MD06G1030300.v1.1
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0000076
Physical Location & Seq
Reverse (-)
3613999 .. 3615934
1936 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1030300.v1.1.491

Sequence Viewer

Length: 1518 bp
ATGGAGCACGTTTACGATGATCGTATGCTTCCAGGGTACAGGTTTTGCCCCTTGGAAGAAGAGCTCATTCTCCACTACCTTCTCCCTAAGGCTAACGGCATGGTTGTACCCGGAATAGACCACGTCGTTTTCGACTTCAATCTATACGGTGACCAAGAACCATCGGCCGTATGGGAAAACTTCAAAACAAGAAGAGCAAACGACTTGAGGAGGAATAAGGACCTCTACTTCATCACTGAACTCACCACAAAAGTTCCAAGAGGCTCACGTATATCCCGAACTGTTGCCAAGGGAGTCGGCACCTGGAAAGGGGATGATAAAGGCAAGAAGATATGTTATCCAGCCGGGACTCACAATGTTATTGGCTACAGAAAAAGATTTCACTACGAGACCAAGGGGTCTGGGAAAGATGACAGGTGGATCATGCTTCAGTTTGATCTTCATCAGTCTCTCATACACAACCAACAAGAGAAGAAATATGTTCTATGCGTACTTCGTAAAAATGAGGAATTTGACAAGAAACGAAAACAACTAGCAGAGGAGGATGATGAGATGGTTGGAGAAGATGTTGATAATAAATCAGCCCGTTCGCTTGAGACACAGGGAAAACGGCAGCGCCTCTTACCATGTGTAACTGAGCTGCAATACCTTCAGCCACGCATCAATATGATCAGTAGTCCACCATTAGCAACTGGATTAGCGCATGCAAGAGAAGAAAATCAGGGACAGGAATTACTCGTAACTTGCTTTAACAACGTACCATCATTTGCAGACAATGAACCGAGTGCCTTGCAATGGGAAGAAGCTTGGTGTCAGCAACAGCAAAAACTCCAACCATGCATTGACAATAATAATATTGTACCAGCTGCTGTAACACTACCTGATTATTTTGATCAATACGTTGGCGACACAGGATATACTGCGACTACGCAAGCTGATCGTCATTATCCATATGTCAGCGAAACCGGATTTACTTCGACTACTCAAGCTCATGATCATCCATATGTCGACGCCTCAGGATTCCCTGTGACTACTCAAGCTCATGATATTCACCAATATGTGGACAGCACAGGACTTGCTGCGAGTACTCAAGCTGATCATCTCCATTCATATATCAACGGTATGGGATTTTCTCTGAGTACTCAAGCTCATGATCTTCAGCAATATGTCAACAGCACAAGGTTTGCTGCGACTACTCAAGTTGATCATCTTCATTCATATGTCGACGGTGCAGGATTTGATGTGACTACTCAAGCTCATGATCTTCATCAATATGTTGACGGGACAAGATTTGCTGCGACTACTCAAACTGATCATCTTTATCCATATGCCGATGACACAGGATTCACTGCTACTACTACTCAAGCTGATCATCTTTATCCACCAAGTAATAATGTGTTGGGAGGATTGGGTGATTTAATCAGTGATAATTTCGAATCGGACTCTATGGGGGGTGAGGATCTCTGGATTTCTGCCGATGAGCTACTCAGATCAACACCAGACCATGCGAATCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

506

Amino Acids

57.08

Weight (kDa)

5.19

Isoelectric Point (pI)

37.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 11 - 147 2.4e-20 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 397
AccB1I GGYRCC 1 cut(s) 299
AccB7I CCANNNNNTGG 1 cut(s) 1060
AccI GTMKAC 2 cut(s) 1008, 1224
AclWI GGATC 2 cut(s) 428, 1467
AcoI YGGCCR 1 cut(s) 165
AcsI RAATTY 1 cut(s) 509
AcuI CTGAAG 3 cut(s) 413, 635, 1142
AcyI GRCGYC 1 cut(s) 1011
AfaI GTAC 7 cut(s) 38, 108, 492, 759, 861, 1087, 1141
AfiI CCNNNNNNNGG 3 cut(s) 309, 795, 1060
AgsI TTSAA 2 cut(s) 139, 184
AjiI CACGTC 1 cut(s) 124
AjnI CCWGG 2 cut(s) 31, 302
Alw21I GWGCWC 2 cut(s) 9, 66
Alw26I GTCTC 3 cut(s) 383, 453, 590
AlwI GGATC 2 cut(s) 428, 1467
AlwNI CAGNNNCTG 1 cut(s) 869
AoxI GGCC 1 cut(s) 165
ApeKI GCWGC 6 cut(s) 613, 640, 866, 1079, 1187, 1295
ApoI RAATTY 1 cut(s) 509
AspLEI GCGC 2 cut(s) 618, 703
AspS9I GGNCC 1 cut(s) 220
AsuC2I CCSGG 2 cut(s) 111, 346
AsuHPI GGTGA 5 cut(s) 161, 235, 1043, 1424, 1466
AsuII TTCGAA 1 cut(s) 1434
AvaII GGWCC 1 cut(s) 220
AxyI CCTNAGG 2 cut(s) 87, 1015
BanI GGYRCC 1 cut(s) 299
BanII GRGCYC 1 cut(s) 66
Bbv12I GWGCWC 2 cut(s) 9, 66
BbvI GCAGC 6 cut(s) 625, 627, 853, 1066, 1174, 1282
BccI CCATC 3 cut(s) 169, 547, 769
BceAI ACGGC 3 cut(s) 112, 152, 626
BcgI CGANNNNNNTGC 4 cut(s) 772, 806, 920, 954
BciT130I CCWGG 2 cut(s) 33, 304
BclI TGATCA 7 cut(s) 669, 892, 994, 1096, 1204, 1312, 1369
BcnI CCSGG 2 cut(s) 111, 346
BcoDI GTCTC 3 cut(s) 383, 453, 590
BfaI CTAG 1 cut(s) 533
BfmI CTRYAG 1 cut(s) 367
BfoI RGCGCY 1 cut(s) 619
BisI GCNGC 6 cut(s) 614, 641, 867, 1080, 1188, 1296
BlsI GCNGC 6 cut(s) 615, 642, 868, 1081, 1189, 1297
BmcAI AGTACT 2 cut(s) 1087, 1141
Bme1390I CCNGG 4 cut(s) 33, 111, 304, 346
Bme18I GGWCC 1 cut(s) 220
BmgBI CACGTC 1 cut(s) 124
BmgT120I GGNCC 1 cut(s) 220
BmiI GGNNCC 1 cut(s) 301
BmrFI CCNGG 4 cut(s) 33, 111, 304, 346
BmsI GCATC 1 cut(s) 669
Bpu14I TTCGAA 1 cut(s) 1434
BpuEI CTTGAG 9 cut(s) 226, 614, 969, 1020, 1074, 1128, 1182, 1236, 1347
BpuMI CCSGG 2 cut(s) 111, 346
BsaAI YACGTR 1 cut(s) 269
BsaBI GATNNNNATC 2 cut(s) 441, 1266
BsaHI GRCGYC 1 cut(s) 1011
BsaI GGTCTC 1 cut(s) 383
BsaJI CCNNGG 4 cut(s) 32, 51, 288, 393
BsaWI WCCGGW 1 cut(s) 965
BsaXI ACNNNNNCTCC 2 cut(s) 552, 582
Bsc4I CCNNNNNNNGG 3 cut(s) 309, 795, 1060
Bse1I ACTGG 1 cut(s) 697
Bse21I CCTNAGG 2 cut(s) 87, 1015
Bse3DI GCAATG 1 cut(s) 800
Bse8I GATNNNNATC 2 cut(s) 441, 1266
BseBI CCWGG 2 cut(s) 33, 304
BseDI CCNNGG 4 cut(s) 32, 51, 288, 393
BseGI GGATG 3 cut(s) 319, 550, 997
BseJI GATNNNNATC 2 cut(s) 441, 1266
BseLI CCNNNNNNNGG 3 cut(s) 309, 795, 1060
BseMI GCAATG 1 cut(s) 800
BseMII CTCAG 4 cut(s) 627, 1029, 1127, 1501
BseNI ACTGG 1 cut(s) 697
BseRI GAGGAG 2 cut(s) 223, 554
BseX3I CGGCCG 1 cut(s) 165
BseXI GCAGC 6 cut(s) 625, 627, 853, 1066, 1174, 1282
BsgI GTGCAG 1 cut(s) 1251
Bsh1285I CGRYCG 1 cut(s) 168
BshFI GGCC 1 cut(s) 167
BshNI GGYRCC 1 cut(s) 299
BsiEI CGRYCG 1 cut(s) 168
BsiHKAI GWGCWC 2 cut(s) 9, 66
BsiSI CCGG 3 cut(s) 111, 345, 966
BslFI GGGAC 3 cut(s) 361, 738, 1297
BslI CCNNNNNNNGG 3 cut(s) 309, 795, 1060
BsmAI GTCTC 3 cut(s) 383, 453, 590
BsmFI GGGAC 3 cut(s) 361, 738, 1297
BsnI GGCC 1 cut(s) 167
Bso31I GGTCTC 1 cut(s) 383
Bsp119I TTCGAA 1 cut(s) 1434
Bsp1286I GDGCHC 2 cut(s) 9, 66
BspANI GGCC 1 cut(s) 167
BspCNI CTCAG 4 cut(s) 628, 1028, 1128, 1500
BspHI TCATGA 4 cut(s) 991, 1042, 1150, 1258
BspLI GGNNCC 1 cut(s) 301
BspPI GGATC 2 cut(s) 428, 1467
BspQI GCTCTTC 2 cut(s) 54, 187
BspT104I TTCGAA 1 cut(s) 1434
BspT107I GGYRCC 1 cut(s) 299
BspTNI GGTCTC 1 cut(s) 383
BsrDI GCAATG 1 cut(s) 800
BsrI ACTGG 1 cut(s) 697
BssECI CCNNGG 4 cut(s) 32, 51, 288, 393
BssNI GRCGYC 1 cut(s) 1011
BssT1I CCWWGG 3 cut(s) 51, 288, 393
Bst2UI CCWGG 2 cut(s) 33, 304
Bst4CI ACNGT 4 cut(s) 149, 283, 1121, 1229
Bst6I CTCTTC 2 cut(s) 54, 187
BstACI GRCGYC 1 cut(s) 1011
BstBAI YACGTR 1 cut(s) 269
BstBI TTCGAA 1 cut(s) 1434
BstC8I GCNNGC 2 cut(s) 705, 933
BstDEI CTNAG 5 cut(s) 87, 636, 1015, 1136, 1487
BstEII GGTNACC 1 cut(s) 149
BstF5I GGATG 3 cut(s) 319, 550, 997
BstH2I RGCGCY 1 cut(s) 619
BstHHI GCGC 2 cut(s) 618, 703
BstMAI GTCTC 3 cut(s) 383, 453, 590
BstMCI CGRYCG 1 cut(s) 168
BstNI CCWGG 2 cut(s) 33, 304
BstNSI RCATGY 1 cut(s) 707
BstPI GGTNACC 1 cut(s) 149
BstSCI CCNGG 4 cut(s) 31, 109, 302, 344
BstSFI CTRYAG 1 cut(s) 367
BstV1I GCAGC 6 cut(s) 625, 627, 853, 1066, 1174, 1282
BstX2I RGATCY 1 cut(s) 1459
BstYI RGATCY 1 cut(s) 1459
BstZI CGGCCG 1 cut(s) 165
Bsu36I CCTNAGG 2 cut(s) 87, 1015
BsuRI GGCC 1 cut(s) 167
BtrI CACGTC 1 cut(s) 124
BtsCI GGATG 3 cut(s) 319, 550, 997
BtsI GCAGTG 1 cut(s) 1347
BtsIMutI CAGTG 3 cut(s) 234, 1347, 1429
Cac8I GCNNGC 2 cut(s) 705, 933
CaiI CAGNNNCTG 1 cut(s) 869
CciI TCATGA 4 cut(s) 991, 1042, 1150, 1258
CfoI GCGC 2 cut(s) 618, 703
Cfr13I GGNCC 1 cut(s) 220
CseI GACGC 1 cut(s) 1019
Csp6I GTAC 7 cut(s) 37, 107, 491, 758, 860, 1086, 1140
CviQI GTAC 7 cut(s) 37, 107, 491, 758, 860, 1086, 1140
DdeI CTNAG 5 cut(s) 87, 636, 1015, 1136, 1487
DrdI GACNNNNNNGTC 1 cut(s) 397
DseDI GACNNNNNNGTC 1 cut(s) 397
EaeI YGGCCR 1 cut(s) 165
EagI CGGCCG 1 cut(s) 165
Eam1104I CTCTTC 2 cut(s) 54, 187
EarI CTCTTC 2 cut(s) 54, 187
Ecl136II GAGCTC 1 cut(s) 64
EclXI CGGCCG 1 cut(s) 165
Eco130I CCWWGG 3 cut(s) 51, 288, 393
Eco24I GRGCYC 1 cut(s) 66
Eco31I GGTCTC 1 cut(s) 383
Eco47I GGWCC 1 cut(s) 220
Eco52I CGGCCG 1 cut(s) 165
Eco53kI GAGCTC 1 cut(s) 64
Eco57I CTGAAG 3 cut(s) 413, 635, 1142
Eco81I CCTNAGG 2 cut(s) 87, 1015
Eco91I GGTNACC 1 cut(s) 149
EcoICRI GAGCTC 1 cut(s) 64
EcoO109I RGGNCCY 1 cut(s) 220
EcoO65I GGTNACC 1 cut(s) 149
EcoRII CCWGG 2 cut(s) 31, 302
EcoT14I CCWWGG 3 cut(s) 51, 288, 393
EcoT22I ATGCAT 1 cut(s) 842
EcoT38I GRGCYC 1 cut(s) 66
ErhI CCWWGG 3 cut(s) 51, 288, 393
FaqI GGGAC 3 cut(s) 361, 738, 1297
FauNDI CATATG 4 cut(s) 952, 1003, 1219, 1327
FbaI TGATCA 7 cut(s) 669, 892, 994, 1096, 1204, 1312, 1369
FblI GTMKAC 2 cut(s) 1008, 1224
Fnu4HI GCNGC 6 cut(s) 614, 641, 867, 1080, 1188, 1296
FokI GGATG 3 cut(s) 326, 557, 984
FriOI GRGCYC 1 cut(s) 66
Fsp4HI GCNGC 6 cut(s) 614, 641, 867, 1080, 1188, 1296
FspBI CTAG 1 cut(s) 533
GlaI GCGC 2 cut(s) 617, 702
GluI GCNGC 6 cut(s) 614, 641, 867, 1080, 1188, 1296
HaeII RGCGCY 1 cut(s) 619
HaeIII GGCC 1 cut(s) 167
HapII CCGG 3 cut(s) 111, 345, 966
HgaI GACGC 1 cut(s) 1019
HhaI GCGC 2 cut(s) 618, 703
Hin1I GRCGYC 1 cut(s) 1011
Hin6I GCGC 2 cut(s) 616, 701
HinP1I GCGC 2 cut(s) 616, 701
HincII GTYRAC 4 cut(s) 1009, 1171, 1225, 1279
HindII GTYRAC 4 cut(s) 1009, 1171, 1225, 1279
HindIII AAGCTT 1 cut(s) 804
HinfI GANTC 7 cut(s) 294, 349, 1020, 1344, 1436, 1442, 1510
HpaII CCGG 3 cut(s) 111, 345, 966
HphI GGTGA 5 cut(s) 161, 235, 1043, 1424, 1466
Hpy166II GTNNAC 7 cut(s) 13, 680, 1009, 1063, 1171, 1225, 1279
Hpy188I TCNGA 3 cut(s) 1137, 1441, 1490
Hpy188III TCNNGA 7 cut(s) 276, 992, 1017, 1043, 1151, 1259, 1465
Hpy8I GTNNAC 7 cut(s) 13, 680, 1009, 1063, 1171, 1225, 1279
Hpy99I CGWCG 3 cut(s) 128, 1013, 1229
HpyAV CCTTC 2 cut(s) 89, 659
HpyCH4III ACNGT 4 cut(s) 149, 283, 1121, 1229
HpyCH4IV ACGT 5 cut(s) 9, 123, 268, 756, 900
HpyCH4V TGCA 6 cut(s) 643, 707, 770, 793, 840, 1232
HpyF3I CTNAG 5 cut(s) 87, 636, 1015, 1136, 1487
HpySE526I ACGT 5 cut(s) 9, 123, 268, 756, 900
Hsp92I GRCGYC 1 cut(s) 1011
HspAI GCGC 2 cut(s) 616, 701
Ksp22I TGATCA 7 cut(s) 669, 892, 994, 1096, 1204, 1312, 1369
LguI GCTCTTC 2 cut(s) 54, 187
LmnI GCTCC 1 cut(s) 4
Lsp1109I GCAGC 6 cut(s) 625, 627, 853, 1066, 1174, 1282
LweI GCATC 1 cut(s) 669
MaeI CTAG 1 cut(s) 533
MaeII ACGT 5 cut(s) 9, 123, 268, 756, 900
MaeIII GTNAC 6 cut(s) 149, 631, 739, 871, 1027, 1243
MflI RGATCY 1 cut(s) 1459
MhlI GDGCHC 2 cut(s) 9, 66
MluCI AATT 3 cut(s) 509, 731, 1429
MlyI GAGTC 3 cut(s) 303, 343, 1436
MmeI TCCRAC 2 cut(s) 538, 856
Mph1103I ATGCAT 1 cut(s) 842
MseI TTAA 2 cut(s) 750, 1418
MslI CAYNNNNRTG 5 cut(s) 665, 1002, 1056, 1218, 1272
MspA1I CMGCKG 1 cut(s) 866
MspI CCGG 3 cut(s) 111, 345, 966
MspR9I CCNGG 4 cut(s) 33, 111, 304, 346
MvaI CCWGG 2 cut(s) 33, 304
NciI CCSGG 2 cut(s) 111, 346
NdeI CATATG 4 cut(s) 952, 1003, 1219, 1327
NlaIV GGNNCC 1 cut(s) 301
NmuCI GTSAC 3 cut(s) 149, 1027, 1243
NsiI ATGCAT 1 cut(s) 842
NspI RCATGY 1 cut(s) 707
NspV TTCGAA 1 cut(s) 1434
PaeI GCATGC 1 cut(s) 707
PagI TCATGA 4 cut(s) 991, 1042, 1150, 1258
PciSI GCTCTTC 2 cut(s) 54, 187
PcsI WCGNNNNNNNCGW 2 cut(s) 129, 274
PfeI GAWTC 4 cut(s) 1020, 1344, 1436, 1510
PflFI GACNNNGTC 1 cut(s) 122
PflMI CCANNNNNTGG 1 cut(s) 1060
PkrI GCNGC 6 cut(s) 615, 642, 868, 1081, 1189, 1297
PleI GAGTC 3 cut(s) 302, 343, 1436
PpsI GAGTC 3 cut(s) 302, 343, 1436
Ppu21I YACGTR 1 cut(s) 269
PpuMI RGGWCCY 1 cut(s) 220
Psp124BI GAGCTC 1 cut(s) 66
Psp5II RGGWCCY 1 cut(s) 220
Psp6I CCWGG 2 cut(s) 31, 302
PspEI GGTNACC 1 cut(s) 149
PspGI CCWGG 2 cut(s) 31, 302
PspN4I GGNNCC 1 cut(s) 301
PspPI GGNCC 1 cut(s) 220
PspPPI RGGWCCY 1 cut(s) 220
PstNI CAGNNNCTG 1 cut(s) 869
PsuI RGATCY 1 cut(s) 1459
PsyI GACNNNGTC 1 cut(s) 122
PvuII CAGCTG 1 cut(s) 866
RsaI GTAC 7 cut(s) 38, 108, 492, 759, 861, 1087, 1141
RsaNI GTAC 7 cut(s) 37, 107, 491, 758, 860, 1086, 1140
RseI CAYNNNNRTG 5 cut(s) 665, 1002, 1056, 1218, 1272
SacI GAGCTC 1 cut(s) 66
SalI GTCGAC 2 cut(s) 1007, 1223
SapI GCTCTTC 2 cut(s) 54, 187
SaqAI TTAA 2 cut(s) 750, 1418
SatI GCNGC 6 cut(s) 614, 641, 867, 1080, 1188, 1296
Sau96I GGNCC 1 cut(s) 220
ScaI AGTACT 2 cut(s) 1087, 1141
SchI GAGTC 3 cut(s) 303, 343, 1436
ScrFI CCNGG 4 cut(s) 33, 111, 304, 346
SduI GDGCHC 2 cut(s) 9, 66
SfaNI GCATC 1 cut(s) 669
SfcI CTRYAG 1 cut(s) 367
SfuI TTCGAA 1 cut(s) 1434
SinI GGWCC 1 cut(s) 220
SmiMI CAYNNNNRTG 5 cut(s) 665, 1002, 1056, 1218, 1272
SmlI CTYRAG 9 cut(s) 205, 593, 984, 1035, 1089, 1143, 1197, 1251, 1362
SmoI CTYRAG 9 cut(s) 205, 593, 984, 1035, 1089, 1143, 1197, 1251, 1362
SphI GCATGC 1 cut(s) 707
Sse9I AATT 3 cut(s) 509, 731, 1429
SspI AATATT 1 cut(s) 856
SspMI CTAG 1 cut(s) 533
SstI GAGCTC 1 cut(s) 66
StyD4I CCNGG 4 cut(s) 31, 109, 302, 344
StyI CCWWGG 3 cut(s) 51, 288, 393
TaaI ACNGT 4 cut(s) 149, 283, 1121, 1229
TaiI ACGT 5 cut(s) 12, 126, 271, 759, 903
TaqI TCGA 5 cut(s) 132, 977, 1008, 1224, 1434
TasI AATT 3 cut(s) 509, 731, 1429
TatI WGTACW 2 cut(s) 1085, 1139
TfiI GAWTC 4 cut(s) 1020, 1344, 1436, 1510
Tru1I TTAA 2 cut(s) 750, 1418
Tru9I TTAA 2 cut(s) 750, 1418
TscAI CASTG 3 cut(s) 241, 1354, 1429
TseFI GTSAC 3 cut(s) 149, 1027, 1243
TseI GCWGC 6 cut(s) 613, 640, 866, 1079, 1187, 1295
Tsp45I GTSAC 3 cut(s) 149, 1027, 1243
TspDTI ATGAA 7 cut(s) 220, 431, 792, 1098, 1202, 1206, 1256
TspRI CASTG 3 cut(s) 241, 1354, 1429
Tth111I GACNNNGTC 1 cut(s) 122
Van91I CCANNNNNTGG 1 cut(s) 1060
VpaK11BI GGWCC 1 cut(s) 220
XapI RAATTY 1 cut(s) 509
XceI RCATGY 1 cut(s) 707
XcmI CCANNNNNNNNNTGG 1 cut(s) 168
XmiI GTMKAC 2 cut(s) 1008, 1224
XspI CTAG 1 cut(s) 533
ZrmI AGTACT 2 cut(s) 1087, 1141
Zsp2I ATGCAT 1 cut(s) 842
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.