Rorug01G0129100

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0017820
Physical Location & Seq
Forward (+)
21973262 .. 21982121
8860 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0129100.1

Sequence Viewer

Length: 2190 bp
ATGGTGTTTGACTGGTGGAGCATGCTAGATTTGAGCAGAAAGTCGAGGTCCTGGAACTGGTTACTGAGGGACTCGGCGGCCATGTTGAGGTCGGTCTGCATATGGAGCTTTCTGTCGGTGAATGATGTGTCGTTGCATTGGTCGGCGAGGGCCTTGAGGCGCTTGAGAGTGGAGAGGAGTTGGGGAGGAGAGAGTAGAGAAAGGGTTCTCAGCCCAGTGCGGGGAGTCGGAGATGTCAGCGACAGAGGTCTGGTGGGAGGCGAGCTTGGAGTAGAAGGATCGGACGGTGGTGCTCTACATTGGGGTCGGGTGGGTCGGGTTTGGGCTGAGGCTGGGTCGGAGACCCCTGCCGGCGCGAGACTCTTCAATCTTCACTTTTTCTCATCGGACGACGTCGTTTTGAAGTCTCGGAATGACAGACGCCTGTACAGATTAATCAAGCTCGAGAATGGCCTCACTGCACTGCTAGTTCACGATCCTGAGATTGGAGAATCCCGACTCTCCGAGGGCTCTGAGGAAGACGACGATAGTGAAGGAGGGGATGAAGATGAACTGAATAAGAAGAAAAAGGGAGGGGATTCTCGGACTAACATGGCAGCAGCAGCATTCTGTGTAGGAATAGGCAGCTTCTCTGACCCTCCTGAGGCACAGGGGCTTGCACACTTTCTAGAACACATGCTTTTCATGGGGAGTACAGAATTTCCAGATGAAAATGAGCTCTTTGTTTCACCCCTTGTAAAAAATGAAGCCATGGAGCGGGAGATTTTAACCAGGTTCTGCAGAACGGTGCTTGCCACCTTGAACAACTTCAATGCCATACAGCCTCACCTGGTCATCCTTTTAATAGATTCACATGAGTTGAGTATGCATGAAGGGAATAAAAAGAGCTTGAGTGATGCCATGGAAAAAGGGATCAACTTGCGGGAACAAATATTGAAATTGTACAGAGATTATTACCATGGTGGATTGATGAATCTAGTTGTAATAGGAGGAGAATCTCTTGATGTACTCGAGAATTGGGTTTTGGAATTGTTTGGTAAAGTCAAAAAAGGTCCCCCAGTAAATCTGGAAAACTTTGAAGGTCCAATTTGGAAAGCTGGAAAACTTTACAGGCTAGAGGCTGTTAAAGATGTTCGTATACTCCACTTAACATGGACATTGCCATGCCTTCGTCAAGACTATTTGAAGAAATCAGAAGATTATTTATCTCATCTCCTTGGGCATGAGGGCAGGGGAAGTTTGCATTCCTATTTCAAAGTTAAAGGGTGGGCAACATCTCTGGCTGCTGGTGTTGGGGATGACGGGATGCATCATTTTTTTTTTTTGGTTTATGTCTTTCGCATGGACATTCATCTCACTGACTCTGGATTGGATAAGATTTTTGATATAATTGGCTTGGTCTACCAATACATAAAGTTATTGCATCAAGTGTCCCCACAACAATGGATATTTAAGGAACTGCAGGATACTGGGAACATGGAATTTAGATTTGCAGAGGAGCAGCCTCAGGATGATTATATGCCTCAGAACTTGCAGGATTTCCAGTGCGAACCTTGGTTTGGGTCACATTATGCTGAGGAAGATGTATCTCCATCTTTGATAGATTTGTGGAAGGACCCTCCAGAAATTGATGTGTCATTGCATCTCCCAGAAAAGAATGAGTTCATTCCTACTGATTTTTCCATTTGTTCTGATGGTCTTGATACTACAGATACAGCTTCTCCGAGATGTATATTGGATGAGCCATTGGTGAAGTTCTGGTACAAACTTGATATATCCCTCCTCAAAGATAAGCTGAATGAGATTGCCTATCAGGCTAGTGTTGCCAAGCTGGAAACTTTGGTATCTGTATCGACTGACAAGCTGGAGCTAAAGGTCTACGGTTTCAATGACAAGCTTCCAGCTCTGTTGTCAAAGATTCTGAAAACAACCAAAAGTTTCATACCAATTTCTGATTGTTTTATGGAAGCAGAACGATTCAGAAGCATTCAGAAGGACGATGTCATGAACTGGTACAAAACAAATTTGCAACAGTCATCTCCCCAGTGTCGGAGACTGACTTGCAATTCGTGTTGGGGATGCGAAACAGACTTGAGATATGCTGAAGCACAGCTGGAGTCTGTACAAGTCATTGAAGACCTTGCAGCCTTTAAGATGCCTTTAAAATGCTCAGTTGTTGAAAATTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 RVT_3 zf-RVT

Protein Analysis

729

Amino Acids

82.98

Weight (kDa)

5.18

Isoelectric Point (pI)

38.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M16 PF00675 195 - 240 2e-10 Insulinase (Peptidase family M16)
Peptidase_M16_C PF05193 308 - 488 4.9e-17 Peptidase M16 inactive domain
Peptidase_M16_M PF16187 513 - 591 5.9e-19 Middle or third domain of peptidase_M16
Peptidase_M16_M PF16187 592 - 685 8.9e-17 Middle or third domain of peptidase_M16
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 396
AccBSI CCGCTC 1 cut(s) 757
AccI GTMKAC 3 cut(s) 1138, 1401, 1878
AccII CGCG 1 cut(s) 356
AciI CCGC 4 cut(s) 77, 220, 757, 922
AclWI GGATC 3 cut(s) 286, 470, 920
AcoI YGGCCR 1 cut(s) 78
AcsI RAATTY 4 cut(s) 698, 1481, 2023, 2182
AcuI CTGAAG 1 cut(s) 2124
AcyI GRCGYC 2 cut(s) 393, 421
AfaI GTAC 7 cut(s) 428, 694, 944, 1008, 1763, 2015, 2124
AfiI CCNNNNNNNGG 9 cut(s) 57, 87, 220, 221, 485, 643, 756, 1559, 2049
AjnI CCWGG 3 cut(s) 50, 770, 828
AjuI GAANNNNNNNTTGG 4 cut(s) 1007, 1039, 1542, 1574
Alw21I GWGCWC 2 cut(s) 295, 720
Alw26I GTCTC 4 cut(s) 335, 352, 411, 2047
AlwI GGATC 3 cut(s) 286, 470, 920
AlwNI CAGNNNCTG 1 cut(s) 777
Ama87I CYCGRG 2 cut(s) 443, 1010
AoxI GGCC 3 cut(s) 78, 150, 451
ApeKI GCWGC 7 cut(s) 596, 599, 602, 624, 1283, 1501, 2144
ApoI RAATTY 4 cut(s) 698, 1481, 2023, 2182
ArsI GACNNNNNNTTYG 2 cut(s) 2050, 2082
AseI ATTAAT 1 cut(s) 434
Asp700I GAANNNNTTC 3 cut(s) 204, 806, 1661
AspLEI GCGC 2 cut(s) 162, 356
AspS9I GGNCC 5 cut(s) 48, 150, 1052, 1082, 1615
AsuHPI GGTGA 4 cut(s) 130, 720, 818, 1762
AvaI CYCGRG 2 cut(s) 443, 1010
AvaII GGWCC 4 cut(s) 48, 1052, 1082, 1615
AxyI CCTNAGG 2 cut(s) 642, 1506
BaeI ACNNNNGTAYC 2 cut(s) 1827, 1860
BanII GRGCYC 2 cut(s) 512, 720
BarI GAAGNNNNNNTAC 2 cut(s) 1745, 1777
BbsI GAAGAC 2 cut(s) 525, 2142
Bbv12I GWGCWC 2 cut(s) 295, 720
BbvCI CCTCAGC 2 cut(s) 327, 1575
BbvI GCAGC 7 cut(s) 608, 611, 614, 636, 1270, 1513, 2156
BccI CCATC 2 cut(s) 1600, 1688
BciT130I CCWGG 3 cut(s) 52, 772, 830
BciVI GTATCC 1 cut(s) 1459
BcoDI GTCTC 4 cut(s) 335, 352, 411, 2047
BfaI CTAG 6 cut(s) 26, 467, 668, 977, 1115, 1818
BfmI CTRYAG 3 cut(s) 778, 1460, 1707
BfoI RGCGCY 1 cut(s) 163
BfuI GTATCC 1 cut(s) 1459
BglI GCCNNNNNGGC 1 cut(s) 1814
BisI GCNGC 8 cut(s) 78, 597, 600, 603, 625, 1284, 1502, 2145
BlsI GCNGC 8 cut(s) 79, 598, 601, 604, 626, 1285, 1503, 2146
Bme1390I CCNGG 3 cut(s) 52, 772, 830
Bme18I GGWCC 4 cut(s) 48, 1052, 1082, 1615
BmeT110I CYCGRG 2 cut(s) 443, 1010
BmgT120I GGNCC 5 cut(s) 48, 150, 1052, 1082, 1615
BmiI GGNNCC 2 cut(s) 1054, 1617
BmrFI CCNGG 3 cut(s) 52, 772, 830
BmrI ACTGGG 4 cut(s) 209, 1052, 1479, 2038
BmsI GCATC 7 cut(s) 886, 1296, 1318, 1432, 1651, 2069, 2145
BmuI ACTGGG 4 cut(s) 209, 1052, 1479, 2038
BoxI GACNNNNGTC 1 cut(s) 246
BpiI GAAGAC 2 cut(s) 525, 2142
BpmI CTGGAG 3 cut(s) 1605, 1886, 2135
Bpu10I CCTNAGC 2 cut(s) 327, 1575
BpuEI CTTGAG 4 cut(s) 175, 184, 910, 2113
BsaHI GRCGYC 2 cut(s) 393, 421
BsaI GGTCTC 1 cut(s) 335
BsaJI CCNNGG 6 cut(s) 504, 750, 900, 958, 1216, 1553
BsaXI ACNNNNNCTCC 2 cut(s) 1705, 1735
Bsc4I CCNNNNNNNGG 9 cut(s) 57, 87, 220, 221, 485, 643, 756, 1559, 2049
Bse118I RCCGGY 1 cut(s) 350
Bse1I ACTGG 8 cut(s) 17, 62, 215, 1058, 1474, 1543, 2015, 2044
Bse21I CCTNAGG 2 cut(s) 642, 1506
Bse3DI GCAATG 2 cut(s) 1157, 1637
BseBI CCWGG 3 cut(s) 52, 772, 830
BseDI CCNNGG 6 cut(s) 504, 750, 900, 958, 1216, 1553
BseGI GGATG 7 cut(s) 547, 834, 1303, 1311, 1516, 1744, 2084
BseLI CCNNNNNNNGG 9 cut(s) 57, 87, 220, 221, 485, 643, 756, 1559, 2049
BseMI GCAATG 2 cut(s) 1157, 1637
BseNI ACTGG 8 cut(s) 17, 62, 215, 1058, 1474, 1543, 2015, 2044
BseRI GAGGAG 5 cut(s) 190, 201, 1005, 1511, 1772
BseXI GCAGC 7 cut(s) 608, 611, 614, 636, 1270, 1513, 2156
BseYI CCCAGC 1 cut(s) 332
BsgI GTGCAG 1 cut(s) 444
Bsh1236I CGCG 1 cut(s) 356
BshFI GGCC 3 cut(s) 80, 152, 453
BsiHKAI GWGCWC 2 cut(s) 295, 720
BsiHKCI CYCGRG 2 cut(s) 443, 1010
BsiSI CCGG 1 cut(s) 351
BslFI GGGAC 3 cut(s) 83, 1038, 1417
BslI CCNNNNNNNGG 9 cut(s) 57, 87, 220, 221, 485, 643, 756, 1559, 2049
BsmAI GTCTC 4 cut(s) 335, 352, 411, 2047
BsmFI GGGAC 3 cut(s) 83, 1038, 1417
BsmI GAATGC 3 cut(s) 605, 1243, 1986
BsnI GGCC 3 cut(s) 80, 152, 453
Bso31I GGTCTC 1 cut(s) 335
BsoBI CYCGRG 2 cut(s) 443, 1010
Bsp1286I GDGCHC 3 cut(s) 295, 512, 720
Bsp1407I TGTACA 3 cut(s) 426, 942, 2122
Bsp143I GATC 3 cut(s) 278, 475, 912
Bsp19I CCATGG 3 cut(s) 750, 900, 958
BspACI CCGC 4 cut(s) 77, 220, 757, 922
BspANI GGCC 3 cut(s) 80, 152, 453
BspFNI CGCG 1 cut(s) 356
BspHI TCATGA 1 cut(s) 2004
BspLI GGNNCC 2 cut(s) 1054, 1617
BspMAI CTGCAG 2 cut(s) 782, 1464
BspPI GGATC 3 cut(s) 286, 470, 920
BspTNI GGTCTC 1 cut(s) 335
BsrBI CCGCTC 1 cut(s) 757
BsrDI GCAATG 2 cut(s) 1157, 1637
BsrFI RCCGGY 1 cut(s) 350
BsrGI TGTACA 3 cut(s) 426, 942, 2122
BsrI ACTGG 8 cut(s) 17, 62, 215, 1058, 1474, 1543, 2015, 2044
BssAI RCCGGY 1 cut(s) 350
BssECI CCNNGG 6 cut(s) 504, 750, 900, 958, 1216, 1553
BssMI GATC 3 cut(s) 278, 475, 912
BssNAI GTATAC 1 cut(s) 1139
BssNI GRCGYC 2 cut(s) 393, 421
BssT1I CCWWGG 5 cut(s) 750, 900, 958, 1216, 1553
Bst1107I GTATAC 1 cut(s) 1139
Bst2UI CCWGG 3 cut(s) 52, 772, 830
Bst4CI ACNGT 4 cut(s) 287, 787, 1883, 2034
Bst6I CTCTTC 1 cut(s) 368
BstACI GRCGYC 2 cut(s) 393, 421
BstAUI TGTACA 3 cut(s) 426, 942, 2122
BstC8I GCNNGC 5 cut(s) 23, 263, 352, 657, 792
BstDSI CCRYGG 3 cut(s) 750, 900, 958
BstF5I GGATG 7 cut(s) 547, 834, 1303, 1311, 1516, 1744, 2084
BstFNI CGCG 1 cut(s) 356
BstH2I RGCGCY 1 cut(s) 163
BstHHI GCGC 2 cut(s) 162, 356
BstKTI GATC 3 cut(s) 281, 478, 915
BstMAI GTCTC 4 cut(s) 335, 352, 411, 2047
BstMBI GATC 3 cut(s) 278, 475, 912
BstMWI GCNNNNNNNGC 4 cut(s) 105, 602, 1814, 1823
BstNI CCWGG 3 cut(s) 52, 772, 830
BstNSI RCATGY 2 cut(s) 25, 679
BstPAI GACNNNNGTC 1 cut(s) 246
BstSCI CCNGG 3 cut(s) 50, 770, 828
BstSFI CTRYAG 3 cut(s) 778, 1460, 1707
BstUI CGCG 1 cut(s) 356
BstV1I GCAGC 7 cut(s) 608, 611, 614, 636, 1270, 1513, 2156
BstV2I GAAGAC 2 cut(s) 525, 2142
BstXI CCANNNNNNTGG 1 cut(s) 1443
BstZ17I GTATAC 1 cut(s) 1139
Bsu36I CCTNAGG 2 cut(s) 642, 1506
BsuI GTATCC 1 cut(s) 1459
BsuRI GGCC 3 cut(s) 80, 152, 453
BtgI CCRYGG 3 cut(s) 750, 900, 958
BtsCI GGATG 7 cut(s) 547, 834, 1303, 1311, 1516, 1744, 2084
BtsI GCAGTG 2 cut(s) 456, 461
BtsIMutI CAGTG 6 cut(s) 222, 456, 461, 1356, 1550, 2051
Cac8I GCNNGC 5 cut(s) 23, 263, 352, 657, 792
CaiI CAGNNNCTG 1 cut(s) 777
CciI TCATGA 1 cut(s) 2004
CfoI GCGC 2 cut(s) 162, 356
Cfr10I RCCGGY 1 cut(s) 350
Cfr13I GGNCC 5 cut(s) 48, 150, 1052, 1082, 1615
CseI GACGC 1 cut(s) 429
CsiI ACCWGGT 2 cut(s) 770, 828
Csp6I GTAC 7 cut(s) 427, 693, 943, 1007, 1762, 2014, 2123
CviQI GTAC 7 cut(s) 427, 693, 943, 1007, 1762, 2014, 2123
DpnI GATC 3 cut(s) 280, 477, 914
DpnII GATC 3 cut(s) 278, 475, 912
DraI TTTAAA 1 cut(s) 2163
EaeI YGGCCR 1 cut(s) 78
Eam1104I CTCTTC 1 cut(s) 368
EarI CTCTTC 1 cut(s) 368
Ecl136II GAGCTC 1 cut(s) 718
Eco130I CCWWGG 5 cut(s) 750, 900, 958, 1216, 1553
Eco24I GRGCYC 2 cut(s) 512, 720
Eco31I GGTCTC 1 cut(s) 335
Eco47I GGWCC 4 cut(s) 48, 1052, 1082, 1615
Eco53kI GAGCTC 1 cut(s) 718
Eco57I CTGAAG 1 cut(s) 2124
Eco81I CCTNAGG 2 cut(s) 642, 1506
Eco88I CYCGRG 2 cut(s) 443, 1010
EcoICRI GAGCTC 1 cut(s) 718
EcoO109I RGGNCCY 4 cut(s) 48, 150, 1052, 1615
EcoRII CCWGG 3 cut(s) 50, 770, 828
EcoT14I CCWWGG 5 cut(s) 750, 900, 958, 1216, 1553
EcoT22I ATGCAT 2 cut(s) 870, 1311
EcoT38I GRGCYC 2 cut(s) 512, 720
ErhI CCWWGG 5 cut(s) 750, 900, 958, 1216, 1553
FaqI GGGAC 3 cut(s) 83, 1038, 1417
FauI CCCGC 3 cut(s) 213, 750, 915
FauNDI CATATG 1 cut(s) 101
FblI GTMKAC 3 cut(s) 1138, 1401, 1878
Fnu4HI GCNGC 8 cut(s) 78, 597, 600, 603, 625, 1284, 1502, 2145
FokI GGATG 7 cut(s) 554, 821, 1310, 1318, 1523, 1751, 2091
FriOI GRGCYC 2 cut(s) 512, 720
Fsp4HI GCNGC 8 cut(s) 78, 597, 600, 603, 625, 1284, 1502, 2145
FspBI CTAG 6 cut(s) 26, 467, 668, 977, 1115, 1818
GlaI GCGC 2 cut(s) 161, 355
GluI GCNGC 8 cut(s) 78, 597, 600, 603, 625, 1284, 1502, 2145
GsaI CCCAGC 1 cut(s) 336
GsuI CTGGAG 3 cut(s) 1605, 1886, 2135
HaeII RGCGCY 1 cut(s) 163
HaeIII GGCC 3 cut(s) 80, 152, 453
HapII CCGG 1 cut(s) 351
HgaI GACGC 1 cut(s) 429
HhaI GCGC 2 cut(s) 162, 356
Hin1I GRCGYC 2 cut(s) 393, 421
Hin6I GCGC 2 cut(s) 160, 354
HinP1I GCGC 2 cut(s) 160, 354
HindIII AAGCTT 1 cut(s) 1895
HpaII CCGG 1 cut(s) 351
HphI GGTGA 4 cut(s) 130, 720, 818, 1762
Hpy166II GTNNAC 4 cut(s) 472, 1139, 1402, 1879
Hpy8I GTNNAC 4 cut(s) 472, 1139, 1402, 1879
Hpy99I CGWCG 3 cut(s) 395, 398, 527
HpyAV CCTTC 7 cut(s) 269, 527, 866, 1073, 1178, 1606, 1987
HpyCH4III ACNGT 4 cut(s) 287, 787, 1883, 2034
HpyCH4IV ACGT 1 cut(s) 393
HpyF10VI GCNNNNNNNGC 4 cut(s) 105, 602, 1814, 1823
HpySE526I ACGT 1 cut(s) 393
Hsp92I GRCGYC 2 cut(s) 393, 421
HspAI GCGC 2 cut(s) 160, 354
KroI GCCGGC 1 cut(s) 350
KroNI GCCGGC 1 cut(s) 352
Kzo9I GATC 3 cut(s) 278, 475, 912
LmnI GCTCC 5 cut(s) 18, 105, 754, 1498, 1867
Lsp1109I GCAGC 7 cut(s) 608, 611, 614, 636, 1270, 1513, 2156
LweI GCATC 7 cut(s) 886, 1296, 1318, 1432, 1651, 2069, 2145
MabI ACCWGGT 2 cut(s) 770, 828
MaeI CTAG 6 cut(s) 26, 467, 668, 977, 1115, 1818
MaeII ACGT 1 cut(s) 393
MaeIII GTNAC 2 cut(s) 60, 1563
MalI GATC 3 cut(s) 280, 477, 914
MbiI CCGCTC 1 cut(s) 757
MboI GATC 3 cut(s) 278, 475, 912
MboII GAAGA 9 cut(s) 355, 362, 530, 557, 574, 1198, 1208, 1592, 2147
MhlI GDGCHC 3 cut(s) 295, 512, 720
MlyI GAGTC 6 cut(s) 65, 234, 354, 492, 1355, 2126
MmeI TCCRAC 3 cut(s) 208, 318, 2030
Mph1103I ATGCAT 2 cut(s) 870, 1311
MroNI GCCGGC 1 cut(s) 350
MroXI GAANNNNTTC 3 cut(s) 204, 806, 1661
MseI TTAA 9 cut(s) 434, 767, 842, 1125, 1148, 1260, 1452, 2151, 2162
MslI CAYNNNNRTG 2 cut(s) 1162, 1441
MspA1I CMGCKG 1 cut(s) 2113
MspI CCGG 1 cut(s) 351
MspR9I CCNGG 3 cut(s) 52, 772, 830
Mva1269I GAATGC 3 cut(s) 605, 1243, 1986
MvaI CCWGG 3 cut(s) 52, 772, 830
MvnI CGCG 1 cut(s) 356
MwoI GCNNNNNNNGC 4 cut(s) 105, 602, 1814, 1823
NaeI GCCGGC 1 cut(s) 352
NcoI CCATGG 3 cut(s) 750, 900, 958
NdeI CATATG 1 cut(s) 101
NdeII GATC 3 cut(s) 278, 475, 912
NgoMIV GCCGGC 1 cut(s) 350
NlaIV GGNNCC 2 cut(s) 1054, 1617
NmeAIII GCCGAG 1 cut(s) 53
NmuCI GTSAC 1 cut(s) 1563
NsiI ATGCAT 2 cut(s) 870, 1311
NspI RCATGY 2 cut(s) 25, 679
PaeI GCATGC 1 cut(s) 25
PaeR7I CTCGAG 2 cut(s) 443, 1010
PagI TCATGA 1 cut(s) 2004
PctI GAATGC 3 cut(s) 605, 1243, 1986
PdiI GCCGGC 1 cut(s) 352
PdmI GAANNNNTTC 3 cut(s) 204, 806, 1661
PfeI GAWTC 7 cut(s) 491, 578, 848, 973, 995, 1918, 1977
PflFI GACNNNGTC 2 cut(s) 392, 2000
PfoI TCCNGGA 1 cut(s) 50
PkrI GCNGC 8 cut(s) 79, 598, 601, 604, 626, 1285, 1503, 2146
PleI GAGTC 6 cut(s) 65, 233, 354, 492, 1355, 2125
PpsI GAGTC 6 cut(s) 65, 233, 354, 492, 1355, 2125
PpuMI RGGWCCY 3 cut(s) 48, 1052, 1615
PshAI GACNNNNGTC 1 cut(s) 246
PshBI ATTAAT 1 cut(s) 434
Psp124BI GAGCTC 1 cut(s) 720
Psp5II RGGWCCY 3 cut(s) 48, 1052, 1615
Psp6I CCWGG 3 cut(s) 50, 770, 828
PspFI CCCAGC 1 cut(s) 332
PspGI CCWGG 3 cut(s) 50, 770, 828
PspN4I GGNNCC 2 cut(s) 1054, 1617
PspPI GGNCC 5 cut(s) 48, 150, 1052, 1082, 1615
PspPPI RGGWCCY 3 cut(s) 48, 1052, 1615
PstI CTGCAG 2 cut(s) 782, 1464
PstNI CAGNNNCTG 1 cut(s) 777
PsyI GACNNNGTC 2 cut(s) 392, 2000
PvuII CAGCTG 1 cut(s) 2113
RsaI GTAC 7 cut(s) 428, 694, 944, 1008, 1763, 2015, 2124
RsaNI GTAC 7 cut(s) 427, 693, 943, 1007, 1762, 2014, 2123
RseI CAYNNNNRTG 2 cut(s) 1162, 1441
SacI GAGCTC 1 cut(s) 720
SaqAI TTAA 9 cut(s) 434, 767, 842, 1125, 1148, 1260, 1452, 2151, 2162
SatI GCNGC 8 cut(s) 78, 597, 600, 603, 625, 1284, 1502, 2145
Sau3AI GATC 3 cut(s) 278, 475, 912
Sau96I GGNCC 5 cut(s) 48, 150, 1052, 1082, 1615
SchI GAGTC 6 cut(s) 65, 234, 354, 492, 1355, 2126
ScrFI CCNGG 3 cut(s) 52, 772, 830
SduI GDGCHC 3 cut(s) 295, 512, 720
SexAI ACCWGGT 2 cut(s) 770, 828
SfaNI GCATC 7 cut(s) 886, 1296, 1318, 1432, 1651, 2069, 2145
SfcI CTRYAG 3 cut(s) 778, 1460, 1707
Sfr274I CTCGAG 2 cut(s) 443, 1010
SinI GGWCC 4 cut(s) 48, 1052, 1082, 1615
SlaI CTCGAG 2 cut(s) 443, 1010
SmiMI CAYNNNNRTG 2 cut(s) 1162, 1441
SmlI CTYRAG 6 cut(s) 154, 163, 443, 889, 1010, 2092
SmoI CTYRAG 6 cut(s) 154, 163, 443, 889, 1010, 2092
SphI GCATGC 1 cut(s) 25
SsiI CCGC 4 cut(s) 77, 220, 757, 922
SspI AATATT 1 cut(s) 933
SspMI CTAG 6 cut(s) 26, 467, 668, 977, 1115, 1818
SstI GAGCTC 1 cut(s) 720
StyD4I CCNGG 3 cut(s) 50, 770, 828
StyI CCWWGG 5 cut(s) 750, 900, 958, 1216, 1553
TaaI ACNGT 4 cut(s) 287, 787, 1883, 2034
TaiI ACGT 1 cut(s) 396
TaqI TCGA 4 cut(s) 44, 444, 1011, 1853
TaqII GACCGA 1 cut(s) 82
TatI WGTACW 5 cut(s) 426, 692, 942, 1006, 2122
TauI GCSGC 1 cut(s) 80
TfiI GAWTC 7 cut(s) 491, 578, 848, 973, 995, 1918, 1977
Tru1I TTAA 9 cut(s) 434, 767, 842, 1125, 1148, 1260, 1452, 2151, 2162
Tru9I TTAA 9 cut(s) 434, 767, 842, 1125, 1148, 1260, 1452, 2151, 2162
TscAI CASTG 6 cut(s) 222, 463, 468, 1363, 1550, 2051
TseFI GTSAC 1 cut(s) 1563
TseI GCWGC 7 cut(s) 596, 599, 602, 624, 1283, 1501, 2144
Tsp45I GTSAC 1 cut(s) 1563
TspRI CASTG 6 cut(s) 222, 463, 468, 1363, 1550, 2051
Tth111I GACNNNGTC 2 cut(s) 392, 2000
VpaK11BI GGWCC 4 cut(s) 48, 1052, 1082, 1615
VspI ATTAAT 1 cut(s) 434
XapI RAATTY 4 cut(s) 698, 1481, 2023, 2182
XbaI TCTAGA 1 cut(s) 667
XceI RCATGY 2 cut(s) 25, 679
XhoI CTCGAG 2 cut(s) 443, 1010
XmiI GTMKAC 3 cut(s) 1138, 1401, 1878
XmnI GAANNNNTTC 3 cut(s) 204, 806, 1661
XspI CTAG 6 cut(s) 26, 467, 668, 977, 1115, 1818
ZraI GACGTC 1 cut(s) 394
Zsp2I ATGCAT 2 cut(s) 870, 1311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.