snRNA-activating protein complex
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| CBFB_NFYA | PF02045 | 172 - 227 | 2.4e-26 | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 846 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 370, 407, 463, 733 |
| AccII | CGCG | 2 cut(s) | 235, 546 |
| AciI | CCGC | 3 cut(s) | 544, 559, 938 |
| AclWI | GGATC | 3 cut(s) | 60, 73, 673 |
| AcsI | RAATTY | 1 cut(s) | 176 |
| AcuI | CTGAAG | 1 cut(s) | 726 |
| AcyI | GRCGYC | 1 cut(s) | 843 |
| AfaI | GTAC | 1 cut(s) | 542 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 75, 293, 370, 407, 463, 609, 733, 987 |
| AflIII | ACRYGT | 1 cut(s) | 637 |
| AgsI | TTSAA | 6 cut(s) | 13, 92, 136, 194, 256, 584 |
| AjnI | CCWGG | 1 cut(s) | 475 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 390, 422 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 324, 356 |
| AluBI | AGCT | 7 cut(s) | 352, 440, 580, 587, 598, 697, 757 |
| AluI | AGCT | 7 cut(s) | 352, 440, 580, 587, 598, 697, 757 |
| Alw26I | GTCTC | 1 cut(s) | 915 |
| AlwI | GGATC | 3 cut(s) | 60, 73, 673 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 749, 785 |
| AoxI | GGCC | 3 cut(s) | 284, 295, 431 |
| ApeKI | GCWGC | 2 cut(s) | 422, 928 |
| ApoI | RAATTY | 1 cut(s) | 176 |
| AspLEI | GCGC | 3 cut(s) | 237, 548, 678 |
| AspS9I | GGNCC | 2 cut(s) | 295, 431 |
| BamHI | GGATCC | 1 cut(s) | 65 |
| BbsI | GAAGAC | 1 cut(s) | 331 |
| BbvI | GCAGC | 2 cut(s) | 409, 915 |
| BccI | CCATC | 3 cut(s) | 133, 457, 809 |
| BceAI | ACGGC | 2 cut(s) | 601, 896 |
| BciT130I | CCWGG | 1 cut(s) | 477 |
| BcoDI | GTCTC | 1 cut(s) | 915 |
| BfaI | CTAG | 4 cut(s) | 249, 660, 849, 941 |
| BfmI | CTRYAG | 2 cut(s) | 28, 104 |
| BfoI | RGCGCY | 1 cut(s) | 679 |
| BisI | GCNGC | 2 cut(s) | 423, 929 |
| BlpI | GCTNAGC | 1 cut(s) | 753 |
| BlsI | GCNGC | 2 cut(s) | 424, 930 |
| Bme1390I | CCNGG | 1 cut(s) | 477 |
| BmgT120I | GGNCC | 2 cut(s) | 295, 431 |
| BmiI | GGNNCC | 3 cut(s) | 67, 296, 486 |
| BmrFI | CCNGG | 1 cut(s) | 477 |
| BmsI | GCATC | 1 cut(s) | 727 |
| BpiI | GAAGAC | 1 cut(s) | 331 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 753 |
| BsaHI | GRCGYC | 1 cut(s) | 843 |
| BsaJI | CCNNGG | 2 cut(s) | 369, 878 |
| BsaWI | WCCGGW | 2 cut(s) | 767, 987 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 75, 293, 370, 407, 463, 609, 733, 987 |
| Bse1I | ACTGG | 1 cut(s) | 229 |
| BseBI | CCWGG | 1 cut(s) | 477 |
| BseDI | CCNNGG | 2 cut(s) | 369, 878 |
| BseGI | GGATG | 3 cut(s) | 206, 451, 742 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 75, 293, 370, 407, 463, 609, 733, 987 |
| BseMII | CTCAG | 2 cut(s) | 545, 767 |
| BseNI | ACTGG | 1 cut(s) | 229 |
| BseRI | GAGGAG | 1 cut(s) | 304 |
| BseXI | GCAGC | 2 cut(s) | 409, 915 |
| Bsh1236I | CGCG | 2 cut(s) | 235, 546 |
| BshFI | GGCC | 3 cut(s) | 286, 297, 433 |
| BsiSI | CCGG | 2 cut(s) | 768, 988 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 75, 293, 370, 407, 463, 609, 733, 987 |
| BsmAI | GTCTC | 1 cut(s) | 915 |
| BsmBI | CGTCTC | 1 cut(s) | 915 |
| BsnI | GGCC | 3 cut(s) | 286, 297, 433 |
| Bsp143I | GATC | 4 cut(s) | 65, 196, 499, 665 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 753 |
| Bsp19I | CCATGG | 1 cut(s) | 369 |
| BspACI | CCGC | 3 cut(s) | 544, 559, 938 |
| BspANI | GGCC | 3 cut(s) | 286, 297, 433 |
| BspCNI | CTCAG | 2 cut(s) | 546, 766 |
| BspFNI | CGCG | 2 cut(s) | 235, 546 |
| BspHI | TCATGA | 2 cut(s) | 625, 793 |
| BspLI | GGNNCC | 3 cut(s) | 67, 296, 486 |
| BspPI | GGATC | 3 cut(s) | 60, 73, 673 |
| BsrI | ACTGG | 1 cut(s) | 229 |
| BssECI | CCNNGG | 2 cut(s) | 369, 878 |
| BssMI | GATC | 4 cut(s) | 65, 196, 499, 665 |
| BssNI | GRCGYC | 1 cut(s) | 843 |
| BssT1I | CCWWGG | 1 cut(s) | 369 |
| Bst2UI | CCWGG | 1 cut(s) | 477 |
| Bst4CI | ACNGT | 4 cut(s) | 108, 392, 540, 863 |
| Bst6I | CTCTTC | 1 cut(s) | 76 |
| BstACI | GRCGYC | 1 cut(s) | 843 |
| BstDEI | CTNAG | 3 cut(s) | 554, 708, 753 |
| BstDSI | CCRYGG | 2 cut(s) | 369, 878 |
| BstF5I | GGATG | 3 cut(s) | 206, 451, 742 |
| BstFNI | CGCG | 2 cut(s) | 235, 546 |
| BstH2I | RGCGCY | 1 cut(s) | 679 |
| BstHHI | GCGC | 3 cut(s) | 237, 548, 678 |
| BstKTI | GATC | 4 cut(s) | 68, 199, 502, 668 |
| BstMAI | GTCTC | 1 cut(s) | 915 |
| BstMBI | GATC | 4 cut(s) | 65, 196, 499, 665 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 937 |
| BstNI | CCWGG | 1 cut(s) | 477 |
| BstNSI | RCATGY | 1 cut(s) | 641 |
| BstSCI | CCNGG | 1 cut(s) | 475 |
| BstSFI | CTRYAG | 2 cut(s) | 28, 104 |
| BstUI | CGCG | 2 cut(s) | 235, 546 |
| BstV1I | GCAGC | 2 cut(s) | 409, 915 |
| BstV2I | GAAGAC | 1 cut(s) | 331 |
| BstX2I | RGATCY | 2 cut(s) | 65, 665 |
| BstYI | RGATCY | 2 cut(s) | 65, 665 |
| BsuRI | GGCC | 3 cut(s) | 286, 297, 433 |
| BtgI | CCRYGG | 2 cut(s) | 369, 878 |
| BtsCI | GGATG | 3 cut(s) | 206, 451, 742 |
| BtsIMutI | CAGTG | 3 cut(s) | 222, 388, 868 |
| CaiI | CAGNNNCTG | 2 cut(s) | 749, 785 |
| CciI | TCATGA | 2 cut(s) | 625, 793 |
| CfoI | GCGC | 3 cut(s) | 237, 548, 678 |
| Cfr13I | GGNCC | 2 cut(s) | 295, 431 |
| CseI | GACGC | 1 cut(s) | 934 |
| Csp6I | GTAC | 1 cut(s) | 541 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 160, 195 |
| CviAII | CATG | 9 cut(s) | 75, 370, 377, 626, 638, 644, 688, 794, 974 |
| CviQI | GTAC | 1 cut(s) | 541 |
| DdeI | CTNAG | 3 cut(s) | 554, 708, 753 |
| DpnI | GATC | 4 cut(s) | 67, 198, 501, 667 |
| DpnII | GATC | 4 cut(s) | 65, 196, 499, 665 |
| Eam1104I | CTCTTC | 1 cut(s) | 76 |
| EarI | CTCTTC | 1 cut(s) | 76 |
| EciI | GGCGGA | 1 cut(s) | 574 |
| Eco130I | CCWWGG | 1 cut(s) | 369 |
| Eco147I | AGGCCT | 1 cut(s) | 286 |
| Eco57I | CTGAAG | 1 cut(s) | 726 |
| EcoRII | CCWGG | 1 cut(s) | 475 |
| EcoT14I | CCWWGG | 1 cut(s) | 369 |
| EcoT22I | ATGCAT | 1 cut(s) | 649 |
| ErhI | CCWWGG | 1 cut(s) | 369 |
| Esp3I | CGTCTC | 1 cut(s) | 915 |
| FaeI | CATG | 9 cut(s) | 78, 373, 380, 629, 641, 647, 691, 797, 977 |
| FatI | CATG | 9 cut(s) | 74, 369, 376, 625, 637, 643, 687, 793, 973 |
| Fnu4HI | GCNGC | 2 cut(s) | 423, 929 |
| FokI | GGATG | 3 cut(s) | 193, 438, 749 |
| Fsp4HI | GCNGC | 2 cut(s) | 423, 929 |
| FspBI | CTAG | 4 cut(s) | 249, 660, 849, 941 |
| GlaI | GCGC | 3 cut(s) | 236, 547, 677 |
| GluI | GCNGC | 2 cut(s) | 423, 929 |
| HaeII | RGCGCY | 1 cut(s) | 679 |
| HaeIII | GGCC | 3 cut(s) | 286, 297, 433 |
| HapII | CCGG | 2 cut(s) | 768, 988 |
| HgaI | GACGC | 1 cut(s) | 934 |
| HhaI | GCGC | 3 cut(s) | 237, 548, 678 |
| Hin1I | GRCGYC | 1 cut(s) | 843 |
| Hin1II | CATG | 9 cut(s) | 78, 373, 380, 629, 641, 647, 691, 797, 977 |
| Hin6I | GCGC | 3 cut(s) | 235, 546, 676 |
| HinP1I | GCGC | 3 cut(s) | 235, 546, 676 |
| HindIII | AAGCTT | 2 cut(s) | 578, 596 |
| HinfI | GANTC | 4 cut(s) | 203, 629, 704, 782 |
| HpaII | CCGG | 2 cut(s) | 768, 988 |
| Hpy166II | GTNNAC | 1 cut(s) | 529 |
| Hpy188I | TCNGA | 7 cut(s) | 165, 241, 555, 612, 781, 787, 841 |
| Hpy188III | TCNNGA | 9 cut(s) | 133, 194, 200, 329, 497, 626, 633, 794, 812 |
| Hpy8I | GTNNAC | 1 cut(s) | 529 |
| Hpy99I | CGWCG | 1 cut(s) | 845 |
| HpyAV | CCTTC | 4 cut(s) | 200, 254, 354, 991 |
| HpyCH4III | ACNGT | 4 cut(s) | 108, 392, 540, 863 |
| HpyCH4IV | ACGT | 1 cut(s) | 843 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 647, 931 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 937 |
| HpyF3I | CTNAG | 3 cut(s) | 554, 708, 753 |
| HpySE526I | ACGT | 1 cut(s) | 843 |
| Hsp92I | GRCGYC | 1 cut(s) | 843 |
| Hsp92II | CATG | 9 cut(s) | 78, 373, 380, 629, 641, 647, 691, 797, 977 |
| HspAI | GCGC | 3 cut(s) | 235, 546, 676 |
| Kzo9I | GATC | 4 cut(s) | 65, 196, 499, 665 |
| LmnI | GCTCC | 2 cut(s) | 702, 842 |
| Lsp1109I | GCAGC | 2 cut(s) | 409, 915 |
| LweI | GCATC | 1 cut(s) | 727 |
| MaeI | CTAG | 4 cut(s) | 249, 660, 849, 941 |
| MaeII | ACGT | 1 cut(s) | 843 |
| MaeIII | GTNAC | 2 cut(s) | 844, 863 |
| MalI | GATC | 4 cut(s) | 67, 198, 501, 667 |
| MboI | GATC | 4 cut(s) | 65, 196, 499, 665 |
| MboII | GAAGA | 6 cut(s) | 42, 63, 148, 331, 614, 976 |
| MflI | RGATCY | 2 cut(s) | 65, 665 |
| MluCI | AATT | 5 cut(s) | 82, 176, 242, 549, 566 |
| MmeI | TCCRAC | 4 cut(s) | 43, 143, 864, 902 |
| Mph1103I | ATGCAT | 1 cut(s) | 649 |
| MseI | TTAA | 1 cut(s) | 650 |
| MslI | CAYNNNNRTG | 1 cut(s) | 642 |
| MspI | CCGG | 2 cut(s) | 768, 988 |
| MspR9I | CCNGG | 1 cut(s) | 477 |
| MvaI | CCWGG | 1 cut(s) | 477 |
| MvnI | CGCG | 2 cut(s) | 235, 546 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 937 |
| NcoI | CCATGG | 1 cut(s) | 369 |
| NdeII | GATC | 4 cut(s) | 65, 196, 499, 665 |
| NlaIII | CATG | 9 cut(s) | 78, 373, 380, 629, 641, 647, 691, 797, 977 |
| NlaIV | GGNNCC | 3 cut(s) | 67, 296, 486 |
| NmuCI | GTSAC | 2 cut(s) | 844, 863 |
| NsiI | ATGCAT | 1 cut(s) | 649 |
| NspI | RCATGY | 1 cut(s) | 641 |
| PagI | TCATGA | 2 cut(s) | 625, 793 |
| PceI | AGGCCT | 1 cut(s) | 286 |
| PciI | ACATGT | 1 cut(s) | 637 |
| PfeI | GAWTC | 4 cut(s) | 203, 629, 704, 782 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 370, 407, 463, 733 |
| PkrI | GCNGC | 2 cut(s) | 424, 930 |
| PscI | ACATGT | 1 cut(s) | 637 |
| Psp6I | CCWGG | 1 cut(s) | 475 |
| PspGI | CCWGG | 1 cut(s) | 475 |
| PspN4I | GGNNCC | 3 cut(s) | 67, 296, 486 |
| PspPI | GGNCC | 2 cut(s) | 295, 431 |
| PstNI | CAGNNNCTG | 2 cut(s) | 749, 785 |
| PsuI | RGATCY | 2 cut(s) | 65, 665 |
| RsaI | GTAC | 1 cut(s) | 542 |
| RsaNI | GTAC | 1 cut(s) | 541 |
| RseI | CAYNNNNRTG | 1 cut(s) | 642 |
| SaqAI | TTAA | 1 cut(s) | 650 |
| SatI | GCNGC | 2 cut(s) | 423, 929 |
| Sau3AI | GATC | 4 cut(s) | 65, 196, 499, 665 |
| Sau96I | GGNCC | 2 cut(s) | 295, 431 |
| ScrFI | CCNGG | 1 cut(s) | 477 |
| SfaNI | GCATC | 1 cut(s) | 727 |
| SfcI | CTRYAG | 2 cut(s) | 28, 104 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 642 |
| Sse9I | AATT | 5 cut(s) | 82, 176, 242, 549, 566 |
| SseBI | AGGCCT | 1 cut(s) | 286 |
| SsiI | CCGC | 3 cut(s) | 544, 559, 938 |
| SspMI | CTAG | 4 cut(s) | 249, 660, 849, 941 |
| StuI | AGGCCT | 1 cut(s) | 286 |
| StyD4I | CCNGG | 1 cut(s) | 475 |
| StyI | CCWWGG | 1 cut(s) | 369 |
| TaaI | ACNGT | 4 cut(s) | 108, 392, 540, 863 |
| TaiI | ACGT | 1 cut(s) | 846 |
| TaqI | TCGA | 4 cut(s) | 44, 119, 634, 811 |
| TasI | AATT | 5 cut(s) | 82, 176, 242, 549, 566 |
| TfiI | GAWTC | 4 cut(s) | 203, 629, 704, 782 |
| Tru1I | TTAA | 1 cut(s) | 650 |
| Tru9I | TTAA | 1 cut(s) | 650 |
| TscAI | CASTG | 3 cut(s) | 229, 395, 868 |
| TseFI | GTSAC | 2 cut(s) | 844, 863 |
| TseI | GCWGC | 2 cut(s) | 422, 928 |
| Tsp45I | GTSAC | 2 cut(s) | 844, 863 |
| TspRI | CASTG | 3 cut(s) | 229, 395, 868 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 370, 407, 463, 733 |
| XapI | RAATTY | 1 cut(s) | 176 |
| XceI | RCATGY | 1 cut(s) | 641 |
| XspI | CTAG | 4 cut(s) | 249, 660, 849, 941 |
| ZraI | GACGTC | 1 cut(s) | 844 |
| Zsp2I | ATGCAT | 1 cut(s) | 649 |