Rh5BG446100

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Reverse (-)
71538839 .. 71542961
4123 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG446100.1

Sequence Viewer

Length: 216 bp
ATGTCAGCCCTCTACTGGAATGCCCGTGGCATCGCAAATGATGACACACAGAGGGCTCTTAAGCACATGAGAAGGATCGGAAATCGCGTAGGAGACAGGTTGGCATCGTACGGAGCAAGTCATATGGGTAATATTTGGTGGGAGGCTCTTCCAGATTTTATTGCTGATATTTATGGTGGTGATCTTATTTCTTCAGTATTCTATTGTGTTTCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

71

Amino Acids

7.99

Weight (kDa)

6.7

Isoelectric Point (pI)

21.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 87
AclWI GGATC 1 cut(s) 83
AcuI CTGAAG 1 cut(s) 177
AfaI GTAC 1 cut(s) 110
AfiI CCNNNNNNNGG 1 cut(s) 15
AflII CTTAAG 1 cut(s) 59
Alw26I GTCTC 1 cut(s) 87
AlwI GGATC 1 cut(s) 83
AsuHPI GGTGA 1 cut(s) 191
BanII GRGCYC 1 cut(s) 58
BcoDI GTCTC 1 cut(s) 87
BfrI CTTAAG 1 cut(s) 59
BmsI GCATC 2 cut(s) 39, 113
BsaJI CCNNGG 1 cut(s) 25
Bsc4I CCNNNNNNNGG 1 cut(s) 15
Bse1I ACTGG 1 cut(s) 20
BseDI CCNNGG 1 cut(s) 25
BseLI CCNNNNNNNGG 1 cut(s) 15
BseNI ACTGG 1 cut(s) 20
Bsh1236I CGCG 1 cut(s) 87
BsiWI CGTACG 1 cut(s) 108
BslI CCNNNNNNNGG 1 cut(s) 15
BsmAI GTCTC 1 cut(s) 87
BsmI GAATGC 1 cut(s) 25
Bsp1286I GDGCHC 1 cut(s) 58
Bsp143I GATC 2 cut(s) 75, 181
BspFNI CGCG 1 cut(s) 87
BspPI GGATC 1 cut(s) 83
BspQI GCTCTTC 1 cut(s) 153
BspTI CTTAAG 1 cut(s) 59
BsrI ACTGG 1 cut(s) 20
BssECI CCNNGG 1 cut(s) 25
BssMI GATC 2 cut(s) 75, 181
Bst6I CTCTTC 1 cut(s) 153
BstAFI CTTAAG 1 cut(s) 59
BstDSI CCRYGG 1 cut(s) 25
BstFNI CGCG 1 cut(s) 87
BstKTI GATC 2 cut(s) 78, 184
BstMAI GTCTC 1 cut(s) 87
BstMBI GATC 2 cut(s) 75, 181
BstUI CGCG 1 cut(s) 87
BtgI CCRYGG 1 cut(s) 25
BtgZI GCGATG 1 cut(s) 16
Csp6I GTAC 1 cut(s) 109
CviAII CATG 1 cut(s) 67
CviJI RGCY 3 cut(s) 8, 56, 146
CviKI_1 RGCY 3 cut(s) 8, 56, 146
CviQI GTAC 1 cut(s) 109
DpnI GATC 2 cut(s) 77, 183
DpnII GATC 2 cut(s) 75, 181
Eam1104I CTCTTC 1 cut(s) 153
EarI CTCTTC 1 cut(s) 153
Eco24I GRGCYC 1 cut(s) 58
Eco57I CTGAAG 1 cut(s) 177
EcoT38I GRGCYC 1 cut(s) 58
FaeI CATG 1 cut(s) 70
FaiI YATR 4 cut(s) 68, 123, 125, 174
FatI CATG 1 cut(s) 66
FauNDI CATATG 1 cut(s) 123
FriOI GRGCYC 1 cut(s) 58
Hin1II CATG 1 cut(s) 70
HphI GGTGA 1 cut(s) 191
Hpy188I TCNGA 1 cut(s) 80
Hpy188III TCNNGA 1 cut(s) 152
HpyAV CCTTC 1 cut(s) 66
Hsp92II CATG 1 cut(s) 70
Kzo9I GATC 2 cut(s) 75, 181
LguI GCTCTTC 1 cut(s) 153
LmnI GCTCC 1 cut(s) 113
LpnPI CCDG 2 cut(s) 82, 165
LweI GCATC 2 cut(s) 39, 113
MalI GATC 2 cut(s) 77, 183
MboI GATC 2 cut(s) 75, 181
MboII GAAGA 2 cut(s) 140, 183
MhlI GDGCHC 1 cut(s) 58
MnlI CCTC 3 cut(s) 20, 45, 136
MseI TTAA 1 cut(s) 60
MspCI CTTAAG 1 cut(s) 59
Mva1269I GAATGC 1 cut(s) 25
MvnI CGCG 1 cut(s) 87
NdeI CATATG 1 cut(s) 123
NdeII GATC 2 cut(s) 75, 181
NlaIII CATG 1 cut(s) 70
PciSI GCTCTTC 1 cut(s) 153
PcsI WCGNNNNNNNCGW 1 cut(s) 84
PctI GAATGC 1 cut(s) 25
Pfl23II CGTACG 1 cut(s) 108
PspLI CGTACG 1 cut(s) 108
RsaI GTAC 1 cut(s) 110
RsaNI GTAC 1 cut(s) 109
SapI GCTCTTC 1 cut(s) 153
SaqAI TTAA 1 cut(s) 60
Sau3AI GATC 2 cut(s) 75, 181
SduI GDGCHC 1 cut(s) 58
SetI ASST 1 cut(s) 101
SfaNI GCATC 2 cut(s) 39, 113
SgeI CNNG 8 cut(s) 28, 36, 38, 79, 98, 109, 129, 164
SmlI CTYRAG 1 cut(s) 59
SmoI CTYRAG 1 cut(s) 59
SspI AATATT 1 cut(s) 133
Tru1I TTAA 1 cut(s) 60
Tru9I TTAA 1 cut(s) 60
TspGWI ACGGA 1 cut(s) 126
Vha464I CTTAAG 1 cut(s) 59
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.