Rorug07G0291800
NAC Family

NAC domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
28542047 .. 28549950
7904 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0291800.1

Sequence Viewer

Length: 942 bp
ATGCTTGATTGGGACTATTGGCTGGTGAAATGGCGAGTGGAGTTTTGGGGGAGGGAATGGAACGTCATGGACATAGGCAGTGTCACCAGCCTCGTCTTCTTGCACTTGCTTTCTCTTTTTGCGCCGTTTTACTTCACCTGGACTGCGTTTTGGCTGGCCATTGCGCTCTACTTTGTCTCAGGTGTCGGTGTAACCCTTTCATTCCATAGGAATCTCTCCCACAGAAGCTTTAAGCTTCCCAGATGGCTCGAGTACTTCTTTGCCTATTGTGGGGTTCTATCATTTCAGAGAAGTCCACTTGATTGGGTGAGCGTACACAGATCCCACCATCAGTTTACAGACACTATGAAAGACCCTCATAGCCCAGTCAGAGGATTCTGGTTTAGTCATGTTGGTTCGGCAATCGATTACCGTGGTCGAAACGGAAGTTATGAACCACGACTAAAGAATGTTGGAGATTTGAAAGGACAACCGTACTATATGTTTCTCCATTATACATACCCTCTTCATTATATAGCTCTCGGAGTTCTATTACATTTTCTGGGAGGAATGCCCTTTTTGGTTTGGGGAATGGGAGTGAGGACGGTACTTTTTCTCCATGCTACATTTGGAATAAATTCAATCTGCCATACATGGGGACAACAAATATGGGAAACTGGTGATTTATCTAGAAACAATTGGTTGATTGGATTTCTGGCACTTGGAGAAGGTTGGCATAATAATCACCATGCTTTTCAGCACTCAGCTCGACACGGCTTGGAATGGTGGCAAATTGATGTTACTTGGTATGTCATAAGATTTCTTGAACTTGTGGGTTTGGCAACAGAAGTGAAGCTTCCAACTGAGACTCAGAAGAAACAAAGAGCTTTAAGCAATAACAAGATGATCCACGAGGAAAAGCAGCAGCAGCTTGAAGCAAAAGTCCAAAATGGCAACCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

313

Amino Acids

36.88

Weight (kDa)

8.97

Isoelectric Point (pI)

32.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_desaturase PF00487 46 - 259 9.7e-17 Fatty acid desaturase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 315, 880
AcoI YGGCCR 1 cut(s) 156
AcsI RAATTY 1 cut(s) 616
AfaI GTAC 4 cut(s) 254, 315, 476, 588
AfiI CCNNNNNNNGG 3 cut(s) 270, 371, 634
AgsI TTSAA 4 cut(s) 463, 621, 806, 914
AjnI CCWGG 1 cut(s) 137
AluBI AGCT 7 cut(s) 228, 235, 518, 746, 835, 866, 910
AluI AGCT 7 cut(s) 228, 235, 518, 746, 835, 866, 910
Alw26I GTCTC 2 cut(s) 181, 839
AlwI GGATC 2 cut(s) 315, 880
Ama87I CYCGRG 1 cut(s) 248
AoxI GGCC 1 cut(s) 156
ApeKI GCWGC 3 cut(s) 901, 904, 907
ApoI RAATTY 1 cut(s) 616
Asp700I GAANNNNTTC 1 cut(s) 616
AspLEI GCGC 2 cut(s) 124, 166
AsuHPI GGTGA 6 cut(s) 37, 76, 127, 319, 671, 716
AvaI CYCGRG 1 cut(s) 248
BalI TGGCCA 1 cut(s) 158
BauI CACGAG 1 cut(s) 890
BbsI GAAGAC 1 cut(s) 88
BbvI GCAGC 3 cut(s) 913, 916, 919
BccI CCATC 2 cut(s) 237, 336
BceAI ACGGC 2 cut(s) 109, 769
BcgI CGANNNNNNTGC 2 cut(s) 728, 762
BciT130I CCWGG 1 cut(s) 139
BcoDI GTCTC 2 cut(s) 181, 839
BfaI CTAG 1 cut(s) 669
BisI GCNGC 3 cut(s) 902, 905, 908
BlsI GCNGC 3 cut(s) 903, 906, 909
BmcAI AGTACT 1 cut(s) 254
Bme1390I CCNGG 1 cut(s) 139
BmeT110I CYCGRG 1 cut(s) 248
BmrFI CCNGG 1 cut(s) 139
BmrI ACTGGG 1 cut(s) 359
BmuI ACTGGG 1 cut(s) 359
BpiI GAAGAC 1 cut(s) 88
Bsa29I ATCGAT 1 cut(s) 405
BsaJI CCNNGG 1 cut(s) 412
BsaXI ACNNNNNCTCC 2 cut(s) 579, 609
Bsc4I CCNNNNNNNGG 3 cut(s) 270, 371, 634
Bse1I ACTGG 2 cut(s) 365, 661
Bse3DI GCAATG 1 cut(s) 159
BseBI CCWGG 1 cut(s) 139
BseCI ATCGAT 1 cut(s) 405
BseDI CCNNGG 1 cut(s) 412
BseLI CCNNNNNNNGG 3 cut(s) 270, 371, 634
BseMI GCAATG 1 cut(s) 159
BseMII CTCAG 4 cut(s) 192, 756, 834, 863
BseNI ACTGG 2 cut(s) 365, 661
BseXI GCAGC 3 cut(s) 913, 916, 919
BshFI GGCC 1 cut(s) 158
BshVI ATCGAT 1 cut(s) 405
BsiHKCI CYCGRG 1 cut(s) 248
BslFI GGGAC 2 cut(s) 26, 651
BslI CCNNNNNNNGG 3 cut(s) 270, 371, 634
BsmAI GTCTC 2 cut(s) 181, 839
BsmFI GGGAC 2 cut(s) 26, 651
BsmI GAATGC 1 cut(s) 555
BsnI GGCC 1 cut(s) 158
BsoBI CYCGRG 1 cut(s) 248
Bsp143I GATC 2 cut(s) 320, 885
BspANI GGCC 1 cut(s) 158
BspCNI CTCAG 4 cut(s) 191, 755, 835, 862
BspDI ATCGAT 1 cut(s) 405
BspPI GGATC 2 cut(s) 315, 880
BsrDI GCAATG 1 cut(s) 159
BsrI ACTGG 2 cut(s) 365, 661
BssECI CCNNGG 1 cut(s) 412
BssMI GATC 2 cut(s) 320, 885
BssSI CACGAG 1 cut(s) 890
Bst2BI CACGAG 1 cut(s) 890
Bst2UI CCWGG 1 cut(s) 139
Bst4CI ACNGT 3 cut(s) 413, 474, 586
Bst6I CTCTTC 1 cut(s) 510
BstC8I GCNNGC 1 cut(s) 156
BstDEI CTNAG 4 cut(s) 178, 742, 843, 849
BstDSI CCRYGG 1 cut(s) 412
BstHHI GCGC 2 cut(s) 124, 166
BstKTI GATC 2 cut(s) 323, 888
BstMAI GTCTC 2 cut(s) 181, 839
BstMBI GATC 2 cut(s) 320, 885
BstMWI GCNNNNNNNGC 1 cut(s) 907
BstNI CCWGG 1 cut(s) 139
BstSCI CCNGG 1 cut(s) 137
BstV1I GCAGC 3 cut(s) 913, 916, 919
BstV2I GAAGAC 1 cut(s) 88
BstX2I RGATCY 1 cut(s) 320
BstXI CCANNNNNNTGG 1 cut(s) 303
BstYI RGATCY 1 cut(s) 320
Bsu15I ATCGAT 1 cut(s) 405
BsuRI GGCC 1 cut(s) 158
BsuTUI ATCGAT 1 cut(s) 405
BtgI CCRYGG 1 cut(s) 412
BtsI GCAGTG 1 cut(s) 85
BtsIMutI CAGTG 1 cut(s) 85
Cac8I GCNNGC 1 cut(s) 156
CfoI GCGC 2 cut(s) 124, 166
ClaI ATCGAT 1 cut(s) 405
Csp6I GTAC 4 cut(s) 253, 314, 475, 587
CviAII CATG 5 cut(s) 67, 389, 599, 633, 728
CviQI GTAC 4 cut(s) 253, 314, 475, 587
DdeI CTNAG 4 cut(s) 178, 742, 843, 849
DpnI GATC 2 cut(s) 322, 887
DpnII GATC 2 cut(s) 320, 885
EaeI YGGCCR 1 cut(s) 156
Eam1104I CTCTTC 1 cut(s) 510
EarI CTCTTC 1 cut(s) 510
Eco88I CYCGRG 1 cut(s) 248
EcoRII CCWGG 1 cut(s) 137
FaeI CATG 5 cut(s) 70, 392, 602, 636, 731
FalI AAGNNNNNCTT 2 cut(s) 819, 851
FaqI GGGAC 2 cut(s) 26, 651
FatI CATG 5 cut(s) 66, 388, 598, 632, 727
Fnu4HI GCNGC 3 cut(s) 902, 905, 908
Fsp4HI GCNGC 3 cut(s) 902, 905, 908
FspBI CTAG 1 cut(s) 669
GlaI GCGC 2 cut(s) 123, 165
GluI GCNGC 3 cut(s) 902, 905, 908
HaeIII GGCC 1 cut(s) 158
HhaI GCGC 2 cut(s) 124, 166
Hin1II CATG 5 cut(s) 70, 392, 602, 636, 731
Hin6I GCGC 2 cut(s) 122, 164
HinP1I GCGC 2 cut(s) 122, 164
HindIII AAGCTT 3 cut(s) 226, 233, 833
HinfI GANTC 3 cut(s) 211, 375, 847
HphI GGTGA 6 cut(s) 37, 76, 127, 319, 671, 716
Hpy166II GTNNAC 3 cut(s) 296, 316, 336
Hpy188I TCNGA 4 cut(s) 288, 371, 524, 852
Hpy188III TCNNGA 2 cut(s) 669, 803
Hpy8I GTNNAC 3 cut(s) 296, 316, 336
HpyAV CCTTC 1 cut(s) 701
HpyCH4III ACNGT 3 cut(s) 413, 474, 586
HpyCH4IV ACGT 1 cut(s) 63
HpyCH4V TGCA 1 cut(s) 103
HpyF10VI GCNNNNNNNGC 1 cut(s) 907
HpyF3I CTNAG 4 cut(s) 178, 742, 843, 849
HpySE526I ACGT 1 cut(s) 63
Hsp92II CATG 5 cut(s) 70, 392, 602, 636, 731
HspAI GCGC 2 cut(s) 122, 164
Kzo9I GATC 2 cut(s) 320, 885
Lsp1109I GCAGC 3 cut(s) 913, 916, 919
MaeI CTAG 1 cut(s) 669
MaeII ACGT 1 cut(s) 63
MaeIII GTNAC 3 cut(s) 82, 190, 778
MalI GATC 2 cut(s) 322, 887
MboI GATC 2 cut(s) 320, 885
MboII GAAGA 3 cut(s) 88, 497, 865
MfeI CAATTG 1 cut(s) 676
MflI RGATCY 1 cut(s) 320
MlsI TGGCCA 1 cut(s) 158
MluCI AATT 3 cut(s) 616, 676, 771
MluNI TGGCCA 1 cut(s) 158
MlyI GAGTC 1 cut(s) 841
MmeI TCCRAC 2 cut(s) 433, 863
MnlI CCTC 8 cut(s) 45, 101, 365, 366, 513, 539, 573, 886
Mox20I TGGCCA 1 cut(s) 158
MroXI GAANNNNTTC 1 cut(s) 616
MscI TGGCCA 1 cut(s) 158
MseI TTAA 2 cut(s) 231, 869
Msp20I TGGCCA 1 cut(s) 158
MspR9I CCNGG 1 cut(s) 139
MunI CAATTG 1 cut(s) 676
Mva1269I GAATGC 1 cut(s) 555
MvaI CCWGG 1 cut(s) 139
MwoI GCNNNNNNNGC 1 cut(s) 907
NdeII GATC 2 cut(s) 320, 885
NlaIII CATG 5 cut(s) 70, 392, 602, 636, 731
NmuCI GTSAC 1 cut(s) 82
PaeR7I CTCGAG 1 cut(s) 248
PctI GAATGC 1 cut(s) 555
PdmI GAANNNNTTC 1 cut(s) 616
PfeI GAWTC 2 cut(s) 211, 375
PkrI GCNGC 3 cut(s) 903, 906, 909
PleI GAGTC 1 cut(s) 841
PpsI GAGTC 1 cut(s) 841
Psp6I CCWGG 1 cut(s) 137
PspGI CCWGG 1 cut(s) 137
PspXI VCTCGAGB 1 cut(s) 248
PsuI RGATCY 1 cut(s) 320
RsaI GTAC 4 cut(s) 254, 315, 476, 588
RsaNI GTAC 4 cut(s) 253, 314, 475, 587
SaqAI TTAA 2 cut(s) 231, 869
SatI GCNGC 3 cut(s) 902, 905, 908
Sau3AI GATC 2 cut(s) 320, 885
ScaI AGTACT 1 cut(s) 254
SchI GAGTC 1 cut(s) 841
ScrFI CCNGG 1 cut(s) 139
Sfr274I CTCGAG 1 cut(s) 248
SlaI CTCGAG 1 cut(s) 248
SmlI CTYRAG 1 cut(s) 248
SmoI CTYRAG 1 cut(s) 248
Sse9I AATT 3 cut(s) 616, 676, 771
SspMI CTAG 1 cut(s) 669
StyD4I CCNGG 1 cut(s) 137
TaaI ACNGT 3 cut(s) 413, 474, 586
TaiI ACGT 1 cut(s) 66
TaqI TCGA 4 cut(s) 249, 405, 418, 748
TasI AATT 3 cut(s) 616, 676, 771
TatI WGTACW 1 cut(s) 252
TfiI GAWTC 2 cut(s) 211, 375
Tru1I TTAA 2 cut(s) 231, 869
Tru9I TTAA 2 cut(s) 231, 869
TscAI CASTG 1 cut(s) 85
TseFI GTSAC 1 cut(s) 82
TseI GCWGC 3 cut(s) 901, 904, 907
Tsp45I GTSAC 1 cut(s) 82
TspDTI ATGAA 4 cut(s) 189, 362, 447, 497
TspGWI ACGGA 1 cut(s) 438
TspRI CASTG 1 cut(s) 85
XapI RAATTY 1 cut(s) 616
XbaI TCTAGA 1 cut(s) 668
XcmI CCANNNNNNNNNTGG 1 cut(s) 605
XhoI CTCGAG 1 cut(s) 248
XmnI GAANNNNTTC 1 cut(s) 616
XspI CTAG 1 cut(s) 669
ZrmI AGTACT 1 cut(s) 254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.