Rh5CG233900
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000076
Physical Location & Seq
Reverse (-)
24317240 .. 24327432
10193 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG233900.1

Sequence Viewer

Length: 2553 bp
ATGGATATCCATGAGGATGGTAATGAATTACATGACGAGCATCATCTTCTTCCGGGCTACAGGTTCTGCCCCTTGGAGGAGGAACTAATCCTCCGCTATCTATGTCCCAAGGTCAAAGGAGAAGAGGTACCCGGTGAAGACTATTTGATTTTCAACTCCAATTTGTACGGTGAACAAGAGCCCTGGGACATATGGGACATGTACAAAGAAAGACGAAAGAACGACTTGAGGTTCAACAAAGATCTCTACTTCTTCACTCAACGAAAGAAGATGACTGTGAATGCCTCCCGGAAGGGCCGATCTATCGGAAGCGGCACCTGGAAAGCGGGGGACGCTGCCAAGAACGTATACGCAAGTGGCATTGTTGTAGGTTACAGGAAAAGATTTACTTATGAGAAAAAGGGGTCTGAGCAACATGGCAGATGGATCATGCTCGAGTTCGAACTTGATCACTCGCAAGTAGGCATGCTTGACGAACAAGAGGCACAAAAATATGTTCTATGCATCCTTAGGAAAAATGAGGGATCCAAAGAGAAAAGGAAACGGGTTGATGATGATGACCGGGAGAAGCTTGCAACCGGAGATGATGTCCCCGATGATTGTCAAGCACTGGATGGATATAAGAATGTGAAACAAGAGGAATCCGAAATTAAACCAGGAGAGGAAGATCAACTAATGCATGCAATTACCGGAGATGTCCGCGATGCTGGTCCATCATTATCTTCTGAACTGCAAGGGGAAGAAAACTGTTGGGTGCAATACCTGAGCCCTATACTATTAGTTCACGATGACAATGTGCTGCCACCATATGCAGATGCCTTGCAGTGGGAAGAAGAAAATTATTTGGGTAAACAATCCACTGTGCCAGGCTTCGAGGACAATGTGCAACCATTTCTAGTAGCTGATCATGAACTGCAAAGGAAAGCAGAAAATTGCCGAAAGCAATGCCTAGAACATAGGCCATTGGTGCCACCATTTACAGCTGATTGCGAAATAATGATCCACATGCTAGGGGCAGAGAATTATTTGTCGAAACAGTGCCCTGTGCAATGCATCTACTGTGACTTTGCAGCAGCTAACGAACTGAGTAATATCTACATGTTGGGGGAAGAGCATCCTGTACCAAGAGTAGCTGAACAAGAGGGTAGTAGCTTGAAAGAGAAACAAAATGCAAGCATGGTCAGTACTTCAACTGATCATCAGCCTGACATGGTTGCCTCGAAAAGTACTTCAACTGATCATCATCGAGCTGATGATCCTATAGGAAGCAACGATGTTGATGAAGGGTTGGCTGCAGGTACTCATGGTTTCAAATATAACCCTTGGATACTATCTTTTTCAGAGGAGCTGCTACGTGGGGCTCGATCAAAATCTAAGGCCTCCCTCGGGCTCTCTGTTTCTGTTAGCTGCTGCTCTTCCTCTAGCGGTGAAGCTTTCGGTGCAAGAACCCAACACTGCTCTCATCTGTCACTTCATCTTCATATGGCTTCGAATTTGATTTCTTCGAATTCAAGTACTCATAGTGTTGGAAATGAGATTGTACCTGCAACACAGCAAGGAGAAGCAACTGTTAATGAATTGGAACCGAAAACAGCTCATAACCGAATCGAACAGAACGAGGATTTTGCAGACATTCTTAATGTTAGATTTCAGTCACTTTCACCTCCTTTTATGAGGGATCCCAACAAGGTACTTCGACATAATCTGCAGCCCTTTAATAATTTGAAATACTTGGAGCTGTTTCTTCATGGCTGCTGCTCTTGGAAAATACTGACAATGTTGCTCAAGATGTCGCCCAATCTGGAACAGCTTTTCTTGCAAAATTTTGAAGATGGTTTATGTTATGGTCGGGTTAGCTGTTTTGTATACCATGGAAGCCGAGATGAGATGGATTTGATGAAGTACTTGTTGAAGCATAGCAAAGTCATGAAAAAGATGACCATGTTCACTTGTGATTTCCATACAGAAGATGAGATGAAGCTGGAAATTGCCAATTACGAAAGGGCAAACTTCAGCAATTGTGAGGGAAGGAACCAGAATGATTTAGGTTCGTCATTGCTCTGGTCAGCTGTCACTGTTCGCCAGTTGGAAGGGAAAATATTGAAACAGATATCAGACCCGGACACTGAAAGTCGTTGTAATCTGCCTAAACTAAATAATTTGAAGCATTTGGAGCTACAACTGGAAAACTGCTGCTCTTGGCAATTACTGACCAGATTGCTCACTATATCGCCAAATCTGGAATATCTTGTACTGGAAATTAACATACAATGTTGTGAGTATCCTAACGAGGATGGCTGGTCTCCACCAAAGCTTGTGCCTATTTGTTTGGTCTCATGCCTTAAAAATCTGTTCATACGCGGATTCAAGGGAAAGCCAGATGATATAGAAGTTGCAAAGTACTTGATGAAGTATGGTGAAGTCTTGAATAATGTAACAATTTATTCTTGTGATGTCCCTGCAGAAGACATGTTGAAGGTATCCCAAGAAATTTCGATGTCCCCAAAGGGTTCAAACACTTGTCAAGTCGAATTTCCAAAGATTGATATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

850

Amino Acids

96.77

Weight (kDa)

5.23

Isoelectric Point (pI)

46.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 18 - 149 1.7e-23 No apical meristem (NAM) protein
FBD PF08387 623 - 647 4.5e-06 FBD
FBD PF08387 770 - 814 9.9e-09 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1286, 1552
Acc65I GGTACC 1 cut(s) 127
AccB1I GGYRCC 3 cut(s) 127, 314, 967
AccI GTMKAC 2 cut(s) 348, 1866
AccII CGCG 2 cut(s) 702, 2361
AciI CCGC 6 cut(s) 94, 312, 326, 700, 1425, 2361
AclWI GGATC 7 cut(s) 434, 519, 532, 994, 1250, 1673, 1686
AcsI RAATTY 5 cut(s) 1492, 1507, 1822, 2490, 2531
AcuI CTGAAG 1 cut(s) 1996
AfiI CCNNNNNNNGG 3 cut(s) 76, 825, 1386
AflIII ACRYGT 3 cut(s) 198, 1098, 2469
AjnI CCWGG 4 cut(s) 182, 317, 655, 865
AloI GAACNNNNNNTCC 2 cut(s) 75, 107
Alw26I GTCTC 2 cut(s) 2307, 2338
AlwI GGATC 7 cut(s) 434, 519, 532, 994, 1250, 1673, 1686
AlwNI CAGNNNCTG 1 cut(s) 66
Ama87I CYCGRG 2 cut(s) 434, 1385
AoxI GGCC 3 cut(s) 295, 959, 1377
ApoI RAATTY 5 cut(s) 1492, 1507, 1822, 2490, 2531
Asp718I GGTACC 1 cut(s) 127
AspS9I GGNCC 2 cut(s) 295, 710
AsuC2I CCSGG 5 cut(s) 54, 132, 289, 563, 2120
AsuHPI GGTGA 5 cut(s) 146, 182, 1439, 1653, 2429
AsuII TTCGAA 3 cut(s) 441, 1490, 1505
AvaI CYCGRG 2 cut(s) 434, 1385
AvaII GGWCC 1 cut(s) 710
AxyI CCTNAGG 1 cut(s) 509
BaeGI GKGCMC 1 cut(s) 1043
BamHI GGATCC 2 cut(s) 524, 1678
BanI GGYRCC 3 cut(s) 127, 314, 967
BanII GRGCYC 4 cut(s) 183, 770, 1363, 1392
BbsI GAAGAC 2 cut(s) 144, 2472
BccI CCATC 7 cut(s) 11, 417, 608, 721, 1826, 1882, 2288
BcgI CGANNNNNNTGC 4 cut(s) 927, 961, 1607, 1641
BciT130I CCWGG 4 cut(s) 184, 319, 657, 867
BciVI GTATCC 3 cut(s) 1320, 2292, 2491
BclI TGATCA 4 cut(s) 448, 904, 1195, 1237
BcnI CCSGG 5 cut(s) 54, 132, 289, 563, 2120
BcoDI GTCTC 2 cut(s) 2307, 2338
BfaI CTAG 4 cut(s) 896, 950, 1010, 1422
BfmI CTRYAG 5 cut(s) 58, 1260, 1293, 1706, 2460
BfuAI ACCTGC 2 cut(s) 1286, 1552
BfuI GTATCC 3 cut(s) 1320, 2292, 2491
BglII AGATCT 1 cut(s) 241
BmcAI AGTACT 5 cut(s) 1186, 1228, 1516, 1904, 2402
Bme1390I CCNGG 9 cut(s) 54, 132, 184, 289, 319, 563, 657, 867, 2120
Bme18I GGWCC 1 cut(s) 710
BmeT110I CYCGRG 2 cut(s) 434, 1385
BmgT120I GGNCC 2 cut(s) 295, 710
BmiI GGNNCC 7 cut(s) 129, 316, 526, 969, 1584, 1680, 2033
BmrFI CCNGG 9 cut(s) 54, 132, 184, 289, 319, 563, 657, 867, 2120
BmsI GCATC 6 cut(s) 49, 513, 694, 805, 1062, 1123
BpiI GAAGAC 2 cut(s) 144, 2472
Bpu10I CCTNAGC 1 cut(s) 764
Bpu14I TTCGAA 3 cut(s) 441, 1490, 1505
BpuEI CTTGAG 2 cut(s) 247, 1769
BpuMI CCSGG 5 cut(s) 54, 132, 289, 563, 2120
BsaAI YACGTR 1 cut(s) 1355
BsaBI GATNNNNATC 2 cut(s) 1242, 1369
BsaI GGTCTC 2 cut(s) 2307, 2338
BsaJI CCNNGG 7 cut(s) 72, 108, 182, 183, 1322, 1384, 1870
BsaWI WCCGGW 2 cut(s) 578, 689
BsaXI ACNNNNNCTCC 6 cut(s) 75, 105, 111, 141, 573, 603
Bsc4I CCNNNNNNNGG 3 cut(s) 76, 825, 1386
Bse1I ACTGG 4 cut(s) 615, 2083, 2187, 2259
Bse21I CCTNAGG 1 cut(s) 509
Bse3DI GCAATG 3 cut(s) 950, 1055, 2054
Bse8I GATNNNNATC 2 cut(s) 1242, 1369
BseBI CCWGG 4 cut(s) 184, 319, 657, 867
BseDI CCNNGG 7 cut(s) 72, 108, 182, 183, 1322, 1384, 1870
BseGI GGATG 5 cut(s) 22, 504, 619, 1114, 2299
BseJI GATNNNNATC 2 cut(s) 1242, 1369
BseLI CCNNNNNNNGG 3 cut(s) 76, 825, 1386
BseMI GCAATG 3 cut(s) 950, 1055, 2054
BseMII CTCAG 3 cut(s) 399, 755, 1076
BseNI ACTGG 4 cut(s) 615, 2083, 2187, 2259
BseRI GAGGAG 2 cut(s) 92, 1358
BseSI GKGCMC 1 cut(s) 1043
Bsh1236I CGCG 2 cut(s) 702, 2361
BshFI GGCC 3 cut(s) 297, 961, 1379
BshNI GGYRCC 3 cut(s) 127, 314, 967
BsiHKCI CYCGRG 2 cut(s) 434, 1385
BsiSI CCGG 7 cut(s) 53, 132, 289, 562, 579, 690, 2120
BslFI GGGAC 7 cut(s) 90, 200, 209, 344, 575, 2441, 2485
BslI CCNNNNNNNGG 3 cut(s) 76, 825, 1386
BsmAI GTCTC 2 cut(s) 2307, 2338
BsmFI GGGAC 7 cut(s) 90, 200, 209, 344, 575, 2441, 2485
BsmI GAATGC 1 cut(s) 286
BsnI GGCC 3 cut(s) 297, 961, 1379
Bso31I GGTCTC 2 cut(s) 2307, 2338
BsoBI CYCGRG 2 cut(s) 434, 1385
Bsp119I TTCGAA 3 cut(s) 441, 1490, 1505
Bsp1286I GDGCHC 5 cut(s) 183, 770, 1043, 1363, 1392
Bsp1407I TGTACA 1 cut(s) 201
Bsp19I CCATGG 1 cut(s) 1870
BspACI CCGC 6 cut(s) 94, 312, 326, 700, 1425, 2361
BspANI GGCC 3 cut(s) 297, 961, 1379
BspCNI CTCAG 3 cut(s) 400, 756, 1077
BspFNI CGCG 2 cut(s) 702, 2361
BspHI TCATGA 2 cut(s) 907, 1926
BspLI GGNNCC 7 cut(s) 129, 316, 526, 969, 1584, 1680, 2033
BspMAI CTGCAG 3 cut(s) 1297, 1710, 2464
BspMI ACCTGC 2 cut(s) 1286, 1552
BspPI GGATC 7 cut(s) 434, 519, 532, 994, 1250, 1673, 1686
BspQI GCTCTTC 2 cut(s) 1104, 1420
BspT104I TTCGAA 3 cut(s) 441, 1490, 1505
BspT107I GGYRCC 3 cut(s) 127, 314, 967
BspTNI GGTCTC 2 cut(s) 2307, 2338
BsrDI GCAATG 3 cut(s) 950, 1055, 2054
BsrGI TGTACA 1 cut(s) 201
BsrI ACTGG 4 cut(s) 615, 2083, 2187, 2259
BssECI CCNNGG 7 cut(s) 72, 108, 182, 183, 1322, 1384, 1870
BssNAI GTATAC 2 cut(s) 349, 1867
BssT1I CCWWGG 4 cut(s) 72, 108, 1322, 1870
Bst1107I GTATAC 2 cut(s) 349, 1867
Bst2UI CCWGG 4 cut(s) 184, 319, 657, 867
Bst4CI ACNGT 8 cut(s) 170, 277, 749, 862, 1038, 1061, 1570, 2077
Bst6I CTCTTC 3 cut(s) 117, 1104, 1420
BstAUI TGTACA 1 cut(s) 201
BstBAI YACGTR 1 cut(s) 1355
BstBI TTCGAA 3 cut(s) 441, 1490, 1505
BstC8I GCNNGC 4 cut(s) 467, 573, 681, 1174
BstDEI CTNAG 5 cut(s) 408, 509, 764, 1085, 1374
BstDSI CCRYGG 1 cut(s) 1870
BstF5I GGATG 5 cut(s) 22, 504, 619, 1114, 2299
BstFNI CGCG 2 cut(s) 702, 2361
BstMAI GTCTC 2 cut(s) 2307, 2338
BstMWI GCNNNNNNNGC 5 cut(s) 332, 967, 1439, 1816, 2173
BstNI CCWGG 4 cut(s) 184, 319, 657, 867
BstNSI RCATGY 6 cut(s) 202, 469, 683, 1009, 1102, 2473
BstSCI CCNGG 9 cut(s) 52, 130, 182, 287, 317, 561, 655, 865, 2118
BstSFI CTRYAG 5 cut(s) 58, 1260, 1293, 1706, 2460
BstSLI GKGCMC 1 cut(s) 1043
BstUI CGCG 2 cut(s) 702, 2361
BstV2I GAAGAC 2 cut(s) 144, 2472
BstX2I RGATCY 3 cut(s) 241, 524, 1678
BstXI CCANNNNNNTGG 1 cut(s) 17
BstYI RGATCY 3 cut(s) 241, 524, 1678
BstZ17I GTATAC 2 cut(s) 349, 1867
Bsu36I CCTNAGG 1 cut(s) 509
BsuI GTATCC 3 cut(s) 1320, 2292, 2491
BsuRI GGCC 3 cut(s) 297, 961, 1379
BtgI CCRYGG 1 cut(s) 1870
BtgZI GCGATG 1 cut(s) 717
BtsCI GGATG 5 cut(s) 22, 504, 619, 1114, 2299
BtsI GCAGTG 2 cut(s) 830, 1453
BtsIMutI CAGTG 7 cut(s) 608, 830, 858, 1043, 1453, 2073, 2124
BveI ACCTGC 2 cut(s) 1286, 1552
Cac8I GCNNGC 4 cut(s) 467, 573, 681, 1174
CaiI CAGNNNCTG 1 cut(s) 66
CciI TCATGA 2 cut(s) 907, 1926
Cfr13I GGNCC 2 cut(s) 295, 710
CseI GACGC 1 cut(s) 341
DdeI CTNAG 5 cut(s) 408, 509, 764, 1085, 1374
Eam1104I CTCTTC 3 cut(s) 117, 1104, 1420
EarI CTCTTC 3 cut(s) 117, 1104, 1420
Eco130I CCWWGG 4 cut(s) 72, 108, 1322, 1870
Eco147I AGGCCT 1 cut(s) 1379
Eco24I GRGCYC 4 cut(s) 183, 770, 1363, 1392
Eco31I GGTCTC 2 cut(s) 2307, 2338
Eco32I GATATC 2 cut(s) 7, 2112
Eco47I GGWCC 1 cut(s) 710
Eco57I CTGAAG 1 cut(s) 1996
Eco81I CCTNAGG 1 cut(s) 509
Eco88I CYCGRG 2 cut(s) 434, 1385
EcoRI GAATTC 1 cut(s) 1507
EcoRII CCWGG 4 cut(s) 182, 317, 655, 865
EcoRV GATATC 2 cut(s) 7, 2112
EcoT14I CCWWGG 4 cut(s) 72, 108, 1322, 1870
EcoT22I ATGCAT 3 cut(s) 506, 681, 1055
EcoT38I GRGCYC 4 cut(s) 183, 770, 1363, 1392
ErhI CCWWGG 4 cut(s) 72, 108, 1322, 1870
FalI AAGNNNNNCTT 4 cut(s) 209, 241, 373, 405
FaqI GGGAC 7 cut(s) 90, 200, 209, 344, 575, 2441, 2485
FauI CCCGC 1 cut(s) 319
FauNDI CATATG 3 cut(s) 191, 808, 1482
FbaI TGATCA 4 cut(s) 448, 904, 1195, 1237
FblI GTMKAC 2 cut(s) 348, 1866
FokI GGATG 5 cut(s) 29, 491, 626, 1101, 2306
FriOI GRGCYC 4 cut(s) 183, 770, 1363, 1392
FspBI CTAG 4 cut(s) 896, 950, 1010, 1422
HaeIII GGCC 3 cut(s) 297, 961, 1379
HapII CCGG 7 cut(s) 53, 132, 289, 562, 579, 690, 2120
HgaI GACGC 1 cut(s) 341
HindIII AAGCTT 3 cut(s) 569, 1431, 2312
HinfI GANTC 3 cut(s) 641, 1605, 2364
HpaII CCGG 7 cut(s) 53, 132, 289, 562, 579, 690, 2120
HphI GGTGA 5 cut(s) 146, 182, 1439, 1653, 2429
Hpy166II GTNNAC 6 cut(s) 173, 349, 784, 851, 1867, 1947
Hpy188I TCNGA 6 cut(s) 308, 409, 646, 727, 1342, 2116
Hpy188III TCNNGA 7 cut(s) 785, 908, 1786, 1802, 1927, 2240, 2425
Hpy8I GTNNAC 6 cut(s) 173, 349, 784, 851, 1867, 1947
HpyAV CCTTC 5 cut(s) 286, 1277, 2022, 2084, 2470
HpyCH4III ACNGT 8 cut(s) 170, 277, 749, 862, 1038, 1061, 1570, 2077
HpyCH4IV ACGT 2 cut(s) 345, 1354
HpyF10VI GCNNNNNNNGC 5 cut(s) 332, 967, 1439, 1816, 2173
HpyF3I CTNAG 5 cut(s) 408, 509, 764, 1085, 1374
HpySE526I ACGT 2 cut(s) 345, 1354
KpnI GGTACC 1 cut(s) 131
Ksp22I TGATCA 4 cut(s) 448, 904, 1195, 1237
LguI GCTCTTC 2 cut(s) 1104, 1420
LmnI GCTCC 3 cut(s) 1345, 1735, 2173
LweI GCATC 6 cut(s) 49, 513, 694, 805, 1062, 1123
MaeI CTAG 4 cut(s) 896, 950, 1010, 1422
MaeII ACGT 2 cut(s) 345, 1354
MaeIII GTNAC 6 cut(s) 371, 1061, 1467, 1653, 2071, 2434
MfeI CAATTG 1 cut(s) 2017
MflI RGATCY 3 cut(s) 241, 524, 1678
MhlI GDGCHC 5 cut(s) 183, 770, 1043, 1363, 1392
MmeI TCCRAC 2 cut(s) 1507, 2067
Mph1103I ATGCAT 3 cut(s) 506, 681, 1055
MseI TTAA 6 cut(s) 651, 1572, 1638, 1716, 2262, 2343
MslI CAYNNNNRTG 1 cut(s) 15
MspA1I CMGCKG 2 cut(s) 983, 2069
MspI CCGG 7 cut(s) 53, 132, 289, 562, 579, 690, 2120
MspR9I CCNGG 9 cut(s) 54, 132, 184, 289, 319, 563, 657, 867, 2120
MunI CAATTG 1 cut(s) 2017
Mva1269I GAATGC 1 cut(s) 286
MvaI CCWGG 4 cut(s) 184, 319, 657, 867
MvnI CGCG 2 cut(s) 702, 2361
MwoI GCNNNNNNNGC 5 cut(s) 332, 967, 1439, 1816, 2173
NciI CCSGG 5 cut(s) 54, 132, 289, 563, 2120
NcoI CCATGG 1 cut(s) 1870
NdeI CATATG 3 cut(s) 191, 808, 1482
NlaIV GGNNCC 7 cut(s) 129, 316, 526, 969, 1584, 1680, 2033
NmeAIII GCCGAG 1 cut(s) 1904
NmuCI GTSAC 4 cut(s) 1061, 1467, 1653, 2071
NsiI ATGCAT 3 cut(s) 506, 681, 1055
NspI RCATGY 6 cut(s) 202, 469, 683, 1009, 1102, 2473
NspV TTCGAA 3 cut(s) 441, 1490, 1505
PaeI GCATGC 2 cut(s) 469, 683
PaeR7I CTCGAG 1 cut(s) 434
PagI TCATGA 2 cut(s) 907, 1926
PasI CCCWGGG 1 cut(s) 183
PceI AGGCCT 1 cut(s) 1379
PciI ACATGT 3 cut(s) 198, 1098, 2469
PciSI GCTCTTC 2 cut(s) 1104, 1420
PcsI WCGNNNNNNNCGW 2 cut(s) 1360, 1614
PctI GAATGC 1 cut(s) 286
PfeI GAWTC 3 cut(s) 641, 1605, 2364
PfoI TCCNGGA 1 cut(s) 287
Ppu21I YACGTR 1 cut(s) 1355
PscI ACATGT 3 cut(s) 198, 1098, 2469
Psp6I CCWGG 4 cut(s) 182, 317, 655, 865
PspGI CCWGG 4 cut(s) 182, 317, 655, 865
PspN4I GGNNCC 7 cut(s) 129, 316, 526, 969, 1584, 1680, 2033
PspPI GGNCC 2 cut(s) 295, 710
PspXI VCTCGAGB 1 cut(s) 434
PstI CTGCAG 3 cut(s) 1297, 1710, 2464
PstNI CAGNNNCTG 1 cut(s) 66
PsuI RGATCY 3 cut(s) 241, 524, 1678
PvuII CAGCTG 2 cut(s) 983, 2069
RseI CAYNNNNRTG 1 cut(s) 15
SapI GCTCTTC 2 cut(s) 1104, 1420
SaqAI TTAA 6 cut(s) 651, 1572, 1638, 1716, 2262, 2343
Sau96I GGNCC 2 cut(s) 295, 710
ScaI AGTACT 5 cut(s) 1186, 1228, 1516, 1904, 2402
ScrFI CCNGG 9 cut(s) 54, 132, 184, 289, 319, 563, 657, 867, 2120
SduI GDGCHC 5 cut(s) 183, 770, 1043, 1363, 1392
SfaNI GCATC 6 cut(s) 49, 513, 694, 805, 1062, 1123
SfcI CTRYAG 5 cut(s) 58, 1260, 1293, 1706, 2460
Sfr274I CTCGAG 1 cut(s) 434
SfuI TTCGAA 3 cut(s) 441, 1490, 1505
SinI GGWCC 1 cut(s) 710
SlaI CTCGAG 1 cut(s) 434
SmiMI CAYNNNNRTG 1 cut(s) 15
SmlI CTYRAG 3 cut(s) 226, 434, 1784
SmoI CTYRAG 3 cut(s) 226, 434, 1784
SphI GCATGC 2 cut(s) 469, 683
SseBI AGGCCT 1 cut(s) 1379
SsiI CCGC 6 cut(s) 94, 312, 326, 700, 1425, 2361
SspI AATATT 1 cut(s) 2100
SspMI CTAG 4 cut(s) 896, 950, 1010, 1422
StuI AGGCCT 1 cut(s) 1379
StyD4I CCNGG 9 cut(s) 52, 130, 182, 287, 317, 561, 655, 865, 2118
StyI CCWWGG 4 cut(s) 72, 108, 1322, 1870
TaaI ACNGT 8 cut(s) 170, 277, 749, 862, 1038, 1061, 1570, 2077
TaiI ACGT 2 cut(s) 348, 1357
TatI WGTACW 7 cut(s) 201, 1184, 1226, 1514, 1902, 2251, 2400
TauI GCSGC 1 cut(s) 315
TfiI GAWTC 3 cut(s) 641, 1605, 2364
Tru1I TTAA 6 cut(s) 651, 1572, 1638, 1716, 2262, 2343
Tru9I TTAA 6 cut(s) 651, 1572, 1638, 1716, 2262, 2343
TscAI CASTG 7 cut(s) 615, 830, 865, 1043, 1460, 2080, 2131
TseFI GTSAC 4 cut(s) 1061, 1467, 1653, 2071
Tsp45I GTSAC 4 cut(s) 1061, 1467, 1653, 2071
TspRI CASTG 7 cut(s) 615, 830, 865, 1043, 1460, 2080, 2131
VpaK11BI GGWCC 1 cut(s) 710
XapI RAATTY 5 cut(s) 1492, 1507, 1822, 2490, 2531
XceI RCATGY 6 cut(s) 202, 469, 683, 1009, 1102, 2473
XhoI CTCGAG 1 cut(s) 434
XmiI GTMKAC 2 cut(s) 348, 1866
XspI CTAG 4 cut(s) 896, 950, 1010, 1422
ZrmI AGTACT 5 cut(s) 1186, 1228, 1516, 1904, 2402
Zsp2I ATGCAT 3 cut(s) 506, 681, 1055
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.