Rroxscaffold_2G00095300
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000076
Physical Location & Seq
Forward (+)
16689292 .. 16690584
1293 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00095300.1

Sequence Viewer

Length: 1293 bp
ATGCAGCAACAGTTTGCAATGGAGGAGAGCAGAGGCAATCAACTCCCAGGCGAGAGGTTCTGCCCCATGGAGGACGAACTAGTTCTCTTCTACCTCAAGCCCATGTTGAACGGACAGAAGGTGCCCGGCAGAAACCGCGTGGTATTCGACTGCGACCTGTACGGTCACCAAGAACCTTGGGAGATATGGGACGCCTACAAGACCAGAAGACCAAACGACTTGAGGCTCAACAAGGACATCTACTTCTTAACCCAACACAAGAAGATGAGTTCCACAGACAAGCGCGTACGCCGTACTGTTGGAAATGGCACCTGGAAGGGCGATGACTCCGGCAAGCCAGTAAAATCTTTGGAGACTGGTTGTGTGGTTGGCTTGAAGAAAAGATTTACTTACAAGAACGAAGCATCGGTGCACAACGGTTGTTGGATCTTGTATGAGTTCTACCTTGATCGATCACTCAGAGACAAGAAACAAAAGGTGAAAGACTATGTTCTTTGTCTACTACGAAAAAATGGTGAACCCCAAACCAAGATCGAAAAGAAGAGAAAGCAACGTGAAGAGGAAGAGGTTCTTGAACACAATTATGCTTATAATGATGGAGAAAACTTTAGGGAGCAAGCAGAGTTTCTTGAGCCACAAGCGAAGCGACAACAAACTGTACCACCCATTGATAATGCAACAGTACCAATGCCATCAGAAGATGATGCATTCGCAGATAAACTAGAAAGGTTATTGCTGTGCTCTGAAGATGATAATGTACCCTCAAGGGCTGAAGTAATTGGATTTCAAGGTGAGGAGAATGGAGAACTGCAACAATTAGCTTCCGAGGTGCAATCATGCCCTTCATTTGGAGACTATCATGGAATATTTAATCCACTACCAGAGGAAGATTTTCTCTTGGAGGAAATGGTAGAAGAAATGGGTATGGTAGAAATGGAAGACCTGCTAGTTGTTAATGGTGCGACTAGTAATATGGATGTGGCGGAAGAAAACGTGCTAAACAGCTCCCTTCTTCACACTCCCACATCATCCATGTCTGCGGCCTATGATGGCACTGATATGCCATATTTATCCATGGAAAATGGTTGCACTGATCCAGCTGGAAGCAACAATATTTGTGGAGGATCGATTGGCTTTCAGGGTGGTGCATACTGGCCTGAGTCTTTAGTGGAGGTCCCAATTCAAGAGAAACAAAAGACAGCTGATGGAGATTGTTCAGATTGGTTGGACTCAATCAGTTTTAGTCCTGAGGAAAACAACTTCCTTTGGAGTGAAGTGCAATGGTGTTCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

430

Amino Acids

49.08

Weight (kDa)

4.64

Isoelectric Point (pI)

57.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 16 - 148 7.1e-22 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 591
Acc36I ACCTGC 1 cut(s) 951
AccB1I GGYRCC 2 cut(s) 121, 308
AccI GTMKAC 1 cut(s) 499
AccII CGCG 2 cut(s) 138, 285
AciI CCGC 3 cut(s) 136, 983, 1040
AclWI GGATC 3 cut(s) 434, 1088, 1132
AcuI CTGAAG 2 cut(s) 765, 792
AcyI GRCGYC 1 cut(s) 192
AfaI GTAC 6 cut(s) 161, 288, 295, 660, 684, 759
AfiI CCNNNNNNNGG 2 cut(s) 70, 848
AgsI TTSAA 5 cut(s) 109, 376, 575, 788, 1184
AhlI ACTAGT 2 cut(s) 79, 965
AjnI CCWGG 2 cut(s) 46, 311
AluBI AGCT 4 cut(s) 821, 1005, 1100, 1202
AluI AGCT 4 cut(s) 821, 1005, 1100, 1202
Alw21I GWGCWC 2 cut(s) 414, 743
Alw26I GTCTC 3 cut(s) 347, 456, 846
Alw44I GTGCAC 1 cut(s) 410
AlwI GGATC 3 cut(s) 434, 1088, 1132
AoxI GGCC 2 cut(s) 1041, 1154
ApaLI GTGCAC 1 cut(s) 410
ApeKI GCWGC 1 cut(s) 4
Asp700I GAANNNNTTC 3 cut(s) 81, 567, 891
AspLEI GCGC 1 cut(s) 285
AspS9I GGNCC 1 cut(s) 1174
AsuC2I CCSGG 1 cut(s) 126
AsuHPI GGTGA 4 cut(s) 158, 490, 527, 803
AvaII GGWCC 1 cut(s) 1174
AxyI CCTNAGG 1 cut(s) 1248
BaeGI GKGCMC 2 cut(s) 126, 414
BanI GGYRCC 2 cut(s) 121, 308
BbsI GAAGAC 2 cut(s) 214, 945
Bbv12I GWGCWC 2 cut(s) 414, 743
BbvI GCAGC 1 cut(s) 16
BccI CCATC 4 cut(s) 590, 700, 1043, 1199
BceAI ACGGC 1 cut(s) 276
BciT130I CCWGG 2 cut(s) 48, 313
BcnI CCSGG 1 cut(s) 126
BcoDI GTCTC 3 cut(s) 347, 456, 846
BcuI ACTAGT 2 cut(s) 79, 965
BfaI CTAG 4 cut(s) 80, 722, 947, 966
BfuAI ACCTGC 1 cut(s) 951
BisI GCNGC 2 cut(s) 5, 1041
BlsI GCNGC 2 cut(s) 6, 1042
Bme1390I CCNGG 3 cut(s) 48, 126, 313
Bme18I GGWCC 1 cut(s) 1174
BmgT120I GGNCC 1 cut(s) 1174
BmiI GGNNCC 3 cut(s) 123, 310, 1176
BmrFI CCNGG 3 cut(s) 48, 126, 313
BmsI GCATC 2 cut(s) 413, 694
BpiI GAAGAC 2 cut(s) 214, 945
BpuEI CTTGAG 4 cut(s) 80, 241, 650, 748
BpuMI CCSGG 1 cut(s) 126
Bsa29I ATCGAT 2 cut(s) 451, 1127
BsaHI GRCGYC 1 cut(s) 192
BsaJI CCNNGG 5 cut(s) 46, 66, 176, 825, 1074
Bsc4I CCNNNNNNNGG 2 cut(s) 70, 848
Bse1I ACTGG 3 cut(s) 338, 361, 1157
Bse21I CCTNAGG 1 cut(s) 1248
Bse3DI GCAATG 2 cut(s) 24, 1286
BseBI CCWGG 2 cut(s) 48, 313
BseCI ATCGAT 2 cut(s) 451, 1127
BseDI CCNNGG 5 cut(s) 46, 66, 176, 825, 1074
BseGI GGATG 2 cut(s) 982, 1028
BseLI CCNNNNNNNGG 2 cut(s) 70, 848
BseMI GCAATG 2 cut(s) 24, 1286
BseMII CTCAG 3 cut(s) 472, 1149, 1239
BseNI ACTGG 3 cut(s) 338, 361, 1157
BseRI GAGGAG 2 cut(s) 38, 809
BseSI GKGCMC 2 cut(s) 126, 414
BseXI GCAGC 1 cut(s) 16
Bsh1236I CGCG 2 cut(s) 138, 285
BshFI GGCC 2 cut(s) 1043, 1156
BshNI GGYRCC 2 cut(s) 121, 308
BshVI ATCGAT 2 cut(s) 451, 1127
BsiHKAI GWGCWC 2 cut(s) 414, 743
BsiSI CCGG 2 cut(s) 126, 330
BsiWI CGTACG 1 cut(s) 286
BslFI GGGAC 2 cut(s) 203, 1160
BslI CCNNNNNNNGG 2 cut(s) 70, 848
BsmAI GTCTC 3 cut(s) 347, 456, 846
BsmFI GGGAC 2 cut(s) 203, 1160
BsmI GAATGC 1 cut(s) 707
BsnI GGCC 2 cut(s) 1043, 1156
Bsp1286I GDGCHC 3 cut(s) 126, 414, 743
Bsp143I GATC 6 cut(s) 426, 448, 452, 531, 1093, 1124
Bsp19I CCATGG 2 cut(s) 66, 1074
BspACI CCGC 3 cut(s) 136, 983, 1040
BspANI GGCC 2 cut(s) 1043, 1156
BspCNI CTCAG 3 cut(s) 471, 1150, 1240
BspDI ATCGAT 2 cut(s) 451, 1127
BspFNI CGCG 2 cut(s) 138, 285
BspLI GGNNCC 3 cut(s) 123, 310, 1176
BspMI ACCTGC 1 cut(s) 951
BspPI GGATC 3 cut(s) 434, 1088, 1132
BspT107I GGYRCC 2 cut(s) 121, 308
BsrDI GCAATG 2 cut(s) 24, 1286
BsrI ACTGG 3 cut(s) 338, 361, 1157
BssECI CCNNGG 5 cut(s) 46, 66, 176, 825, 1074
BssMI GATC 6 cut(s) 426, 448, 452, 531, 1093, 1124
BssNI GRCGYC 1 cut(s) 192
BssT1I CCWWGG 3 cut(s) 66, 176, 1074
Bst2UI CCWGG 2 cut(s) 48, 313
Bst4CI ACNGT 6 cut(s) 12, 164, 298, 419, 658, 682
Bst6I CTCTTC 4 cut(s) 92, 536, 552, 558
BstACI GRCGYC 1 cut(s) 192
BstC8I GCNNGC 2 cut(s) 335, 618
BstDEI CTNAG 3 cut(s) 458, 1158, 1248
BstDSI CCRYGG 2 cut(s) 66, 1074
BstEII GGTNACC 1 cut(s) 164
BstF5I GGATG 2 cut(s) 982, 1028
BstFNI CGCG 2 cut(s) 138, 285
BstHHI GCGC 1 cut(s) 285
BstKTI GATC 6 cut(s) 429, 451, 455, 534, 1096, 1127
BstMAI GTCTC 3 cut(s) 347, 456, 846
BstMBI GATC 6 cut(s) 426, 448, 452, 531, 1093, 1124
BstMWI GCNNNNNNNGC 1 cut(s) 135
BstNI CCWGG 2 cut(s) 48, 313
BstPI GGTNACC 1 cut(s) 164
BstSCI CCNGG 3 cut(s) 46, 124, 311
BstSLI GKGCMC 2 cut(s) 126, 414
BstUI CGCG 2 cut(s) 138, 285
BstV1I GCAGC 1 cut(s) 16
BstV2I GAAGAC 2 cut(s) 214, 945
BstX2I RGATCY 1 cut(s) 426
BstYI RGATCY 1 cut(s) 426
Bsu15I ATCGAT 2 cut(s) 451, 1127
Bsu36I CCTNAGG 1 cut(s) 1248
BsuRI GGCC 2 cut(s) 1043, 1156
BsuTUI ATCGAT 2 cut(s) 451, 1127
BtgI CCRYGG 2 cut(s) 66, 1074
BtgZI GCGATG 1 cut(s) 336
BtsCI GGATG 2 cut(s) 982, 1028
BtsIMutI CAGTG 2 cut(s) 1053, 1089
BveI ACCTGC 1 cut(s) 951
Cac8I GCNNGC 2 cut(s) 335, 618
CfoI GCGC 1 cut(s) 285
Cfr13I GGNCC 1 cut(s) 1174
ClaI ATCGAT 2 cut(s) 451, 1127
CseI GACGC 1 cut(s) 200
Csp6I GTAC 6 cut(s) 160, 287, 294, 659, 683, 758
CspCI CAANNNNNGTGG 2 cut(s) 1099, 1134
CviAII CATG 6 cut(s) 67, 103, 837, 860, 1033, 1075
CviQI GTAC 6 cut(s) 160, 287, 294, 659, 683, 758
DdeI CTNAG 3 cut(s) 458, 1158, 1248
DpnI GATC 6 cut(s) 428, 450, 454, 533, 1095, 1126
DpnII GATC 6 cut(s) 426, 448, 452, 531, 1093, 1124
Eam1104I CTCTTC 4 cut(s) 92, 536, 552, 558
EarI CTCTTC 4 cut(s) 92, 536, 552, 558
EciI GGCGGA 1 cut(s) 998
Eco130I CCWWGG 3 cut(s) 66, 176, 1074
Eco47I GGWCC 1 cut(s) 1174
Eco57I CTGAAG 2 cut(s) 765, 792
Eco81I CCTNAGG 1 cut(s) 1248
Eco91I GGTNACC 1 cut(s) 164
EcoO109I RGGNCCY 1 cut(s) 1174
EcoO65I GGTNACC 1 cut(s) 164
EcoRII CCWGG 2 cut(s) 46, 311
EcoT14I CCWWGG 3 cut(s) 66, 176, 1074
EcoT22I ATGCAT 1 cut(s) 709
ErhI CCWWGG 3 cut(s) 66, 176, 1074
FaeI CATG 6 cut(s) 70, 106, 840, 863, 1036, 1078
FalI AAGNNNNNCTT 4 cut(s) 373, 405, 555, 587
FaqI GGGAC 2 cut(s) 203, 1160
FatI CATG 6 cut(s) 66, 102, 836, 859, 1032, 1074
FblI GTMKAC 1 cut(s) 499
Fnu4HI GCNGC 2 cut(s) 5, 1041
FokI GGATG 2 cut(s) 989, 1015
Fsp4HI GCNGC 2 cut(s) 5, 1041
FspBI CTAG 4 cut(s) 80, 722, 947, 966
GlaI GCGC 1 cut(s) 284
GluI GCNGC 2 cut(s) 5, 1041
HaeIII GGCC 2 cut(s) 1043, 1156
HapII CCGG 2 cut(s) 126, 330
HgaI GACGC 1 cut(s) 200
HhaI GCGC 1 cut(s) 285
Hin1I GRCGYC 1 cut(s) 192
Hin1II CATG 6 cut(s) 70, 106, 840, 863, 1036, 1078
Hin6I GCGC 1 cut(s) 283
HinP1I GCGC 1 cut(s) 283
HinfI GANTC 3 cut(s) 326, 1160, 1229
HpaII CCGG 2 cut(s) 126, 330
HphI GGTGA 4 cut(s) 158, 490, 527, 803
Hpy166II GTNNAC 3 cut(s) 412, 500, 518
Hpy188I TCNGA 5 cut(s) 461, 697, 745, 826, 1219
Hpy188III TCNNGA 4 cut(s) 572, 629, 1184, 1247
Hpy8I GTNNAC 3 cut(s) 412, 500, 518
HpyAV CCTTC 4 cut(s) 112, 310, 852, 1019
HpyCH4III ACNGT 6 cut(s) 12, 164, 298, 419, 658, 682
HpyCH4IV ACGT 2 cut(s) 553, 993
HpyF10VI GCNNNNNNNGC 1 cut(s) 135
HpyF3I CTNAG 3 cut(s) 458, 1158, 1248
HpySE526I ACGT 2 cut(s) 553, 993
Hsp92I GRCGYC 1 cut(s) 192
Hsp92II CATG 6 cut(s) 70, 106, 840, 863, 1036, 1078
HspAI GCGC 1 cut(s) 283
Kzo9I GATC 6 cut(s) 426, 448, 452, 531, 1093, 1124
LmnI GCTCC 2 cut(s) 613, 1010
Lsp1109I GCAGC 1 cut(s) 16
LweI GCATC 2 cut(s) 413, 694
MaeI CTAG 4 cut(s) 80, 722, 947, 966
MaeII ACGT 2 cut(s) 553, 993
MaeIII GTNAC 1 cut(s) 164
MalI GATC 6 cut(s) 428, 450, 454, 533, 1095, 1126
MboI GATC 6 cut(s) 426, 448, 452, 531, 1093, 1124
MflI RGATCY 1 cut(s) 426
MhlI GDGCHC 3 cut(s) 126, 414, 743
MluCI AATT 4 cut(s) 580, 777, 815, 1179
MlyI GAGTC 3 cut(s) 320, 1169, 1223
MmeI TCCRAC 3 cut(s) 280, 404, 1206
Mph1103I ATGCAT 1 cut(s) 709
MroXI GAANNNNTTC 3 cut(s) 81, 567, 891
MseI TTAA 3 cut(s) 248, 870, 954
MslI CAYNNNNRTG 2 cut(s) 582, 1058
MspA1I CMGCKG 2 cut(s) 1100, 1202
MspI CCGG 2 cut(s) 126, 330
MspR9I CCNGG 3 cut(s) 48, 126, 313
Mva1269I GAATGC 1 cut(s) 707
MvaI CCWGG 2 cut(s) 48, 313
MvnI CGCG 2 cut(s) 138, 285
MwoI GCNNNNNNNGC 1 cut(s) 135
NciI CCSGG 1 cut(s) 126
NcoI CCATGG 2 cut(s) 66, 1074
NdeII GATC 6 cut(s) 426, 448, 452, 531, 1093, 1124
NlaIII CATG 6 cut(s) 70, 106, 840, 863, 1036, 1078
NlaIV GGNNCC 3 cut(s) 123, 310, 1176
NmuCI GTSAC 1 cut(s) 164
NsiI ATGCAT 1 cut(s) 709
PctI GAATGC 1 cut(s) 707
PdmI GAANNNNTTC 3 cut(s) 81, 567, 891
Pfl23II CGTACG 1 cut(s) 286
PkrI GCNGC 2 cut(s) 6, 1042
PleI GAGTC 3 cut(s) 320, 1168, 1223
PpsI GAGTC 3 cut(s) 320, 1168, 1223
PpuMI RGGWCCY 1 cut(s) 1174
PsiI TTATAA 1 cut(s) 591
Psp5II RGGWCCY 1 cut(s) 1174
Psp6I CCWGG 2 cut(s) 46, 311
PspEI GGTNACC 1 cut(s) 164
PspGI CCWGG 2 cut(s) 46, 311
PspLI CGTACG 1 cut(s) 286
PspN4I GGNNCC 3 cut(s) 123, 310, 1176
PspPI GGNCC 1 cut(s) 1174
PspPPI RGGWCCY 1 cut(s) 1174
PsuI RGATCY 1 cut(s) 426
PvuII CAGCTG 2 cut(s) 1100, 1202
RsaI GTAC 6 cut(s) 161, 288, 295, 660, 684, 759
RsaNI GTAC 6 cut(s) 160, 287, 294, 659, 683, 758
RseI CAYNNNNRTG 2 cut(s) 582, 1058
SaqAI TTAA 3 cut(s) 248, 870, 954
SatI GCNGC 2 cut(s) 5, 1041
Sau3AI GATC 6 cut(s) 426, 448, 452, 531, 1093, 1124
Sau96I GGNCC 1 cut(s) 1174
SchI GAGTC 3 cut(s) 320, 1169, 1223
ScrFI CCNGG 3 cut(s) 48, 126, 313
SduI GDGCHC 3 cut(s) 126, 414, 743
SfaNI GCATC 2 cut(s) 413, 694
SinI GGWCC 1 cut(s) 1174
SmiMI CAYNNNNRTG 2 cut(s) 582, 1058
SmlI CTYRAG 4 cut(s) 95, 220, 629, 763
SmoI CTYRAG 4 cut(s) 95, 220, 629, 763
SpeI ACTAGT 2 cut(s) 79, 965
Sse9I AATT 4 cut(s) 580, 777, 815, 1179
SsiI CCGC 3 cut(s) 136, 983, 1040
SspI AATATT 2 cut(s) 867, 1114
SspMI CTAG 4 cut(s) 80, 722, 947, 966
StyD4I CCNGG 3 cut(s) 46, 124, 311
StyI CCWWGG 3 cut(s) 66, 176, 1074
TaaI ACNGT 6 cut(s) 12, 164, 298, 419, 658, 682
TaiI ACGT 2 cut(s) 556, 996
TaqI TCGA 4 cut(s) 147, 451, 534, 1127
TasI AATT 4 cut(s) 580, 777, 815, 1179
TauI GCSGC 1 cut(s) 1043
Tru1I TTAA 3 cut(s) 248, 870, 954
Tru9I TTAA 3 cut(s) 248, 870, 954
TscAI CASTG 2 cut(s) 1060, 1096
TseFI GTSAC 1 cut(s) 164
TseI GCWGC 1 cut(s) 4
Tsp45I GTSAC 1 cut(s) 164
TspDTI ATGAA 1 cut(s) 834
TspGWI ACGGA 1 cut(s) 126
TspRI CASTG 2 cut(s) 1060, 1096
VneI GTGCAC 1 cut(s) 410
VpaK11BI GGWCC 1 cut(s) 1174
XmiI GTMKAC 1 cut(s) 499
XmnI GAANNNNTTC 3 cut(s) 81, 567, 891
XspI CTAG 4 cut(s) 80, 722, 947, 966
Zsp2I ATGCAT 1 cut(s) 709
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.