FvH4_6g39190
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000076
Physical Location & Seq
Forward (+)
30992175 .. 30994047
1873 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g39190.t1

Sequence Viewer

Length: 1227 bp
ATGCAGCAAGCGTCTGCAATGGAGGAGATCAGAAACAATCAACTTCCTGGTATGAGGTTCTGCCCTATGGAGGACGAGCTTCTTCTTTCCTACCTCAAGCCGATGTTGAGTGGACAGAACGTGCCCGGCAGAAACAAGGTCGTCTTCGATTGCGATCTCTACGGTCAGCAAGAACCTTGGGAGATATGGGAGGCTTACAAGACCAAAAGACCAAACGACTTGAGGCTCCACAAGGACCTCTACTTCTTCACCCAACACAAGAAGATGAAATCCACAGACAAACGCATACGCCGCACCGTTGGAAGCGGCACATGGAAAGGAAACGACTCCGGGAACCCAGTAAAATCTTCCGGTCGTGAGATTGGTTTGAAGAAAAGATTTACCTACGAGAATAAAAAATCGAAGCACCACGGTTGTTGGATCCTGCATGAGTTCTACCTTGATCGATCACTCAGAGACAAGAAAGAGAAGGTGAAAGACTATGTTCTTTGTCTGCTACGAAAAAACGGTGATTCAAAAACCAAGATCGAAAAGAAGAGAAAGCAACGTGAAGAGGAAGACGTTCTTGATGCATGTGATGATGGAGAACAATCGAATACGGAGCAAGAAGTGCTTGAGACACAAGCGAAGCGACAACGAACCGTCTGTGTACCGCCAGTACCTACGCCATCAGAAGTTGATGCATTCATAGCTAAGATAGAAGGGTTTATGGAATGCGTTCAAGATGATAACTCACCTCCATCGGAAGCTGAAGCAATTGGTTTTCAAGGTGTGGAGGATGGGGGACTCCAACAATCAGCTTGTGAGGTGCAATCAGACCCTTCTTTTGTTCAACAAGATCCAGCCGGAAGCAACAATGATTGTGGAGGAGGAGGACTGATTGACTTTCATGATTTCTCACGTCCATCAGAAGCTGAAGCAATTGGCTTTCAAGGTGTGGAGGATGTGGGACTCCAACAATTAGCTTGTGAGGTGCAATCATCAGGCCCTTCTTTTGTTCCACTGCCGGAGGAAGATTTTGTCATGGAGCAATGCTTTGAAGAATTACGTAACTACGAAGAAACGGAAGAACAAGATCCAGCAGGGAGCAACAATGTTTGTGGAGGATTGATTGACCATAATGGTGATGATTGGATAAACTCAATCAGTTTTAGTCCTGAGGATAACGATTTCGTTTCATGCGAAATGCTAAGAAATTTCTTAGCTGACACTGCTGGGCTGCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

409

Amino Acids

46.08

Weight (kDa)

4.75

Isoelectric Point (pI)

67.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 16 - 146 5.3e-25 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 292, 306, 653
AclWI GGATC 4 cut(s) 415, 428, 833, 1070
AcsI RAATTY 1 cut(s) 1195
AcuI CTGAAG 2 cut(s) 771, 936
AfaI GTAC 2 cut(s) 651, 660
AfiI CCNNNNNNNGG 1 cut(s) 70
AgsI TTSAA 7 cut(s) 370, 516, 722, 767, 833, 932, 1040
AjiI CACGTC 1 cut(s) 902
AjnI CCWGG 1 cut(s) 46
AluBI AGCT 7 cut(s) 79, 692, 749, 800, 914, 965, 1205
AluI AGCT 7 cut(s) 79, 692, 749, 800, 914, 965, 1205
Alw26I GTCTC 2 cut(s) 450, 611
AlwI GGATC 4 cut(s) 415, 428, 833, 1070
AlwNI CAGNNNCTG 1 cut(s) 914
AoxI GGCC 1 cut(s) 985
ApeKI GCWGC 2 cut(s) 4, 1219
ApoI RAATTY 1 cut(s) 1195
ArsI GACNNNNNNTTYG 2 cut(s) 809, 841
Asp700I GAANNNNTTC 2 cut(s) 561, 717
AspS9I GGNCC 2 cut(s) 235, 986
AsuC2I CCSGG 2 cut(s) 126, 331
AsuHPI GGTGA 5 cut(s) 241, 484, 521, 726, 1136
AvaII GGWCC 1 cut(s) 235
AxyI CCTNAGG 1 cut(s) 1158
BaeGI GKGCMC 1 cut(s) 126
BamHI GGATCC 1 cut(s) 420
BbsI GAAGAC 2 cut(s) 136, 564
BbvI GCAGC 2 cut(s) 16, 1206
BccI CCATC 5 cut(s) 575, 676, 748, 773, 913
BciT130I CCWGG 1 cut(s) 48
BcnI CCSGG 2 cut(s) 126, 331
BcoDI GTCTC 2 cut(s) 450, 611
BisI GCNGC 4 cut(s) 5, 292, 307, 1220
BlsI GCNGC 4 cut(s) 6, 293, 308, 1221
Bme1390I CCNGG 3 cut(s) 48, 126, 331
Bme18I GGWCC 1 cut(s) 235
BmgBI CACGTC 1 cut(s) 902
BmgT120I GGNCC 2 cut(s) 235, 986
BmiI GGNNCC 3 cut(s) 227, 335, 422
BmrFI CCNGG 3 cut(s) 48, 126, 331
BmrI ACTGGG 1 cut(s) 332
BmsI GCATC 2 cut(s) 559, 670
BmuI ACTGGG 1 cut(s) 332
BpiI GAAGAC 2 cut(s) 136, 564
BpuEI CTTGAG 3 cut(s) 80, 241, 635
BpuMI CCSGG 2 cut(s) 126, 331
Bsa29I ATCGAT 1 cut(s) 445
BsaAI YACGTR 1 cut(s) 1049
BsaBI GATNNNNATC 1 cut(s) 153
BsaJI CCNNGG 2 cut(s) 176, 409
BsaWI WCCGGW 1 cut(s) 350
Bsc4I CCNNNNNNNGG 1 cut(s) 70
Bse1I ACTGG 2 cut(s) 338, 656
Bse21I CCTNAGG 1 cut(s) 1158
Bse3DI GCAATG 2 cut(s) 24, 1037
Bse8I GATNNNNATC 1 cut(s) 153
BseBI CCWGG 1 cut(s) 48
BseCI ATCGAT 1 cut(s) 445
BseDI CCNNGG 2 cut(s) 176, 409
BseGI GGATG 2 cut(s) 784, 949
BseJI GATNNNNATC 1 cut(s) 153
BseLI CCNNNNNNNGG 1 cut(s) 70
BseMI GCAATG 2 cut(s) 24, 1037
BseMII CTCAG 2 cut(s) 466, 1149
BseNI ACTGG 2 cut(s) 338, 656
BseRI GAGGAG 3 cut(s) 38, 882, 885
BseSI GKGCMC 1 cut(s) 126
BseXI GCAGC 2 cut(s) 16, 1206
BseYI CCCAGC 1 cut(s) 1214
Bsh1285I CGRYCG 1 cut(s) 355
BshFI GGCC 1 cut(s) 987
BshVI ATCGAT 1 cut(s) 445
BsiEI CGRYCG 1 cut(s) 355
BsiSI CCGG 5 cut(s) 126, 330, 351, 846, 1007
BslFI GGGAC 2 cut(s) 798, 963
BslI CCNNNNNNNGG 1 cut(s) 70
BsmAI GTCTC 2 cut(s) 450, 611
BsmFI GGGAC 2 cut(s) 798, 963
BsmI GAATGC 2 cut(s) 683, 719
BsnI GGCC 1 cut(s) 987
Bsp1286I GDGCHC 1 cut(s) 126
Bsp143I GATC 8 cut(s) 27, 154, 420, 442, 446, 525, 838, 1075
BspACI CCGC 3 cut(s) 292, 306, 653
BspANI GGCC 1 cut(s) 987
BspCNI CTCAG 2 cut(s) 465, 1150
BspDI ATCGAT 1 cut(s) 445
BspHI TCATGA 1 cut(s) 889
BspLI GGNNCC 3 cut(s) 227, 335, 422
BspPI GGATC 4 cut(s) 415, 428, 833, 1070
BsrDI GCAATG 2 cut(s) 24, 1037
BsrI ACTGG 2 cut(s) 338, 656
BssECI CCNNGG 2 cut(s) 176, 409
BssMI GATC 8 cut(s) 27, 154, 420, 442, 446, 525, 838, 1075
BssT1I CCWWGG 1 cut(s) 176
Bst2UI CCWGG 1 cut(s) 48
Bst4CI ACNGT 5 cut(s) 164, 298, 413, 509, 643
Bst6I CTCTTC 2 cut(s) 530, 546
BstAPI GCANNNNNTGC 1 cut(s) 610
BstBAI YACGTR 1 cut(s) 1049
BstC8I GCNNGC 1 cut(s) 9
BstDEI CTNAG 5 cut(s) 452, 693, 1158, 1190, 1201
BstDSI CCRYGG 1 cut(s) 409
BstF5I GGATG 2 cut(s) 784, 949
BstKTI GATC 8 cut(s) 30, 157, 423, 445, 449, 528, 841, 1078
BstMAI GTCTC 2 cut(s) 450, 611
BstMBI GATC 8 cut(s) 27, 154, 420, 442, 446, 525, 838, 1075
BstMCI CGRYCG 1 cut(s) 355
BstMWI GCNNNNNNNGC 4 cut(s) 291, 610, 689, 1211
BstNI CCWGG 1 cut(s) 48
BstNSI RCATGY 1 cut(s) 576
BstSCI CCNGG 3 cut(s) 46, 124, 329
BstSLI GKGCMC 1 cut(s) 126
BstSNI TACGTA 1 cut(s) 1049
BstV1I GCAGC 2 cut(s) 16, 1206
BstV2I GAAGAC 2 cut(s) 136, 564
BstX2I RGATCY 3 cut(s) 420, 838, 1075
BstYI RGATCY 3 cut(s) 420, 838, 1075
Bsu15I ATCGAT 1 cut(s) 445
Bsu36I CCTNAGG 1 cut(s) 1158
BsuRI GGCC 1 cut(s) 987
BsuTUI ATCGAT 1 cut(s) 445
BtgI CCRYGG 1 cut(s) 409
BtrI CACGTC 1 cut(s) 902
BtsCI GGATG 2 cut(s) 784, 949
BtsI GCAGTG 2 cut(s) 1001, 1209
BtsIMutI CAGTG 2 cut(s) 1001, 1209
Cac8I GCNNGC 1 cut(s) 9
CaiI CAGNNNCTG 1 cut(s) 914
CciI TCATGA 1 cut(s) 889
Cfr13I GGNCC 2 cut(s) 235, 986
ClaI ATCGAT 1 cut(s) 445
Csp6I GTAC 2 cut(s) 650, 659
CspCI CAANNNNNGTGG 6 cut(s) 398, 433, 844, 879, 1081, 1116
CviAII CATG 6 cut(s) 312, 428, 573, 890, 1024, 1179
CviQI GTAC 2 cut(s) 650, 659
DdeI CTNAG 5 cut(s) 452, 693, 1158, 1190, 1201
DpnI GATC 8 cut(s) 29, 156, 422, 444, 448, 527, 840, 1077
DpnII GATC 8 cut(s) 27, 154, 420, 442, 446, 525, 838, 1075
Eam1104I CTCTTC 2 cut(s) 530, 546
EarI CTCTTC 2 cut(s) 530, 546
Eco105I TACGTA 1 cut(s) 1049
Eco130I CCWWGG 1 cut(s) 176
Eco47I GGWCC 1 cut(s) 235
Eco57I CTGAAG 2 cut(s) 771, 936
Eco81I CCTNAGG 1 cut(s) 1158
EcoO109I RGGNCCY 2 cut(s) 235, 986
EcoRII CCWGG 1 cut(s) 46
EcoT14I CCWWGG 1 cut(s) 176
EcoT22I ATGCAT 2 cut(s) 574, 685
ErhI CCWWGG 1 cut(s) 176
FaeI CATG 6 cut(s) 315, 431, 576, 893, 1027, 1182
FalI AAGNNNNNCTT 6 cut(s) 128, 160, 549, 581, 597, 629
FaqI GGGAC 2 cut(s) 798, 963
FatI CATG 6 cut(s) 311, 427, 572, 889, 1023, 1178
Fnu4HI GCNGC 4 cut(s) 5, 292, 307, 1220
FokI GGATG 2 cut(s) 791, 956
Fsp4HI GCNGC 4 cut(s) 5, 292, 307, 1220
GluI GCNGC 4 cut(s) 5, 292, 307, 1220
GsaI CCCAGC 1 cut(s) 1218
HaeIII GGCC 1 cut(s) 987
HapII CCGG 5 cut(s) 126, 330, 351, 846, 1007
Hin1II CATG 6 cut(s) 315, 431, 576, 893, 1027, 1182
HinfI GANTC 4 cut(s) 326, 512, 786, 951
HpaII CCGG 5 cut(s) 126, 330, 351, 846, 1007
HphI GGTGA 5 cut(s) 241, 484, 521, 726, 1136
Hpy166II GTNNAC 2 cut(s) 113, 650
Hpy188I TCNGA 6 cut(s) 32, 455, 673, 745, 817, 910
Hpy188III TCNNGA 5 cut(s) 356, 566, 722, 890, 1157
Hpy8I GTNNAC 2 cut(s) 113, 650
HpyAV CCTTC 4 cut(s) 463, 695, 831, 999
HpyCH4III ACNGT 5 cut(s) 164, 298, 413, 509, 643
HpyCH4IV ACGT 5 cut(s) 120, 547, 561, 901, 1048
HpyCH4V TGCA 7 cut(s) 4, 17, 427, 572, 683, 811, 976
HpyF10VI GCNNNNNNNGC 4 cut(s) 291, 610, 689, 1211
HpyF3I CTNAG 5 cut(s) 452, 693, 1158, 1190, 1201
HpySE526I ACGT 5 cut(s) 120, 547, 561, 901, 1048
Hsp92II CATG 6 cut(s) 315, 431, 576, 893, 1027, 1182
Kzo9I GATC 8 cut(s) 27, 154, 420, 442, 446, 525, 838, 1075
LmnI GCTCC 4 cut(s) 231, 601, 1027, 1086
Lsp1109I GCAGC 2 cut(s) 16, 1206
LweI GCATC 2 cut(s) 559, 670
MaeII ACGT 5 cut(s) 120, 547, 561, 901, 1048
MaeIII GTNAC 1 cut(s) 1049
MalI GATC 8 cut(s) 29, 156, 422, 444, 448, 527, 840, 1077
MboI GATC 8 cut(s) 27, 154, 420, 442, 446, 525, 838, 1075
MfeI CAATTG 2 cut(s) 756, 921
MflI RGATCY 3 cut(s) 420, 838, 1075
MhlI GDGCHC 1 cut(s) 126
MluCI AATT 5 cut(s) 756, 921, 959, 1043, 1195
MlyI GAGTC 3 cut(s) 320, 780, 945
MmeI TCCRAC 4 cut(s) 280, 398, 814, 979
Mph1103I ATGCAT 2 cut(s) 574, 685
MroXI GAANNNNTTC 2 cut(s) 561, 717
MslI CAYNNNNRTG 1 cut(s) 1122
MspI CCGG 5 cut(s) 126, 330, 351, 846, 1007
MspR9I CCNGG 3 cut(s) 48, 126, 331
MunI CAATTG 2 cut(s) 756, 921
Mva1269I GAATGC 2 cut(s) 683, 719
MvaI CCWGG 1 cut(s) 48
MwoI GCNNNNNNNGC 4 cut(s) 291, 610, 689, 1211
NciI CCSGG 2 cut(s) 126, 331
NdeII GATC 8 cut(s) 27, 154, 420, 442, 446, 525, 838, 1075
NlaIII CATG 6 cut(s) 315, 431, 576, 893, 1027, 1182
NlaIV GGNNCC 3 cut(s) 227, 335, 422
NsiI ATGCAT 2 cut(s) 574, 685
NspI RCATGY 1 cut(s) 576
PagI TCATGA 1 cut(s) 889
PcsI WCGNNNNNNNCGW 1 cut(s) 1179
PctI GAATGC 2 cut(s) 683, 719
PdmI GAANNNNTTC 2 cut(s) 561, 717
PfeI GAWTC 1 cut(s) 512
PfoI TCCNGGA 1 cut(s) 329
PkrI GCNGC 4 cut(s) 6, 293, 308, 1221
PleI GAGTC 3 cut(s) 320, 780, 945
PpsI GAGTC 3 cut(s) 320, 780, 945
Ppu21I YACGTR 1 cut(s) 1049
PpuMI RGGWCCY 1 cut(s) 235
Psp5II RGGWCCY 1 cut(s) 235
Psp6I CCWGG 1 cut(s) 46
PspFI CCCAGC 1 cut(s) 1214
PspGI CCWGG 1 cut(s) 46
PspN4I GGNNCC 3 cut(s) 227, 335, 422
PspPI GGNCC 2 cut(s) 235, 986
PspPPI RGGWCCY 1 cut(s) 235
PstNI CAGNNNCTG 1 cut(s) 914
PsuI RGATCY 3 cut(s) 420, 838, 1075
RsaI GTAC 2 cut(s) 651, 660
RsaNI GTAC 2 cut(s) 650, 659
RseI CAYNNNNRTG 1 cut(s) 1122
SatI GCNGC 4 cut(s) 5, 292, 307, 1220
Sau3AI GATC 8 cut(s) 27, 154, 420, 442, 446, 525, 838, 1075
Sau96I GGNCC 2 cut(s) 235, 986
SchI GAGTC 3 cut(s) 320, 780, 945
ScrFI CCNGG 3 cut(s) 48, 126, 331
SduI GDGCHC 1 cut(s) 126
SfaNI GCATC 2 cut(s) 559, 670
SinI GGWCC 1 cut(s) 235
SmiMI CAYNNNNRTG 1 cut(s) 1122
SmlI CTYRAG 3 cut(s) 95, 220, 614
SmoI CTYRAG 3 cut(s) 95, 220, 614
SnaBI TACGTA 1 cut(s) 1049
Sse9I AATT 5 cut(s) 756, 921, 959, 1043, 1195
SsiI CCGC 3 cut(s) 292, 306, 653
StyD4I CCNGG 3 cut(s) 46, 124, 329
StyI CCWWGG 1 cut(s) 176
TaaI ACNGT 5 cut(s) 164, 298, 413, 509, 643
TaiI ACGT 5 cut(s) 123, 550, 564, 904, 1051
TaqI TCGA 5 cut(s) 147, 401, 445, 528, 593
TasI AATT 5 cut(s) 756, 921, 959, 1043, 1195
TauI GCSGC 2 cut(s) 294, 309
TfiI GAWTC 1 cut(s) 512
TscAI CASTG 2 cut(s) 1008, 1216
TseI GCWGC 2 cut(s) 4, 1219
TspDTI ATGAA 4 cut(s) 281, 676, 878, 1167
TspGWI ACGGA 2 cut(s) 614, 1079
TspRI CASTG 2 cut(s) 1008, 1216
VpaK11BI GGWCC 1 cut(s) 235
XapI RAATTY 1 cut(s) 1195
XceI RCATGY 1 cut(s) 576
XmnI GAANNNNTTC 2 cut(s) 561, 717
Zsp2I ATGCAT 2 cut(s) 574, 685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.