Rh2DG526800
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000076
Physical Location & Seq
Forward (+)
75206635 .. 75207930
1296 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG526800.1

Sequence Viewer

Length: 1296 bp
ATGCAGCAAGAGTTTGCAATGGAGGAGAGCAGAGGCAATCAACTTCCTGGAGAGAGGTTCTGCCCCATGGAGGACGAATTAGTTCTCTTCTACCTTAAGCCTCTCTTGAGCGGAGAGAAGGTGCCCGGCAGAAACAGCGTGGTGTTCGACTGCGACCTCTACGGTCGCCAAGAACCTTGGGAGATATGGGAGGCCTACAAGACCAGAAGACCAAACGACTTGAGGCTCAACAAGGACATCTACTTCTTCACCCAACACAAGAAGATGAGTTCCACAGACTCACGCATACGCCGGACCGTTGGAAACGGCACCTGGAAGGGCGACGACTCAGGCAAGCCAGTAAAATCTTTGGAGACTGGTCGTGTGGTTGGCTTGAAGAAAAGACTTACTTACAAGAACGAAGCATCGGTGCACAACGGTTGTTGGATCTTGCATGAGTTCTACCTTGATCGATCACTCAGAGACAAGAAACAAAAGGTGAAAGACTATGTTCTTTGTCTGCTACGAAAAAATGGTGAACCCAAAACCAAGATCGAAAAGAAGAGAAAGCAACGTGAAGAGGAAGAGGTTCTTGACAACAATTATGCCTGTGATGATGGAGAGAACACAAACAAGGAGCAAGAAGAGTTGCTTGAGCCACAAGCGAAGCGACAACGAAACGTTCCATCCATTGATTATGCACTAGTACCAATGCCATCAGAAGAGGATGCATTCGCAGCTGAGTTAGAAGAGACTTTGCCATGCTTTGAAGATGATAATGCACCCTCAGAAGCTGAAGCAATTGGCTTTCAAGGTGAGGAGAATTGGGGACTCCAACAGTTAGCTTCCGAAGTGCAATCAGGCCCTTCATTTGGAGAGGATCATGGAATATTTATTCCACTACCAGAGGAAGATTTTCTCTTGGAGGAAATGGTAGAACAAATGGGTATGGTAGAAATGGAACACCTGCTAGTTGTTAATGGTGCGACTAGTAATATGGAAGTGGCGGAAGAAAACTTGCTAAACAACACCCTTCTTCACACTCCGGCATCATCCTTGTCTGCGGCCTATGATGGCACTGATATGCCATATTTATCCATGGAAAATGGTTGCATTGATTCAGCTGGAAGCAACAATGTTTGTGGAGGATCGATTGACTTTCAGGATGGTGCGTACTGGCCTGAGTCTTTAGTGGAGGTCCTTACTGAAGAGCAACAAAAGATAGCTGATAAAGATTGTTCAGATTGGTTGGAGTCGATCAGTTTTAGTCGTGAGGAAGACAACTTCCTTTGGAGTGAAGTGCAATGGTGTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

431

Amino Acids

49.27

Weight (kDa)

4.53

Isoelectric Point (pI)

58.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 16 - 148 1.1e-23 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 954
Acc36I ACCTGC 1 cut(s) 954
AccB1I GGYRCC 2 cut(s) 121, 308
AccBSI CCGCTC 1 cut(s) 111
AciI CCGC 3 cut(s) 111, 986, 1043
AclI AACGTT 1 cut(s) 660
AclWI GGATC 3 cut(s) 434, 867, 1135
AcuI CTGAAG 2 cut(s) 795, 1206
AfaI GTAC 2 cut(s) 687, 1154
AfiI CCNNNNNNNGG 2 cut(s) 70, 851
AflII CTTAAG 1 cut(s) 95
AgsI TTSAA 3 cut(s) 376, 749, 791
AhlI ACTAGT 2 cut(s) 682, 968
AjnI CCWGG 2 cut(s) 46, 311
AluBI AGCT 5 cut(s) 719, 773, 824, 1103, 1205
AluI AGCT 5 cut(s) 719, 773, 824, 1103, 1205
Alw21I GWGCWC 1 cut(s) 414
Alw26I GTCTC 3 cut(s) 347, 456, 725
Alw44I GTGCAC 1 cut(s) 410
AlwI GGATC 3 cut(s) 434, 867, 1135
AlwNI CAGNNNCTG 1 cut(s) 773
AoxI GGCC 4 cut(s) 192, 841, 1044, 1157
ApaLI GTGCAC 1 cut(s) 410
ApeKI GCWGC 2 cut(s) 4, 716
Asp700I GAANNNNTTC 3 cut(s) 81, 567, 894
AspS9I GGNCC 3 cut(s) 294, 842, 1177
AsuC2I CCSGG 1 cut(s) 126
AsuHPI GGTGA 4 cut(s) 241, 490, 527, 806
AvaII GGWCC 2 cut(s) 294, 1177
BaeGI GKGCMC 2 cut(s) 126, 414
BanI GGYRCC 2 cut(s) 121, 308
BbsI GAAGAC 2 cut(s) 214, 1263
Bbv12I GWGCWC 1 cut(s) 414
BbvI GCAGC 2 cut(s) 16, 728
BccI CCATC 5 cut(s) 590, 673, 703, 1046, 1139
BceAI ACGGC 1 cut(s) 322
BciT130I CCWGG 2 cut(s) 48, 313
BcnI CCSGG 1 cut(s) 126
BcoDI GTCTC 3 cut(s) 347, 456, 725
BcuI ACTAGT 2 cut(s) 682, 968
BfaI CTAG 3 cut(s) 683, 950, 969
BfrI CTTAAG 1 cut(s) 95
BfuAI ACCTGC 1 cut(s) 954
BisI GCNGC 3 cut(s) 5, 717, 1044
BlsI GCNGC 3 cut(s) 6, 718, 1045
Bme1390I CCNGG 3 cut(s) 48, 126, 313
Bme18I GGWCC 2 cut(s) 294, 1177
BmgT120I GGNCC 3 cut(s) 294, 842, 1177
BmiI GGNNCC 2 cut(s) 123, 310
BmrFI CCNGG 3 cut(s) 48, 126, 313
BmsI GCATC 3 cut(s) 413, 697, 1037
BpiI GAAGAC 2 cut(s) 214, 1263
BpmI CTGGAG 1 cut(s) 69
BpuEI CTTGAG 3 cut(s) 127, 241, 653
BpuMI CCSGG 1 cut(s) 126
Bsa29I ATCGAT 2 cut(s) 451, 1130
BsaJI CCNNGG 3 cut(s) 66, 176, 1077
BsaXI ACNNNNNCTCC 2 cut(s) 105, 135
Bsc4I CCNNNNNNNGG 2 cut(s) 70, 851
Bse1I ACTGG 3 cut(s) 338, 361, 1160
Bse3DI GCAATG 2 cut(s) 24, 1289
BseBI CCWGG 2 cut(s) 48, 313
BseCI ATCGAT 2 cut(s) 451, 1130
BseDI CCNNGG 3 cut(s) 66, 176, 1077
BseGI GGATG 4 cut(s) 665, 712, 1031, 1150
BseLI CCNNNNNNNGG 2 cut(s) 70, 851
BseMI GCAATG 2 cut(s) 24, 1289
BseMII CTCAG 5 cut(s) 342, 472, 711, 780, 1152
BseNI ACTGG 3 cut(s) 338, 361, 1160
BseRI GAGGAG 2 cut(s) 38, 812
BseSI GKGCMC 2 cut(s) 126, 414
BseXI GCAGC 2 cut(s) 16, 728
Bsh1285I CGRYCG 1 cut(s) 166
BshFI GGCC 4 cut(s) 194, 843, 1046, 1159
BshNI GGYRCC 2 cut(s) 121, 308
BshVI ATCGAT 2 cut(s) 451, 1130
BsiEI CGRYCG 1 cut(s) 166
BsiHKAI GWGCWC 1 cut(s) 414
BsiSI CCGG 3 cut(s) 126, 292, 1025
BslFI GGGAC 1 cut(s) 822
BslI CCNNNNNNNGG 2 cut(s) 70, 851
BsmAI GTCTC 3 cut(s) 347, 456, 725
BsmFI GGGAC 1 cut(s) 822
BsmI GAATGC 1 cut(s) 710
BsnI GGCC 4 cut(s) 194, 843, 1046, 1159
Bsp1286I GDGCHC 2 cut(s) 126, 414
Bsp143I GATC 7 cut(s) 426, 448, 452, 531, 859, 1127, 1236
Bsp19I CCATGG 2 cut(s) 66, 1077
BspACI CCGC 3 cut(s) 111, 986, 1043
BspANI GGCC 4 cut(s) 194, 843, 1046, 1159
BspCNI CTCAG 5 cut(s) 341, 471, 712, 779, 1153
BspDI ATCGAT 2 cut(s) 451, 1130
BspLI GGNNCC 2 cut(s) 123, 310
BspMI ACCTGC 1 cut(s) 954
BspPI GGATC 3 cut(s) 434, 867, 1135
BspQI GCTCTTC 1 cut(s) 1182
BspT107I GGYRCC 2 cut(s) 121, 308
BspTI CTTAAG 1 cut(s) 95
BsrBI CCGCTC 1 cut(s) 111
BsrDI GCAATG 2 cut(s) 24, 1289
BsrI ACTGG 3 cut(s) 338, 361, 1160
BssECI CCNNGG 3 cut(s) 66, 176, 1077
BssMI GATC 7 cut(s) 426, 448, 452, 531, 859, 1127, 1236
BssT1I CCWWGG 3 cut(s) 66, 176, 1077
Bst2UI CCWGG 2 cut(s) 48, 313
Bst4CI ACNGT 4 cut(s) 164, 298, 419, 819
Bst6I CTCTTC 8 cut(s) 92, 536, 552, 558, 618, 696, 723, 1182
BstAFI CTTAAG 1 cut(s) 95
BstC8I GCNNGC 1 cut(s) 335
BstDEI CTNAG 5 cut(s) 328, 458, 720, 766, 1161
BstDSI CCRYGG 2 cut(s) 66, 1077
BstF5I GGATG 4 cut(s) 665, 712, 1031, 1150
BstKTI GATC 7 cut(s) 429, 451, 455, 534, 862, 1130, 1239
BstMAI GTCTC 3 cut(s) 347, 456, 725
BstMBI GATC 7 cut(s) 426, 448, 452, 531, 859, 1127, 1236
BstMCI CGRYCG 1 cut(s) 166
BstMWI GCNNNNNNNGC 2 cut(s) 135, 716
BstNI CCWGG 2 cut(s) 48, 313
BstSCI CCNGG 3 cut(s) 46, 124, 311
BstSLI GKGCMC 2 cut(s) 126, 414
BstV1I GCAGC 2 cut(s) 16, 728
BstV2I GAAGAC 2 cut(s) 214, 1263
BstX2I RGATCY 1 cut(s) 426
BstYI RGATCY 1 cut(s) 426
Bsu15I ATCGAT 2 cut(s) 451, 1130
BsuRI GGCC 4 cut(s) 194, 843, 1046, 1159
BsuTUI ATCGAT 2 cut(s) 451, 1130
BtgI CCRYGG 2 cut(s) 66, 1077
BtsCI GGATG 4 cut(s) 665, 712, 1031, 1150
BtsIMutI CAGTG 1 cut(s) 1056
BveI ACCTGC 1 cut(s) 954
Cac8I GCNNGC 1 cut(s) 335
CaiI CAGNNNCTG 1 cut(s) 773
Cfr13I GGNCC 3 cut(s) 294, 842, 1177
ClaI ATCGAT 2 cut(s) 451, 1130
CpoI CGGWCCG 1 cut(s) 294
Csp6I GTAC 2 cut(s) 686, 1153
CspCI CAANNNNNGTGG 2 cut(s) 1102, 1137
CspI CGGWCCG 1 cut(s) 294
CviAII CATG 5 cut(s) 67, 434, 741, 863, 1078
CviQI GTAC 2 cut(s) 686, 1153
DdeI CTNAG 5 cut(s) 328, 458, 720, 766, 1161
DpnI GATC 7 cut(s) 428, 450, 454, 533, 861, 1129, 1238
DpnII GATC 7 cut(s) 426, 448, 452, 531, 859, 1127, 1236
Eam1104I CTCTTC 8 cut(s) 92, 536, 552, 558, 618, 696, 723, 1182
EarI CTCTTC 8 cut(s) 92, 536, 552, 558, 618, 696, 723, 1182
EciI GGCGGA 1 cut(s) 1001
Eco130I CCWWGG 3 cut(s) 66, 176, 1077
Eco147I AGGCCT 1 cut(s) 194
Eco47I GGWCC 2 cut(s) 294, 1177
Eco57I CTGAAG 2 cut(s) 795, 1206
EcoO109I RGGNCCY 2 cut(s) 842, 1177
EcoRII CCWGG 2 cut(s) 46, 311
EcoT14I CCWWGG 3 cut(s) 66, 176, 1077
EcoT22I ATGCAT 1 cut(s) 712
ErhI CCWWGG 3 cut(s) 66, 176, 1077
FaeI CATG 5 cut(s) 70, 437, 744, 866, 1081
FalI AAGNNNNNCTT 8 cut(s) 89, 121, 373, 405, 555, 587, 615, 647
FaqI GGGAC 1 cut(s) 822
FatI CATG 5 cut(s) 66, 433, 740, 862, 1077
Fnu4HI GCNGC 3 cut(s) 5, 717, 1044
FokI GGATG 4 cut(s) 652, 719, 1018, 1157
Fsp4HI GCNGC 3 cut(s) 5, 717, 1044
FspBI CTAG 3 cut(s) 683, 950, 969
GluI GCNGC 3 cut(s) 5, 717, 1044
GsuI CTGGAG 1 cut(s) 69
HaeIII GGCC 4 cut(s) 194, 843, 1046, 1159
HapII CCGG 3 cut(s) 126, 292, 1025
Hin1II CATG 5 cut(s) 70, 437, 744, 866, 1081
HinfI GANTC 6 cut(s) 278, 326, 810, 1097, 1163, 1232
HpaII CCGG 3 cut(s) 126, 292, 1025
HphI GGTGA 4 cut(s) 241, 490, 527, 806
Hpy166II GTNNAC 2 cut(s) 412, 518
Hpy188I TCNGA 5 cut(s) 461, 700, 769, 829, 1222
Hpy188III TCNNGA 4 cut(s) 106, 572, 1142, 1250
Hpy8I GTNNAC 2 cut(s) 412, 518
Hpy99I CGWCG 1 cut(s) 326
HpyAV CCTTC 4 cut(s) 112, 310, 855, 1022
HpyCH4III ACNGT 4 cut(s) 164, 298, 419, 819
HpyCH4IV ACGT 2 cut(s) 553, 660
HpyF10VI GCNNNNNNNGC 2 cut(s) 135, 716
HpyF3I CTNAG 5 cut(s) 328, 458, 720, 766, 1161
HpySE526I ACGT 2 cut(s) 553, 660
Hsp92II CATG 5 cut(s) 70, 437, 744, 866, 1081
Kzo9I GATC 7 cut(s) 426, 448, 452, 531, 859, 1127, 1236
LguI GCTCTTC 1 cut(s) 1182
LmnI GCTCC 1 cut(s) 616
Lsp1109I GCAGC 2 cut(s) 16, 728
LweI GCATC 3 cut(s) 413, 697, 1037
MaeI CTAG 3 cut(s) 683, 950, 969
MaeII ACGT 2 cut(s) 553, 660
MalI GATC 7 cut(s) 428, 450, 454, 533, 861, 1129, 1238
MbiI CCGCTC 1 cut(s) 111
MboI GATC 7 cut(s) 426, 448, 452, 531, 859, 1127, 1236
MfeI CAATTG 1 cut(s) 780
MflI RGATCY 1 cut(s) 426
MhlI GDGCHC 2 cut(s) 126, 414
MluCI AATT 4 cut(s) 77, 580, 780, 802
MlyI GAGTC 5 cut(s) 272, 320, 804, 1172, 1241
MmeI TCCRAC 4 cut(s) 280, 404, 838, 1209
Mph1103I ATGCAT 1 cut(s) 712
MroXI GAANNNNTTC 3 cut(s) 81, 567, 894
MseI TTAA 2 cut(s) 96, 957
MslI CAYNNNNRTG 1 cut(s) 1061
MspA1I CMGCKG 2 cut(s) 719, 1103
MspCI CTTAAG 1 cut(s) 95
MspI CCGG 3 cut(s) 126, 292, 1025
MspR9I CCNGG 3 cut(s) 48, 126, 313
MunI CAATTG 1 cut(s) 780
Mva1269I GAATGC 1 cut(s) 710
MvaI CCWGG 2 cut(s) 48, 313
MwoI GCNNNNNNNGC 2 cut(s) 135, 716
NciI CCSGG 1 cut(s) 126
NcoI CCATGG 2 cut(s) 66, 1077
NdeII GATC 7 cut(s) 426, 448, 452, 531, 859, 1127, 1236
NlaIII CATG 5 cut(s) 70, 437, 744, 866, 1081
NlaIV GGNNCC 2 cut(s) 123, 310
NsiI ATGCAT 1 cut(s) 712
PaqCI CACCTGC 1 cut(s) 954
PceI AGGCCT 1 cut(s) 194
PciSI GCTCTTC 1 cut(s) 1182
PctI GAATGC 1 cut(s) 710
PdmI GAANNNNTTC 3 cut(s) 81, 567, 894
PfeI GAWTC 1 cut(s) 1097
PfoI TCCNGGA 1 cut(s) 46
PkrI GCNGC 3 cut(s) 6, 718, 1045
PleI GAGTC 5 cut(s) 272, 320, 804, 1171, 1240
PpsI GAGTC 5 cut(s) 272, 320, 804, 1171, 1240
PpuMI RGGWCCY 1 cut(s) 1177
Psp1406I AACGTT 1 cut(s) 660
Psp5II RGGWCCY 1 cut(s) 1177
Psp6I CCWGG 2 cut(s) 46, 311
PspGI CCWGG 2 cut(s) 46, 311
PspN4I GGNNCC 2 cut(s) 123, 310
PspPI GGNCC 3 cut(s) 294, 842, 1177
PspPPI RGGWCCY 1 cut(s) 1177
PstNI CAGNNNCTG 1 cut(s) 773
PsuI RGATCY 1 cut(s) 426
PvuII CAGCTG 2 cut(s) 719, 1103
RsaI GTAC 2 cut(s) 687, 1154
RsaNI GTAC 2 cut(s) 686, 1153
RseI CAYNNNNRTG 1 cut(s) 1061
Rsr2I CGGWCCG 1 cut(s) 294
RsrII CGGWCCG 1 cut(s) 294
SapI GCTCTTC 1 cut(s) 1182
SaqAI TTAA 2 cut(s) 96, 957
SatI GCNGC 3 cut(s) 5, 717, 1044
Sau3AI GATC 7 cut(s) 426, 448, 452, 531, 859, 1127, 1236
Sau96I GGNCC 3 cut(s) 294, 842, 1177
SchI GAGTC 5 cut(s) 272, 320, 804, 1172, 1241
ScrFI CCNGG 3 cut(s) 48, 126, 313
SduI GDGCHC 2 cut(s) 126, 414
SfaNI GCATC 3 cut(s) 413, 697, 1037
SinI GGWCC 2 cut(s) 294, 1177
SmiMI CAYNNNNRTG 1 cut(s) 1061
SmlI CTYRAG 4 cut(s) 95, 106, 220, 632
SmoI CTYRAG 4 cut(s) 95, 106, 220, 632
SpeI ACTAGT 2 cut(s) 682, 968
Sse9I AATT 4 cut(s) 77, 580, 780, 802
SseBI AGGCCT 1 cut(s) 194
SsiI CCGC 3 cut(s) 111, 986, 1043
SspI AATATT 1 cut(s) 870
SspMI CTAG 3 cut(s) 683, 950, 969
StuI AGGCCT 1 cut(s) 194
StyD4I CCNGG 3 cut(s) 46, 124, 311
StyI CCWWGG 3 cut(s) 66, 176, 1077
TaaI ACNGT 4 cut(s) 164, 298, 419, 819
TaiI ACGT 2 cut(s) 556, 663
TaqI TCGA 5 cut(s) 147, 451, 534, 1130, 1235
TasI AATT 4 cut(s) 77, 580, 780, 802
TauI GCSGC 1 cut(s) 1046
TfiI GAWTC 1 cut(s) 1097
Tru1I TTAA 2 cut(s) 96, 957
Tru9I TTAA 2 cut(s) 96, 957
TscAI CASTG 1 cut(s) 1063
TseI GCWGC 2 cut(s) 4, 716
TspDTI ATGAA 1 cut(s) 837
TspRI CASTG 1 cut(s) 1063
Vha464I CTTAAG 1 cut(s) 95
VneI GTGCAC 1 cut(s) 410
VpaK11BI GGWCC 2 cut(s) 294, 1177
XmnI GAANNNNTTC 3 cut(s) 81, 567, 894
XspI CTAG 3 cut(s) 683, 950, 969
Zsp2I ATGCAT 1 cut(s) 712
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.