Rorug05G0118900
NAC Family

Plant protein of unknown function (DUF641)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000076
Physical Location & Seq
Reverse (-)
10494261 .. 10500432
6172 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0118900.1

Sequence Viewer

Length: 1959 bp
ATGGGTGGTGTTGCATCAAGGATTAACAAGGAAGAAAAGGTTCGGGTTTGCAAGGAGAGAAGGAAGCTAATGAAGCAGTTGGTGAGGTTTAGAGGTGAATTTGCAGATGCCCAGTTGGTTTATTTGAGAGCATTAAGGAATACTGGAGCAACACTAAGACAATTTACAGAGTCTGAGTCATTGGAGCTTGAAACTACTACTTATGGCTTAGGATTGCCACCATCACCGCCACCCCCTTTGCCCCCTTCCCCTCCACCACCACCTCCTCTCAGCCCTGACTTGAGAAAGTTGGATAATGATCGGAAAGAAGAAGCTGGCCTAGATATGGAGGATGATGTCAATACCCCACCACCTCCTCTGGTCCCAGACTCATCATCTTGGGACATTTTTGGTTCATCTTCACCGCATTATCAGAGACATGATGAAACAGTGGAGCCACATGACGAGGAAAAGTGGGCAGAGACTAATTCAGAATTTGTGGAAGACGAACAGGAAGAGGAAACTGTTGCAAATGTTGTGAGTATGCTGCCTAAGAAACTGCAGCTCGAAGAATCGGTTGAGGATAATTCATCAACAATGAGGTGGCCATATCCTAAGGACTCTGCAGATACAACCATGGTACTATGGAAAAGCAAGAGGACCTTGGAGAGTATAGCTAAGGAGTTGGATGATTATTTTCTGAAATCTTCAGCTGGTTTAAAGGAAATTGCTATTCTTATGGAAATCAAAGGCAGGGATACAGTTCTGCTACAGAGTACTAATGAAAACAAAAGGAAGAGGTGCAATTCTGCAAAGGTCTTTAGTGCATTGTCATGGAGCCGATCTGCTAGGGCACTTCAATATTCAAGAGATGCTGTTGAGTCTAGTGGTCCTAGTGAACCTTGCAAGCCAGGAGCTCATTGCATCACTCTCAGGAAGTTATATGAAGCGGAAAAGAAACTTTACAAGGAGATTAAGGAGGAAGAGCTTACCAAACTAGAATACGAGAGGAAATCCAAATTACTGCAAAAACAAGAGGATGAAAACCAGGATTGCAGCAAGAGTGAGAAAACTCGGTTTAGTGTTGAGAGTTTGGAGGCTGACATCTTACGTCTTCAGCAGTCCATCAGCAGTACTTGTTTTTCTATAGTGAAGCTCATAGATGACGAGCTGTATCCTCAGTTGTGCACATTAATTTCCGGACTTTTGCACATATGGAGAACGATGCATGAATGTCACCAAGTTCAGAATTATGTTTCTCAGCAGTTGAATAATCTTACTGATATTCATAAGATTGACTTGAGCACCACCTATCATCGCCAAGCAGCAATTCAACTAGAGTCTGAGGTATCTTGTTGGAACAACAGCTTTTCTGAAGCCATAAAATCGCAACAAGAATATGTCAGAACACTTTGCAGGTGGATCCAACTCATTGATAATCCTGTGGATGATCATCCACAGAGTTTGTACTCTTCTGCTGTTCGTTGCTTGTGTGACCAATGGCAGCTTGCCCTTGATAGATCACCAAGTAAGGAAGCAGCAGAGGCCATCAAGAGCCTTCTATCAGCCATCCACAGAATTTGTCTGCAGCAAGAAGAGGAGCACAATCTGCAGAAGAAATCCGAAAAACTCGAGAAGAGGCTGCAAAAGGAGTTGTATTCATTAGCTGACTTGGAGAAAAAGATGGAGCTCAGCTTCACTGATGGAGATGCGTGCTCGGACCTAGGCCCTAAGCATCCTTTCACAATAAAGAGGGATAAAACTGAAGCCTTGAAGAAGCAAGTGGAAATTGAGAAAGCCAGATATCACAACGCAGTCCAGGTCAGCAAGAACCTGATATTGGACAATCTGAAAACAAGCCTTCCCAAGGTGTTCCAAACGTTGATGGCATTTTCTGGTGCTTATGTTCAGGGCATTGAGGCTATATCTAGTGACACCAAGCCAGCAGAGAGTTCTGATGGTGAAGTTCAAACCTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF641

Protein Analysis

652

Amino Acids

74.35

Weight (kDa)

5.47

Isoelectric Point (pI)

62.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF630 PF04783 1 - 59 1e-20 Protein of unknown function (DUF630)
DUF632 PF04782 215 - 518 4.5e-86 Protein of unknown function (DUF632)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1386
Acc36I ACCTGC 1 cut(s) 1386
AccIII TCCGGA 1 cut(s) 1178
AciI CCGC 3 cut(s) 227, 404, 929
AclI AACGTT 1 cut(s) 1859
AclWI GGATC 2 cut(s) 1396, 1409
AcoI YGGCCR 1 cut(s) 584
AcsI RAATTY 3 cut(s) 98, 473, 1557
AcuI CTGAAG 4 cut(s) 672, 1079, 1374, 1764
AfaI GTAC 4 cut(s) 621, 757, 1114, 1448
AfiI CCNNNNNNNGG 3 cut(s) 325, 1819, 1846
AgsI TTSAA 7 cut(s) 191, 839, 846, 1249, 1313, 1753, 1949
AjnI CCWGG 3 cut(s) 889, 1026, 1797
AjuI GAANNNNNNNTTGG 4 cut(s) 1293, 1325, 1802, 1834
Alw21I GWGCWC 6 cut(s) 898, 1169, 1286, 1584, 1671, 1697
Alw26I GTCTC 2 cut(s) 409, 455
Alw44I GTGCAC 1 cut(s) 1165
AlwI GGATC 2 cut(s) 1396, 1409
AlwNI CAGNNNCTG 1 cut(s) 173
Ama87I CYCGRG 1 cut(s) 1610
Aor13HI TCCGGA 1 cut(s) 1178
AoxI GGCC 4 cut(s) 316, 584, 1524, 1705
ApaLI GTGCAC 1 cut(s) 1165
ApeKI GCWGC 8 cut(s) 526, 541, 1035, 1304, 1483, 1517, 1567, 1621
ApoI RAATTY 3 cut(s) 98, 473, 1557
AseI ATTAAT 1 cut(s) 1172
Asp700I GAANNNNTTC 1 cut(s) 39
AspA2I CCTAGG 1 cut(s) 1702
AspS9I GGNCC 5 cut(s) 361, 639, 869, 1699, 1706
AsuHPI GGTGA 7 cut(s) 94, 107, 216, 393, 1208, 1494, 1952
AvaI CYCGRG 1 cut(s) 1610
AvaII GGWCC 4 cut(s) 361, 639, 869, 1699
AvrII CCTAGG 1 cut(s) 1702
AxyI CCTNAGG 1 cut(s) 594
BaeGI GKGCMC 2 cut(s) 835, 1169
BalI TGGCCA 1 cut(s) 586
BamHI GGATCC 1 cut(s) 1401
BanII GRGCYC 2 cut(s) 898, 1671
BbsI GAAGAC 2 cut(s) 489, 1085
Bbv12I GWGCWC 6 cut(s) 898, 1169, 1286, 1584, 1671, 1697
BbvI GCAGC 8 cut(s) 513, 553, 1047, 1316, 1495, 1529, 1579, 1608
BccI CCATC 8 cut(s) 229, 1112, 1535, 1556, 1657, 1676, 1858, 1931
BciT130I CCWGG 3 cut(s) 891, 1028, 1799
BciVI GTATCC 2 cut(s) 730, 1164
BclI TGATCA 1 cut(s) 1429
BcoDI GTCTC 2 cut(s) 409, 455
BfaI CTAG 8 cut(s) 320, 828, 864, 873, 977, 1316, 1703, 1908
BfmI CTRYAG 6 cut(s) 539, 603, 749, 1125, 1565, 1589
BfuAI ACCTGC 1 cut(s) 1386
BfuI GTATCC 2 cut(s) 730, 1164
BisI GCNGC 8 cut(s) 527, 542, 1036, 1305, 1484, 1518, 1568, 1622
BlnI CCTAGG 1 cut(s) 1702
BlpI GCTNAGC 1 cut(s) 1670
BlsI GCNGC 8 cut(s) 528, 543, 1037, 1306, 1485, 1519, 1569, 1623
BmcAI AGTACT 2 cut(s) 757, 1114
Bme1390I CCNGG 3 cut(s) 891, 1028, 1799
Bme18I GGWCC 4 cut(s) 361, 639, 869, 1699
BmeT110I CYCGRG 1 cut(s) 1610
BmgT120I GGNCC 5 cut(s) 361, 639, 869, 1699, 1706
BmiI GGNNCC 4 cut(s) 363, 435, 818, 1403
BmrFI CCNGG 3 cut(s) 891, 1028, 1799
BmrI ACTGGG 1 cut(s) 106
BmsI GCATC 7 cut(s) 23, 97, 841, 912, 1194, 1678, 1723
BmuI ACTGGG 1 cut(s) 106
BpiI GAAGAC 2 cut(s) 489, 1085
BpmI CTGGAG 1 cut(s) 165
Bpu10I CCTNAGC 3 cut(s) 208, 657, 1710
Bpu1102I GCTNAGC 1 cut(s) 1670
BpuEI CTTGAG 2 cut(s) 301, 1300
BsaBI GATNNNNATC 2 cut(s) 297, 1431
BsaJI CCNNGG 4 cut(s) 615, 642, 1702, 1845
BsaWI WCCGGW 1 cut(s) 1178
Bsc4I CCNNNNNNNGG 3 cut(s) 325, 1819, 1846
Bse1I ACTGG 2 cut(s) 112, 148
Bse21I CCTNAGG 1 cut(s) 594
Bse3DI GCAATG 1 cut(s) 898
Bse8I GATNNNNATC 2 cut(s) 297, 1431
BseAI TCCGGA 1 cut(s) 1178
BseBI CCWGG 3 cut(s) 891, 1028, 1799
BseDI CCNNGG 4 cut(s) 615, 642, 1702, 1845
BseGI GGATG 7 cut(s) 337, 673, 1024, 1432, 1432, 1548, 1714
BseJI GATNNNNATC 2 cut(s) 297, 1431
BseLI CCNNNNNNNGG 3 cut(s) 325, 1819, 1846
BseMI GCAATG 1 cut(s) 898
BseMII CTCAG 7 cut(s) 165, 283, 925, 1172, 1253, 1314, 1684
BseNI ACTGG 2 cut(s) 112, 148
BseRI GAGGAG 3 cut(s) 255, 345, 1592
BseSI GKGCMC 2 cut(s) 835, 1169
BseXI GCAGC 8 cut(s) 513, 553, 1047, 1316, 1495, 1529, 1579, 1608
BshFI GGCC 4 cut(s) 318, 586, 1526, 1707
BsiHKAI GWGCWC 6 cut(s) 898, 1169, 1286, 1584, 1671, 1697
BsiHKCI CYCGRG 1 cut(s) 1610
BsiSI CCGG 1 cut(s) 1179
BslFI GGGAC 2 cut(s) 347, 395
BslI CCNNNNNNNGG 3 cut(s) 325, 1819, 1846
BsmAI GTCTC 2 cut(s) 409, 455
BsmFI GGGAC 2 cut(s) 347, 395
BsnI GGCC 4 cut(s) 318, 586, 1526, 1707
BsoBI CYCGRG 1 cut(s) 1610
Bsp1286I GDGCHC 7 cut(s) 835, 898, 1169, 1286, 1584, 1671, 1697
Bsp13I TCCGGA 1 cut(s) 1178
Bsp143I GATC 5 cut(s) 298, 821, 1401, 1429, 1499
Bsp1720I GCTNAGC 1 cut(s) 1670
Bsp19I CCATGG 1 cut(s) 615
BspACI CCGC 3 cut(s) 227, 404, 929
BspANI GGCC 4 cut(s) 318, 586, 1526, 1707
BspCNI CTCAG 7 cut(s) 166, 282, 924, 1171, 1252, 1315, 1683
BspEI TCCGGA 1 cut(s) 1178
BspLI GGNNCC 4 cut(s) 363, 435, 818, 1403
BspMAI CTGCAG 4 cut(s) 543, 607, 1569, 1593
BspMI ACCTGC 1 cut(s) 1386
BspPI GGATC 2 cut(s) 1396, 1409
BspQI GCTCTTC 1 cut(s) 957
BsrDI GCAATG 1 cut(s) 898
BsrI ACTGG 2 cut(s) 112, 148
BssECI CCNNGG 4 cut(s) 615, 642, 1702, 1845
BssMI GATC 5 cut(s) 298, 821, 1401, 1429, 1499
BssT1I CCWWGG 4 cut(s) 615, 642, 1702, 1845
Bst2UI CCWGG 3 cut(s) 891, 1028, 1799
Bst4CI ACNGT 3 cut(s) 430, 505, 742
Bst6I CTCTTC 6 cut(s) 489, 770, 957, 1456, 1569, 1610
BstAPI GCANNNNNTGC 1 cut(s) 1588
BstC8I GCNNGC 5 cut(s) 316, 887, 1488, 1693, 1923
BstDSI CCRYGG 1 cut(s) 615
BstENI CCTNNNNNAGG 1 cut(s) 1844
BstF5I GGATG 7 cut(s) 337, 673, 1024, 1432, 1432, 1548, 1714
BstKTI GATC 5 cut(s) 301, 824, 1404, 1432, 1502
BstMAI GTCTC 2 cut(s) 409, 455
BstMBI GATC 5 cut(s) 298, 821, 1401, 1429, 1499
BstMWI GCNNNNNNNGC 3 cut(s) 73, 1523, 1588
BstNI CCWGG 3 cut(s) 891, 1028, 1799
BstSCI CCNGG 3 cut(s) 889, 1026, 1797
BstSFI CTRYAG 6 cut(s) 539, 603, 749, 1125, 1565, 1589
BstSLI GKGCMC 2 cut(s) 835, 1169
BstV1I GCAGC 8 cut(s) 513, 553, 1047, 1316, 1495, 1529, 1579, 1608
BstV2I GAAGAC 2 cut(s) 489, 1085
BstX2I RGATCY 1 cut(s) 1401
BstYI RGATCY 1 cut(s) 1401
Bsu36I CCTNAGG 1 cut(s) 594
BsuI GTATCC 2 cut(s) 730, 1164
BsuRI GGCC 4 cut(s) 318, 586, 1526, 1707
BtgI CCRYGG 1 cut(s) 615
BtgZI GCGATG 1 cut(s) 1280
BtsCI GGATG 7 cut(s) 337, 673, 1024, 1432, 1432, 1548, 1714
BtsIMutI CAGTG 2 cut(s) 435, 1677
BveI ACCTGC 1 cut(s) 1386
Cac8I GCNNGC 5 cut(s) 316, 887, 1488, 1693, 1923
CaiI CAGNNNCTG 1 cut(s) 173
Cfr13I GGNCC 5 cut(s) 361, 639, 869, 1699, 1706
Csp6I GTAC 4 cut(s) 620, 756, 1113, 1447
CspCI CAANNNNNGTGG 6 cut(s) 219, 254, 1425, 1460, 1541, 1576
CviAII CATG 5 cut(s) 419, 440, 616, 813, 1208
CviQI GTAC 4 cut(s) 620, 756, 1113, 1447
DpnI GATC 5 cut(s) 300, 823, 1403, 1431, 1501
DpnII GATC 5 cut(s) 298, 821, 1401, 1429, 1499
DraI TTTAAA 1 cut(s) 699
EaeI YGGCCR 1 cut(s) 584
Eam1104I CTCTTC 6 cut(s) 489, 770, 957, 1456, 1569, 1610
EarI CTCTTC 6 cut(s) 489, 770, 957, 1456, 1569, 1610
Ecl136II GAGCTC 2 cut(s) 896, 1669
Eco130I CCWWGG 4 cut(s) 615, 642, 1702, 1845
Eco24I GRGCYC 2 cut(s) 898, 1671
Eco32I GATATC 1 cut(s) 1784
Eco47I GGWCC 4 cut(s) 361, 639, 869, 1699
Eco53kI GAGCTC 2 cut(s) 896, 1669
Eco57I CTGAAG 4 cut(s) 672, 1079, 1374, 1764
Eco81I CCTNAGG 1 cut(s) 594
Eco88I CYCGRG 1 cut(s) 1610
EcoICRI GAGCTC 2 cut(s) 896, 1669
EcoNI CCTNNNNNAGG 1 cut(s) 1844
EcoO109I RGGNCCY 2 cut(s) 639, 1706
EcoRII CCWGG 3 cut(s) 889, 1026, 1797
EcoRV GATATC 1 cut(s) 1784
EcoT14I CCWWGG 4 cut(s) 615, 642, 1702, 1845
EcoT22I ATGCAT 1 cut(s) 1209
EcoT38I GRGCYC 2 cut(s) 898, 1671
ErhI CCWWGG 4 cut(s) 615, 642, 1702, 1845
FaeI CATG 5 cut(s) 422, 443, 619, 816, 1211
FalI AAGNNNNNCTT 4 cut(s) 626, 658, 1262, 1294
FaqI GGGAC 2 cut(s) 347, 395
FatI CATG 5 cut(s) 418, 439, 615, 812, 1207
FauNDI CATATG 1 cut(s) 1193
FbaI TGATCA 1 cut(s) 1429
Fnu4HI GCNGC 8 cut(s) 527, 542, 1036, 1305, 1484, 1518, 1568, 1622
FokI GGATG 7 cut(s) 344, 680, 1031, 1419, 1439, 1535, 1701
FriOI GRGCYC 2 cut(s) 898, 1671
Fsp4HI GCNGC 8 cut(s) 527, 542, 1036, 1305, 1484, 1518, 1568, 1622
FspBI CTAG 8 cut(s) 320, 828, 864, 873, 977, 1316, 1703, 1908
GluI GCNGC 8 cut(s) 527, 542, 1036, 1305, 1484, 1518, 1568, 1622
GsuI CTGGAG 1 cut(s) 165
HaeIII GGCC 4 cut(s) 318, 586, 1526, 1707
HapII CCGG 1 cut(s) 1179
Hin1II CATG 5 cut(s) 422, 443, 619, 816, 1211
HinfI GANTC 7 cut(s) 170, 176, 368, 551, 599, 860, 1319
HpaII CCGG 1 cut(s) 1179
HphI GGTGA 7 cut(s) 94, 107, 216, 393, 1208, 1494, 1952
Hpy166II GTNNAC 2 cut(s) 878, 1167
Hpy188III TCNNGA 5 cut(s) 846, 913, 1179, 1531, 1612
Hpy8I GTNNAC 2 cut(s) 878, 1167
HpyAV CCTTC 4 cut(s) 54, 255, 1547, 1850
HpyCH4III ACNGT 3 cut(s) 430, 505, 742
HpyCH4IV ACGT 2 cut(s) 1090, 1859
HpyF10VI GCNNNNNNNGC 3 cut(s) 73, 1523, 1588
HpySE526I ACGT 2 cut(s) 1090, 1859
Hsp92II CATG 5 cut(s) 422, 443, 619, 816, 1211
Kpn2I TCCGGA 1 cut(s) 1178
Ksp22I TGATCA 1 cut(s) 1429
Kzo9I GATC 5 cut(s) 298, 821, 1401, 1429, 1499
LguI GCTCTTC 1 cut(s) 957
LmnI GCTCC 7 cut(s) 146, 184, 433, 816, 893, 1579, 1666
Lsp1109I GCAGC 8 cut(s) 513, 553, 1047, 1316, 1495, 1529, 1579, 1608
LweI GCATC 7 cut(s) 23, 97, 841, 912, 1194, 1678, 1723
MaeI CTAG 8 cut(s) 320, 828, 864, 873, 977, 1316, 1703, 1908
MaeII ACGT 2 cut(s) 1090, 1859
MaeIII GTNAC 3 cut(s) 1214, 1472, 1910
MalI GATC 5 cut(s) 300, 823, 1403, 1431, 1501
MboI GATC 5 cut(s) 298, 821, 1401, 1429, 1499
MflI RGATCY 1 cut(s) 1401
MhlI GDGCHC 7 cut(s) 835, 898, 1169, 1286, 1584, 1671, 1697
MlsI TGGCCA 1 cut(s) 586
MluNI TGGCCA 1 cut(s) 586
MlyI GAGTC 6 cut(s) 179, 185, 362, 593, 869, 1328
MmeI TCCRAC 4 cut(s) 270, 645, 1316, 1429
Mox20I TGGCCA 1 cut(s) 586
Mph1103I ATGCAT 1 cut(s) 1209
MroI TCCGGA 1 cut(s) 1178
MroXI GAANNNNTTC 1 cut(s) 39
MscI TGGCCA 1 cut(s) 586
MseI TTAA 5 cut(s) 24, 134, 698, 954, 1172
MslI CAYNNNNRTG 1 cut(s) 811
Msp20I TGGCCA 1 cut(s) 586
MspA1I CMGCKG 1 cut(s) 692
MspI CCGG 1 cut(s) 1179
MspR9I CCNGG 3 cut(s) 891, 1028, 1799
MvaI CCWGG 3 cut(s) 891, 1028, 1799
MwoI GCNNNNNNNGC 3 cut(s) 73, 1523, 1588
NcoI CCATGG 1 cut(s) 615
NdeI CATATG 1 cut(s) 1193
NdeII GATC 5 cut(s) 298, 821, 1401, 1429, 1499
NlaIII CATG 5 cut(s) 422, 443, 619, 816, 1211
NlaIV GGNNCC 4 cut(s) 363, 435, 818, 1403
NmuCI GTSAC 3 cut(s) 1214, 1472, 1910
NsiI ATGCAT 1 cut(s) 1209
PaeR7I CTCGAG 1 cut(s) 1610
PaqCI CACCTGC 1 cut(s) 1386
PciSI GCTCTTC 1 cut(s) 957
PdmI GAANNNNTTC 1 cut(s) 39
PfeI GAWTC 1 cut(s) 551
PkrI GCNGC 8 cut(s) 528, 543, 1037, 1306, 1485, 1519, 1569, 1623
PleI GAGTC 6 cut(s) 178, 184, 362, 593, 868, 1327
PpsI GAGTC 6 cut(s) 178, 184, 362, 593, 868, 1327
PpuMI RGGWCCY 1 cut(s) 639
PshBI ATTAAT 1 cut(s) 1172
Psp124BI GAGCTC 2 cut(s) 898, 1671
Psp1406I AACGTT 1 cut(s) 1859
Psp5II RGGWCCY 1 cut(s) 639
Psp6I CCWGG 3 cut(s) 889, 1026, 1797
PspGI CCWGG 3 cut(s) 889, 1026, 1797
PspN4I GGNNCC 4 cut(s) 363, 435, 818, 1403
PspPI GGNCC 5 cut(s) 361, 639, 869, 1699, 1706
PspPPI RGGWCCY 1 cut(s) 639
PstI CTGCAG 4 cut(s) 543, 607, 1569, 1593
PstNI CAGNNNCTG 1 cut(s) 173
PsuI RGATCY 1 cut(s) 1401
PvuII CAGCTG 1 cut(s) 692
RsaI GTAC 4 cut(s) 621, 757, 1114, 1448
RsaNI GTAC 4 cut(s) 620, 756, 1113, 1447
RseI CAYNNNNRTG 1 cut(s) 811
SacI GAGCTC 2 cut(s) 898, 1671
SapI GCTCTTC 1 cut(s) 957
SaqAI TTAA 5 cut(s) 24, 134, 698, 954, 1172
SatI GCNGC 8 cut(s) 527, 542, 1036, 1305, 1484, 1518, 1568, 1622
Sau3AI GATC 5 cut(s) 298, 821, 1401, 1429, 1499
Sau96I GGNCC 5 cut(s) 361, 639, 869, 1699, 1706
ScaI AGTACT 2 cut(s) 757, 1114
SchI GAGTC 6 cut(s) 179, 185, 362, 593, 869, 1328
ScrFI CCNGG 3 cut(s) 891, 1028, 1799
SduI GDGCHC 7 cut(s) 835, 898, 1169, 1286, 1584, 1671, 1697
SfaNI GCATC 7 cut(s) 23, 97, 841, 912, 1194, 1678, 1723
SfcI CTRYAG 6 cut(s) 539, 603, 749, 1125, 1565, 1589
Sfr274I CTCGAG 1 cut(s) 1610
SinI GGWCC 4 cut(s) 361, 639, 869, 1699
SlaI CTCGAG 1 cut(s) 1610
SmiMI CAYNNNNRTG 1 cut(s) 811
SmlI CTYRAG 3 cut(s) 280, 1279, 1610
SmoI CTYRAG 3 cut(s) 280, 1279, 1610
SsiI CCGC 3 cut(s) 227, 404, 929
SspI AATATT 1 cut(s) 842
SspMI CTAG 8 cut(s) 320, 828, 864, 873, 977, 1316, 1703, 1908
SstI GAGCTC 2 cut(s) 898, 1671
StyD4I CCNGG 3 cut(s) 889, 1026, 1797
StyI CCWWGG 4 cut(s) 615, 642, 1702, 1845
TaaI ACNGT 3 cut(s) 430, 505, 742
TaiI ACGT 2 cut(s) 1093, 1862
TaqI TCGA 2 cut(s) 546, 1611
TatI WGTACW 3 cut(s) 755, 1112, 1446
TfiI GAWTC 1 cut(s) 551
Tru1I TTAA 5 cut(s) 24, 134, 698, 954, 1172
Tru9I TTAA 5 cut(s) 24, 134, 698, 954, 1172
TscAI CASTG 2 cut(s) 435, 1684
TseFI GTSAC 3 cut(s) 1214, 1472, 1910
TseI GCWGC 8 cut(s) 526, 541, 1035, 1304, 1483, 1517, 1567, 1621
Tsp45I GTSAC 3 cut(s) 1214, 1472, 1910
TspRI CASTG 2 cut(s) 435, 1684
VneI GTGCAC 1 cut(s) 1165
VpaK11BI GGWCC 4 cut(s) 361, 639, 869, 1699
VspI ATTAAT 1 cut(s) 1172
XagI CCTNNNNNAGG 1 cut(s) 1844
XapI RAATTY 3 cut(s) 98, 473, 1557
XhoI CTCGAG 1 cut(s) 1610
XmaJI CCTAGG 1 cut(s) 1702
XmnI GAANNNNTTC 1 cut(s) 39
XspI CTAG 8 cut(s) 320, 828, 864, 873, 977, 1316, 1703, 1908
ZrmI AGTACT 2 cut(s) 757, 1114
Zsp2I ATGCAT 1 cut(s) 1209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.