Prupe.3G065000_v2.0.a1

No apical meristem (NAM) protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000076
Physical Location & Seq
Reverse (-)
4659001 .. 4660141
1141 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G065000.1

Sequence Viewer

Length: 1125 bp
ATGGCACCTTGTGAGTATGTTGATGTTCCAATTGGATTCAAGTTTCATCCAAGCGATGATGAGTTATTGAGATATTATCTTCTTAACAAGGTTTGTGGCACACCATTTATGTATAGCAACGTTGTGCCAGAATTTAATCTTTATGGTAAGAAAGAGCCATGGGATATATGGAATGATTTCGGTGGACAAAAATTAGAAAAGGGTGAAGACCTCTACTTCTTCACCAAATTGAAGTTAGTGACCAGCAAGGGTTCCCTCGTGGCTCGAACGATAGGAAATGGAACCTGGAAAGGTGAGGACAGAGGGACCATGGTCGGTGATCCCGCGAAAAAGAATAAGCCTTTAGGTCTGTGTAAAAGGTTCCGTTATGAGAATGATAAATCTGATCAACATGGCCGCTGGATTATGCACGAGTACAGCCTTCACCCTTCATTGGTGAAGCCCCATTCAAATTCAAATACTTGTGGTGGTGATGGTAAATACGTGCTCTGTCAAATTCGAAAGAATGACAGAAAGAGGAAGTTATCAGAGAATGATGGCGTCGGTGGTCATGCTCTAGTACTACAATCCCCTACCACGATTCTAAGGCAACTAAAGAACATTGATGAAGTCGTAGGTGCGAATTTTACTCCAATTTCTGAGGCTTCTGAGGTTAATTATCATTATAATCAGCAGCAGGAGCAGACTACCAGTGCGAATGCGTACTTGCCAATGAATCAGCCACACTACTTTCTTACAGATTACCCAACAACTATGGCCTCTGCATCAACTAGTCCTCCACCATCTCTCCCTCAGCCAGACTATGGCTTTGAGCTTATTAGTGACACTGATCATCAACCAACACAAGGTTTTAATTATGACCTCAGCCAATTTCTAGATGATGATGATGTTGATGCATTGATGAAGGATCTCTCAAATTTGGATAACATCCAACCACTTGCAGCACAACCATTGGGAGGAGGATCGCATCCATATCCATCCATAATCCAGGAGTCTGCAGTTGATGAAGACTCGGGCAATATTATTAATAGTGGATTTGGGATATCATCAGAAGATCAAACAGGTGGTGAACTTGGTGCTGAAAATGTTCAACTCAATGTGTTAGGCTTTCCTGAACCGTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

375

Amino Acids

41.61

Weight (kDa)

4.92

Isoelectric Point (pI)

40.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 666
AccB1I GGYRCC 1 cut(s) 4
AccB7I CCANNNNNTGG 1 cut(s) 803
AccII CGCG 1 cut(s) 326
AciI CCGC 2 cut(s) 324, 397
AclI AACGTT 1 cut(s) 120
AclWI GGATC 3 cut(s) 314, 915, 970
AcoI YGGCCR 1 cut(s) 394
AcsI RAATTY 5 cut(s) 131, 451, 495, 622, 916
AcyI GRCGYC 1 cut(s) 540
AdeI CACNNNGTG 1 cut(s) 11
AfaI GTAC 3 cut(s) 416, 561, 704
AfiI CCNNNNNNNGG 4 cut(s) 433, 803, 845, 956
AgsI TTSAA 5 cut(s) 40, 232, 450, 456, 1091
AhlI ACTAGT 1 cut(s) 770
AjnI CCWGG 2 cut(s) 284, 987
AluBI AGCT 1 cut(s) 814
AluI AGCT 1 cut(s) 814
Alw21I GWGCWC 1 cut(s) 489
AlwI GGATC 3 cut(s) 314, 915, 970
Ama87I CYCGRG 1 cut(s) 1012
AoxI GGCC 2 cut(s) 394, 756
ApeKI GCWGC 2 cut(s) 673, 941
ApoI RAATTY 5 cut(s) 131, 451, 495, 622, 916
ArsI GACNNNNNNTTYG 2 cut(s) 791, 823
AseI ATTAAT 1 cut(s) 1026
Asp700I GAANNNNTTC 2 cut(s) 176, 1086
AspS9I GGNCC 1 cut(s) 306
AsuHPI GGTGA 8 cut(s) 214, 215, 305, 329, 416, 448, 482, 1079
AsuII TTCGAA 1 cut(s) 499
AvaI CYCGRG 1 cut(s) 1012
AvaII GGWCC 1 cut(s) 306
BanI GGYRCC 1 cut(s) 4
BauI CACGAG 2 cut(s) 257, 410
BbsI GAAGAC 2 cut(s) 213, 1014
Bbv12I GWGCWC 1 cut(s) 489
BbvCI CCTCAGC 2 cut(s) 792, 863
BbvI GCAGC 2 cut(s) 685, 953
BccI CCATC 4 cut(s) 467, 530, 790, 985
BciT130I CCWGG 2 cut(s) 286, 989
BclI TGATCA 2 cut(s) 385, 829
BcuI ACTAGT 1 cut(s) 770
BfaI CTAG 4 cut(s) 557, 771, 875, 1123
BfmI CTRYAG 1 cut(s) 996
BisI GCNGC 3 cut(s) 397, 674, 942
BlsI GCNGC 3 cut(s) 398, 675, 943
BmcAI AGTACT 1 cut(s) 561
Bme1390I CCNGG 2 cut(s) 286, 989
Bme18I GGWCC 1 cut(s) 306
BmeT110I CYCGRG 1 cut(s) 1012
BmgT120I GGNCC 1 cut(s) 306
BmiI GGNNCC 5 cut(s) 6, 253, 283, 307, 362
BmrFI CCNGG 2 cut(s) 286, 989
BmsI GCATC 3 cut(s) 773, 883, 976
BoxI GACNNNNGTC 1 cut(s) 311
BpiI GAAGAC 2 cut(s) 213, 1014
Bpu10I CCTNAGC 2 cut(s) 792, 863
Bpu14I TTCGAA 1 cut(s) 499
BsaAI YACGTR 1 cut(s) 484
BsaHI GRCGYC 1 cut(s) 540
BsaJI CCNNGG 2 cut(s) 158, 309
BsaXI ACNNNNNCTCC 4 cut(s) 760, 771, 790, 801
Bsc4I CCNNNNNNNGG 4 cut(s) 433, 803, 845, 956
Bse1I ACTGG 1 cut(s) 690
BseBI CCWGG 2 cut(s) 286, 989
BseDI CCNNGG 2 cut(s) 158, 309
BseGI GGATG 4 cut(s) 46, 927, 967, 977
BseLI CCNNNNNNNGG 4 cut(s) 433, 803, 845, 956
BseMII CTCAG 4 cut(s) 630, 639, 806, 877
BseNI ACTGG 1 cut(s) 690
BseRI GAGGAG 1 cut(s) 972
BseXI GCAGC 2 cut(s) 685, 953
Bsh1236I CGCG 1 cut(s) 326
BshFI GGCC 2 cut(s) 396, 758
BshNI GGYRCC 1 cut(s) 4
BsiHKAI GWGCWC 1 cut(s) 489
BsiHKCI CYCGRG 1 cut(s) 1012
BslFI GGGAC 1 cut(s) 319
BslI CCNNNNNNNGG 4 cut(s) 433, 803, 845, 956
BsmFI GGGAC 1 cut(s) 319
BsmI GAATGC 1 cut(s) 703
BsnI GGCC 2 cut(s) 396, 758
BsoBI CYCGRG 1 cut(s) 1012
Bsp119I TTCGAA 1 cut(s) 499
Bsp1286I GDGCHC 1 cut(s) 489
Bsp143I GATC 6 cut(s) 319, 385, 829, 907, 962, 1054
Bsp19I CCATGG 2 cut(s) 158, 309
BspACI CCGC 2 cut(s) 324, 397
BspANI GGCC 2 cut(s) 396, 758
BspCNI CTCAG 4 cut(s) 631, 640, 805, 876
BspFNI CGCG 1 cut(s) 326
BspLI GGNNCC 5 cut(s) 6, 253, 283, 307, 362
BspMAI CTGCAG 1 cut(s) 1000
BspPI GGATC 3 cut(s) 314, 915, 970
BspT104I TTCGAA 1 cut(s) 499
BspT107I GGYRCC 1 cut(s) 4
BsrI ACTGG 1 cut(s) 690
BssECI CCNNGG 2 cut(s) 158, 309
BssMI GATC 6 cut(s) 319, 385, 829, 907, 962, 1054
BssNI GRCGYC 1 cut(s) 540
BssSI CACGAG 2 cut(s) 257, 410
BssT1I CCWWGG 2 cut(s) 158, 309
Bst2BI CACGAG 2 cut(s) 257, 410
Bst2UI CCWGG 2 cut(s) 286, 989
Bst4CI ACNGT 1 cut(s) 1119
BstACI GRCGYC 1 cut(s) 540
BstBAI YACGTR 1 cut(s) 484
BstBI TTCGAA 1 cut(s) 499
BstDEI CTNAG 5 cut(s) 584, 639, 648, 792, 863
BstDSI CCRYGG 2 cut(s) 158, 309
BstF5I GGATG 4 cut(s) 46, 927, 967, 977
BstFNI CGCG 1 cut(s) 326
BstKTI GATC 6 cut(s) 322, 388, 832, 910, 965, 1057
BstMBI GATC 6 cut(s) 319, 385, 829, 907, 962, 1054
BstMWI GCNNNNNNNGC 1 cut(s) 679
BstNI CCWGG 2 cut(s) 286, 989
BstPAI GACNNNNGTC 1 cut(s) 311
BstSCI CCNGG 2 cut(s) 284, 987
BstSFI CTRYAG 1 cut(s) 996
BstUI CGCG 1 cut(s) 326
BstV1I GCAGC 2 cut(s) 685, 953
BstV2I GAAGAC 2 cut(s) 213, 1014
BstX2I RGATCY 1 cut(s) 907
BstYI RGATCY 1 cut(s) 907
BsuRI GGCC 2 cut(s) 396, 758
BtgI CCRYGG 2 cut(s) 158, 309
BtgZI GCGATG 1 cut(s) 69
BtsCI GGATG 4 cut(s) 46, 927, 967, 977
BtsIMutI CAGTG 2 cut(s) 697, 825
Cfr13I GGNCC 1 cut(s) 306
CseI GACGC 1 cut(s) 529
Csp6I GTAC 3 cut(s) 415, 560, 703
CspCI CAANNNNNGTGG 2 cut(s) 76, 111
CviAII CATG 4 cut(s) 159, 310, 392, 551
CviQI GTAC 3 cut(s) 415, 560, 703
DdeI CTNAG 5 cut(s) 584, 639, 648, 792, 863
DpnI GATC 6 cut(s) 321, 387, 831, 909, 964, 1056
DpnII GATC 6 cut(s) 319, 385, 829, 907, 962, 1054
DraIII CACNNNGTG 1 cut(s) 11
EaeI YGGCCR 1 cut(s) 394
Eco130I CCWWGG 2 cut(s) 158, 309
Eco32I GATATC 1 cut(s) 1044
Eco47I GGWCC 1 cut(s) 306
Eco88I CYCGRG 1 cut(s) 1012
EcoRII CCWGG 2 cut(s) 284, 987
EcoRV GATATC 1 cut(s) 1044
EcoT14I CCWWGG 2 cut(s) 158, 309
EcoT22I ATGCAT 1 cut(s) 898
ErhI CCWWGG 2 cut(s) 158, 309
FaeI CATG 4 cut(s) 162, 313, 395, 554
FaqI GGGAC 1 cut(s) 319
FatI CATG 4 cut(s) 158, 309, 391, 550
FauI CCCGC 1 cut(s) 331
FbaI TGATCA 2 cut(s) 385, 829
Fnu4HI GCNGC 3 cut(s) 397, 674, 942
FokI GGATG 4 cut(s) 33, 914, 954, 964
Fsp4HI GCNGC 3 cut(s) 397, 674, 942
FspBI CTAG 4 cut(s) 557, 771, 875, 1123
GluI GCNGC 3 cut(s) 397, 674, 942
HaeIII GGCC 2 cut(s) 396, 758
HgaI GACGC 1 cut(s) 529
Hin1I GRCGYC 1 cut(s) 540
Hin1II CATG 4 cut(s) 162, 313, 395, 554
HinfI GANTC 5 cut(s) 36, 580, 715, 992, 1010
HphI GGTGA 8 cut(s) 214, 215, 305, 329, 416, 448, 482, 1079
Hpy166II GTNNAC 2 cut(s) 185, 1070
Hpy188I TCNGA 5 cut(s) 385, 529, 640, 649, 1051
Hpy188III TCNNGA 2 cut(s) 875, 1112
Hpy8I GTNNAC 2 cut(s) 185, 1070
Hpy99I CGWCG 1 cut(s) 545
HpyAV CCTTC 3 cut(s) 431, 438, 898
HpyCH4III ACNGT 1 cut(s) 1119
HpyCH4IV ACGT 2 cut(s) 120, 483
HpyCH4V TGCA 5 cut(s) 409, 764, 896, 941, 998
HpyF10VI GCNNNNNNNGC 1 cut(s) 679
HpyF3I CTNAG 5 cut(s) 584, 639, 648, 792, 863
HpySE526I ACGT 2 cut(s) 120, 483
Hsp92I GRCGYC 1 cut(s) 540
Hsp92II CATG 4 cut(s) 162, 313, 395, 554
Ksp22I TGATCA 2 cut(s) 385, 829
Kzo9I GATC 6 cut(s) 319, 385, 829, 907, 962, 1054
LmnI GCTCC 1 cut(s) 679
Lsp1109I GCAGC 2 cut(s) 685, 953
LweI GCATC 3 cut(s) 773, 883, 976
MaeI CTAG 4 cut(s) 557, 771, 875, 1123
MaeII ACGT 2 cut(s) 120, 483
MaeIII GTNAC 2 cut(s) 238, 821
MalI GATC 6 cut(s) 321, 387, 831, 909, 964, 1056
MboI GATC 6 cut(s) 319, 385, 829, 907, 962, 1054
MboII GAAGA 5 cut(s) 71, 211, 218, 1019, 1064
MfeI CAATTG 1 cut(s) 30
MflI RGATCY 1 cut(s) 907
MhlI GDGCHC 1 cut(s) 489
MlyI GAGTC 2 cut(s) 1001, 1004
MmeI TCCRAC 1 cut(s) 955
Mph1103I ATGCAT 1 cut(s) 898
MroXI GAANNNNTTC 2 cut(s) 176, 1086
MseI TTAA 5 cut(s) 84, 135, 654, 852, 1026
MspA1I CMGCKG 1 cut(s) 399
MspR9I CCNGG 2 cut(s) 286, 989
MunI CAATTG 1 cut(s) 30
Mva1269I GAATGC 1 cut(s) 703
MvaI CCWGG 2 cut(s) 286, 989
MvnI CGCG 1 cut(s) 326
MwoI GCNNNNNNNGC 1 cut(s) 679
NcoI CCATGG 2 cut(s) 158, 309
NdeII GATC 6 cut(s) 319, 385, 829, 907, 962, 1054
NlaIII CATG 4 cut(s) 162, 313, 395, 554
NlaIV GGNNCC 5 cut(s) 6, 253, 283, 307, 362
NmuCI GTSAC 2 cut(s) 238, 821
NsiI ATGCAT 1 cut(s) 898
NspV TTCGAA 1 cut(s) 499
PctI GAATGC 1 cut(s) 703
PdmI GAANNNNTTC 2 cut(s) 176, 1086
PfeI GAWTC 3 cut(s) 36, 580, 715
PflMI CCANNNNNTGG 1 cut(s) 803
PfoI TCCNGGA 1 cut(s) 987
PkrI GCNGC 3 cut(s) 398, 675, 943
PleI GAGTC 2 cut(s) 1000, 1004
PpsI GAGTC 2 cut(s) 1000, 1004
Ppu21I YACGTR 1 cut(s) 484
PshAI GACNNNNGTC 1 cut(s) 311
PshBI ATTAAT 1 cut(s) 1026
PsiI TTATAA 1 cut(s) 666
Psp1406I AACGTT 1 cut(s) 120
Psp6I CCWGG 2 cut(s) 284, 987
PspGI CCWGG 2 cut(s) 284, 987
PspN4I GGNNCC 5 cut(s) 6, 253, 283, 307, 362
PspPI GGNCC 1 cut(s) 306
PstI CTGCAG 1 cut(s) 1000
PsuI RGATCY 1 cut(s) 907
RsaI GTAC 3 cut(s) 416, 561, 704
RsaNI GTAC 3 cut(s) 415, 560, 703
SaqAI TTAA 5 cut(s) 84, 135, 654, 852, 1026
SatI GCNGC 3 cut(s) 397, 674, 942
Sau3AI GATC 6 cut(s) 319, 385, 829, 907, 962, 1054
Sau96I GGNCC 1 cut(s) 306
ScaI AGTACT 1 cut(s) 561
SchI GAGTC 2 cut(s) 1001, 1004
ScrFI CCNGG 2 cut(s) 286, 989
SduI GDGCHC 1 cut(s) 489
SfaNI GCATC 3 cut(s) 773, 883, 976
SfcI CTRYAG 1 cut(s) 996
SfuI TTCGAA 1 cut(s) 499
SinI GGWCC 1 cut(s) 306
SpeI ACTAGT 1 cut(s) 770
SsiI CCGC 2 cut(s) 324, 397
SspI AATATT 1 cut(s) 1021
SspMI CTAG 4 cut(s) 557, 771, 875, 1123
StyD4I CCNGG 2 cut(s) 284, 987
StyI CCWWGG 2 cut(s) 158, 309
TaaI ACNGT 1 cut(s) 1119
TaiI ACGT 2 cut(s) 123, 486
TaqI TCGA 2 cut(s) 265, 499
TatI WGTACW 2 cut(s) 414, 559
TauI GCSGC 1 cut(s) 399
TfiI GAWTC 3 cut(s) 36, 580, 715
Tru1I TTAA 5 cut(s) 84, 135, 654, 852, 1026
Tru9I TTAA 5 cut(s) 84, 135, 654, 852, 1026
TscAI CASTG 2 cut(s) 697, 832
TseFI GTSAC 2 cut(s) 238, 821
TseI GCWGC 2 cut(s) 673, 941
Tsp45I GTSAC 2 cut(s) 238, 821
TspDTI ATGAA 6 cut(s) 35, 420, 621, 728, 917, 1020
TspGWI ACGGA 1 cut(s) 353
TspRI CASTG 2 cut(s) 697, 832
Van91I CCANNNNNTGG 1 cut(s) 803
VpaK11BI GGWCC 1 cut(s) 306
VspI ATTAAT 1 cut(s) 1026
XapI RAATTY 5 cut(s) 131, 451, 495, 622, 916
XbaI TCTAGA 1 cut(s) 874
XcmI CCANNNNNNNNNTGG 1 cut(s) 165
XmnI GAANNNNTTC 2 cut(s) 176, 1086
XspI CTAG 4 cut(s) 557, 771, 875, 1123
ZrmI AGTACT 1 cut(s) 561
Zsp2I ATGCAT 1 cut(s) 898
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.