FvH4_3g18460
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000076
Physical Location & Seq
Forward (+)
11795258 .. 11796643
1386 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g18460.t1

Sequence Viewer

Length: 1113 bp
ATGGAGGGTGGCTGTGAGCGTCATACGCTTCTGCCAGGTCAAAGGTTTTGCCCCATGGAAGATGAACTACTTATGCATTACCTTAATCCCAAGGTGAATGGAAAGGAGGTACCCGGACAAGAAACCCTAATTAGCGAGTTAGATCTTTACGGTGACGAAGAACCTTGGAATACATGGAAAAGATTCGAAAAAGATAGAGCAAACGACTTGAGAAGGAACAAAGATCTCTACTTCTTCACCAGATTGAAAAAGGTGAGCGCAAAAGGCTCACGTATATGCCGAAAAGTTGGGAAGGGTACATGGAAAGGCCAGGACAAAGCCAAAAAGATATATCTTGTTGATCAGAAACAGCAACAAACAAAAACTCTTCTTGGTTCCAGGAAAACCTACACCTACAAGAATACGGGATCTGAACATCATGGTCGTTGGATCATGTATGAGTATGAACTTGATGAGTCCCAATTCCTGCACAAGAAACAAGTAAACAAGAACGAGTACGTTCTTTGTTTAATTAGGAAGAATGATATACTGCCGGAAAAGAAAAGAAAAAGGCAAGAAGAAGAAGATGATCAGGTGCTTGAAGACTACGCCGAGGACGACGACGATGGAGATAACATGAAACCTGAACCTGTTATTGAGGAGCCGCAAGAGAAACGGCAACGTGATCTACCATGCACTGATAATGTGCCAGCACCATCATTGGATCCGGTGGCTGAAGTAGACCAATGGTTTAACTCAGAATACTACCAACCAGCACCACCATTGGAAGCTTATAACCTAGCTGAACCTCAACCAAGCGAAGGTTATTTGGGAAAGCAATGTCAGATGACAATGTACTCAGATAATAATATAATGACTGGCCATAATAACTTTCACCAAGATAAAAATCAGGTGCAGCAAAGGGGAGCTGAAGAGGGTTTCATGACACCTGGGGAAGTTGGTCTGTATGGCGAAGACTTAAATTATGTTATGGATGATGCAAATTGGCCATCTTATGATATTGAGGAGCTAAAGCAGCTATTACACAATGATCAGCAGCAGCTAAGTGCCATGGATGTGGGTGATCAATCGAATGATAATTCTTATTTAGATTTCAACAACTTAACAATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

371

Amino Acids

43.27

Weight (kDa)

4.86

Isoelectric Point (pI)

54.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 12 - 150 8.8e-25 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 774
Acc65I GGTACC 1 cut(s) 109
AccB1I GGYRCC 1 cut(s) 109
AccI GTMKAC 1 cut(s) 720
AciI CCGC 1 cut(s) 644
AclWI GGATC 4 cut(s) 415, 437, 698, 711
AcoI YGGCCR 2 cut(s) 859, 986
AcuI CTGAAG 2 cut(s) 735, 930
AfaI GTAC 4 cut(s) 111, 298, 497, 836
AfiI CCNNNNNNNGG 1 cut(s) 800
AgsI TTSAA 3 cut(s) 247, 581, 1096
AjnI CCWGG 4 cut(s) 34, 309, 377, 928
AluBI AGCT 6 cut(s) 770, 782, 908, 1009, 1018, 1042
AluI AGCT 6 cut(s) 770, 782, 908, 1009, 1018, 1042
AlwI GGATC 4 cut(s) 415, 437, 698, 711
AoxI GGCC 3 cut(s) 307, 859, 986
ApeKI GCWGC 4 cut(s) 895, 1015, 1036, 1039
Asp700I GAANNNNTTC 1 cut(s) 182
Asp718I GGTACC 1 cut(s) 109
AspLEI GCGC 1 cut(s) 260
AsuC2I CCSGG 1 cut(s) 114
AsuHPI GGTGA 6 cut(s) 106, 164, 229, 265, 866, 1073
AsuII TTCGAA 1 cut(s) 186
BalI TGGCCA 2 cut(s) 861, 988
BamHI GGATCC 1 cut(s) 703
BanI GGYRCC 1 cut(s) 109
BarI GAAGNNNNNNTAC 2 cut(s) 51, 83
BbsI GAAGAC 2 cut(s) 588, 960
BbvI GCAGC 4 cut(s) 907, 1027, 1048, 1051
BccI CCATC 3 cut(s) 599, 703, 997
BceAI ACGGC 1 cut(s) 671
BciT130I CCWGG 4 cut(s) 36, 311, 379, 930
BclI TGATCA 4 cut(s) 340, 568, 1030, 1063
BcnI CCSGG 1 cut(s) 114
BfaI CTAG 2 cut(s) 779, 1111
BglII AGATCT 2 cut(s) 142, 223
BisI GCNGC 5 cut(s) 644, 896, 1016, 1037, 1040
BlsI GCNGC 5 cut(s) 645, 897, 1017, 1038, 1041
Bme1390I CCNGG 5 cut(s) 36, 114, 311, 379, 930
BmiI GGNNCC 4 cut(s) 111, 376, 642, 705
BmrFI CCNGG 5 cut(s) 36, 114, 311, 379, 930
BmsI GCATC 1 cut(s) 967
BpiI GAAGAC 2 cut(s) 588, 960
Bpu14I TTCGAA 1 cut(s) 186
BpuEI CTTGAG 1 cut(s) 229
BpuMI CCSGG 1 cut(s) 114
BsaAI YACGTR 1 cut(s) 272
BsaBI GATNNNNATC 1 cut(s) 885
BsaJI CCNNGG 6 cut(s) 54, 90, 164, 591, 929, 1050
BsaWI WCCGGW 1 cut(s) 706
Bsc4I CCNNNNNNNGG 1 cut(s) 800
Bse1I ACTGG 1 cut(s) 862
Bse3DI GCAATG 1 cut(s) 824
Bse8I GATNNNNATC 1 cut(s) 885
BseBI CCWGG 4 cut(s) 36, 311, 379, 930
BseDI CCNNGG 6 cut(s) 54, 90, 164, 591, 929, 1050
BseGI GGATG 2 cut(s) 979, 1060
BseJI GATNNNNATC 1 cut(s) 885
BseLI CCNNNNNNNGG 1 cut(s) 800
BseMI GCAATG 1 cut(s) 824
BseMII CTCAG 2 cut(s) 750, 852
BseNI ACTGG 1 cut(s) 862
BseRI GAGGAG 2 cut(s) 653, 1019
BseXI GCAGC 4 cut(s) 907, 1027, 1048, 1051
BsgI GTGCAG 2 cut(s) 452, 914
BshFI GGCC 3 cut(s) 309, 861, 988
BshNI GGYRCC 1 cut(s) 109
BsiSI CCGG 3 cut(s) 114, 533, 707
BslFI GGGAC 1 cut(s) 442
BslI CCNNNNNNNGG 1 cut(s) 800
BsmFI GGGAC 1 cut(s) 442
BsnI GGCC 3 cut(s) 309, 861, 988
Bsp119I TTCGAA 1 cut(s) 186
Bsp19I CCATGG 2 cut(s) 54, 1050
BspACI CCGC 1 cut(s) 644
BspANI GGCC 3 cut(s) 309, 861, 988
BspCNI CTCAG 2 cut(s) 749, 851
BspHI TCATGA 1 cut(s) 921
BspLI GGNNCC 4 cut(s) 111, 376, 642, 705
BspPI GGATC 4 cut(s) 415, 437, 698, 711
BspT104I TTCGAA 1 cut(s) 186
BspT107I GGYRCC 1 cut(s) 109
BsrDI GCAATG 1 cut(s) 824
BsrI ACTGG 1 cut(s) 862
BssECI CCNNGG 6 cut(s) 54, 90, 164, 591, 929, 1050
BssT1I CCWWGG 4 cut(s) 54, 90, 164, 1050
Bst2UI CCWGG 4 cut(s) 36, 311, 379, 930
Bst4CI ACNGT 1 cut(s) 152
Bst6I CTCTTC 2 cut(s) 372, 906
BstBAI YACGTR 1 cut(s) 272
BstBI TTCGAA 1 cut(s) 186
BstC8I GCNNGC 1 cut(s) 690
BstDEI CTNAG 3 cut(s) 736, 838, 1043
BstDSI CCRYGG 2 cut(s) 54, 1050
BstF5I GGATG 2 cut(s) 979, 1060
BstHHI GCGC 1 cut(s) 260
BstMWI GCNNNNNNNGC 3 cut(s) 25, 264, 1015
BstNI CCWGG 4 cut(s) 36, 311, 379, 930
BstSCI CCNGG 5 cut(s) 34, 112, 309, 377, 928
BstV1I GCAGC 4 cut(s) 907, 1027, 1048, 1051
BstV2I GAAGAC 2 cut(s) 588, 960
BstX2I RGATCY 4 cut(s) 142, 223, 407, 703
BstXI CCANNNNNNTGG 1 cut(s) 1057
BstYI RGATCY 4 cut(s) 142, 223, 407, 703
BsuRI GGCC 3 cut(s) 309, 861, 988
BtgI CCRYGG 2 cut(s) 54, 1050
BtsCI GGATG 2 cut(s) 979, 1060
BtsIMutI CAGTG 1 cut(s) 675
Cac8I GCNNGC 1 cut(s) 690
CciI TCATGA 1 cut(s) 921
CfoI GCGC 1 cut(s) 260
CseI GACGC 1 cut(s) 8
Csp6I GTAC 4 cut(s) 110, 297, 496, 835
CviAII CATG 9 cut(s) 55, 174, 300, 419, 433, 616, 672, 922, 1051
CviQI GTAC 4 cut(s) 110, 297, 496, 835
DdeI CTNAG 3 cut(s) 736, 838, 1043
EaeI YGGCCR 2 cut(s) 859, 986
Eam1104I CTCTTC 2 cut(s) 372, 906
EarI CTCTTC 2 cut(s) 372, 906
Eco130I CCWWGG 4 cut(s) 54, 90, 164, 1050
Eco57I CTGAAG 2 cut(s) 735, 930
EcoRII CCWGG 4 cut(s) 34, 309, 377, 928
EcoT14I CCWWGG 4 cut(s) 54, 90, 164, 1050
EcoT22I ATGCAT 1 cut(s) 78
ErhI CCWWGG 4 cut(s) 54, 90, 164, 1050
FaeI CATG 9 cut(s) 58, 177, 303, 422, 436, 619, 675, 925, 1054
FaqI GGGAC 1 cut(s) 442
FatI CATG 9 cut(s) 54, 173, 299, 418, 432, 615, 671, 921, 1050
FbaI TGATCA 4 cut(s) 340, 568, 1030, 1063
FblI GTMKAC 1 cut(s) 720
Fnu4HI GCNGC 5 cut(s) 644, 896, 1016, 1037, 1040
FokI GGATG 2 cut(s) 986, 1067
Fsp4HI GCNGC 5 cut(s) 644, 896, 1016, 1037, 1040
FspBI CTAG 2 cut(s) 779, 1111
GlaI GCGC 1 cut(s) 259
GluI GCNGC 5 cut(s) 644, 896, 1016, 1037, 1040
HaeIII GGCC 3 cut(s) 309, 861, 988
HapII CCGG 3 cut(s) 114, 533, 707
HgaI GACGC 1 cut(s) 8
HhaI GCGC 1 cut(s) 260
Hin1II CATG 9 cut(s) 58, 177, 303, 422, 436, 619, 675, 925, 1054
Hin6I GCGC 1 cut(s) 258
HinP1I GCGC 1 cut(s) 258
HindIII AAGCTT 1 cut(s) 768
HinfI GANTC 2 cut(s) 183, 455
HpaII CCGG 3 cut(s) 114, 533, 707
HphI GGTGA 6 cut(s) 106, 164, 229, 265, 866, 1073
Hpy166II GTNNAC 2 cut(s) 484, 721
Hpy188I TCNGA 5 cut(s) 345, 412, 739, 825, 841
Hpy188III TCNNGA 1 cut(s) 922
Hpy8I GTNNAC 2 cut(s) 484, 721
Hpy99I CGWCG 2 cut(s) 602, 605
HpyAV CCTTC 3 cut(s) 207, 286, 794
HpyCH4III ACNGT 1 cut(s) 152
HpyCH4IV ACGT 3 cut(s) 271, 498, 661
HpyCH4V TGCA 5 cut(s) 76, 469, 675, 895, 980
HpyF10VI GCNNNNNNNGC 3 cut(s) 25, 264, 1015
HpyF3I CTNAG 3 cut(s) 736, 838, 1043
HpySE526I ACGT 3 cut(s) 271, 498, 661
Hsp92II CATG 9 cut(s) 58, 177, 303, 422, 436, 619, 675, 925, 1054
HspAI GCGC 1 cut(s) 258
KpnI GGTACC 1 cut(s) 113
Ksp22I TGATCA 4 cut(s) 340, 568, 1030, 1063
LmnI GCTCC 3 cut(s) 640, 905, 1006
Lsp1109I GCAGC 4 cut(s) 907, 1027, 1048, 1051
LweI GCATC 1 cut(s) 967
MaeI CTAG 2 cut(s) 779, 1111
MaeII ACGT 3 cut(s) 271, 498, 661
MaeIII GTNAC 1 cut(s) 152
MflI RGATCY 4 cut(s) 142, 223, 407, 703
MlsI TGGCCA 2 cut(s) 861, 988
MluCI AATT 6 cut(s) 129, 461, 510, 961, 982, 1078
MluNI TGGCCA 2 cut(s) 861, 988
MlyI GAGTC 1 cut(s) 464
MmeI TCCRAC 1 cut(s) 407
MnlI CCTC 6 cut(s) 100, 586, 631, 798, 907, 997
Mox20I TGGCCA 2 cut(s) 861, 988
Mph1103I ATGCAT 1 cut(s) 78
MroXI GAANNNNTTC 1 cut(s) 182
MscI TGGCCA 2 cut(s) 861, 988
MseI TTAA 5 cut(s) 84, 509, 732, 959, 1103
MslI CAYNNNNRTG 2 cut(s) 274, 1055
Msp20I TGGCCA 2 cut(s) 861, 988
MspI CCGG 3 cut(s) 114, 533, 707
MspR9I CCNGG 5 cut(s) 36, 114, 311, 379, 930
MvaI CCWGG 4 cut(s) 36, 311, 379, 930
MwoI GCNNNNNNNGC 3 cut(s) 25, 264, 1015
NciI CCSGG 1 cut(s) 114
NcoI CCATGG 2 cut(s) 54, 1050
NlaIII CATG 9 cut(s) 58, 177, 303, 422, 436, 619, 675, 925, 1054
NlaIV GGNNCC 4 cut(s) 111, 376, 642, 705
NmeAIII GCCGAG 1 cut(s) 616
NmuCI GTSAC 1 cut(s) 152
NsiI ATGCAT 1 cut(s) 78
NspV TTCGAA 1 cut(s) 186
PagI TCATGA 1 cut(s) 921
PcsI WCGNNNNNNNCGW 2 cut(s) 277, 594
PdmI GAANNNNTTC 1 cut(s) 182
PfeI GAWTC 1 cut(s) 183
PfoI TCCNGGA 1 cut(s) 377
PkrI GCNGC 5 cut(s) 645, 897, 1017, 1038, 1041
PleI GAGTC 1 cut(s) 463
PpsI GAGTC 1 cut(s) 463
Ppu21I YACGTR 1 cut(s) 272
PsiI TTATAA 1 cut(s) 774
Psp6I CCWGG 4 cut(s) 34, 309, 377, 928
PspGI CCWGG 4 cut(s) 34, 309, 377, 928
PspN4I GGNNCC 4 cut(s) 111, 376, 642, 705
PsuI RGATCY 4 cut(s) 142, 223, 407, 703
RsaI GTAC 4 cut(s) 111, 298, 497, 836
RsaNI GTAC 4 cut(s) 110, 297, 496, 835
RseI CAYNNNNRTG 2 cut(s) 274, 1055
SaqAI TTAA 5 cut(s) 84, 509, 732, 959, 1103
SatI GCNGC 5 cut(s) 644, 896, 1016, 1037, 1040
SchI GAGTC 1 cut(s) 464
ScrFI CCNGG 5 cut(s) 36, 114, 311, 379, 930
SfaNI GCATC 1 cut(s) 967
SfuI TTCGAA 1 cut(s) 186
SmiMI CAYNNNNRTG 2 cut(s) 274, 1055
SmlI CTYRAG 1 cut(s) 208
SmoI CTYRAG 1 cut(s) 208
Sse9I AATT 6 cut(s) 129, 461, 510, 961, 982, 1078
SsiI CCGC 1 cut(s) 644
SspMI CTAG 2 cut(s) 779, 1111
StyD4I CCNGG 5 cut(s) 34, 112, 309, 377, 928
StyI CCWWGG 4 cut(s) 54, 90, 164, 1050
TaaI ACNGT 1 cut(s) 152
TaiI ACGT 3 cut(s) 274, 501, 664
TaqI TCGA 2 cut(s) 186, 1070
TasI AATT 6 cut(s) 129, 461, 510, 961, 982, 1078
TatI WGTACW 1 cut(s) 834
TauI GCSGC 1 cut(s) 646
TfiI GAWTC 1 cut(s) 183
Tru1I TTAA 5 cut(s) 84, 509, 732, 959, 1103
Tru9I TTAA 5 cut(s) 84, 509, 732, 959, 1103
TscAI CASTG 1 cut(s) 682
TseFI GTSAC 1 cut(s) 152
TseI GCWGC 4 cut(s) 895, 1015, 1036, 1039
Tsp45I GTSAC 1 cut(s) 152
TspDTI ATGAA 4 cut(s) 78, 459, 632, 910
TspRI CASTG 1 cut(s) 682
XmiI GTMKAC 1 cut(s) 720
XmnI GAANNNNTTC 1 cut(s) 182
XspI CTAG 2 cut(s) 779, 1111
Zsp2I ATGCAT 1 cut(s) 78
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.