Rroxscaffold_4G00305330
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000076
Physical Location & Seq
Forward (+)
25955948 .. 25956892
945 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00305330.1

Sequence Viewer

Length: 945 bp
ATGGACAACGGTGGCCTTGACGATCATCTGCTACCGGGACAAAGATTTGTCCCAATGGAAGACGAACTGCTTCTCTGCTACTTGAAGCCCATGGTGCATGGAAAGCAAGTACCCGGCAGAGACCTCGTGGTGTTTGACTGTGACCTATACGGTGACCAAGAACCTTGGGAGATATGGGAAACATATAAATTCAGAAGAGCAAACGACTTGAGGAAAAACAAAGACCTCTACTTCTTCGCTCAGCAGAAGAAGAAGACTCCAAAAGACTCGCGGGTAGGCCGAACAGTCGGAAGGGGTGGCACTTGGAAAGAAGAGTCCGGCAAGAAAGTAATTTCTCCGGAGACTAATCGAGTGATTGGCTACAAGAAAACATTTGGTTATAAAAACCAAGGATCCCCGCATGAAGGCTGTTGGATCATGCATGAGTTTGAACTTGATTCATCCCAACTCATACACAGGAAACAAGAAACAAACTATGTTCTTTGTGTACTTCGAAAGAAAAAGGAACCCGAAATAAACAAAAGAAAACGGCAAGAACAGATACCCGGATACAATTCTGTCCTGGATGATGGAACTAACCTGATTAGCAAGCAACCGAAGCAAGAATGTCTTGTACTATCCACTTCCAATGCATTACCACCGCCATTAGGGTTAGGCGCAGAACAAGGTGAACAGGAACAGTGCTTGCAACCTCCATGCATTAATAACCCTAATGCACAAACAGTTCCATTGCCGCCGTGTACCTTTCCTGGTGAAGAAAATCAGGAAGTGCAACACTTTGCATCTGGAGAGCAATATTGGGGGCAGCAATTTATCGTTCCATCTGGAGATAATCAAAAGAGGAATTTCTCTGAGAGGGAAGAAAAACTGTGGCAGCAGATGGTAGCTGACCTCGGCACCACACCTCACCCTCACACATCATCAATGAGGTCGACGTATATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

314

Amino Acids

36.06

Weight (kDa)

6.72

Isoelectric Point (pI)

53.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 12 - 145 1.6e-25 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 381
AccB1I GGYRCC 1 cut(s) 896
AccI GTMKAC 1 cut(s) 932
AccII CGCG 1 cut(s) 271
AccIII TCCGGA 1 cut(s) 337
AciI CCGC 4 cut(s) 271, 398, 641, 734
AclWI GGATC 3 cut(s) 387, 400, 422
AcsI RAATTY 2 cut(s) 188, 844
AfaI GTAC 4 cut(s) 111, 489, 615, 742
AfiI CCNNNNNNNGG 2 cut(s) 404, 647
AgsI TTSAA 2 cut(s) 85, 431
AjnI CCWGG 2 cut(s) 561, 748
AluBI AGCT 1 cut(s) 887
AluI AGCT 1 cut(s) 887
Alw26I GTCTC 2 cut(s) 114, 335
AlwI GGATC 3 cut(s) 387, 400, 422
Aor13HI TCCGGA 1 cut(s) 337
AoxI GGCC 2 cut(s) 13, 277
ApeKI GCWGC 2 cut(s) 805, 874
ApoI RAATTY 2 cut(s) 188, 844
AseI ATTAAT 1 cut(s) 702
Asp700I GAANNNNTTC 1 cut(s) 69
AspLEI GCGC 1 cut(s) 659
AsuC2I CCSGG 3 cut(s) 36, 114, 546
AsuHPI GGTGA 4 cut(s) 164, 680, 764, 899
AsuII TTCGAA 1 cut(s) 493
BamHI GGATCC 1 cut(s) 392
BanI GGYRCC 1 cut(s) 896
BauI CACGAG 1 cut(s) 125
BbsI GAAGAC 2 cut(s) 66, 260
BbvI GCAGC 2 cut(s) 817, 886
BccI CCATC 3 cut(s) 563, 829, 874
BceAI ACGGC 2 cut(s) 545, 721
BcgI CGANNNNNNTGC 2 cut(s) 106, 140
BciT130I CCWGG 2 cut(s) 563, 750
BciVI GTATCC 1 cut(s) 542
BcnI CCSGG 3 cut(s) 36, 114, 546
BcoDI GTCTC 2 cut(s) 114, 335
BfuI GTATCC 1 cut(s) 542
BisI GCNGC 3 cut(s) 734, 806, 875
BlpI GCTNAGC 1 cut(s) 240
BlsI GCNGC 3 cut(s) 735, 807, 876
Bme1390I CCNGG 5 cut(s) 36, 114, 546, 563, 750
BmiI GGNNCC 3 cut(s) 394, 507, 898
BmrFI CCNGG 5 cut(s) 36, 114, 546, 563, 750
BmsI GCATC 1 cut(s) 791
BpiI GAAGAC 2 cut(s) 66, 260
BpmI CTGGAG 2 cut(s) 807, 846
Bpu1102I GCTNAGC 1 cut(s) 240
Bpu14I TTCGAA 1 cut(s) 493
BpuEI CTTGAG 1 cut(s) 229
BpuMI CCSGG 3 cut(s) 36, 114, 546
BsaI GGTCTC 1 cut(s) 114
BsaJI CCNNGG 4 cut(s) 90, 164, 388, 892
BsaWI WCCGGW 1 cut(s) 337
Bsc4I CCNNNNNNNGG 2 cut(s) 404, 647
Bse3DI GCAATG 1 cut(s) 728
BseAI TCCGGA 1 cut(s) 337
BseBI CCWGG 2 cut(s) 563, 750
BseDI CCNNGG 4 cut(s) 90, 164, 388, 892
BseGI GGATG 2 cut(s) 440, 571
BseLI CCNNNNNNNGG 2 cut(s) 404, 647
BseMI GCAATG 1 cut(s) 728
BseMII CTCAG 2 cut(s) 254, 843
BseXI GCAGC 2 cut(s) 817, 886
Bsh1236I CGCG 1 cut(s) 271
BshFI GGCC 2 cut(s) 15, 279
BshNI GGYRCC 1 cut(s) 896
BsiSI CCGG 5 cut(s) 35, 114, 318, 338, 546
BslFI GGGAC 2 cut(s) 35, 51
BslI CCNNNNNNNGG 2 cut(s) 404, 647
BsmAI GTCTC 2 cut(s) 114, 335
BsmFI GGGAC 2 cut(s) 35, 51
BsnI GGCC 2 cut(s) 15, 279
Bso31I GGTCTC 1 cut(s) 114
Bsp119I TTCGAA 1 cut(s) 493
Bsp13I TCCGGA 1 cut(s) 337
Bsp143I GATC 3 cut(s) 22, 392, 414
Bsp1720I GCTNAGC 1 cut(s) 240
Bsp19I CCATGG 1 cut(s) 90
BspACI CCGC 4 cut(s) 271, 398, 641, 734
BspANI GGCC 2 cut(s) 15, 279
BspCNI CTCAG 2 cut(s) 253, 844
BspEI TCCGGA 1 cut(s) 337
BspFNI CGCG 1 cut(s) 271
BspLI GGNNCC 3 cut(s) 394, 507, 898
BspPI GGATC 3 cut(s) 387, 400, 422
BspQI GCTCTTC 1 cut(s) 190
BspT104I TTCGAA 1 cut(s) 493
BspT107I GGYRCC 1 cut(s) 896
BspTNI GGTCTC 1 cut(s) 114
BsrDI GCAATG 1 cut(s) 728
BssECI CCNNGG 4 cut(s) 90, 164, 388, 892
BssMI GATC 3 cut(s) 22, 392, 414
BssSI CACGAG 1 cut(s) 125
BssT1I CCWWGG 3 cut(s) 90, 164, 388
Bst2BI CACGAG 1 cut(s) 125
Bst2UI CCWGG 2 cut(s) 563, 750
Bst4CI ACNGT 7 cut(s) 11, 140, 152, 286, 681, 724, 870
Bst6I CTCTTC 2 cut(s) 190, 306
BstBI TTCGAA 1 cut(s) 493
BstC8I GCNNGC 2 cut(s) 590, 686
BstDEI CTNAG 2 cut(s) 240, 852
BstDSI CCRYGG 1 cut(s) 90
BstEII GGTNACC 1 cut(s) 152
BstF5I GGATG 2 cut(s) 440, 571
BstFNI CGCG 1 cut(s) 271
BstHHI GCGC 1 cut(s) 659
BstKTI GATC 3 cut(s) 25, 395, 417
BstMAI GTCTC 2 cut(s) 114, 335
BstMBI GATC 3 cut(s) 22, 392, 414
BstMWI GCNNNNNNNGC 3 cut(s) 94, 103, 598
BstNI CCWGG 2 cut(s) 563, 750
BstPI GGTNACC 1 cut(s) 152
BstSCI CCNGG 5 cut(s) 34, 112, 544, 561, 748
BstUI CGCG 1 cut(s) 271
BstV1I GCAGC 2 cut(s) 817, 886
BstV2I GAAGAC 2 cut(s) 66, 260
BstX2I RGATCY 1 cut(s) 392
BstYI RGATCY 1 cut(s) 392
BsuI GTATCC 1 cut(s) 542
BsuRI GGCC 2 cut(s) 15, 279
BtgI CCRYGG 1 cut(s) 90
BtsCI GGATG 2 cut(s) 440, 571
BtsIMutI CAGTG 1 cut(s) 686
Cac8I GCNNGC 2 cut(s) 590, 686
CfoI GCGC 1 cut(s) 659
Csp6I GTAC 4 cut(s) 110, 488, 614, 741
CviAII CATG 6 cut(s) 91, 98, 401, 418, 422, 696
CviJI RGCY 6 cut(s) 15, 88, 279, 360, 408, 887
CviKI_1 RGCY 6 cut(s) 15, 88, 279, 360, 408, 887
CviQI GTAC 4 cut(s) 110, 488, 614, 741
DdeI CTNAG 2 cut(s) 240, 852
DpnI GATC 3 cut(s) 24, 394, 416
DpnII GATC 3 cut(s) 22, 392, 414
Eam1104I CTCTTC 2 cut(s) 190, 306
EarI CTCTTC 2 cut(s) 190, 306
Eco130I CCWWGG 3 cut(s) 90, 164, 388
Eco31I GGTCTC 1 cut(s) 114
Eco91I GGTNACC 1 cut(s) 152
EcoO65I GGTNACC 1 cut(s) 152
EcoRII CCWGG 2 cut(s) 561, 748
EcoT14I CCWWGG 3 cut(s) 90, 164, 388
EcoT22I ATGCAT 3 cut(s) 423, 634, 701
ErhI CCWWGG 3 cut(s) 90, 164, 388
FaeI CATG 6 cut(s) 94, 101, 404, 421, 425, 699
FalI AAGNNNNNCTT 2 cut(s) 594, 626
FaqI GGGAC 2 cut(s) 35, 51
FatI CATG 6 cut(s) 90, 97, 400, 417, 421, 695
FauI CCCGC 2 cut(s) 264, 405
FblI GTMKAC 1 cut(s) 932
Fnu4HI GCNGC 3 cut(s) 734, 806, 875
FokI GGATG 2 cut(s) 427, 578
Fsp4HI GCNGC 3 cut(s) 734, 806, 875
GlaI GCGC 1 cut(s) 658
GluI GCNGC 3 cut(s) 734, 806, 875
GsuI CTGGAG 2 cut(s) 807, 846
HaeIII GGCC 2 cut(s) 15, 279
HapII CCGG 5 cut(s) 35, 114, 318, 338, 546
HhaI GCGC 1 cut(s) 659
Hin1II CATG 6 cut(s) 94, 101, 404, 421, 425, 699
Hin6I GCGC 1 cut(s) 657
HinP1I GCGC 1 cut(s) 657
HincII GTYRAC 1 cut(s) 933
HindII GTYRAC 1 cut(s) 933
HinfI GANTC 4 cut(s) 256, 266, 314, 437
HpaII CCGG 5 cut(s) 35, 114, 318, 338, 546
HphI GGTGA 4 cut(s) 164, 680, 764, 899
Hpy166II GTNNAC 4 cut(s) 488, 671, 741, 933
Hpy188I TCNGA 3 cut(s) 194, 290, 853
Hpy188III TCNNGA 4 cut(s) 338, 764, 786, 825
Hpy8I GTNNAC 4 cut(s) 488, 671, 741, 933
Hpy99I CGWCG 1 cut(s) 937
HpyAV CCTTC 2 cut(s) 285, 398
HpyCH4III ACNGT 7 cut(s) 11, 140, 152, 286, 681, 724, 870
HpyCH4IV ACGT 1 cut(s) 935
HpyCH4V TGCA 8 cut(s) 97, 421, 632, 688, 699, 716, 772, 782
HpyF10VI GCNNNNNNNGC 3 cut(s) 94, 103, 598
HpyF3I CTNAG 2 cut(s) 240, 852
HpySE526I ACGT 1 cut(s) 935
Hsp92II CATG 6 cut(s) 94, 101, 404, 421, 425, 699
HspAI GCGC 1 cut(s) 657
Kpn2I TCCGGA 1 cut(s) 337
Kzo9I GATC 3 cut(s) 22, 392, 414
LguI GCTCTTC 1 cut(s) 190
Lsp1109I GCAGC 2 cut(s) 817, 886
LweI GCATC 1 cut(s) 791
MaeII ACGT 1 cut(s) 935
MaeIII GTNAC 2 cut(s) 140, 152
MalI GATC 3 cut(s) 24, 394, 416
MboI GATC 3 cut(s) 22, 392, 414
MboII GAAGA 9 cut(s) 71, 207, 226, 259, 262, 265, 323, 767, 872
MflI RGATCY 1 cut(s) 392
MluCI AATT 5 cut(s) 188, 330, 553, 809, 844
MlyI GAGTC 3 cut(s) 250, 260, 323
MmeI TCCRAC 2 cut(s) 268, 392
Mph1103I ATGCAT 3 cut(s) 423, 634, 701
MroI TCCGGA 1 cut(s) 337
MroXI GAANNNNTTC 1 cut(s) 69
MseI TTAA 1 cut(s) 702
MspI CCGG 5 cut(s) 35, 114, 318, 338, 546
MspR9I CCNGG 5 cut(s) 36, 114, 546, 563, 750
MvaI CCWGG 2 cut(s) 563, 750
MvnI CGCG 1 cut(s) 271
MwoI GCNNNNNNNGC 3 cut(s) 94, 103, 598
NciI CCSGG 3 cut(s) 36, 114, 546
NcoI CCATGG 1 cut(s) 90
NdeII GATC 3 cut(s) 22, 392, 414
NlaIII CATG 6 cut(s) 94, 101, 404, 421, 425, 699
NlaIV GGNNCC 3 cut(s) 394, 507, 898
NmeAIII GCCGAG 1 cut(s) 873
NmuCI GTSAC 2 cut(s) 140, 152
NsiI ATGCAT 3 cut(s) 423, 634, 701
NspV TTCGAA 1 cut(s) 493
PciSI GCTCTTC 1 cut(s) 190
PdmI GAANNNNTTC 1 cut(s) 69
PfeI GAWTC 1 cut(s) 437
PfoI TCCNGGA 1 cut(s) 561
PkrI GCNGC 3 cut(s) 735, 807, 876
PleI GAGTC 3 cut(s) 250, 260, 322
PpsI GAGTC 3 cut(s) 250, 260, 322
PshBI ATTAAT 1 cut(s) 702
PsiI TTATAA 1 cut(s) 381
Psp6I CCWGG 2 cut(s) 561, 748
PspEI GGTNACC 1 cut(s) 152
PspGI CCWGG 2 cut(s) 561, 748
PspN4I GGNNCC 3 cut(s) 394, 507, 898
PsuI RGATCY 1 cut(s) 392
RsaI GTAC 4 cut(s) 111, 489, 615, 742
RsaNI GTAC 4 cut(s) 110, 488, 614, 741
SalI GTCGAC 1 cut(s) 931
SapI GCTCTTC 1 cut(s) 190
SaqAI TTAA 1 cut(s) 702
SatI GCNGC 3 cut(s) 734, 806, 875
Sau3AI GATC 3 cut(s) 22, 392, 414
SchI GAGTC 3 cut(s) 250, 260, 323
ScrFI CCNGG 5 cut(s) 36, 114, 546, 563, 750
SfaNI GCATC 1 cut(s) 791
SfuI TTCGAA 1 cut(s) 493
SmlI CTYRAG 1 cut(s) 208
SmoI CTYRAG 1 cut(s) 208
Sse9I AATT 5 cut(s) 188, 330, 553, 809, 844
SsiI CCGC 4 cut(s) 271, 398, 641, 734
SspI AATATT 1 cut(s) 797
StyD4I CCNGG 5 cut(s) 34, 112, 544, 561, 748
StyI CCWWGG 3 cut(s) 90, 164, 388
TaaI ACNGT 7 cut(s) 11, 140, 152, 286, 681, 724, 870
TaiI ACGT 1 cut(s) 938
TaqI TCGA 3 cut(s) 349, 493, 932
TasI AATT 5 cut(s) 188, 330, 553, 809, 844
TatI WGTACW 2 cut(s) 487, 613
TauI GCSGC 1 cut(s) 736
TfiI GAWTC 1 cut(s) 437
Tru1I TTAA 1 cut(s) 702
Tru9I TTAA 1 cut(s) 702
TscAI CASTG 1 cut(s) 686
TseFI GTSAC 2 cut(s) 140, 152
TseI GCWGC 2 cut(s) 805, 874
Tsp45I GTSAC 2 cut(s) 140, 152
TspDTI ATGAA 2 cut(s) 417, 429
TspRI CASTG 1 cut(s) 686
VspI ATTAAT 1 cut(s) 702
XapI RAATTY 2 cut(s) 188, 844
XmiI GTMKAC 1 cut(s) 932
XmnI GAANNNNTTC 1 cut(s) 69
Zsp2I ATGCAT 3 cut(s) 423, 634, 701
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.