Chloroplastic group IIB intron splicing facilitator
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 419 |
| Acc65I | GGTACC | 1 cut(s) | 200 |
| AccB1I | GGYRCC | 2 cut(s) | 43, 200 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 461 |
| AccI | GTMKAC | 2 cut(s) | 1356, 2154 |
| AccII | CGCG | 2 cut(s) | 307, 1518 |
| AciI | CCGC | 5 cut(s) | 305, 307, 1167, 1280, 1743 |
| AclI | AACGTT | 1 cut(s) | 21 |
| AclWI | GGATC | 4 cut(s) | 279, 284, 776, 1126 |
| AcoI | YGGCCR | 3 cut(s) | 1294, 1835, 2002 |
| AcsI | RAATTY | 3 cut(s) | 433, 467, 499 |
| AcuI | CTGAAG | 1 cut(s) | 933 |
| AcvI | CACGTG | 1 cut(s) | 257 |
| AdeI | CACNNNGTG | 1 cut(s) | 2014 |
| AfaI | GTAC | 6 cut(s) | 202, 242, 814, 904, 968, 1657 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 461, 1178, 1292, 1937 |
| AflIII | ACRYGT | 1 cut(s) | 1788 |
| AgeI | ACCGGT | 1 cut(s) | 203 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1696 |
| AjnI | CCWGG | 7 cut(s) | 385, 494, 1935, 1963, 1968, 1999, 2122 |
| Alw21I | GWGCWC | 4 cut(s) | 992, 1213, 1234, 1333 |
| Alw26I | GTCTC | 5 cut(s) | 159, 369, 395, 484, 778 |
| Alw44I | GTGCAC | 3 cut(s) | 988, 1209, 1329 |
| AlwI | GGATC | 4 cut(s) | 279, 284, 776, 1126 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 521, 776, 1184, 1924, 2123 |
| Ama87I | CYCGRG | 1 cut(s) | 156 |
| ApaI | GGGCCC | 2 cut(s) | 1072, 1286 |
| ApaLI | GTGCAC | 3 cut(s) | 988, 1209, 1329 |
| ApeKI | GCWGC | 8 cut(s) | 281, 521, 887, 890, 1745, 1814, 1918, 1921 |
| ApoI | RAATTY | 3 cut(s) | 433, 467, 499 |
| AsiGI | ACCGGT | 1 cut(s) | 203 |
| Asp718I | GGTACC | 1 cut(s) | 200 |
| AspLEI | GCGC | 1 cut(s) | 1584 |
| AsuHPI | GGTGA | 8 cut(s) | 218, 593, 887, 1202, 1273, 1358, 1448, 1699 |
| AvaI | CYCGRG | 1 cut(s) | 156 |
| AvaII | GGWCC | 4 cut(s) | 605, 1169, 1928, 2186 |
| BaeGI | GKGCMC | 5 cut(s) | 992, 1072, 1213, 1286, 1333 |
| BalI | TGGCCA | 1 cut(s) | 2004 |
| BanI | GGYRCC | 2 cut(s) | 43, 200 |
| BanII | GRGCYC | 3 cut(s) | 1072, 1234, 1286 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1542, 1574 |
| BbrPI | CACGTG | 1 cut(s) | 257 |
| BbsI | GAAGAC | 1 cut(s) | 415 |
| Bbv12I | GWGCWC | 4 cut(s) | 992, 1213, 1234, 1333 |
| BbvCI | CCTCAGC | 1 cut(s) | 141 |
| BbvI | GCAGC | 8 cut(s) | 293, 508, 874, 877, 1732, 1801, 1930, 1933 |
| BccI | CCATC | 7 cut(s) | 86, 911, 916, 1181, 1427, 1562, 1852 |
| BceAI | ACGGC | 1 cut(s) | 1309 |
| BciT130I | CCWGG | 7 cut(s) | 387, 496, 1937, 1965, 1970, 2001, 2124 |
| BcoDI | GTCTC | 5 cut(s) | 159, 369, 395, 484, 778 |
| BfaI | CTAG | 4 cut(s) | 126, 410, 1524, 1806 |
| BfmI | CTRYAG | 1 cut(s) | 777 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1782 |
| BglII | AGATCT | 1 cut(s) | 329 |
| BisI | GCNGC | 8 cut(s) | 282, 522, 888, 891, 1746, 1815, 1919, 1922 |
| BlpI | GCTNAGC | 1 cut(s) | 1906 |
| BlsI | GCNGC | 8 cut(s) | 283, 523, 889, 892, 1747, 1816, 1920, 1923 |
| BmcAI | AGTACT | 1 cut(s) | 814 |
| Bme1390I | CCNGG | 7 cut(s) | 387, 496, 1937, 1965, 1970, 2001, 2124 |
| Bme18I | GGWCC | 4 cut(s) | 605, 1169, 1928, 2186 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1696 |
| BmeT110I | CYCGRG | 1 cut(s) | 156 |
| BmiI | GGNNCC | 8 cut(s) | 45, 202, 678, 1069, 1070, 1111, 1284, 1929 |
| BmrFI | CCNGG | 7 cut(s) | 387, 496, 1937, 1965, 1970, 2001, 2124 |
| BmrI | ACTGGG | 1 cut(s) | 49 |
| BmsI | GCATC | 5 cut(s) | 1003, 1283, 1370, 1691, 1811 |
| BmuI | ACTGGG | 1 cut(s) | 49 |
| BpiI | GAAGAC | 1 cut(s) | 415 |
| BpmI | CTGGAG | 1 cut(s) | 704 |
| Bpu10I | CCTNAGC | 1 cut(s) | 141 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1906 |
| BpuEI | CTTGAG | 3 cut(s) | 88, 1277, 1679 |
| BsaAI | YACGTR | 1 cut(s) | 257 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1191, 1572 |
| BsaI | GGTCTC | 3 cut(s) | 159, 369, 395 |
| BsaJI | CCNNGG | 9 cut(s) | 62, 305, 385, 785, 882, 1622, 1935, 1936, 2182 |
| BsaWI | WCCGGW | 1 cut(s) | 203 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 137, 167 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 461, 1178, 1292, 1937 |
| Bse118I | RCCGGY | 1 cut(s) | 203 |
| Bse1I | ACTGG | 5 cut(s) | 44, 466, 1228, 1330, 1545 |
| Bse3DI | GCAATG | 1 cut(s) | 1989 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1191, 1572 |
| BseBI | CCWGG | 7 cut(s) | 387, 496, 1937, 1965, 1970, 2001, 2124 |
| BseDI | CCNNGG | 9 cut(s) | 62, 305, 385, 785, 882, 1622, 1935, 1936, 2182 |
| BseGI | GGATG | 7 cut(s) | 19, 994, 1156, 1393, 1682, 1825, 2035 |
| BseJI | GATNNNNATC | 2 cut(s) | 1191, 1572 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 461, 1178, 1292, 1937 |
| BseMI | GCAATG | 1 cut(s) | 1989 |
| BseMII | CTCAG | 4 cut(s) | 132, 406, 666, 1334 |
| BseNI | ACTGG | 5 cut(s) | 44, 466, 1228, 1330, 1545 |
| BseRI | GAGGAG | 1 cut(s) | 158 |
| BseSI | GKGCMC | 5 cut(s) | 992, 1072, 1213, 1286, 1333 |
| BseXI | GCAGC | 8 cut(s) | 293, 508, 874, 877, 1732, 1801, 1930, 1933 |
| BseYI | CCCAGC | 3 cut(s) | 629, 1924, 1988 |
| BsgI | GTGCAG | 1 cut(s) | 1800 |
| Bsh1236I | CGCG | 2 cut(s) | 307, 1518 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1148 |
| BshNI | GGYRCC | 2 cut(s) | 43, 200 |
| BshTI | ACCGGT | 1 cut(s) | 203 |
| BsiEI | CGRYCG | 1 cut(s) | 1148 |
| BsiHKAI | GWGCWC | 4 cut(s) | 992, 1213, 1234, 1333 |
| BsiHKCI | CYCGRG | 1 cut(s) | 156 |
| BsiSI | CCGG | 1 cut(s) | 204 |
| BslFI | GGGAC | 3 cut(s) | 50, 80, 276 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 461, 1178, 1292, 1937 |
| BsmAI | GTCTC | 5 cut(s) | 159, 369, 395, 484, 778 |
| BsmFI | GGGAC | 3 cut(s) | 50, 80, 276 |
| BsmI | GAATGC | 1 cut(s) | 706 |
| Bso31I | GGTCTC | 3 cut(s) | 159, 369, 395 |
| BsoBI | CYCGRG | 1 cut(s) | 156 |
| Bsp120I | GGGCCC | 2 cut(s) | 1068, 1282 |
| Bsp1286I | GDGCHC | 6 cut(s) | 992, 1072, 1213, 1234, 1286, 1333 |
| Bsp1407I | TGTACA | 1 cut(s) | 1655 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1906 |
| Bsp19I | CCATGG | 1 cut(s) | 882 |
| Bsp68I | TCGCGA | 1 cut(s) | 1518 |
| BspACI | CCGC | 5 cut(s) | 305, 307, 1167, 1280, 1743 |
| BspCNI | CTCAG | 4 cut(s) | 133, 405, 665, 1333 |
| BspFNI | CGCG | 2 cut(s) | 307, 1518 |
| BspHI | TCATGA | 2 cut(s) | 1033, 1732 |
| BspLI | GGNNCC | 8 cut(s) | 45, 202, 678, 1069, 1070, 1111, 1284, 1929 |
| BspMAI | CTGCAG | 1 cut(s) | 781 |
| BspPI | GGATC | 4 cut(s) | 279, 284, 776, 1126 |
| BspT107I | GGYRCC | 2 cut(s) | 43, 200 |
| BspTNI | GGTCTC | 3 cut(s) | 159, 369, 395 |
| BsrDI | GCAATG | 1 cut(s) | 1989 |
| BsrFI | RCCGGY | 1 cut(s) | 203 |
| BsrGI | TGTACA | 1 cut(s) | 1655 |
| BsrI | ACTGG | 5 cut(s) | 44, 466, 1228, 1330, 1545 |
| BssAI | RCCGGY | 1 cut(s) | 203 |
| BssECI | CCNNGG | 9 cut(s) | 62, 305, 385, 785, 882, 1622, 1935, 1936, 2182 |
| BssNAI | GTATAC | 1 cut(s) | 2155 |
| BssT1I | CCWWGG | 4 cut(s) | 62, 882, 1622, 2182 |
| Bst1107I | GTATAC | 1 cut(s) | 2155 |
| Bst2UI | CCWGG | 7 cut(s) | 387, 496, 1937, 1965, 1970, 2001, 2124 |
| Bst4CI | ACNGT | 4 cut(s) | 772, 802, 1660, 1859 |
| Bst6I | CTCTTC | 2 cut(s) | 82, 667 |
| BstAUI | TGTACA | 1 cut(s) | 1655 |
| BstBAI | YACGTR | 1 cut(s) | 257 |
| BstC8I | GCNNGC | 8 cut(s) | 7, 617, 992, 1282, 1298, 1317, 1520, 1750 |
| BstDEI | CTNAG | 5 cut(s) | 141, 392, 652, 1320, 1906 |
| BstDSI | CCRYGG | 2 cut(s) | 305, 882 |
| BstF5I | GGATG | 7 cut(s) | 19, 994, 1156, 1393, 1682, 1825, 2035 |
| BstFNI | CGCG | 2 cut(s) | 307, 1518 |
| BstHHI | GCGC | 1 cut(s) | 1584 |
| BstMAI | GTCTC | 5 cut(s) | 159, 369, 395, 484, 778 |
| BstMCI | CGRYCG | 1 cut(s) | 1148 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 287, 530, 1217, 1508, 1758, 1782, 1979 |
| BstNI | CCWGG | 7 cut(s) | 387, 496, 1937, 1965, 1970, 2001, 2124 |
| BstNSI | RCATGY | 3 cut(s) | 1144, 1673, 1792 |
| BstSCI | CCNGG | 7 cut(s) | 385, 494, 1935, 1963, 1968, 1999, 2122 |
| BstSFI | CTRYAG | 1 cut(s) | 777 |
| BstSLI | GKGCMC | 5 cut(s) | 992, 1072, 1213, 1286, 1333 |
| BstUI | CGCG | 2 cut(s) | 307, 1518 |
| BstV1I | GCAGC | 8 cut(s) | 293, 508, 874, 877, 1732, 1801, 1930, 1933 |
| BstV2I | GAAGAC | 1 cut(s) | 415 |
| BstX2I | RGATCY | 2 cut(s) | 329, 781 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1891 |
| BstYI | RGATCY | 2 cut(s) | 329, 781 |
| BstZ17I | GTATAC | 1 cut(s) | 2155 |
| BtgI | CCRYGG | 2 cut(s) | 305, 882 |
| BtsCI | GGATG | 7 cut(s) | 19, 994, 1156, 1393, 1682, 1825, 2035 |
| BtsI | GCAGTG | 1 cut(s) | 404 |
| BtsIMutI | CAGTG | 4 cut(s) | 404, 1552, 1665, 2071 |
| BtuMI | TCGCGA | 1 cut(s) | 1518 |
| Cac8I | GCNNGC | 8 cut(s) | 7, 617, 992, 1282, 1298, 1317, 1520, 1750 |
| CaiI | CAGNNNCTG | 5 cut(s) | 521, 776, 1184, 1924, 2123 |
| CciI | TCATGA | 2 cut(s) | 1033, 1732 |
| CfoI | GCGC | 1 cut(s) | 1584 |
| Cfr10I | RCCGGY | 1 cut(s) | 203 |
| Cfr42I | CCGCGG | 1 cut(s) | 308 |
| CseI | GACGC | 2 cut(s) | 1367, 2045 |
| Csp6I | GTAC | 6 cut(s) | 201, 241, 813, 903, 967, 1656 |
| CspAI | ACCGGT | 1 cut(s) | 203 |
| CviQI | GTAC | 6 cut(s) | 201, 241, 813, 903, 967, 1656 |
| DdeI | CTNAG | 5 cut(s) | 141, 392, 652, 1320, 1906 |
| DraIII | CACNNNGTG | 1 cut(s) | 2014 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 419 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1696 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 419 |
| EaeI | YGGCCR | 3 cut(s) | 1294, 1835, 2002 |
| Eam1104I | CTCTTC | 2 cut(s) | 82, 667 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1696 |
| EarI | CTCTTC | 2 cut(s) | 82, 667 |
| EciI | GGCGGA | 1 cut(s) | 1182 |
| Ecl136II | GAGCTC | 1 cut(s) | 1232 |
| Eco130I | CCWWGG | 4 cut(s) | 62, 882, 1622, 2182 |
| Eco24I | GRGCYC | 3 cut(s) | 1072, 1234, 1286 |
| Eco31I | GGTCTC | 3 cut(s) | 159, 369, 395 |
| Eco32I | GATATC | 1 cut(s) | 1574 |
| Eco47I | GGWCC | 4 cut(s) | 605, 1169, 1928, 2186 |
| Eco53kI | GAGCTC | 1 cut(s) | 1232 |
| Eco57I | CTGAAG | 1 cut(s) | 933 |
| Eco72I | CACGTG | 1 cut(s) | 257 |
| Eco88I | CYCGRG | 1 cut(s) | 156 |
| EcoICRI | GAGCTC | 1 cut(s) | 1232 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1068, 1283, 1928 |
| EcoRI | GAATTC | 1 cut(s) | 499 |
| EcoRII | CCWGG | 7 cut(s) | 385, 494, 1935, 1963, 1968, 1999, 2122 |
| EcoRV | GATATC | 1 cut(s) | 1574 |
| EcoT14I | CCWWGG | 4 cut(s) | 62, 882, 1622, 2182 |
| EcoT38I | GRGCYC | 3 cut(s) | 1072, 1234, 1286 |
| ErhI | CCWWGG | 4 cut(s) | 62, 882, 1622, 2182 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 608, 640 |
| FaqI | GGGAC | 3 cut(s) | 50, 80, 276 |
| FauI | CCCGC | 2 cut(s) | 1273, 1750 |
| FauNDI | CATATG | 1 cut(s) | 1714 |
| FblI | GTMKAC | 2 cut(s) | 1356, 2154 |
| Fnu4HI | GCNGC | 8 cut(s) | 282, 522, 888, 891, 1746, 1815, 1919, 1922 |
| FokI | GGATG | 7 cut(s) | 26, 981, 1163, 1400, 1669, 1812, 2022 |
| FriOI | GRGCYC | 3 cut(s) | 1072, 1234, 1286 |
| Fsp4HI | GCNGC | 8 cut(s) | 282, 522, 888, 891, 1746, 1815, 1919, 1922 |
| FspBI | CTAG | 4 cut(s) | 126, 410, 1524, 1806 |
| GlaI | GCGC | 1 cut(s) | 1583 |
| GluI | GCNGC | 8 cut(s) | 282, 522, 888, 891, 1746, 1815, 1919, 1922 |
| GsaI | CCCAGC | 3 cut(s) | 633, 1928, 1992 |
| GsuI | CTGGAG | 1 cut(s) | 704 |
| HapII | CCGG | 1 cut(s) | 204 |
| HgaI | GACGC | 2 cut(s) | 1367, 2045 |
| HhaI | GCGC | 1 cut(s) | 1584 |
| Hin6I | GCGC | 1 cut(s) | 1582 |
| HinP1I | GCGC | 1 cut(s) | 1582 |
| HinfI | GANTC | 9 cut(s) | 52, 119, 413, 584, 878, 1340, 1448, 1454, 1612 |
| HpaII | CCGG | 1 cut(s) | 204 |
| HphI | GGTGA | 8 cut(s) | 218, 593, 887, 1202, 1273, 1358, 1448, 1699 |
| Hpy166II | GTNNAC | 8 cut(s) | 649, 905, 990, 1211, 1331, 1357, 1855, 2155 |
| Hpy188III | TCNNGA | 7 cut(s) | 156, 158, 1034, 1235, 1517, 1537, 1733 |
| Hpy8I | GTNNAC | 8 cut(s) | 649, 905, 990, 1211, 1331, 1357, 1855, 2155 |
| HpyAV | CCTTC | 8 cut(s) | 155, 459, 848, 1433, 1458, 1712, 1788, 1908 |
| HpyCH4III | ACNGT | 4 cut(s) | 772, 802, 1660, 1859 |
| HpyCH4IV | ACGT | 2 cut(s) | 21, 256 |
| HpyCH4V | TGCA | 8 cut(s) | 779, 990, 1211, 1315, 1331, 1484, 1641, 1817 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 287, 530, 1217, 1508, 1758, 1782, 1979 |
| HpyF3I | CTNAG | 5 cut(s) | 141, 392, 652, 1320, 1906 |
| HpySE526I | ACGT | 2 cut(s) | 21, 256 |
| HspAI | GCGC | 1 cut(s) | 1582 |
| KpnI | GGTACC | 1 cut(s) | 204 |
| KspI | CCGCGG | 1 cut(s) | 308 |
| LmnI | GCTCC | 6 cut(s) | 307, 723, 761, 1229, 1237, 1499 |
| Lsp1109I | GCAGC | 8 cut(s) | 293, 508, 874, 877, 1732, 1801, 1930, 1933 |
| LweI | GCATC | 5 cut(s) | 1003, 1283, 1370, 1691, 1811 |
| MaeI | CTAG | 4 cut(s) | 126, 410, 1524, 1806 |
| MaeII | ACGT | 2 cut(s) | 21, 256 |
| MaeIII | GTNAC | 6 cut(s) | 186, 488, 1261, 1628, 1859, 2082 |
| MboII | GAAGA | 8 cut(s) | 64, 69, 324, 415, 654, 863, 926, 1403 |
| MflI | RGATCY | 2 cut(s) | 329, 781 |
| MhlI | GDGCHC | 6 cut(s) | 992, 1072, 1213, 1234, 1286, 1333 |
| MlsI | TGGCCA | 1 cut(s) | 2004 |
| MluNI | TGGCCA | 1 cut(s) | 2004 |
| MlyI | GAGTC | 4 cut(s) | 61, 407, 1457, 1463 |
| MmeI | TCCRAC | 3 cut(s) | 422, 479, 632 |
| Mox20I | TGGCCA | 1 cut(s) | 2004 |
| MscI | TGGCCA | 1 cut(s) | 2004 |
| MseI | TTAA | 3 cut(s) | 297, 348, 1011 |
| MslI | CAYNNNNRTG | 7 cut(s) | 509, 638, 1139, 1310, 1413, 1731, 1889 |
| Msp20I | TGGCCA | 1 cut(s) | 2004 |
| MspA1I | CMGCKG | 4 cut(s) | 307, 1280, 1745, 1924 |
| MspI | CCGG | 1 cut(s) | 204 |
| MspR9I | CCNGG | 7 cut(s) | 387, 496, 1937, 1965, 1970, 2001, 2124 |
| Mva1269I | GAATGC | 1 cut(s) | 706 |
| MvaI | CCWGG | 7 cut(s) | 387, 496, 1937, 1965, 1970, 2001, 2124 |
| MvnI | CGCG | 2 cut(s) | 307, 1518 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 287, 530, 1217, 1508, 1758, 1782, 1979 |
| NcoI | CCATGG | 1 cut(s) | 882 |
| NdeI | CATATG | 1 cut(s) | 1714 |
| NlaIV | GGNNCC | 8 cut(s) | 45, 202, 678, 1069, 1070, 1111, 1284, 1929 |
| NmuCI | GTSAC | 3 cut(s) | 186, 488, 1261 |
| NruI | TCGCGA | 1 cut(s) | 1518 |
| NspI | RCATGY | 3 cut(s) | 1144, 1673, 1792 |
| PaeR7I | CTCGAG | 1 cut(s) | 156 |
| PagI | TCATGA | 2 cut(s) | 1033, 1732 |
| PasI | CCCWGGG | 1 cut(s) | 1936 |
| PciI | ACATGT | 1 cut(s) | 1788 |
| PctI | GAATGC | 1 cut(s) | 706 |
| PfeI | GAWTC | 5 cut(s) | 119, 584, 878, 1340, 1612 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 461 |
| PinAI | ACCGGT | 1 cut(s) | 203 |
| PkrI | GCNGC | 8 cut(s) | 283, 523, 889, 892, 1747, 1816, 1920, 1923 |
| Ple19I | CGATCG | 1 cut(s) | 1148 |
| PleI | GAGTC | 4 cut(s) | 60, 407, 1456, 1462 |
| PmaCI | CACGTG | 1 cut(s) | 257 |
| PmlI | CACGTG | 1 cut(s) | 257 |
| PpsI | GAGTC | 4 cut(s) | 60, 407, 1456, 1462 |
| Ppu21I | YACGTR | 1 cut(s) | 257 |
| PpuMI | RGGWCCY | 1 cut(s) | 1928 |
| PscI | ACATGT | 1 cut(s) | 1788 |
| Psp124BI | GAGCTC | 1 cut(s) | 1234 |
| Psp1406I | AACGTT | 1 cut(s) | 21 |
| Psp5II | RGGWCCY | 1 cut(s) | 1928 |
| Psp6I | CCWGG | 7 cut(s) | 385, 494, 1935, 1963, 1968, 1999, 2122 |
| PspCI | CACGTG | 1 cut(s) | 257 |
| PspFI | CCCAGC | 3 cut(s) | 629, 1924, 1988 |
| PspGI | CCWGG | 7 cut(s) | 385, 494, 1935, 1963, 1968, 1999, 2122 |
| PspN4I | GGNNCC | 8 cut(s) | 45, 202, 678, 1069, 1070, 1111, 1284, 1929 |
| PspOMI | GGGCCC | 2 cut(s) | 1068, 1282 |
| PspPPI | RGGWCCY | 1 cut(s) | 1928 |
| PstI | CTGCAG | 1 cut(s) | 781 |
| PstNI | CAGNNNCTG | 5 cut(s) | 521, 776, 1184, 1924, 2123 |
| PsuI | RGATCY | 2 cut(s) | 329, 781 |
| PvuI | CGATCG | 1 cut(s) | 1148 |
| PvuII | CAGCTG | 1 cut(s) | 1924 |
| RruI | TCGCGA | 1 cut(s) | 1518 |
| RsaI | GTAC | 6 cut(s) | 202, 242, 814, 904, 968, 1657 |
| RsaNI | GTAC | 6 cut(s) | 201, 241, 813, 903, 967, 1656 |
| RseI | CAYNNNNRTG | 7 cut(s) | 509, 638, 1139, 1310, 1413, 1731, 1889 |
| SacI | GAGCTC | 1 cut(s) | 1234 |
| SacII | CCGCGG | 1 cut(s) | 308 |
| SaqAI | TTAA | 3 cut(s) | 297, 348, 1011 |
| SatI | GCNGC | 8 cut(s) | 282, 522, 888, 891, 1746, 1815, 1919, 1922 |
| ScaI | AGTACT | 1 cut(s) | 814 |
| SchI | GAGTC | 4 cut(s) | 61, 407, 1457, 1463 |
| ScrFI | CCNGG | 7 cut(s) | 387, 496, 1937, 1965, 1970, 2001, 2124 |
| SduI | GDGCHC | 6 cut(s) | 992, 1072, 1213, 1234, 1286, 1333 |
| SfaNI | GCATC | 5 cut(s) | 1003, 1283, 1370, 1691, 1811 |
| SfcI | CTRYAG | 1 cut(s) | 777 |
| Sfr274I | CTCGAG | 1 cut(s) | 156 |
| Sfr303I | CCGCGG | 1 cut(s) | 308 |
| SgrBI | CCGCGG | 1 cut(s) | 308 |
| SinI | GGWCC | 4 cut(s) | 605, 1169, 1928, 2186 |
| SlaI | CTCGAG | 1 cut(s) | 156 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 509, 638, 1139, 1310, 1413, 1731, 1889 |
| SmlI | CTYRAG | 4 cut(s) | 103, 156, 1256, 1694 |
| SmoI | CTYRAG | 4 cut(s) | 103, 156, 1256, 1694 |
| SsiI | CCGC | 5 cut(s) | 305, 307, 1167, 1280, 1743 |
| SspMI | CTAG | 4 cut(s) | 126, 410, 1524, 1806 |
| SstI | GAGCTC | 1 cut(s) | 1234 |
| StyD4I | CCNGG | 7 cut(s) | 385, 494, 1935, 1963, 1968, 1999, 2122 |
| StyI | CCWWGG | 4 cut(s) | 62, 882, 1622, 2182 |
| TaaI | ACNGT | 4 cut(s) | 772, 802, 1660, 1859 |
| TaiI | ACGT | 2 cut(s) | 24, 259 |
| TaqI | TCGA | 3 cut(s) | 157, 1399, 1457 |
| TaqII | GACCGA | 1 cut(s) | 351 |
| TatI | WGTACW | 2 cut(s) | 812, 1655 |
| TfiI | GAWTC | 5 cut(s) | 119, 584, 878, 1340, 1612 |
| Tru1I | TTAA | 3 cut(s) | 297, 348, 1011 |
| Tru9I | TTAA | 3 cut(s) | 297, 348, 1011 |
| TscAI | CASTG | 4 cut(s) | 411, 1552, 1665, 2071 |
| TseFI | GTSAC | 3 cut(s) | 186, 488, 1261 |
| TseI | GCWGC | 8 cut(s) | 281, 521, 887, 890, 1745, 1814, 1918, 1921 |
| Tsp45I | GTSAC | 3 cut(s) | 186, 488, 1261 |
| TspGWI | ACGGA | 1 cut(s) | 189 |
| TspRI | CASTG | 4 cut(s) | 411, 1552, 1665, 2071 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 461 |
| VneI | GTGCAC | 3 cut(s) | 988, 1209, 1329 |
| VpaK11BI | GGWCC | 4 cut(s) | 605, 1169, 1928, 2186 |
| XapI | RAATTY | 3 cut(s) | 433, 467, 499 |
| XceI | RCATGY | 3 cut(s) | 1144, 1673, 1792 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1769 |
| XhoI | CTCGAG | 1 cut(s) | 156 |
| XmiI | GTMKAC | 2 cut(s) | 1356, 2154 |
| XspI | CTAG | 4 cut(s) | 126, 410, 1524, 1806 |
| ZrmI | AGTACT | 1 cut(s) | 814 |