 2162
BstMAI	GTCTC	1 cut(s)	1009
BstNI	CCWGG	3 cut(s)	188, 258, 438
BstNSI	RCATGY	3 cut(s)	456, 872, 1156
BstSCI	CCNGG	3 cut(s)	186, 256, 436
BstSFI	CTRYAG	8 cut(s)	886, 1284, 1620, 1920, 2070, 2172, 2220, 2370
BstV1I	GCAGC	6 cut(s)	678, 1135, 1392, 2625, 2676, 2775
BstX2I	RGATCY	7 cut(s)	1198, 1345, 1546, 1576, 1627, 2077, 2317
BstXI	CCANNNNNNTGG	1 cut(s)	1249
BstYI	RGATCY	7 cut(s)	1198, 1345, 1546, 1576, 1627, 2077, 2317
Bsu15I	ATCGAT	1 cut(s)	306
Bsu36I	CCTNAGG	1 cut(s)	1440
BsuI	GTATCC	1 cut(s)	2675
BsuTUI	ATCGAT	1 cut(s)	306
BtrI	CACGTC	1 cut(s)	1019
BtsCI	GGATG	7 cut(s)	85, 610, 692, 920, 1238, 1408, 2713
BtsI	GCAGTG	2 cut(s)	826, 1089
BtsIMutI	CAGTG	9 cut(s)	382, 703, 826, 1089, 1704, 1854, 2004, 2304, 2454
BveI	ACCTGC	6 cut(s)	325, 1627, 1927, 2077, 2227, 2377
CaiI	CAGNNNCTG	1 cut(s)	569
CciI	TCATGA	1 cut(s)	1011
CfoI	GCGC	3 cut(s)	868, 1862, 2162
Cfr13I	GGNCC	8 cut(s)	254, 371, 586, 1313, 1364, 1867, 2017, 2467
ClaI	ATCGAT	1 cut(s)	306
CseI	GACGC	1 cut(s)	1238
CsiI	ACCWGGT	1 cut(s)	256
Csp6I	GTAC	5 cut(s)	167, 174, 236, 1103, 1530
CviQI	GTAC	5 cut(s)	167, 174, 236, 1103, 1530
DraI	TTTAAA	1 cut(s)	2418
EaeI	YGGCCR	2 cut(s)	214, 501
Eam1104I	CTCTTC	2 cut(s)	15, 93
EarI	CTCTTC	2 cut(s)	15, 93
Ecl136II	GAGCTC	1 cut(s)	2530
Eco130I	CCWWGG	1 cut(s)	52
Eco24I	GRGCYC	1 cut(s)	2532
Eco32I	GATATC	1 cut(s)	478
Eco47I	GGWCC	2 cut(s)	254, 371
Eco47III	AGCGCT	2 cut(s)	1861, 2161
Eco53kI	GAGCTC	1 cut(s)	2530
Eco57I	CTGAAG	3 cut(s)	10, 135, 2120
Eco81I	CCTNAGG	1 cut(s)	1440
Eco88I	CYCGRG	3 cut(s)	1260, 2723, 2783
EcoICRI	GAGCTC	1 cut(s)	2530
EcoO109I	RGGNCCY	3 cut(s)	371, 2017, 2467
EcoRII	CCWGG	3 cut(s)	186, 256, 436
EcoRV	GATATC	1 cut(s)	478
EcoT14I	CCWWGG	1 cut(s)	52
EcoT38I	GRGCYC	1 cut(s)	2532
ErhI	CCWWGG	1 cut(s)	52
Esp3I	CGTCTC	1 cut(s)	1009
FaqI	GGGAC	4 cut(s)	1909, 2209, 2509, 2761
FauI	CCCGC	1 cut(s)	1833
FbaI	TGATCA	3 cut(s)	267, 607, 1008
FblI	GTMKAC	2 cut(s)	48, 807
Fnu4HI	GCNGC	7 cut(s)	504, 692, 1124, 1381, 2614, 2665, 2764
FokI	GGATG	7 cut(s)	92, 597, 699, 927, 1225, 1415, 2720
FriOI	GRGCYC	1 cut(s)	2532
Fsp4HI	GCNGC	7 cut(s)	504, 692, 1124, 1381, 2614, 2665, 2764
FspBI	CTAG	8 cut(s)	578, 1310, 1562, 2522, 2543, 2594, 2645, 2744
GlaI	GCGC	3 cut(s)	867, 1861, 2161
GluI	GCNGC	7 cut(s)	504, 692, 1124, 1381, 2614, 2665, 2764
GsuI	CTGGAG	2 cut(s)	1235, 1380
HaeII	RGCGCY	2 cut(s)	1863, 2163
HapII	CCGG	1 cut(s)	341
HgaI	GACGC	1 cut(s)	1238
HhaI	GCGC	3 cut(s)	868, 1862, 2162
Hin6I	GCGC	3 cut(s)	866, 1860, 2160
HinP1I	GCGC	3 cut(s)	866, 1860, 2160
HincII	GTYRAC	3 cut(s)	300, 808, 2713
HindII	GTYRAC	3 cut(s)	300, 808, 2713
HindIII	AAGCTT	3 cut(s)	219, 1058, 1115
HinfI	GANTC	4 cut(s)	195, 566, 1409, 2598
HpaII	CCGG	1 cut(s)	341
HphI	GGTGA	1 cut(s)	485
Hpy166II	GTNNAC	6 cut(s)	49, 300, 389, 412, 808, 2713
Hpy8I	GTNNAC	6 cut(s)	49, 300, 389, 412, 808, 2713
HpyAV	CCTTC	9 cut(s)	34, 384, 575, 905, 979, 1203, 2095, 2245, 2672
HpyCH4III	ACNGT	3 cut(s)	42, 386, 1849
HpyCH4IV	ACGT	3 cut(s)	145, 183, 1018
HpySE526I	ACGT	3 cut(s)	145, 183, 1018
HspAI	GCGC	3 cut(s)	866, 1860, 2160
Ksp22I	TGATCA	3 cut(s)	267, 607, 1008
Lsp1109I	GCAGC	6 cut(s)	678, 1135, 1392, 2625, 2676, 2775
LweI	GCATC	5 cut(s)	832, 946, 1135, 1196, 1241
MabI	ACCWGGT	1 cut(s)	256
MaeI	CTAG	8 cut(s)	578, 1310, 1562, 2522, 2543, 2594, 2645, 2744
MaeII	ACGT	3 cut(s)	145, 183, 1018
MaeIII	GTNAC	3 cut(s)	16, 2698, 2795
MbiI	CCGCTC	1 cut(s)	1710
MfeI	CAATTG	1 cut(s)	249
MflI	RGATCY	7 cut(s)	1198, 1345, 1546, 1576, 1627, 2077, 2317
MhlI	GDGCHC	5 cut(s)	1763, 1913, 2063, 2213, 2532
MlyI	GAGTC	1 cut(s)	204
MmeI	TCCRAC	3 cut(s)	1026, 1745, 2345
MroXI	GAANNNNTTC	1 cut(s)	282
MseI	TTAA	5 cut(s)	813, 2267, 2417, 2733, 2792
MslI	CAYNNNNRTG	2 cut(s)	615, 1010
MspCI	CTTAAG	1 cut(s)	812
MspI	CCGG	1 cut(s)	341
MspR9I	CCNGG	3 cut(s)	188, 258, 438
MunI	CAATTG	1 cut(s)	249
MvaI	CCWGG	3 cut(s)	188, 258, 438
NlaIV	GGNNCC	7 cut(s)	339, 587, 1719, 1869, 2019, 2319, 2469
NmuCI	GTSAC	1 cut(s)	2795
NspI	RCATGY	3 cut(s)	456, 872, 1156
NspV	TTCGAA	1 cut(s)	224
PaeR7I	CTCGAG	2 cut(s)	1260, 2783
PagI	TCATGA	1 cut(s)	1011
PdmI	GAANNNNTTC	1 cut(s)	282
PfeI	GAWTC	3 cut(s)	566, 1409, 2598
PfoI	TCCNGGA	2 cut(s)	186, 436
PkrI	GCNGC	7 cut(s)	505, 693, 1125, 1382, 2615, 2666, 2765
PleI	GAGTC	1 cut(s)	203
PpsI	GAGTC	1 cut(s)	203
PpuMI	RGGWCCY	1 cut(s)	371
Psp124BI	GAGCTC	1 cut(s)	2532
Psp1406I	AACGTT	1 cut(s)	145
Psp5II	RGGWCCY	1 cut(s)	371
Psp6I	CCWGG	3 cut(s)	186, 256, 436
PspGI	CCWGG	3 cut(s)	186, 256, 436
PspN4I	GGNNCC	7 cut(s)	339, 587, 1719, 1869, 2019, 2319, 2469
PspPI	GGNCC	8 cut(s)	254, 371, 586, 1313, 1364, 1867, 2017, 2467
PspPPI	RGGWCCY	1 cut(s)	371
PstI	CTGCAG	6 cut(s)	1288, 1624, 1924, 2074, 2224, 2374
PstNI	CAGNNNCTG	1 cut(s)	569
PsuI	RGATCY	7 cut(s)	1198, 1345, 1546, 1576, 1627, 2077, 2317
RsaI	GTAC	5 cut(s)	168, 175, 237, 1104, 1531
RsaNI	GTAC	5 cut(s)	167, 174, 236, 1103, 1530
RseI	CAYNNNNRTG	2 cut(s)	615, 1010
SacI	GAGCTC	1 cut(s)	2532
SalI	GTCGAC	1 cut(s)	806
SaqAI	TTAA	5 cut(s)	813, 2267, 2417, 2733, 2792
SatI	GCNGC	7 cut(s)	504, 692, 1124, 1381, 2614, 2665, 2764
Sau96I	GGNCC	8 cut(s)	254, 371, 586, 1313, 1364, 1867, 2017, 2467
ScaI	AGTACT	1 cut(s)	1531
SchI	GAGTC	1 cut(s)	204
ScrFI	CCNGG	3 cut(s)	188, 258, 438
SduI	GDGCHC	5 cut(s)	1763, 1913, 2063, 2213, 2532
SexAI	ACCWGGT	1 cut(s)	256
SfaNI	GCATC	5 cut(s)	832, 946, 1135, 1196, 1241
SfcI	CTRYAG	8 cut(s)	886, 1284, 1620, 1920, 2070, 2172, 2220, 2370
Sfr274I	CTCGAG	2 cut(s)	1260, 2783
SfuI	TTCGAA	1 cut(s)	224
SinI	GGWCC	2 cut(s)	254, 371
SlaI	CTCGAG	2 cut(s)	1260, 2783
SmiMI	CAYNNNNRTG	2 cut(s)	615, 1010
SmlI	CTYRAG	4 cut(s)	812, 1118, 1260, 2783
SmoI	CTYRAG	4 cut(s)	812, 1118, 1260, 2783
SsiI	CCGC	4 cut(s)	21, 504, 1710, 1826
SspMI	CTAG	8 cut(s)	578, 1310, 1562, 2522, 2543, 2594, 2645, 2744
SstI	GAGCTC	1 cut(s)	2532
StyD4I	CCNGG	3 cut(s)	186, 256, 436
StyI	CCWWGG	1 cut(s)	52
TaaI	ACNGT	3 cut(s)	42, 386, 1849
TaiI	ACGT	3 cut(s)	148, 186, 1021
TaqI	TCGA	6 cut(s)	224, 306, 807, 1261, 2532, 2784
TatI	WGTACW	1 cut(s)	1529
TauI	GCSGC	1 cut(s)	506
TfiI	GAWTC	3 cut(s)	566, 1409, 2598
Tru1I	TTAA	5 cut(s)	813, 2267, 2417, 2733, 2792
Tru9I	TTAA	5 cut(s)	813, 2267, 2417, 2733, 2792
TscAI	CASTG	9 cut(s)	389, 703, 833, 1089, 1704, 1854, 2004, 2304, 2454
TseFI	GTSAC	1 cut(s)	2795
TseI	GCWGC	6 cut(s)	691, 1123, 1380, 2613, 2664, 2763
Tsp45I	GTSAC	1 cut(s)	2795
TspGWI	ACGGA	1 cut(s)	416
TspRI	CASTG	9 cut(s)	389, 703, 833, 1089, 1704, 1854, 2004, 2304, 2454
Vha464I	CTTAAG	1 cut(s)	812
VpaK11BI	GGWCC	2 cut(s)	254, 371
XapI	RAATTY	7 cut(s)	134, 278, 553, 664, 790, 839, 926
XceI	RCATGY	3 cut(s)	456, 872, 1156
XhoI	CTCGAG	2 cut(s)	1260, 2783
XmiI	GTMKAC	2 cut(s)	48, 807
XmnI	GAANNNNTTC	1 cut(s)	282
XspI	CTAG	8 cut(s)	578, 1310, 1562, 2522, 2543, 2594, 2645, 2744
ZrmI	AGTACT	1 cut(s)	1531

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.