Rh1CG118100

L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
25629419 .. 25635576
6158 bp
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UTR
Exon/CDS
Intron
Rh1CG118100.1

Sequence Viewer

Length: 513 bp
ATGTGCCATGTATACTGTGTTCTTTTTCAGGAATGTGATGAAGTTTGCGTGGATTTTCCCAATTTTAATTTCAATGTATCGCATCATGGTGACTATGTGGCTATAGCATCAGAACCTTTATGCCTTGTGGGGGTTGACATTGTTTCCATAGTCATTCCTCAGGATGAGACTGTCATAGAATTCCTTCAAAGCTTCTCCTCATACTTTTCAAGTTTTGAATGGCATAACATTTGCACTGCTGGCACAAACGATGATATGCTGATTGAGTTTTACAGATATTGGTGTCTGAAAGAAGCTTTTGTCAAAGCAATTGGGAGTGGACTGGCATATGATTTGGACAAAGTGGAATTTCATCACAGTTGCTGGGCAAACATTTCTGTTAACATTGAGGGCAAGGCTACAAGAGAGTGGCGCTTTTGGCTTCTAGAGTTGGGAAAGAATCATTTGGTATGTCCCTTTTATTTATTTATTTATTTTTTCCTTCCCTTTCATTTTGATCTGGTTTCATGCTAA

Protein Analysis

170

Amino Acids

19.83

Weight (kDa)

4.68

Isoelectric Point (pI)

51.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AASDHPPT_N PF22624 17 - 39 1.7e-06 4'-phosphopantetheinyl transferase, N-terminal
ACPS PF01648 43 - 148 1.4e-15 4'-phosphopantetheinyl transferase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015681)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 12
AcsI RAATTY 2 cut(s) 179, 347
AfiI CCNNNNNNNGG 1 cut(s) 130
AgsI TTSAA 4 cut(s) 73, 188, 210, 218
AjuI GAANNNNNNNTTGG 2 cut(s) 53, 85
AluBI AGCT 2 cut(s) 192, 296
AluI AGCT 2 cut(s) 192, 296
Alw26I GTCTC 1 cut(s) 161
AlwNI CAGNNNCTG 1 cut(s) 363
ApoI RAATTY 2 cut(s) 179, 347
Asp700I GAANNNNTTC 1 cut(s) 183
AspLEI GCGC 1 cut(s) 414
AsuHPI GGTGA 1 cut(s) 101
AxyI CCTNAGG 1 cut(s) 159
BcoDI GTCTC 1 cut(s) 161
BfaI CTAG 1 cut(s) 425
BfmI CTRYAG 1 cut(s) 102
BfoI RGCGCY 1 cut(s) 415
BmsI GCATC 2 cut(s) 91, 116
Bsc4I CCNNNNNNNGG 1 cut(s) 130
Bse1I ACTGG 1 cut(s) 327
Bse21I CCTNAGG 1 cut(s) 159
BseGI GGATG 1 cut(s) 169
BseLI CCNNNNNNNGG 1 cut(s) 130
BseMII CTCAG 1 cut(s) 173
BseNI ACTGG 1 cut(s) 327
BseRI GAGGAG 1 cut(s) 187
BseYI CCCAGC 1 cut(s) 363
BslFI GGGAC 1 cut(s) 438
BslI CCNNNNNNNGG 1 cut(s) 130
BsmAI GTCTC 1 cut(s) 161
BsmFI GGGAC 1 cut(s) 438
Bsp143I GATC 1 cut(s) 496
BspCNI CTCAG 1 cut(s) 172
BsrI ACTGG 1 cut(s) 327
BssMI GATC 1 cut(s) 496
BssNAI GTATAC 1 cut(s) 13
Bst1107I GTATAC 1 cut(s) 13
Bst4CI ACNGT 3 cut(s) 17, 172, 359
BstC8I GCNNGC 1 cut(s) 241
BstDEI CTNAG 1 cut(s) 159
BstF5I GGATG 1 cut(s) 169
BstH2I RGCGCY 1 cut(s) 415
BstHHI GCGC 1 cut(s) 414
BstKTI GATC 1 cut(s) 499
BstMAI GTCTC 1 cut(s) 161
BstMBI GATC 1 cut(s) 496
BstMWI GCNNNNNNNGC 2 cut(s) 240, 418
BstSFI CTRYAG 1 cut(s) 102
BstZ17I GTATAC 1 cut(s) 13
Bsu36I CCTNAGG 1 cut(s) 159
BtsCI GGATG 1 cut(s) 169
BtsI GCAGTG 1 cut(s) 234
BtsIMutI CAGTG 1 cut(s) 234
Cac8I GCNNGC 1 cut(s) 241
CaiI CAGNNNCTG 1 cut(s) 363
CfoI GCGC 1 cut(s) 414
CviAII CATG 3 cut(s) 8, 86, 507
CviJI RGCY 5 cut(s) 101, 192, 296, 398, 421
CviKI_1 RGCY 5 cut(s) 101, 192, 296, 398, 421
DdeI CTNAG 1 cut(s) 159
DpnI GATC 1 cut(s) 498
DpnII GATC 1 cut(s) 496
Eco81I CCTNAGG 1 cut(s) 159
EcoRI GAATTC 1 cut(s) 179
FaeI CATG 3 cut(s) 11, 89, 510
FaqI GGGAC 1 cut(s) 438
FatI CATG 3 cut(s) 7, 85, 506
FauNDI CATATG 1 cut(s) 328
FblI GTMKAC 1 cut(s) 12
FokI GGATG 1 cut(s) 176
FspBI CTAG 1 cut(s) 425
GlaI GCGC 1 cut(s) 413
GsaI CCCAGC 1 cut(s) 367
HaeII RGCGCY 1 cut(s) 415
HhaI GCGC 1 cut(s) 414
Hin1II CATG 3 cut(s) 11, 89, 510
Hin6I GCGC 1 cut(s) 412
HinP1I GCGC 1 cut(s) 412
HincII GTYRAC 2 cut(s) 136, 382
HindII GTYRAC 2 cut(s) 136, 382
HindIII AAGCTT 2 cut(s) 190, 294
HinfI GANTC 1 cut(s) 439
HpaI GTTAAC 1 cut(s) 382
HphI GGTGA 1 cut(s) 101
Hpy166II GTNNAC 4 cut(s) 13, 136, 320, 382
Hpy188I TCNGA 2 cut(s) 112, 288
Hpy188III TCNNGA 3 cut(s) 29, 161, 425
Hpy8I GTNNAC 4 cut(s) 13, 136, 320, 382
HpyAV CCTTC 2 cut(s) 194, 491
HpyCH4III ACNGT 3 cut(s) 17, 172, 359
HpyCH4V TGCA 1 cut(s) 234
HpyF10VI GCNNNNNNNGC 2 cut(s) 240, 418
HpyF3I CTNAG 1 cut(s) 159
Hsp92II CATG 3 cut(s) 11, 89, 510
HspAI GCGC 1 cut(s) 412
KspAI GTTAAC 1 cut(s) 382
Kzo9I GATC 1 cut(s) 496
LpnPI CCDG 6 cut(s) 14, 146, 225, 308, 349, 485
LweI GCATC 2 cut(s) 91, 116
MaeI CTAG 1 cut(s) 425
MaeIII GTNAC 1 cut(s) 89
MalI GATC 1 cut(s) 498
MboI GATC 1 cut(s) 496
MfeI CAATTG 1 cut(s) 309
MluCI AATT 5 cut(s) 61, 67, 179, 309, 347
MnlI CCTC 3 cut(s) 168, 208, 382
MroXI GAANNNNTTC 1 cut(s) 183
MseI TTAA 2 cut(s) 66, 381
MslI CAYNNNNRTG 1 cut(s) 87
MunI CAATTG 1 cut(s) 309
MwoI GCNNNNNNNGC 2 cut(s) 240, 418
NdeI CATATG 1 cut(s) 328
NdeII GATC 1 cut(s) 496
NlaIII CATG 3 cut(s) 11, 89, 510
NmuCI GTSAC 1 cut(s) 89
PdmI GAANNNNTTC 1 cut(s) 183
PfeI GAWTC 1 cut(s) 439
PspFI CCCAGC 1 cut(s) 363
PsrI GAACNNNNNNTAC 1 cut(s) 35
PstNI CAGNNNCTG 1 cut(s) 363
RseI CAYNNNNRTG 1 cut(s) 87
SaqAI TTAA 2 cut(s) 66, 381
Sau3AI GATC 1 cut(s) 496
SetI ASST 3 cut(s) 118, 194, 298
SfaNI GCATC 2 cut(s) 91, 116
SfcI CTRYAG 1 cut(s) 102
SmiMI CAYNNNNRTG 1 cut(s) 87
Sse9I AATT 5 cut(s) 61, 67, 179, 309, 347
SspMI CTAG 1 cut(s) 425
TaaI ACNGT 3 cut(s) 17, 172, 359
TasI AATT 5 cut(s) 61, 67, 179, 309, 347
TfiI GAWTC 1 cut(s) 439
Tru1I TTAA 2 cut(s) 66, 381
Tru9I TTAA 2 cut(s) 66, 381
TscAI CASTG 1 cut(s) 241
TseFI GTSAC 1 cut(s) 89
Tsp45I GTSAC 1 cut(s) 89
TspDTI ATGAA 4 cut(s) 54, 341, 479, 495
TspRI CASTG 1 cut(s) 241
XapI RAATTY 2 cut(s) 179, 347
XbaI TCTAGA 1 cut(s) 424
XmiI GTMKAC 1 cut(s) 12
XmnI GAANNNNTTC 1 cut(s) 183
XspI CTAG 1 cut(s) 425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.