Rroxscaffold_3G00243920
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000076
Physical Location & Seq
Forward (+)
36373013 .. 36382373
9361 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00243920.1

Sequence Viewer

Length: 1350 bp
ATGCAGCGAGAGTTTCCAAAGGAGAATAGCAGAGGTAATCAACTTCCTGGTCAGAGGTTTTGCCCCATGGACGATGAACTAGTTCTCTTCTATCTCAAGCCCATGTTAAGCGGACAAAACGTGCCCGGCAGAAACCGCGTGGTGTTCGACTGCGACCTCTACAGTCAACAAGAACCTTGGGAGATATGGGAGGCCTTCAAGACCAGAAGACCACACGACTTGAGGCTCAACAAGGACATTTACTTCTTCACCCAACACAAGAAGATGAGTTCCACAGACAAGCGCGTACGCCGGAATGTTGGAAGTGGCACCTGGAAGGGCGACGACTCCGGCAAGCCAGTACGATCTGTTGAAACCGGTCATGTTGTTGGCTTGAAGAAAAGATATACTTACAAGAACGAAGACTCGGTGCACAACGGCTGTTGGATCTTGCATGAGTTCTACCTCGATCCATCACTAAGAGACAAGAAACATAAGGTGAAAGACTATGTTCTTTGTCTACTACGAAAGAATGGTGAACCCAAAACCAAGATCGAAAAGAAGAGAAAACAACGTGAAGAGGAAGAGGTTCTTGATAACAATTATGCCTTTGATGATGAAGAAAACTCGAACATGGAGCAGGAAGAGTTCCATGAGCCACAAGCAAAGCAACAACGAACCGTGCCATCCATTGATAATGCACCACTAACAATGCCCTCAGAAGATGATGCTGTATTCGCAGCTGAACTAGAAGAGTCATTGGAATGCTTTAAAGATGATAACGCACCACTAACAGTGCCATCAGAAGATGATGCGGCATTCGCAGCTGCACTAGAAGTGTCATTGGAATGCTTTGAAGATGATAATGCACCACTAACAATGTCATCAGAAGATGATGCTGCATTCGCAGCTGAACTAGAAGAGTCATTGGAATGCTTTGAAGATGATAATGCACCCTCAGAAGCTCACGCAATTGGCTTTCAAGTTGAGGAAAATAGTGGACAACAACCATTAGCAGCCGAGGTGCAGGCAGGCCCTTCATTTGGAGACGATCATGGGATATTTAATATGCTGCAGGAGGAAGATTTTCTCTTGGAGGAAATGTTAGAACAAATGGGTATAGAAAAGGAAGAACCAGTTCTTAATGGTGTGAGTAGTAATATAAATGTGGCTGAAGACATGGTAAACAGCACCCTTCTTTATGCTCCCACATCATCCATGTCTGCGGCCTATGATGGTTGCAATGATATGCAGGGGCAGACTTATAGTCAGGCCTGGGAGGGTCCAGACCCCCCTTGTTGGAGTCGATCAATTTTAGTCCTGGGGAAAACAACTTATTTTGGAGTGAAATGCAATGGTGTTCGTAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

449

Amino Acids

50.97

Weight (kDa)

4.56

Isoelectric Point (pI)

65.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 16 - 148 1.9e-24 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 308
AccI GTMKAC 1 cut(s) 499
AccII CGCG 2 cut(s) 138, 285
AciI CCGC 4 cut(s) 111, 136, 794, 1205
AclWI GGATC 2 cut(s) 434, 443
AcuI CTGAAG 1 cut(s) 1173
AfaI GTAC 2 cut(s) 288, 342
AfiI CCNNNNNNNGG 2 cut(s) 1022, 1278
AgeI ACCGGT 1 cut(s) 356
AgsI TTSAA 6 cut(s) 199, 353, 376, 836, 920, 962
AhdI GACNNNNNGTC 1 cut(s) 1245
AhlI ACTAGT 1 cut(s) 79
AjnI CCWGG 4 cut(s) 46, 311, 1253, 1299
AluBI AGCT 5 cut(s) 722, 806, 890, 944, 1347
AluI AGCT 5 cut(s) 722, 806, 890, 944, 1347
Alw21I GWGCWC 1 cut(s) 414
Alw26I GTCTC 2 cut(s) 456, 1020
Alw44I GTGCAC 1 cut(s) 410
AlwI GGATC 2 cut(s) 434, 443
AoxI GGCC 4 cut(s) 192, 1012, 1206, 1251
ApaLI GTGCAC 1 cut(s) 410
ApeKI GCWGC 8 cut(s) 4, 719, 803, 806, 878, 887, 995, 1051
AsiGI ACCGGT 1 cut(s) 356
Asp700I GAANNNNTTC 4 cut(s) 81, 567, 1065, 1116
AspLEI GCGC 1 cut(s) 285
AspS9I GGNCC 2 cut(s) 1013, 1262
AsuC2I CCSGG 1 cut(s) 126
AsuHPI GGTGA 3 cut(s) 241, 490, 527
AvaII GGWCC 1 cut(s) 1262
BaeGI GKGCMC 2 cut(s) 126, 414
BanI GGYRCC 1 cut(s) 308
BbsI GAAGAC 3 cut(s) 214, 408, 1161
Bbv12I GWGCWC 1 cut(s) 414
BbvI GCAGC 8 cut(s) 16, 731, 793, 815, 865, 899, 1007, 1038
BccI CCATC 4 cut(s) 460, 673, 787, 1208
BceAI ACGGC 1 cut(s) 433
BciT130I CCWGG 4 cut(s) 48, 313, 1255, 1301
BcnI CCSGG 1 cut(s) 126
BcoDI GTCTC 2 cut(s) 456, 1020
BcuI ACTAGT 1 cut(s) 79
BfaI CTAG 4 cut(s) 80, 728, 812, 896
BfmI CTRYAG 2 cut(s) 160, 1052
Bme1390I CCNGG 5 cut(s) 48, 126, 313, 1255, 1301
Bme18I GGWCC 1 cut(s) 1262
BmeRI GACNNNNNGTC 1 cut(s) 1245
BmgT120I GGNCC 2 cut(s) 1013, 1262
BmiI GGNNCC 2 cut(s) 310, 1263
BmrFI CCNGG 5 cut(s) 48, 126, 313, 1255, 1301
BmsI GCATC 3 cut(s) 697, 781, 865
BpiI GAAGAC 3 cut(s) 214, 408, 1161
BpuEI CTTGAG 2 cut(s) 80, 241
BpuMI CCSGG 1 cut(s) 126
BsaJI CCNNGG 5 cut(s) 66, 176, 999, 1254, 1300
BsaWI WCCGGW 1 cut(s) 356
BsaXI ACNNNNNCTCC 2 cut(s) 1067, 1097
Bsc4I CCNNNNNNNGG 2 cut(s) 1022, 1278
Bse118I RCCGGY 1 cut(s) 356
Bse1I ACTGG 2 cut(s) 338, 1115
Bse3DI GCAATG 2 cut(s) 1228, 1339
BseBI CCWGG 4 cut(s) 48, 313, 1255, 1301
BseDI CCNNGG 5 cut(s) 66, 176, 999, 1254, 1300
BseGI GGATG 2 cut(s) 665, 1193
BseLI CCNNNNNNNGG 2 cut(s) 1022, 1278
BseMI GCAATG 2 cut(s) 1228, 1339
BseMII CTCAG 2 cut(s) 711, 951
BseNI ACTGG 2 cut(s) 338, 1115
BseSI GKGCMC 2 cut(s) 126, 414
BseXI GCAGC 8 cut(s) 16, 731, 793, 815, 865, 899, 1007, 1038
BsgI GTGCAG 2 cut(s) 792, 1025
Bsh1236I CGCG 2 cut(s) 138, 285
BshFI GGCC 4 cut(s) 194, 1014, 1208, 1253
BshNI GGYRCC 1 cut(s) 308
BshTI ACCGGT 1 cut(s) 356
BsiHKAI GWGCWC 1 cut(s) 414
BsiSI CCGG 4 cut(s) 126, 292, 330, 357
BsiWI CGTACG 1 cut(s) 286
BslI CCNNNNNNNGG 2 cut(s) 1022, 1278
BsmAI GTCTC 2 cut(s) 456, 1020
BsmBI CGTCTC 1 cut(s) 1020
BsmI GAATGC 5 cut(s) 749, 797, 833, 881, 917
BsnI GGCC 4 cut(s) 194, 1014, 1208, 1253
Bsp1286I GDGCHC 2 cut(s) 126, 414
Bsp143I GATC 6 cut(s) 344, 426, 448, 531, 1030, 1286
Bsp19I CCATGG 1 cut(s) 66
BspACI CCGC 4 cut(s) 111, 136, 794, 1205
BspANI GGCC 4 cut(s) 194, 1014, 1208, 1253
BspCNI CTCAG 2 cut(s) 710, 950
BspFNI CGCG 2 cut(s) 138, 285
BspLI GGNNCC 2 cut(s) 310, 1263
BspMAI CTGCAG 1 cut(s) 1056
BspPI GGATC 2 cut(s) 434, 443
BspT107I GGYRCC 1 cut(s) 308
BsrDI GCAATG 2 cut(s) 1228, 1339
BsrFI RCCGGY 1 cut(s) 356
BsrI ACTGG 2 cut(s) 338, 1115
BssAI RCCGGY 1 cut(s) 356
BssECI CCNNGG 5 cut(s) 66, 176, 999, 1254, 1300
BssMI GATC 6 cut(s) 344, 426, 448, 531, 1030, 1286
BssT1I CCWWGG 2 cut(s) 66, 176
Bst2UI CCWGG 4 cut(s) 48, 313, 1255, 1301
Bst4CI ACNGT 3 cut(s) 164, 661, 775
Bst6I CTCTTC 7 cut(s) 92, 536, 552, 558, 618, 726, 894
BstC8I GCNNGC 3 cut(s) 335, 1008, 1012
BstDEI CTNAG 3 cut(s) 458, 697, 937
BstDSI CCRYGG 1 cut(s) 66
BstF5I GGATG 2 cut(s) 665, 1193
BstFNI CGCG 2 cut(s) 138, 285
BstHHI GCGC 1 cut(s) 285
BstKTI GATC 6 cut(s) 347, 429, 451, 534, 1033, 1289
BstMAI GTCTC 2 cut(s) 456, 1020
BstMBI GATC 6 cut(s) 344, 426, 448, 531, 1030, 1286
BstMWI GCNNNNNNNGC 6 cut(s) 135, 716, 800, 803, 884, 887
BstNI CCWGG 4 cut(s) 48, 313, 1255, 1301
BstSCI CCNGG 5 cut(s) 46, 124, 311, 1253, 1299
BstSFI CTRYAG 2 cut(s) 160, 1052
BstSLI GKGCMC 2 cut(s) 126, 414
BstUI CGCG 2 cut(s) 138, 285
BstV1I GCAGC 8 cut(s) 16, 731, 793, 815, 865, 899, 1007, 1038
BstV2I GAAGAC 3 cut(s) 214, 408, 1161
BstX2I RGATCY 1 cut(s) 426
BstYI RGATCY 1 cut(s) 426
BsuRI GGCC 4 cut(s) 194, 1014, 1208, 1253
BtgI CCRYGG 1 cut(s) 66
BtsCI GGATG 2 cut(s) 665, 1193
BtsIMutI CAGTG 1 cut(s) 780
Cac8I GCNNGC 3 cut(s) 335, 1008, 1012
CfoI GCGC 1 cut(s) 285
Cfr10I RCCGGY 1 cut(s) 356
Cfr13I GGNCC 2 cut(s) 1013, 1262
Csp6I GTAC 2 cut(s) 287, 341
CspAI ACCGGT 1 cut(s) 356
CspCI CAANNNNNGTGG 2 cut(s) 201, 236
CviAII CATG 9 cut(s) 67, 103, 362, 434, 613, 632, 1034, 1159, 1198
CviQI GTAC 2 cut(s) 287, 341
DdeI CTNAG 3 cut(s) 458, 697, 937
DpnI GATC 6 cut(s) 346, 428, 450, 533, 1032, 1288
DpnII GATC 6 cut(s) 344, 426, 448, 531, 1030, 1286
DraI TTTAAA 1 cut(s) 751
DriI GACNNNNNGTC 1 cut(s) 1245
Eam1104I CTCTTC 7 cut(s) 92, 536, 552, 558, 618, 726, 894
Eam1105I GACNNNNNGTC 1 cut(s) 1245
EarI CTCTTC 7 cut(s) 92, 536, 552, 558, 618, 726, 894
Eco130I CCWWGG 2 cut(s) 66, 176
Eco147I AGGCCT 2 cut(s) 194, 1253
Eco47I GGWCC 1 cut(s) 1262
Eco57I CTGAAG 1 cut(s) 1173
EcoO109I RGGNCCY 1 cut(s) 1013
EcoRII CCWGG 4 cut(s) 46, 311, 1253, 1299
EcoT14I CCWWGG 2 cut(s) 66, 176
ErhI CCWWGG 2 cut(s) 66, 176
Esp3I CGTCTC 1 cut(s) 1020
FaeI CATG 9 cut(s) 70, 106, 365, 437, 616, 635, 1037, 1162, 1201
FalI AAGNNNNNCTT 4 cut(s) 373, 405, 555, 587
FatI CATG 9 cut(s) 66, 102, 361, 433, 612, 631, 1033, 1158, 1197
FblI GTMKAC 1 cut(s) 499
FokI GGATG 2 cut(s) 652, 1180
FspBI CTAG 4 cut(s) 80, 728, 812, 896
GlaI GCGC 1 cut(s) 284
HaeIII GGCC 4 cut(s) 194, 1014, 1208, 1253
HapII CCGG 4 cut(s) 126, 292, 330, 357
HhaI GCGC 1 cut(s) 285
Hin1II CATG 9 cut(s) 70, 106, 365, 437, 616, 635, 1037, 1162, 1201
Hin6I GCGC 1 cut(s) 283
HinP1I GCGC 1 cut(s) 283
HincII GTYRAC 1 cut(s) 167
HindII GTYRAC 1 cut(s) 167
HinfI GANTC 5 cut(s) 326, 404, 734, 902, 1282
HpaII CCGG 4 cut(s) 126, 292, 330, 357
HphI GGTGA 3 cut(s) 241, 490, 527
Hpy166II GTNNAC 6 cut(s) 167, 412, 500, 518, 980, 1165
Hpy188I TCNGA 5 cut(s) 54, 700, 784, 868, 940
Hpy188III TCNNGA 3 cut(s) 199, 572, 1265
Hpy8I GTNNAC 6 cut(s) 167, 412, 500, 518, 980, 1165
Hpy99I CGWCG 1 cut(s) 326
HpyAV CCTTC 4 cut(s) 205, 310, 1026, 1184
HpyCH4III ACNGT 3 cut(s) 164, 661, 775
HpyCH4IV ACGT 2 cut(s) 120, 553
HpyF10VI GCNNNNNNNGC 6 cut(s) 135, 716, 800, 803, 884, 887
HpyF3I CTNAG 3 cut(s) 458, 697, 937
HpySE526I ACGT 2 cut(s) 120, 553
Hsp92II CATG 9 cut(s) 70, 106, 365, 437, 616, 635, 1037, 1162, 1201
HspAI GCGC 1 cut(s) 283
Kzo9I GATC 6 cut(s) 344, 426, 448, 531, 1030, 1286
LmnI GCTCC 2 cut(s) 616, 1189
Lsp1109I GCAGC 8 cut(s) 16, 731, 793, 815, 865, 899, 1007, 1038
LweI GCATC 3 cut(s) 697, 781, 865
MaeI CTAG 4 cut(s) 80, 728, 812, 896
MaeII ACGT 2 cut(s) 120, 553
MalI GATC 6 cut(s) 346, 428, 450, 533, 1032, 1288
MboI GATC 6 cut(s) 344, 426, 448, 531, 1030, 1286
MfeI CAATTG 1 cut(s) 951
MflI RGATCY 1 cut(s) 426
MhlI GDGCHC 2 cut(s) 126, 414
MluCI AATT 3 cut(s) 580, 951, 1290
MlyI GAGTC 5 cut(s) 320, 398, 743, 911, 1291
MmeI TCCRAC 3 cut(s) 280, 404, 1259
MroXI GAANNNNTTC 4 cut(s) 81, 567, 1065, 1116
MseI TTAA 4 cut(s) 107, 750, 1044, 1122
MslI CAYNNNNRTG 3 cut(s) 742, 826, 910
MspA1I CMGCKG 3 cut(s) 722, 806, 890
MspI CCGG 4 cut(s) 126, 292, 330, 357
MspR9I CCNGG 5 cut(s) 48, 126, 313, 1255, 1301
MunI CAATTG 1 cut(s) 951
Mva1269I GAATGC 5 cut(s) 749, 797, 833, 881, 917
MvaI CCWGG 4 cut(s) 48, 313, 1255, 1301
MvnI CGCG 2 cut(s) 138, 285
MwoI GCNNNNNNNGC 6 cut(s) 135, 716, 800, 803, 884, 887
NciI CCSGG 1 cut(s) 126
NcoI CCATGG 1 cut(s) 66
NdeII GATC 6 cut(s) 344, 426, 448, 531, 1030, 1286
NlaIII CATG 9 cut(s) 70, 106, 365, 437, 616, 635, 1037, 1162, 1201
NlaIV GGNNCC 2 cut(s) 310, 1263
NmeAIII GCCGAG 1 cut(s) 1024
PceI AGGCCT 2 cut(s) 194, 1253
PctI GAATGC 5 cut(s) 749, 797, 833, 881, 917
PdmI GAANNNNTTC 4 cut(s) 81, 567, 1065, 1116
Pfl23II CGTACG 1 cut(s) 286
PinAI ACCGGT 1 cut(s) 356
PleI GAGTC 5 cut(s) 320, 398, 742, 910, 1290
PpsI GAGTC 5 cut(s) 320, 398, 742, 910, 1290
Psp6I CCWGG 4 cut(s) 46, 311, 1253, 1299
PspGI CCWGG 4 cut(s) 46, 311, 1253, 1299
PspLI CGTACG 1 cut(s) 286
PspN4I GGNNCC 2 cut(s) 310, 1263
PspPI GGNCC 2 cut(s) 1013, 1262
PstI CTGCAG 1 cut(s) 1056
PsuI RGATCY 1 cut(s) 426
PvuII CAGCTG 3 cut(s) 722, 806, 890
RsaI GTAC 2 cut(s) 288, 342
RsaNI GTAC 2 cut(s) 287, 341
RseI CAYNNNNRTG 3 cut(s) 742, 826, 910
SaqAI TTAA 4 cut(s) 107, 750, 1044, 1122
Sau3AI GATC 6 cut(s) 344, 426, 448, 531, 1030, 1286
Sau96I GGNCC 2 cut(s) 1013, 1262
SchI GAGTC 5 cut(s) 320, 398, 743, 911, 1291
ScrFI CCNGG 5 cut(s) 48, 126, 313, 1255, 1301
SduI GDGCHC 2 cut(s) 126, 414
SfaNI GCATC 3 cut(s) 697, 781, 865
SfcI CTRYAG 2 cut(s) 160, 1052
SinI GGWCC 1 cut(s) 1262
SmiMI CAYNNNNRTG 3 cut(s) 742, 826, 910
SmlI CTYRAG 2 cut(s) 95, 220
SmoI CTYRAG 2 cut(s) 95, 220
SpeI ACTAGT 1 cut(s) 79
Sse9I AATT 3 cut(s) 580, 951, 1290
SseBI AGGCCT 2 cut(s) 194, 1253
SsiI CCGC 4 cut(s) 111, 136, 794, 1205
SspMI CTAG 4 cut(s) 80, 728, 812, 896
StuI AGGCCT 2 cut(s) 194, 1253
StyD4I CCNGG 5 cut(s) 46, 124, 311, 1253, 1299
StyI CCWWGG 2 cut(s) 66, 176
TaaI ACNGT 3 cut(s) 164, 661, 775
TaiI ACGT 2 cut(s) 123, 556
TaqI TCGA 5 cut(s) 147, 447, 534, 608, 1285
TasI AATT 3 cut(s) 580, 951, 1290
TauI GCSGC 2 cut(s) 797, 1208
Tru1I TTAA 4 cut(s) 107, 750, 1044, 1122
Tru9I TTAA 4 cut(s) 107, 750, 1044, 1122
TscAI CASTG 1 cut(s) 780
TseI GCWGC 8 cut(s) 4, 719, 803, 806, 878, 887, 995, 1051
TspDTI ATGAA 3 cut(s) 90, 612, 1008
TspRI CASTG 1 cut(s) 780
VneI GTGCAC 1 cut(s) 410
VpaK11BI GGWCC 1 cut(s) 1262
XmiI GTMKAC 1 cut(s) 499
XmnI GAANNNNTTC 4 cut(s) 81, 567, 1065, 1116
XspI CTAG 4 cut(s) 80, 728, 812, 896
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.