Rw1G012360
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000076
Physical Location & Seq
Forward (+)
27566251 .. 27567405
1155 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G012360.1

Sequence Viewer

Length: 1155 bp
ATGGAGGAGAGCAGAGGCAATCAACTTCCTGGCCAGAGGTTCTGCCCCATGGAAGATGAACTAGTTCTCTTCTACCTCAAGCCCATGTTGAGCGGACAGATCGTGCCCGGCAGAAACCGCGTGGTGTTCGACTGCGACCTCTACGGTCACCAAGAACCTTGGGAGATATGGGAGGCCTTCAAGACCAAAAGACCACACGACTTGAGGCTCAACAAGGACATTTACTTCTTCACCCAACACAAGAAGATGAGTTCCACAGCCAAGCGCGTACGCCGGAATGTTGGAAGTGGCACCTGGAAGGGCGACGACGCCGGCAAGCCAGTACGATCTGTTGAAACTGGTCGTGTTGTTGGCTTGAAGAAAAGATATACTTACAAGAACGATGACTCGGTTCACAATGGCTGTTGGATCTTGTATGAGTTCTACCTTGATCAATCACTCAGAGACAATAAACAAAAGCTGGAAGACTATGTTCTTTGTCTACTACGAAAGAATGGTGAACCCATAACCAAGATCGAAAAGAAAAGAAAGCAACGTGAAGAGGAAGAGGTTCTTGAAAACAATTATGCCTTTGATGATGGAGAAAAATCGAAAAGGGAGCAAGAAGAGTTGCTTGAGCCACAAGCGAAGCGGCCACGAACGGTGCCATCCATTGGTAATGTACCACTAACAATGCCATCAGAAGATGATGCTGCATTCGCAGCTGAACTAGAAGAGTCGTTGGAATGCTTTGAAGAAGATAATGCACCCTCAGAAGCTCGAGCAATTGGCTTTAAAGGTGGGGAGAATGGTGGACTCCAACAATTAGCAGCCGAGGTGCAATCAGGCCCTCCATTTGTAGACGATCATGGAATATTTAATCCGCTGCCGGAGGAAGACTTTCTCTTGGCGGAAATGTTAGAAGAAATGGGTATGGTGGACATGGAAGAACTAGTTCTTATTAATGGTAAGAGTATTAATATAGATGTGGCAGCTGAAGAAAACGTGGAAAACAGCACCCTTCTCTCTGCTCCTACATCATCCATGTCTTTGGTGGAGGTCTCAAGTACTGTTGAGCAACAAAAGACAGCTGATGAAGATTGTTCAGATTGGTTGGAGTCAATCAATTTTAGTCCTGAGGAGAACAACTTCCTTTTCAGTGAAATGCAATGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

384

Amino Acids

43.88

Weight (kDa)

4.65

Isoelectric Point (pI)

62.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 10 - 142 3.2e-22 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 290, 643
AccB7I CCANNNNNTGG 1 cut(s) 653
AccBSI CCGCTC 1 cut(s) 93
AccI GTMKAC 2 cut(s) 481, 840
AccII CGCG 2 cut(s) 120, 267
AciI CCGC 5 cut(s) 93, 118, 631, 863, 890
AclWI GGATC 1 cut(s) 416
AcoI YGGCCR 2 cut(s) 31, 632
AcuI CTGAAG 1 cut(s) 996
AcyI GRCGYC 1 cut(s) 309
AfaI GTAC 4 cut(s) 270, 324, 663, 1048
AfiI CCNNNNNNNGG 1 cut(s) 653
AgsI TTSAA 5 cut(s) 181, 335, 358, 557, 734
AhlI ACTAGT 2 cut(s) 61, 931
AjnI CCWGG 2 cut(s) 28, 293
AluBI AGCT 5 cut(s) 460, 704, 758, 974, 1070
AluI AGCT 5 cut(s) 460, 704, 758, 974, 1070
Alw26I GTCTC 2 cut(s) 438, 1045
AlwI GGATC 1 cut(s) 416
Ama87I CYCGRG 1 cut(s) 759
AoxI GGCC 4 cut(s) 31, 174, 632, 826
ApeKI GCWGC 5 cut(s) 692, 701, 809, 865, 971
AseI ATTAAT 2 cut(s) 942, 957
Asp700I GAANNNNTTC 5 cut(s) 63, 549, 879, 933, 1127
AspLEI GCGC 1 cut(s) 267
AspS9I GGNCC 1 cut(s) 827
AsuC2I CCSGG 1 cut(s) 108
AsuHPI GGTGA 3 cut(s) 140, 223, 509
AvaI CYCGRG 1 cut(s) 759
AxyI CCTNAGG 1 cut(s) 1116
BaeGI GKGCMC 1 cut(s) 108
BalI TGGCCA 1 cut(s) 33
BanI GGYRCC 2 cut(s) 290, 643
BbsI GAAGAC 2 cut(s) 471, 882
BbvI GCAGC 5 cut(s) 679, 713, 821, 852, 983
BccI CCATC 3 cut(s) 572, 655, 685
BciT130I CCWGG 2 cut(s) 30, 295
BclI TGATCA 1 cut(s) 430
BcnI CCSGG 1 cut(s) 108
BcoDI GTCTC 2 cut(s) 438, 1045
BcuI ACTAGT 2 cut(s) 61, 931
BfaI CTAG 3 cut(s) 62, 710, 932
BisI GCNGC 6 cut(s) 632, 693, 702, 810, 866, 972
BlsI GCNGC 6 cut(s) 633, 694, 703, 811, 867, 973
BmcAI AGTACT 1 cut(s) 1048
Bme1390I CCNGG 3 cut(s) 30, 108, 295
BmeT110I CYCGRG 1 cut(s) 759
BmgT120I GGNCC 1 cut(s) 827
BmiI GGNNCC 2 cut(s) 292, 645
BmrFI CCNGG 3 cut(s) 30, 108, 295
BmsI GCATC 1 cut(s) 679
BpiI GAAGAC 2 cut(s) 471, 882
BpuEI CTTGAG 4 cut(s) 62, 223, 635, 1027
BpuMI CCSGG 1 cut(s) 108
BsaHI GRCGYC 1 cut(s) 309
BsaI GGTCTC 1 cut(s) 1045
BsaJI CCNNGG 3 cut(s) 48, 158, 813
Bsc4I CCNNNNNNNGG 1 cut(s) 653
Bse118I RCCGGY 1 cut(s) 311
Bse1I ACTGG 2 cut(s) 320, 343
Bse21I CCTNAGG 1 cut(s) 1116
Bse3DI GCAATG 1 cut(s) 1154
BseBI CCWGG 2 cut(s) 30, 295
BseDI CCNNGG 3 cut(s) 48, 158, 813
BseGI GGATG 2 cut(s) 647, 1019
BseLI CCNNNNNNNGG 1 cut(s) 653
BseMI GCAATG 1 cut(s) 1154
BseMII CTCAG 3 cut(s) 454, 765, 1107
BseNI ACTGG 2 cut(s) 320, 343
BseRI GAGGAG 2 cut(s) 20, 1133
BseSI GKGCMC 1 cut(s) 108
BseXI GCAGC 5 cut(s) 679, 713, 821, 852, 983
Bsh1236I CGCG 2 cut(s) 120, 267
BshFI GGCC 4 cut(s) 33, 176, 634, 828
BshNI GGYRCC 2 cut(s) 290, 643
BsiHKCI CYCGRG 1 cut(s) 759
BsiSI CCGG 4 cut(s) 108, 274, 312, 869
BsiWI CGTACG 1 cut(s) 268
BslI CCNNNNNNNGG 1 cut(s) 653
BsmAI GTCTC 2 cut(s) 438, 1045
BsmI GAATGC 2 cut(s) 695, 731
BsnI GGCC 4 cut(s) 33, 176, 634, 828
Bso31I GGTCTC 1 cut(s) 1045
BsoBI CYCGRG 1 cut(s) 759
Bsp1286I GDGCHC 1 cut(s) 108
Bsp143I GATC 6 cut(s) 99, 326, 408, 430, 513, 844
Bsp19I CCATGG 1 cut(s) 48
BspACI CCGC 5 cut(s) 93, 118, 631, 863, 890
BspANI GGCC 4 cut(s) 33, 176, 634, 828
BspCNI CTCAG 3 cut(s) 453, 764, 1108
BspFNI CGCG 2 cut(s) 120, 267
BspLI GGNNCC 2 cut(s) 292, 645
BspPI GGATC 1 cut(s) 416
BspT107I GGYRCC 2 cut(s) 290, 643
BspTNI GGTCTC 1 cut(s) 1045
BsrBI CCGCTC 1 cut(s) 93
BsrDI GCAATG 1 cut(s) 1154
BsrFI RCCGGY 1 cut(s) 311
BsrI ACTGG 2 cut(s) 320, 343
BssAI RCCGGY 1 cut(s) 311
BssECI CCNNGG 3 cut(s) 48, 158, 813
BssMI GATC 6 cut(s) 99, 326, 408, 430, 513, 844
BssNI GRCGYC 1 cut(s) 309
BssT1I CCWWGG 2 cut(s) 48, 158
Bst2UI CCWGG 2 cut(s) 30, 295
Bst4CI ACNGT 3 cut(s) 146, 643, 1051
Bst6I CTCTTC 5 cut(s) 74, 534, 540, 600, 708
BstACI GRCGYC 1 cut(s) 309
BstC8I GCNNGC 2 cut(s) 313, 317
BstDEI CTNAG 3 cut(s) 440, 751, 1116
BstDSI CCRYGG 1 cut(s) 48
BstEII GGTNACC 1 cut(s) 146
BstF5I GGATG 2 cut(s) 647, 1019
BstFNI CGCG 2 cut(s) 120, 267
BstHHI GCGC 1 cut(s) 267
BstKTI GATC 6 cut(s) 102, 329, 411, 433, 516, 847
BstMAI GTCTC 2 cut(s) 438, 1045
BstMBI GATC 6 cut(s) 99, 326, 408, 430, 513, 844
BstMWI GCNNNNNNNGC 3 cut(s) 117, 698, 701
BstNI CCWGG 2 cut(s) 30, 295
BstPI GGTNACC 1 cut(s) 146
BstSCI CCNGG 3 cut(s) 28, 106, 293
BstSLI GKGCMC 1 cut(s) 108
BstUI CGCG 2 cut(s) 120, 267
BstV1I GCAGC 5 cut(s) 679, 713, 821, 852, 983
BstV2I GAAGAC 2 cut(s) 471, 882
BstX2I RGATCY 1 cut(s) 408
BstXI CCANNNNNNTGG 1 cut(s) 1030
BstYI RGATCY 1 cut(s) 408
Bsu36I CCTNAGG 1 cut(s) 1116
BsuRI GGCC 4 cut(s) 33, 176, 634, 828
BtgI CCRYGG 1 cut(s) 48
BtsCI GGATG 2 cut(s) 647, 1019
BtsIMutI CAGTG 1 cut(s) 1144
Cac8I GCNNGC 2 cut(s) 313, 317
CfoI GCGC 1 cut(s) 267
Cfr10I RCCGGY 1 cut(s) 311
Cfr13I GGNCC 1 cut(s) 827
CseI GACGC 1 cut(s) 317
Csp6I GTAC 4 cut(s) 269, 323, 662, 1047
CspCI CAANNNNNGTGG 2 cut(s) 183, 218
CviAII CATG 5 cut(s) 49, 85, 848, 922, 1024
CviQI GTAC 4 cut(s) 269, 323, 662, 1047
DdeI CTNAG 3 cut(s) 440, 751, 1116
DpnI GATC 6 cut(s) 101, 328, 410, 432, 515, 846
DpnII GATC 6 cut(s) 99, 326, 408, 430, 513, 844
DraI TTTAAA 1 cut(s) 775
EaeI YGGCCR 2 cut(s) 31, 632
Eam1104I CTCTTC 5 cut(s) 74, 534, 540, 600, 708
EarI CTCTTC 5 cut(s) 74, 534, 540, 600, 708
EciI GGCGGA 1 cut(s) 905
Eco130I CCWWGG 2 cut(s) 48, 158
Eco147I AGGCCT 1 cut(s) 176
Eco31I GGTCTC 1 cut(s) 1045
Eco57I CTGAAG 1 cut(s) 996
Eco81I CCTNAGG 1 cut(s) 1116
Eco88I CYCGRG 1 cut(s) 759
Eco91I GGTNACC 1 cut(s) 146
EcoO109I RGGNCCY 1 cut(s) 827
EcoO65I GGTNACC 1 cut(s) 146
EcoRII CCWGG 2 cut(s) 28, 293
EcoT14I CCWWGG 2 cut(s) 48, 158
ErhI CCWWGG 2 cut(s) 48, 158
FaeI CATG 5 cut(s) 52, 88, 851, 925, 1027
FalI AAGNNNNNCTT 6 cut(s) 355, 387, 537, 569, 597, 629
FatI CATG 5 cut(s) 48, 84, 847, 921, 1023
FbaI TGATCA 1 cut(s) 430
FblI GTMKAC 2 cut(s) 481, 840
Fnu4HI GCNGC 6 cut(s) 632, 693, 702, 810, 866, 972
FokI GGATG 2 cut(s) 634, 1006
Fsp4HI GCNGC 6 cut(s) 632, 693, 702, 810, 866, 972
FspBI CTAG 3 cut(s) 62, 710, 932
GlaI GCGC 1 cut(s) 266
GluI GCNGC 6 cut(s) 632, 693, 702, 810, 866, 972
HaeIII GGCC 4 cut(s) 33, 176, 634, 828
HapII CCGG 4 cut(s) 108, 274, 312, 869
HgaI GACGC 1 cut(s) 317
HhaI GCGC 1 cut(s) 267
Hin1I GRCGYC 1 cut(s) 309
Hin1II CATG 5 cut(s) 52, 88, 851, 925, 1027
Hin6I GCGC 1 cut(s) 265
HinP1I GCGC 1 cut(s) 265
HinfI GANTC 4 cut(s) 386, 716, 795, 1097
HpaII CCGG 4 cut(s) 108, 274, 312, 869
HphI GGTGA 3 cut(s) 140, 223, 509
Hpy166II GTNNAC 6 cut(s) 394, 482, 500, 794, 841, 919
Hpy188I TCNGA 4 cut(s) 443, 682, 754, 1087
Hpy188III TCNNGA 3 cut(s) 181, 554, 1115
Hpy8I GTNNAC 6 cut(s) 394, 482, 500, 794, 841, 919
Hpy99I CGWCG 2 cut(s) 308, 311
HpyAV CCTTC 3 cut(s) 187, 292, 1010
HpyCH4III ACNGT 3 cut(s) 146, 643, 1051
HpyCH4IV ACGT 2 cut(s) 535, 984
HpyCH4V TGCA 4 cut(s) 695, 746, 820, 1147
HpyF10VI GCNNNNNNNGC 3 cut(s) 117, 698, 701
HpyF3I CTNAG 3 cut(s) 440, 751, 1116
HpySE526I ACGT 2 cut(s) 535, 984
Hsp92I GRCGYC 1 cut(s) 309
Hsp92II CATG 5 cut(s) 52, 88, 851, 925, 1027
HspAI GCGC 1 cut(s) 265
KroI GCCGGC 1 cut(s) 311
KroNI GCCGGC 1 cut(s) 313
Ksp22I TGATCA 1 cut(s) 430
Kzo9I GATC 6 cut(s) 99, 326, 408, 430, 513, 844
LmnI GCTCC 2 cut(s) 598, 1015
Lsp1109I GCAGC 5 cut(s) 679, 713, 821, 852, 983
LweI GCATC 1 cut(s) 679
MaeI CTAG 3 cut(s) 62, 710, 932
MaeII ACGT 2 cut(s) 535, 984
MaeIII GTNAC 1 cut(s) 146
MalI GATC 6 cut(s) 101, 328, 410, 432, 515, 846
MbiI CCGCTC 1 cut(s) 93
MboI GATC 6 cut(s) 99, 326, 408, 430, 513, 844
MfeI CAATTG 1 cut(s) 765
MflI RGATCY 1 cut(s) 408
MhlI GDGCHC 1 cut(s) 108
MlsI TGGCCA 1 cut(s) 33
MluCI AATT 4 cut(s) 562, 765, 803, 1105
MluNI TGGCCA 1 cut(s) 33
MlyI GAGTC 4 cut(s) 380, 725, 789, 1106
MmeI TCCRAC 5 cut(s) 262, 386, 702, 823, 1074
Mox20I TGGCCA 1 cut(s) 33
MroNI GCCGGC 1 cut(s) 311
MroXI GAANNNNTTC 5 cut(s) 63, 549, 879, 933, 1127
MscI TGGCCA 1 cut(s) 33
MseI TTAA 4 cut(s) 774, 858, 942, 957
Msp20I TGGCCA 1 cut(s) 33
MspA1I CMGCKG 4 cut(s) 704, 865, 974, 1070
MspI CCGG 4 cut(s) 108, 274, 312, 869
MspR9I CCNGG 3 cut(s) 30, 108, 295
MunI CAATTG 1 cut(s) 765
Mva1269I GAATGC 2 cut(s) 695, 731
MvaI CCWGG 2 cut(s) 30, 295
MvnI CGCG 2 cut(s) 120, 267
MwoI GCNNNNNNNGC 3 cut(s) 117, 698, 701
NaeI GCCGGC 1 cut(s) 313
NciI CCSGG 1 cut(s) 108
NcoI CCATGG 1 cut(s) 48
NdeII GATC 6 cut(s) 99, 326, 408, 430, 513, 844
NgoMIV GCCGGC 1 cut(s) 311
NlaIII CATG 5 cut(s) 52, 88, 851, 925, 1027
NlaIV GGNNCC 2 cut(s) 292, 645
NmeAIII GCCGAG 1 cut(s) 838
NmuCI GTSAC 1 cut(s) 146
PaeR7I CTCGAG 1 cut(s) 759
PceI AGGCCT 1 cut(s) 176
PctI GAATGC 2 cut(s) 695, 731
PdiI GCCGGC 1 cut(s) 313
PdmI GAANNNNTTC 5 cut(s) 63, 549, 879, 933, 1127
Pfl23II CGTACG 1 cut(s) 268
PflMI CCANNNNNTGG 1 cut(s) 653
PkrI GCNGC 6 cut(s) 633, 694, 703, 811, 867, 973
PleI GAGTC 4 cut(s) 380, 724, 789, 1105
PpsI GAGTC 4 cut(s) 380, 724, 789, 1105
PshBI ATTAAT 2 cut(s) 942, 957
Psp6I CCWGG 2 cut(s) 28, 293
PspEI GGTNACC 1 cut(s) 146
PspGI CCWGG 2 cut(s) 28, 293
PspLI CGTACG 1 cut(s) 268
PspN4I GGNNCC 2 cut(s) 292, 645
PspPI GGNCC 1 cut(s) 827
PspXI VCTCGAGB 1 cut(s) 759
PsuI RGATCY 1 cut(s) 408
PvuII CAGCTG 3 cut(s) 704, 974, 1070
RsaI GTAC 4 cut(s) 270, 324, 663, 1048
RsaNI GTAC 4 cut(s) 269, 323, 662, 1047
SaqAI TTAA 4 cut(s) 774, 858, 942, 957
SatI GCNGC 6 cut(s) 632, 693, 702, 810, 866, 972
Sau3AI GATC 6 cut(s) 99, 326, 408, 430, 513, 844
Sau96I GGNCC 1 cut(s) 827
ScaI AGTACT 1 cut(s) 1048
SchI GAGTC 4 cut(s) 380, 725, 789, 1106
ScrFI CCNGG 3 cut(s) 30, 108, 295
SduI GDGCHC 1 cut(s) 108
SfaNI GCATC 1 cut(s) 679
Sfr274I CTCGAG 1 cut(s) 759
SlaI CTCGAG 1 cut(s) 759
SmlI CTYRAG 5 cut(s) 77, 202, 614, 759, 1042
SmoI CTYRAG 5 cut(s) 77, 202, 614, 759, 1042
SpeI ACTAGT 2 cut(s) 61, 931
Sse9I AATT 4 cut(s) 562, 765, 803, 1105
SseBI AGGCCT 1 cut(s) 176
SsiI CCGC 5 cut(s) 93, 118, 631, 863, 890
SspI AATATT 1 cut(s) 855
SspMI CTAG 3 cut(s) 62, 710, 932
StuI AGGCCT 1 cut(s) 176
StyD4I CCNGG 3 cut(s) 28, 106, 293
StyI CCWWGG 2 cut(s) 48, 158
TaaI ACNGT 3 cut(s) 146, 643, 1051
TaiI ACGT 2 cut(s) 538, 987
TaqI TCGA 4 cut(s) 129, 516, 590, 760
TasI AATT 4 cut(s) 562, 765, 803, 1105
TatI WGTACW 1 cut(s) 1046
TauI GCSGC 1 cut(s) 634
Tru1I TTAA 4 cut(s) 774, 858, 942, 957
Tru9I TTAA 4 cut(s) 774, 858, 942, 957
TscAI CASTG 1 cut(s) 1144
TseFI GTSAC 1 cut(s) 146
TseI GCWGC 5 cut(s) 692, 701, 809, 865, 971
Tsp45I GTSAC 1 cut(s) 146
TspDTI ATGAA 2 cut(s) 72, 1089
TspRI CASTG 1 cut(s) 1144
Van91I CCANNNNNTGG 1 cut(s) 653
VspI ATTAAT 2 cut(s) 942, 957
XcmI CCANNNNNNNNNTGG 1 cut(s) 1030
XhoI CTCGAG 1 cut(s) 759
XmiI GTMKAC 2 cut(s) 481, 840
XmnI GAANNNNTTC 5 cut(s) 63, 549, 879, 933, 1127
XspI CTAG 3 cut(s) 62, 710, 932
ZrmI AGTACT 1 cut(s) 1048
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.