Rmu_sc0020600.1_g000008
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0020600.1
OG0000076
Physical Location & Seq
Reverse (-)
32702 .. 34009
1308 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0020600.1_g000008.1.cds

Sequence Viewer

Length: 1308 bp
atgcagcaagagtttctaatggaggagagcagaggcaatcaacttcctggccagaggttctgccccatggacgatgaactagttctcttttacctcaagccgatgttgagcggacagaacgtgcccggcagaaaccgcgtggtgttcgactgcgacctctacggtcagcaagaaccttgggagatatgggagaccttcaagaccagaagaccacacgacttgaggctcaataaggacatttacttcttcacccaacacaagaagatgagttccacagacaagcgcgtacgccggaatgttggaagtggcacctggaagggggacgactccggcaagccagtacgatatgttgattctggttgtgttgttggcttgaagaaaagatatacttacaagaatgaagactcggtgcacaacggctgttggatcttgtacgagttctaccttgatcgatcactcagagacaagaaacaaaaggtgaaagactgtgttctttgtctactacgaaagaatggtgaacccaaaaccaagattgaaaagaagagaaagcaacgtgaagaggaacagtttcttgaaaacaattatgcctgtgatgatggagaaaactcgaatagggagcaagaagtgtcgcttgagccgcaagcgaagcgacaacgaaccgtgccatccattgataatgcaccaccaacaatgccatcagaagatgatgctgcattaattgcagctgaactagaagagtcattggaatgctctgaagatgataatgcaccctcatcagaagctgaagcagttggccttcaaggtgaggagaatggtggactccaaaaattagcatccgaggggcaatcatcagggccttcatttgtagactattatggaatatttaatccgctgccggaggaagattttctctgggaggaaatggtagaagaaatgggtacggtagagaaggaagaaccagttcttaatggtgtaagtagtaatatagatgtggctgaagataacgcggtaaacagcacccttctttatgctcccacatcatccatgtctgtggcctctgatggttgcactgatatgccatatttgtcggaaaattgttgcattgatccatctggaagcaataatgtttgtggtggatcgattggcttgcaggatgctgcatactggcttgagtctttggtagaggtcccaactgatgagcaacagaagacagctgatgaagattgttcagattggttggagtcaatgatcaattttagtcctgaggagaacaacttcctttggagtgaaatgcaatggtgttcgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

435

Amino Acids

49.4

Weight (kDa)

4.45

Isoelectric Point (pI)

66.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 308
AccBSI CCGCTC 1 cut(s) 111
AccI GTMKAC 2 cut(s) 499, 867
AccII CGCG 3 cut(s) 138, 285, 1007
AciI CCGC 5 cut(s) 111, 136, 638, 890, 1007
AclWI GGATC 3 cut(s) 434, 1100, 1144
AcoI YGGCCR 1 cut(s) 49
AcuI CTGAAG 3 cut(s) 774, 804, 1017
AfaI GTAC 4 cut(s) 288, 342, 434, 940
AfiI CCNNNNNNNGG 1 cut(s) 318
AgsI TTSAA 5 cut(s) 199, 376, 536, 575, 800
AhlI ACTAGT 1 cut(s) 79
AjnI CCWGG 2 cut(s) 46, 311
AluBI AGCT 3 cut(s) 725, 782, 1214
AluI AGCT 3 cut(s) 725, 782, 1214
Alw21I GWGCWC 1 cut(s) 414
Alw26I GTCTC 2 cut(s) 185, 456
Alw44I GTGCAC 1 cut(s) 410
AlwI GGATC 3 cut(s) 434, 1100, 1144
AlwNI CAGNNNCTG 1 cut(s) 782
AoxI GGCC 4 cut(s) 49, 793, 854, 1053
ApaLI GTGCAC 1 cut(s) 410
ApeKI GCWGC 5 cut(s) 4, 710, 722, 892, 1157
AseI ATTAAT 1 cut(s) 716
Asp700I GAANNNNTTC 5 cut(s) 81, 567, 906, 960, 1274
AspLEI GCGC 1 cut(s) 285
AspS9I GGNCC 2 cut(s) 854, 1186
AsuC2I CCSGG 1 cut(s) 126
AsuHPI GGTGA 4 cut(s) 241, 490, 527, 815
AvaII GGWCC 1 cut(s) 1186
AxyI CCTNAGG 1 cut(s) 1263
BaeGI GKGCMC 2 cut(s) 126, 414
BalI TGGCCA 1 cut(s) 51
BanI GGYRCC 1 cut(s) 308
BbsI GAAGAC 3 cut(s) 214, 408, 1214
Bbv12I GWGCWC 1 cut(s) 414
BbvI GCAGC 5 cut(s) 16, 697, 734, 879, 1144
BccI CCATC 5 cut(s) 590, 673, 703, 1055, 1117
BceAI ACGGC 1 cut(s) 433
BcgI CGANNNNNNTGC 2 cut(s) 1129, 1163
BciT130I CCWGG 2 cut(s) 48, 313
BclI TGATCA 1 cut(s) 1248
BcnI CCSGG 1 cut(s) 126
BcoDI GTCTC 2 cut(s) 185, 456
BcuI ACTAGT 1 cut(s) 79
BfaI CTAG 2 cut(s) 80, 731
BisI GCNGC 6 cut(s) 5, 638, 711, 723, 893, 1158
BlsI GCNGC 6 cut(s) 6, 639, 712, 724, 894, 1159
Bme1390I CCNGG 3 cut(s) 48, 126, 313
Bme18I GGWCC 1 cut(s) 1186
BmgT120I GGNCC 2 cut(s) 854, 1186
BmiI GGNNCC 2 cut(s) 310, 1188
BmrFI CCNGG 3 cut(s) 48, 126, 313
BmsI GCATC 3 cut(s) 697, 842, 1144
BpiI GAAGAC 3 cut(s) 214, 408, 1214
BpuEI CTTGAG 4 cut(s) 80, 241, 653, 1190
BpuMI CCSGG 1 cut(s) 126
Bsa29I ATCGAT 2 cut(s) 451, 1139
BsaI GGTCTC 1 cut(s) 185
BsaJI CCNNGG 3 cut(s) 66, 176, 837
Bsc4I CCNNNNNNNGG 1 cut(s) 318
Bse1I ACTGG 3 cut(s) 338, 959, 1169
Bse21I CCTNAGG 1 cut(s) 1263
Bse3DI GCAATG 1 cut(s) 1301
BseBI CCWGG 2 cut(s) 48, 313
BseCI ATCGAT 2 cut(s) 451, 1139
BseDI CCNNGG 3 cut(s) 66, 176, 837
BseGI GGATG 4 cut(s) 665, 833, 1040, 1159
BseLI CCNNNNNNNGG 1 cut(s) 318
BseMI GCAATG 1 cut(s) 1301
BseMII CTCAG 2 cut(s) 472, 1254
BseNI ACTGG 3 cut(s) 338, 959, 1169
BseRI GAGGAG 3 cut(s) 38, 821, 1280
BseSI GKGCMC 2 cut(s) 126, 414
BseXI GCAGC 5 cut(s) 16, 697, 734, 879, 1144
Bsh1236I CGCG 3 cut(s) 138, 285, 1007
BshFI GGCC 4 cut(s) 51, 795, 856, 1055
BshNI GGYRCC 1 cut(s) 308
BshVI ATCGAT 2 cut(s) 451, 1139
BsiHKAI GWGCWC 1 cut(s) 414
BsiSI CCGG 4 cut(s) 126, 292, 330, 896
BsiWI CGTACG 1 cut(s) 286
BslFI GGGAC 2 cut(s) 335, 1172
BslI CCNNNNNNNGG 1 cut(s) 318
BsmAI GTCTC 2 cut(s) 185, 456
BsmFI GGGAC 2 cut(s) 335, 1172
BsmI GAATGC 1 cut(s) 752
BsnI GGCC 4 cut(s) 51, 795, 856, 1055
Bso31I GGTCTC 1 cut(s) 185
Bsp1286I GDGCHC 2 cut(s) 126, 414
Bsp143I GATC 6 cut(s) 426, 448, 452, 1105, 1136, 1248
Bsp19I CCATGG 1 cut(s) 66
BspACI CCGC 5 cut(s) 111, 136, 638, 890, 1007
BspANI GGCC 4 cut(s) 51, 795, 856, 1055
BspCNI CTCAG 2 cut(s) 471, 1255
BspDI ATCGAT 2 cut(s) 451, 1139
BspFNI CGCG 3 cut(s) 138, 285, 1007
BspLI GGNNCC 2 cut(s) 310, 1188
BspPI GGATC 3 cut(s) 434, 1100, 1144
BspT107I GGYRCC 1 cut(s) 308
BspTNI GGTCTC 1 cut(s) 185
BsrBI CCGCTC 1 cut(s) 111
BsrDI GCAATG 1 cut(s) 1301
BsrI ACTGG 3 cut(s) 338, 959, 1169
BssECI CCNNGG 3 cut(s) 66, 176, 837
BssMI GATC 6 cut(s) 426, 448, 452, 1105, 1136, 1248
BssT1I CCWWGG 2 cut(s) 66, 176
Bst2UI CCWGG 2 cut(s) 48, 313
Bst4CI ACNGT 5 cut(s) 164, 488, 567, 661, 943
Bst6I CTCTTC 3 cut(s) 536, 552, 729
BstAPI GCANNNNNTGC 1 cut(s) 719
BstC8I GCNNGC 3 cut(s) 335, 642, 1148
BstDEI CTNAG 2 cut(s) 458, 1263
BstDSI CCRYGG 1 cut(s) 66
BstF5I GGATG 4 cut(s) 665, 833, 1040, 1159
BstFNI CGCG 3 cut(s) 138, 285, 1007
BstHHI GCGC 1 cut(s) 285
BstKTI GATC 6 cut(s) 429, 451, 455, 1108, 1139, 1251
BstMAI GTCTC 2 cut(s) 185, 456
BstMBI GATC 6 cut(s) 426, 448, 452, 1105, 1136, 1248
BstMWI GCNNNNNNNGC 4 cut(s) 135, 637, 646, 719
BstNI CCWGG 2 cut(s) 48, 313
BstSCI CCNGG 3 cut(s) 46, 124, 311
BstSLI GKGCMC 2 cut(s) 126, 414
BstUI CGCG 3 cut(s) 138, 285, 1007
BstV1I GCAGC 5 cut(s) 16, 697, 734, 879, 1144
BstV2I GAAGAC 3 cut(s) 214, 408, 1214
BstX2I RGATCY 1 cut(s) 426
BstXI CCANNNNNNTGG 1 cut(s) 1051
BstYI RGATCY 1 cut(s) 426
Bsu15I ATCGAT 2 cut(s) 451, 1139
Bsu36I CCTNAGG 1 cut(s) 1263
BsuRI GGCC 4 cut(s) 51, 795, 856, 1055
BsuTUI ATCGAT 2 cut(s) 451, 1139
BtgI CCRYGG 1 cut(s) 66
BtsCI GGATG 4 cut(s) 665, 833, 1040, 1159
BtsIMutI CAGTG 1 cut(s) 1068
Cac8I GCNNGC 3 cut(s) 335, 642, 1148
CaiI CAGNNNCTG 1 cut(s) 782
CfoI GCGC 1 cut(s) 285
Cfr13I GGNCC 2 cut(s) 854, 1186
ClaI ATCGAT 2 cut(s) 451, 1139
Csp6I GTAC 4 cut(s) 287, 341, 433, 939
CspCI CAANNNNNGTGG 2 cut(s) 201, 236
CviAII CATG 2 cut(s) 67, 1045
CviQI GTAC 4 cut(s) 287, 341, 433, 939
DdeI CTNAG 2 cut(s) 458, 1263
DpnI GATC 6 cut(s) 428, 450, 454, 1107, 1138, 1250
DpnII GATC 6 cut(s) 426, 448, 452, 1105, 1136, 1248
EaeI YGGCCR 1 cut(s) 49
Eam1104I CTCTTC 3 cut(s) 536, 552, 729
EarI CTCTTC 3 cut(s) 536, 552, 729
Eco130I CCWWGG 2 cut(s) 66, 176
Eco31I GGTCTC 1 cut(s) 185
Eco47I GGWCC 1 cut(s) 1186
Eco57I CTGAAG 3 cut(s) 774, 804, 1017
Eco81I CCTNAGG 1 cut(s) 1263
EcoO109I RGGNCCY 2 cut(s) 854, 1186
EcoRII CCWGG 2 cut(s) 46, 311
EcoT14I CCWWGG 2 cut(s) 66, 176
ErhI CCWWGG 2 cut(s) 66, 176
FaeI CATG 2 cut(s) 70, 1048
FalI AAGNNNNNCTT 4 cut(s) 373, 405, 615, 647
FaqI GGGAC 2 cut(s) 335, 1172
FatI CATG 2 cut(s) 66, 1044
FbaI TGATCA 1 cut(s) 1248
FblI GTMKAC 2 cut(s) 499, 867
Fnu4HI GCNGC 6 cut(s) 5, 638, 711, 723, 893, 1158
FokI GGATG 4 cut(s) 652, 820, 1027, 1166
Fsp4HI GCNGC 6 cut(s) 5, 638, 711, 723, 893, 1158
FspBI CTAG 2 cut(s) 80, 731
GlaI GCGC 1 cut(s) 284
GluI GCNGC 6 cut(s) 5, 638, 711, 723, 893, 1158
HaeIII GGCC 4 cut(s) 51, 795, 856, 1055
HapII CCGG 4 cut(s) 126, 292, 330, 896
HhaI GCGC 1 cut(s) 285
Hin1II CATG 2 cut(s) 70, 1048
Hin6I GCGC 1 cut(s) 283
HinP1I GCGC 1 cut(s) 283
HinfI GANTC 7 cut(s) 326, 353, 404, 737, 819, 1172, 1241
HpaII CCGG 4 cut(s) 126, 292, 330, 896
HphI GGTGA 4 cut(s) 241, 490, 527, 815
Hpy166II GTNNAC 6 cut(s) 412, 500, 518, 818, 868, 1012
Hpy188I TCNGA 8 cut(s) 461, 700, 754, 778, 838, 1060, 1090, 1231
Hpy188III TCNNGA 4 cut(s) 199, 572, 1113, 1262
Hpy8I GTNNAC 6 cut(s) 412, 500, 518, 818, 868, 1012
HpyAV CCTTC 6 cut(s) 205, 310, 806, 867, 943, 1031
HpyCH4III ACNGT 5 cut(s) 164, 488, 567, 661, 943
HpyCH4IV ACGT 2 cut(s) 120, 553
HpyF10VI GCNNNNNNNGC 4 cut(s) 135, 637, 646, 719
HpyF3I CTNAG 2 cut(s) 458, 1263
HpySE526I ACGT 2 cut(s) 120, 553
Hsp92II CATG 2 cut(s) 70, 1048
HspAI GCGC 1 cut(s) 283
Ksp22I TGATCA 1 cut(s) 1248
Kzo9I GATC 6 cut(s) 426, 448, 452, 1105, 1136, 1248
LmnI GCTCC 2 cut(s) 616, 1036
Lsp1109I GCAGC 5 cut(s) 16, 697, 734, 879, 1144
LweI GCATC 3 cut(s) 697, 842, 1144
MaeI CTAG 2 cut(s) 80, 731
MaeII ACGT 2 cut(s) 120, 553
MalI GATC 6 cut(s) 428, 450, 454, 1107, 1138, 1250
MbiI CCGCTC 1 cut(s) 111
MboI GATC 6 cut(s) 426, 448, 452, 1105, 1136, 1248
MflI RGATCY 1 cut(s) 426
MhlI GDGCHC 2 cut(s) 126, 414
MlsI TGGCCA 1 cut(s) 51
MluCI AATT 5 cut(s) 580, 717, 827, 1093, 1252
MluNI TGGCCA 1 cut(s) 51
MlyI GAGTC 6 cut(s) 320, 398, 746, 813, 1181, 1250
MmeI TCCRAC 4 cut(s) 280, 404, 1068, 1218
Mox20I TGGCCA 1 cut(s) 51
MroXI GAANNNNTTC 5 cut(s) 81, 567, 906, 960, 1274
MscI TGGCCA 1 cut(s) 51
MseI TTAA 3 cut(s) 716, 885, 966
MslI CAYNNNNRTG 3 cut(s) 745, 1049, 1073
Msp20I TGGCCA 1 cut(s) 51
MspA1I CMGCKG 3 cut(s) 725, 892, 1214
MspI CCGG 4 cut(s) 126, 292, 330, 896
MspR9I CCNGG 3 cut(s) 48, 126, 313
Mva1269I GAATGC 1 cut(s) 752
MvaI CCWGG 2 cut(s) 48, 313
MvnI CGCG 3 cut(s) 138, 285, 1007
MwoI GCNNNNNNNGC 4 cut(s) 135, 637, 646, 719
NciI CCSGG 1 cut(s) 126
NcoI CCATGG 1 cut(s) 66
NdeII GATC 6 cut(s) 426, 448, 452, 1105, 1136, 1248
NlaIII CATG 2 cut(s) 70, 1048
NlaIV GGNNCC 2 cut(s) 310, 1188
PctI GAATGC 1 cut(s) 752
PdmI GAANNNNTTC 5 cut(s) 81, 567, 906, 960, 1274
PfeI GAWTC 1 cut(s) 353
Pfl23II CGTACG 1 cut(s) 286
PkrI GCNGC 6 cut(s) 6, 639, 712, 724, 894, 1159
PleI GAGTC 6 cut(s) 320, 398, 745, 813, 1180, 1249
PpsI GAGTC 6 cut(s) 320, 398, 745, 813, 1180, 1249
PpuMI RGGWCCY 1 cut(s) 1186
PshBI ATTAAT 1 cut(s) 716
Psp5II RGGWCCY 1 cut(s) 1186
Psp6I CCWGG 2 cut(s) 46, 311
PspGI CCWGG 2 cut(s) 46, 311
PspLI CGTACG 1 cut(s) 286
PspN4I GGNNCC 2 cut(s) 310, 1188
PspPI GGNCC 2 cut(s) 854, 1186
PspPPI RGGWCCY 1 cut(s) 1186
PstNI CAGNNNCTG 1 cut(s) 782
PsuI RGATCY 1 cut(s) 426
PvuII CAGCTG 2 cut(s) 725, 1214
RsaI GTAC 4 cut(s) 288, 342, 434, 940
RsaNI GTAC 4 cut(s) 287, 341, 433, 939
RseI CAYNNNNRTG 3 cut(s) 745, 1049, 1073
SaqAI TTAA 3 cut(s) 716, 885, 966
SatI GCNGC 6 cut(s) 5, 638, 711, 723, 893, 1158
Sau3AI GATC 6 cut(s) 426, 448, 452, 1105, 1136, 1248
Sau96I GGNCC 2 cut(s) 854, 1186
SchI GAGTC 6 cut(s) 320, 398, 746, 813, 1181, 1250
ScrFI CCNGG 3 cut(s) 48, 126, 313
SduI GDGCHC 2 cut(s) 126, 414
SfaNI GCATC 3 cut(s) 697, 842, 1144
SinI GGWCC 1 cut(s) 1186
SmiMI CAYNNNNRTG 3 cut(s) 745, 1049, 1073
SmlI CTYRAG 4 cut(s) 95, 220, 632, 1169
SmoI CTYRAG 4 cut(s) 95, 220, 632, 1169
SpeI ACTAGT 1 cut(s) 79
Sse9I AATT 5 cut(s) 580, 717, 827, 1093, 1252
SsiI CCGC 5 cut(s) 111, 136, 638, 890, 1007
SspI AATATT 1 cut(s) 882
SspMI CTAG 2 cut(s) 80, 731
StyD4I CCNGG 3 cut(s) 46, 124, 311
StyI CCWWGG 2 cut(s) 66, 176
TaaI ACNGT 5 cut(s) 164, 488, 567, 661, 943
TaiI ACGT 2 cut(s) 123, 556
TaqI TCGA 4 cut(s) 147, 451, 608, 1139
TasI AATT 5 cut(s) 580, 717, 827, 1093, 1252
TauI GCSGC 1 cut(s) 640
TfiI GAWTC 1 cut(s) 353
Tru1I TTAA 3 cut(s) 716, 885, 966
Tru9I TTAA 3 cut(s) 716, 885, 966
TscAI CASTG 1 cut(s) 1075
TseI GCWGC 5 cut(s) 4, 710, 722, 892, 1157
TspDTI ATGAA 4 cut(s) 90, 414, 849, 1233
TspRI CASTG 1 cut(s) 1075
VneI GTGCAC 1 cut(s) 410
VpaK11BI GGWCC 1 cut(s) 1186
VspI ATTAAT 1 cut(s) 716
XmiI GTMKAC 2 cut(s) 499, 867
XmnI GAANNNNTTC 5 cut(s) 81, 567, 906, 960, 1274
XspI CTAG 2 cut(s) 80, 731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.