Rorug01G0120600
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000076
Physical Location & Seq
Reverse (-)
21049261 .. 21052164
2904 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0120600.1

Sequence Viewer

Length: 1458 bp
ATGAGCTGCGGCGGCTTCACAGTTCCACCGGGATACGGATTCCATCCCACCGACGAGAAGCTGCTTAGTGACTTGGAGGAGAAGAATCAGTGCAAGGACTCCGAGATCACCACCATCATCCCTGAAATCGATGTGTGCAAGCACGAGCCTCACGAGTTACCAGAACTGGCATTCACAAGGGCGCAAAATCTGGGCAGGAAGTTTTTCTCTTTTTTCTTCTTCTGGTTTGCATGGGCAGAGTCTTGGGACAGTCAGGACAAGTGGTACTTCTTCACTCCGCGTGAATACAAGTACCCTAACAGCAGACGCTCCAACAGGACTACAGGGCAAGGGTTCTGGAAGATCACAGGCAAGGACAGAGACATCAAGGCCCTTCGCTCCAAAGCTGTGATTGGGAGAAAGAGGACCTTGACCTTCTACAAACGTGGAGTGCCGAAATCCCAGAAGACTGGCTGGGTCATTCATGAGTATTATCTCATTCAGGCACATTCTGATCCTCCTAAGCAGATAGGGGACTTTGTAGTCTGTTGCTTGAAGTATAAGTCAGACAACTCTGATCATGATAAGGATGCCCCATTCTGCGATCGAGGTAGCAGCAGCTGCAGTATGGCCTCCAATGTTGAAAATCAAGCTGAAGAAAATTGGGCATCCATTAAGCAGGTTAACGTTGTTCCAATTCCCAACGGAAATGATGATGAAGCTGAAACTGGTGGTGGTACGATTACAGAAGAAGAGGAATACCTGGCTTTAAAGGAGCTGGAAGATGCTCTTCAAATTCCCATTGGCAATCCTCATGACTTCCAAGGCATGCAAACTGATCCTTGTCATATAGAAGAGAATGATCTTTCAACCTCTGTTGAAGACCGACCTGATAAAGGCAATTCATCTGATATGATTGAAGAGCTACTAGATGACCCACAAAATCTGGATTTACTCTTTCATCCGCCTGCGCCACCTCAACTGCATCAGCTACATCAGTCACCCATGTATACCACCAATGTCCATAATGATGAATGTCGTAAGAGGACATATCCATTTGAGGATAATGACCCTTCTCTTACAAAGAAGAACAATATTTCAACCAATGATGATAACGAATTAGTTAGCAATACCGCATCTAGTTCTGAAAATAAAGCTGCGAATATGATTCCAGAGGGATATCCTCAACCAGGAGCAAATCTAGGATCAGAATTTGAATCATTTCTGCCAAAGGATTACGATTATACACTACCATCAATAAACGGAGGACTGGGAGATTTTCCCCATGACAATAATTTTATTGAGTGGGATGATTTGCCATCCTTATACGAAGGTATGGACTCTTCTCCCGTAAAGTTCTCACATACAGTTATTGATGGTGGTAGAAGAGTAATCAATGACGGAAACACCGAAGTAGTAGATGGATCAATAAACGATTATTCTGCATTAGCCATTGGAGCAACGCTCCAGAGTAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

485

Amino Acids

54.67

Weight (kDa)

4.69

Isoelectric Point (pI)

52.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 9 - 158 3.1e-29 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 521
Acc36I ACCTGC 1 cut(s) 649
AccI GTMKAC 1 cut(s) 989
AccII CGCG 1 cut(s) 280
AciI CCGC 5 cut(s) 9, 12, 278, 944, 1113
AclI AACGTT 1 cut(s) 666
AclWI GGATC 4 cut(s) 488, 812, 1192, 1411
AcsI RAATTY 2 cut(s) 774, 1190
AcuI CTGAAG 1 cut(s) 654
AfaI GTAC 3 cut(s) 266, 293, 718
AfiI CCNNNNNNNGG 3 cut(s) 35, 875, 1169
AgsI TTSAA 8 cut(s) 535, 623, 773, 849, 860, 899, 1080, 1196
AjnI CCWGG 2 cut(s) 741, 1168
Alw26I GTCTC 1 cut(s) 354
AlwI GGATC 4 cut(s) 488, 812, 1192, 1411
AlwNI CAGNNNCTG 1 cut(s) 600
AoxI GGCC 2 cut(s) 369, 609
ApeKI GCWGC 6 cut(s) 6, 61, 594, 597, 600, 1136
ApoI RAATTY 2 cut(s) 774, 1190
Asp700I GAANNNNTTC 2 cut(s) 203, 1200
AspLEI GCGC 2 cut(s) 184, 952
AspS9I GGNCC 2 cut(s) 370, 405
AsuC2I CCSGG 1 cut(s) 30
AsuHPI GGTGA 2 cut(s) 100, 972
AvaII GGWCC 1 cut(s) 405
BarI GAAGNNNNNNTAC 2 cut(s) 1306, 1338
BauI CACGAG 2 cut(s) 143, 152
BbsI GAAGAC 2 cut(s) 452, 867
BbvI GCAGC 5 cut(s) 48, 587, 606, 609, 1123
BccI CCATC 6 cut(s) 51, 122, 1240, 1306, 1349, 1394
BcgI CGANNNNNNTGC 2 cut(s) 1403, 1437
BciT130I CCWGG 2 cut(s) 743, 1170
BciVI GTATCC 1 cut(s) 26
BclI TGATCA 1 cut(s) 556
BcnI CCSGG 1 cut(s) 30
BcoDI GTCTC 1 cut(s) 354
BfaI CTAG 3 cut(s) 908, 1119, 1181
BfmI CTRYAG 2 cut(s) 321, 601
BfuAI ACCTGC 1 cut(s) 649
BfuI GTATCC 1 cut(s) 26
BisI GCNGC 8 cut(s) 7, 10, 13, 62, 595, 598, 601, 1137
BlsI GCNGC 8 cut(s) 8, 11, 14, 63, 596, 599, 602, 1138
Bme1390I CCNGG 3 cut(s) 30, 743, 1170
Bme18I GGWCC 1 cut(s) 405
BmgT120I GGNCC 2 cut(s) 370, 405
BmrFI CCNGG 3 cut(s) 30, 743, 1170
BmrI ACTGGG 1 cut(s) 1259
BmsI GCATC 5 cut(s) 559, 656, 754, 973, 1124
BmuI ACTGGG 1 cut(s) 1259
BpiI GAAGAC 2 cut(s) 452, 867
BplI GAGNNNNNCTC 1 cut(s) 1428
BpmI CTGGAG 1 cut(s) 1430
Bpu10I CCTNAGC 1 cut(s) 501
BpuMI CCSGG 1 cut(s) 30
Bsa29I ATCGAT 1 cut(s) 129
BsaJI CCNNGG 1 cut(s) 802
Bsc4I CCNNNNNNNGG 3 cut(s) 35, 875, 1169
Bse1I ACTGG 4 cut(s) 171, 454, 712, 1254
BseBI CCWGG 2 cut(s) 743, 1170
BseCI ATCGAT 1 cut(s) 129
BseDI CCNNGG 1 cut(s) 802
BseGI GGATG 7 cut(s) 43, 117, 574, 647, 940, 1294, 1298
BseLI CCNNNNNNNGG 3 cut(s) 35, 875, 1169
BseNI ACTGG 4 cut(s) 171, 454, 712, 1254
BseRI GAGGAG 1 cut(s) 92
BseXI GCAGC 5 cut(s) 48, 587, 606, 609, 1123
BseYI CCCAGC 1 cut(s) 453
Bsh1236I CGCG 1 cut(s) 280
Bsh1285I CGRYCG 1 cut(s) 586
BshFI GGCC 2 cut(s) 371, 611
BshVI ATCGAT 1 cut(s) 129
BsiEI CGRYCG 1 cut(s) 586
BsiSI CCGG 1 cut(s) 29
BslFI GGGAC 2 cut(s) 260, 527
BslI CCNNNNNNNGG 3 cut(s) 35, 875, 1169
BsmAI GTCTC 1 cut(s) 354
BsmFI GGGAC 2 cut(s) 260, 527
BsmI GAATGC 1 cut(s) 170
BsnI GGCC 2 cut(s) 371, 611
Bsp143I GATC 9 cut(s) 105, 342, 493, 556, 583, 817, 841, 1184, 1403
BspACI CCGC 5 cut(s) 9, 12, 278, 944, 1113
BspANI GGCC 2 cut(s) 371, 611
BspDI ATCGAT 1 cut(s) 129
BspFNI CGCG 1 cut(s) 280
BspHI TCATGA 3 cut(s) 463, 559, 793
BspMAI CTGCAG 1 cut(s) 605
BspMI ACCTGC 1 cut(s) 649
BspPI GGATC 4 cut(s) 488, 812, 1192, 1411
BspQI GCTCTTC 2 cut(s) 774, 894
BsrI ACTGG 4 cut(s) 171, 454, 712, 1254
BssECI CCNNGG 1 cut(s) 802
BssMI GATC 9 cut(s) 105, 342, 493, 556, 583, 817, 841, 1184, 1403
BssNAI GTATAC 1 cut(s) 990
BssSI CACGAG 2 cut(s) 143, 152
BssT1I CCWWGG 1 cut(s) 802
Bst1107I GTATAC 1 cut(s) 990
Bst2BI CACGAG 2 cut(s) 143, 152
Bst2UI CCWGG 2 cut(s) 743, 1170
Bst4CI ACNGT 3 cut(s) 22, 251, 1348
Bst6I CTCTTC 6 cut(s) 726, 774, 828, 894, 1327, 1360
BstAPI GCANNNNNTGC 1 cut(s) 600
BstC8I GCNNGC 3 cut(s) 140, 809, 948
BstDEI CTNAG 2 cut(s) 65, 501
BstENI CCTNNNNNAGG 2 cut(s) 873, 1167
BstF5I GGATG 7 cut(s) 43, 117, 574, 647, 940, 1294, 1298
BstFNI CGCG 1 cut(s) 280
BstHHI GCGC 2 cut(s) 184, 952
BstKTI GATC 9 cut(s) 108, 345, 496, 559, 586, 820, 844, 1187, 1406
BstMAI GTCTC 1 cut(s) 354
BstMBI GATC 9 cut(s) 105, 342, 493, 556, 583, 817, 841, 1184, 1403
BstMCI CGRYCG 1 cut(s) 586
BstMWI GCNNNNNNNGC 3 cut(s) 12, 600, 1436
BstNI CCWGG 2 cut(s) 743, 1170
BstNSI RCATGY 1 cut(s) 811
BstSCI CCNGG 3 cut(s) 28, 741, 1168
BstSFI CTRYAG 2 cut(s) 321, 601
BstUI CGCG 1 cut(s) 280
BstV1I GCAGC 5 cut(s) 48, 587, 606, 609, 1123
BstV2I GAAGAC 2 cut(s) 452, 867
BstXI CCANNNNNNTGG 1 cut(s) 449
BstZ17I GTATAC 1 cut(s) 990
Bsu15I ATCGAT 1 cut(s) 129
BsuI GTATCC 1 cut(s) 26
BsuRI GGCC 2 cut(s) 371, 611
BsuTUI ATCGAT 1 cut(s) 129
BtsCI GGATG 7 cut(s) 43, 117, 574, 647, 940, 1294, 1298
BtsIMutI CAGTG 1 cut(s) 95
BveI ACCTGC 1 cut(s) 649
Cac8I GCNNGC 3 cut(s) 140, 809, 948
CaiI CAGNNNCTG 1 cut(s) 600
CciI TCATGA 3 cut(s) 463, 559, 793
CfoI GCGC 2 cut(s) 184, 952
Cfr13I GGNCC 2 cut(s) 370, 405
ClaI ATCGAT 1 cut(s) 129
CseI GACGC 1 cut(s) 315
Csp6I GTAC 3 cut(s) 265, 292, 717
CviAII CATG 7 cut(s) 231, 464, 560, 794, 808, 985, 1265
CviQI GTAC 3 cut(s) 265, 292, 717
DdeI CTNAG 2 cut(s) 65, 501
DpnI GATC 9 cut(s) 107, 344, 495, 558, 585, 819, 843, 1186, 1405
DpnII GATC 9 cut(s) 105, 342, 493, 556, 583, 817, 841, 1184, 1403
DraI TTTAAA 1 cut(s) 750
DrdI GACNNNNNNGTC 1 cut(s) 521
DseDI GACNNNNNNGTC 1 cut(s) 521
Eam1104I CTCTTC 6 cut(s) 726, 774, 828, 894, 1327, 1360
EarI CTCTTC 6 cut(s) 726, 774, 828, 894, 1327, 1360
EciI GGCGGA 1 cut(s) 933
Eco130I CCWWGG 1 cut(s) 802
Eco32I GATATC 1 cut(s) 1160
Eco47I GGWCC 1 cut(s) 405
Eco57I CTGAAG 1 cut(s) 654
EcoNI CCTNNNNNAGG 2 cut(s) 873, 1167
EcoO109I RGGNCCY 2 cut(s) 370, 405
EcoRII CCWGG 2 cut(s) 741, 1168
EcoRV GATATC 1 cut(s) 1160
EcoT14I CCWWGG 1 cut(s) 802
ErhI CCWWGG 1 cut(s) 802
FaeI CATG 7 cut(s) 234, 467, 563, 797, 811, 988, 1268
FalI AAGNNNNNCTT 6 cut(s) 251, 283, 392, 424, 753, 785
FaqI GGGAC 2 cut(s) 260, 527
FatI CATG 7 cut(s) 230, 463, 559, 793, 807, 984, 1264
FbaI TGATCA 1 cut(s) 556
FblI GTMKAC 1 cut(s) 989
Fnu4HI GCNGC 8 cut(s) 7, 10, 13, 62, 595, 598, 601, 1137
FokI GGATG 7 cut(s) 30, 104, 581, 634, 927, 1285, 1301
Fsp4HI GCNGC 8 cut(s) 7, 10, 13, 62, 595, 598, 601, 1137
FspBI CTAG 3 cut(s) 908, 1119, 1181
GlaI GCGC 2 cut(s) 183, 951
GluI GCNGC 8 cut(s) 7, 10, 13, 62, 595, 598, 601, 1137
GsaI CCCAGC 1 cut(s) 457
GsuI CTGGAG 1 cut(s) 1430
HaeIII GGCC 2 cut(s) 371, 611
HapII CCGG 1 cut(s) 29
HgaI GACGC 1 cut(s) 315
HhaI GCGC 2 cut(s) 184, 952
Hin1II CATG 7 cut(s) 234, 467, 563, 797, 811, 988, 1268
Hin6I GCGC 2 cut(s) 182, 950
HinP1I GCGC 2 cut(s) 182, 950
HincII GTYRAC 1 cut(s) 664
HindII GTYRAC 1 cut(s) 664
HinfI GANTC 7 cut(s) 39, 85, 98, 239, 1147, 1196, 1319
HpaI GTTAAC 1 cut(s) 664
HpaII CCGG 1 cut(s) 29
HphI GGTGA 2 cut(s) 100, 972
Hpy166II GTNNAC 2 cut(s) 664, 990
Hpy188I TCNGA 7 cut(s) 103, 493, 547, 556, 889, 1126, 1189
Hpy188III TCNNGA 9 cut(s) 152, 254, 337, 464, 560, 794, 926, 1151, 1447
Hpy8I GTNNAC 2 cut(s) 664, 990
Hpy99I CGWCG 1 cut(s) 56
HpyAV CCTTC 4 cut(s) 383, 424, 1062, 1304
HpyCH4III ACNGT 3 cut(s) 22, 251, 1348
HpyCH4IV ACGT 2 cut(s) 424, 666
HpyCH4V TGCA 7 cut(s) 93, 138, 230, 603, 811, 964, 1424
HpyF10VI GCNNNNNNNGC 3 cut(s) 12, 600, 1436
HpyF3I CTNAG 2 cut(s) 65, 501
HpySE526I ACGT 2 cut(s) 424, 666
Hsp92II CATG 7 cut(s) 234, 467, 563, 797, 811, 988, 1268
HspAI GCGC 2 cut(s) 182, 950
Ksp22I TGATCA 1 cut(s) 556
KspAI GTTAAC 1 cut(s) 664
Kzo9I GATC 9 cut(s) 105, 342, 493, 556, 583, 817, 841, 1184, 1403
LguI GCTCTTC 2 cut(s) 774, 894
LmnI GCTCC 6 cut(s) 314, 383, 754, 1172, 1436, 1449
Lsp1109I GCAGC 5 cut(s) 48, 587, 606, 609, 1123
LweI GCATC 5 cut(s) 559, 656, 754, 973, 1124
MaeI CTAG 3 cut(s) 908, 1119, 1181
MaeII ACGT 2 cut(s) 424, 666
MaeIII GTNAC 3 cut(s) 68, 156, 978
MalI GATC 9 cut(s) 107, 344, 495, 558, 585, 819, 843, 1186, 1405
MboI GATC 9 cut(s) 105, 342, 493, 556, 583, 817, 841, 1184, 1403
MluCI AATT 7 cut(s) 640, 675, 774, 880, 1097, 1190, 1273
MlyI GAGTC 3 cut(s) 92, 248, 1313
MmeI TCCRAC 1 cut(s) 336
MroXI GAANNNNTTC 2 cut(s) 203, 1200
MseI TTAA 3 cut(s) 654, 663, 749
MslI CAYNNNNRTG 1 cut(s) 1008
MspA1I CMGCKG 1 cut(s) 600
MspI CCGG 1 cut(s) 29
MspR9I CCNGG 3 cut(s) 30, 743, 1170
Mva1269I GAATGC 1 cut(s) 170
MvaI CCWGG 2 cut(s) 743, 1170
MvnI CGCG 1 cut(s) 280
MwoI GCNNNNNNNGC 3 cut(s) 12, 600, 1436
NciI CCSGG 1 cut(s) 30
NdeII GATC 9 cut(s) 105, 342, 493, 556, 583, 817, 841, 1184, 1403
NlaIII CATG 7 cut(s) 234, 467, 563, 797, 811, 988, 1268
NmuCI GTSAC 2 cut(s) 68, 978
NspI RCATGY 1 cut(s) 811
PaeI GCATGC 1 cut(s) 811
PagI TCATGA 3 cut(s) 463, 559, 793
PciSI GCTCTTC 2 cut(s) 774, 894
PcsI WCGNNNNNNNCGW 2 cut(s) 150, 1386
PctI GAATGC 1 cut(s) 170
PdmI GAANNNNTTC 2 cut(s) 203, 1200
PfeI GAWTC 4 cut(s) 39, 85, 1147, 1196
PkrI GCNGC 8 cut(s) 8, 11, 14, 63, 596, 599, 602, 1138
Ple19I CGATCG 1 cut(s) 586
PleI GAGTC 3 cut(s) 92, 247, 1313
PpsI GAGTC 3 cut(s) 92, 247, 1313
PpuMI RGGWCCY 1 cut(s) 405
Psp1406I AACGTT 1 cut(s) 666
Psp5II RGGWCCY 1 cut(s) 405
Psp6I CCWGG 2 cut(s) 741, 1168
PspFI CCCAGC 1 cut(s) 453
PspGI CCWGG 2 cut(s) 741, 1168
PspPI GGNCC 2 cut(s) 370, 405
PspPPI RGGWCCY 1 cut(s) 405
PstI CTGCAG 1 cut(s) 605
PstNI CAGNNNCTG 1 cut(s) 600
PvuI CGATCG 1 cut(s) 586
PvuII CAGCTG 1 cut(s) 600
RsaI GTAC 3 cut(s) 266, 293, 718
RsaNI GTAC 3 cut(s) 265, 292, 717
RseI CAYNNNNRTG 1 cut(s) 1008
SapI GCTCTTC 2 cut(s) 774, 894
SaqAI TTAA 3 cut(s) 654, 663, 749
SatI GCNGC 8 cut(s) 7, 10, 13, 62, 595, 598, 601, 1137
Sau3AI GATC 9 cut(s) 105, 342, 493, 556, 583, 817, 841, 1184, 1403
Sau96I GGNCC 2 cut(s) 370, 405
SchI GAGTC 3 cut(s) 92, 248, 1313
ScrFI CCNGG 3 cut(s) 30, 743, 1170
SfaNI GCATC 5 cut(s) 559, 656, 754, 973, 1124
SfcI CTRYAG 2 cut(s) 321, 601
SinI GGWCC 1 cut(s) 405
SmiMI CAYNNNNRTG 1 cut(s) 1008
SphI GCATGC 1 cut(s) 811
Sse9I AATT 7 cut(s) 640, 675, 774, 880, 1097, 1190, 1273
SsiI CCGC 5 cut(s) 9, 12, 278, 944, 1113
SspI AATATT 1 cut(s) 1075
SspMI CTAG 3 cut(s) 908, 1119, 1181
StyD4I CCNGG 3 cut(s) 28, 741, 1168
StyI CCWWGG 1 cut(s) 802
TaaI ACNGT 3 cut(s) 22, 251, 1348
TaiI ACGT 2 cut(s) 427, 669
TaqI TCGA 2 cut(s) 129, 586
TaqII GACCGA 1 cut(s) 879
TasI AATT 7 cut(s) 640, 675, 774, 880, 1097, 1190, 1273
TauI GCSGC 2 cut(s) 12, 15
TfiI GAWTC 4 cut(s) 39, 85, 1147, 1196
Tru1I TTAA 3 cut(s) 654, 663, 749
Tru9I TTAA 3 cut(s) 654, 663, 749
TscAI CASTG 1 cut(s) 95
TseFI GTSAC 2 cut(s) 68, 978
TseI GCWGC 6 cut(s) 6, 61, 594, 597, 600, 1136
Tsp45I GTSAC 2 cut(s) 68, 978
TspDTI ATGAA 5 cut(s) 452, 711, 873, 929, 1026
TspGWI ACGGA 4 cut(s) 51, 699, 1257, 1395
TspRI CASTG 1 cut(s) 95
VpaK11BI GGWCC 1 cut(s) 405
XagI CCTNNNNNAGG 2 cut(s) 873, 1167
XapI RAATTY 2 cut(s) 774, 1190
XceI RCATGY 1 cut(s) 811
XmiI GTMKAC 1 cut(s) 989
XmnI GAANNNNTTC 2 cut(s) 203, 1200
XspI CTAG 3 cut(s) 908, 1119, 1181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.