Rroxscaffold_1G00029360
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000076
Physical Location & Seq
Forward (+)
37881015 .. 37882822
1808 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00029360.1

Sequence Viewer

Length: 1314 bp
ATGGTGGTTTCCAAAAGAATCAGAGCATCATCTTCTTCGCCATTTTTAACAGACCCAGAGGTCATCTTCTTCGCCTTCTTCCATCTTCTTCGCCTTCTTCCAAGTGCGCAGGGGCAACTGCCAAACCTCGCCACCCCTGAATTCGCCCCTGGCGGCGAAAACACTCGACGGCAAGGCCCAGCGGCGATTCGGACTCCGATCGACAAGGCCCAGCTCCGATTCCGATCGACAAGGACCTGCTCCGATTCAGATTCTGATTCCGATCGACAAGGCCCAGCCCCGATTCCGGTCAGCTTCACGACGGAGGCTCCGAGACCCAGCAGAAACAACAACCAACTTTCATTAATGGAGGGTGGCTATGAGCGTTATATGCTTCTTCCGGGGCAAAGATTTTGCCCCATGGAAGATGAGCTACTGATGTATTACCTTAAACCCAAGGTGAATGGAGAGGAGGTACCCGGAAAAGAAGCCCTTATTAGCGAGTTGGATCTTTATGGTGAGGAAGAACCTTGGAATATATGGGAAAGATATGAAGTAAGAAGGGCAAATGACTTGAGAAAGAACAAGGATCTTTACTTCTTTACCAAAAAGAAGAAGGTGAGTGCAAAAGCCTCGCGTATAAGCAGAAAAGTTGGGAGTGGTACATGGAAAGGCCAGGATGCAGCCAAAGAGATATTTCTCCTTGATCAGAATCAGCAGCCAACAACTACTCTTCTTGGTTTCAAGAAAACCTACACCTACAAGAATACGAGCTCTGTGCATCATGGTCGCTGGATCATGTACGAGTTCGAACTGGATGAGTCGCAACTCCTGCACAAGCAGGAACAAGTAAATAAGAATGCATACTCTCTATGTTTACTCAGGAAGAACGATCTACTACCGGAAAAGAAGAAGAGAAAATTAAGGCAAGAAGAAGAGAATCATGAGATGCTCCAAGCGAAGAAAAATGTGCCAGCACCATCATTATTGGATTTCCCTCAGTTAGAAAAATGGTATGATCAACAACAATTCTTGCTGCCAGCTGAACCTCAACCAAGCGAAGAAAATTTGGGGCAACAATGTCAGATACCAACATTATTTTCAGCTAATGAAATAATGAGTGACCAAGATAAAAATCAGTTGCAGCAAATGCCAGCTGAAGAGGGTATCTTGACACCAGGGGAAGTCGATCTGTATGGAGGCAACTTGAGTGATGTTATGGTTGGTGCAAACTGGCCCGACTCTTTTATAGGGGAGCTAGTGAAGGATGACCAGCCATACACCATGGAAGAGGGTGAATGGAATGATTTTCTTGTTCAGATTTTGAGCACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

437

Amino Acids

50.15

Weight (kDa)

5.39

Isoelectric Point (pI)

56.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 127 - 265 5.3e-25 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 59
Acc16I TGCGCA 1 cut(s) 108
Acc36I ACCTGC 1 cut(s) 245
Acc65I GGTACC 1 cut(s) 454
AccB1I GGYRCC 1 cut(s) 454
AccII CGCG 1 cut(s) 616
AciI CCGC 2 cut(s) 153, 182
AclWI GGATC 3 cut(s) 495, 576, 782
AcsI RAATTY 2 cut(s) 140, 1045
AcuI CTGAAG 1 cut(s) 1158
AfaI GTAC 3 cut(s) 456, 643, 782
AfiI CCNNNNNNNGG 1 cut(s) 286
AgsI TTSAA 1 cut(s) 724
AjnI CCWGG 3 cut(s) 148, 654, 1156
AjuI GAANNNNNNNTTGG 2 cut(s) 1063, 1095
AluBI AGCT 8 cut(s) 214, 294, 412, 753, 1022, 1085, 1136, 1237
AluI AGCT 8 cut(s) 214, 294, 412, 753, 1022, 1085, 1136, 1237
Alw21I GWGCWC 2 cut(s) 755, 1310
Alw26I GTCTC 1 cut(s) 307
AlwI GGATC 3 cut(s) 495, 576, 782
AlwNI CAGNNNCTG 1 cut(s) 254
AoxI GGCC 5 cut(s) 175, 207, 271, 652, 1214
ApeKI GCWGC 4 cut(s) 662, 697, 1015, 1123
ApoI RAATTY 2 cut(s) 140, 1045
AseI ATTAAT 1 cut(s) 344
Asp718I GGTACC 1 cut(s) 454
AspLEI GCGC 1 cut(s) 109
AspS9I GGNCC 5 cut(s) 176, 208, 234, 272, 1215
AsuC2I CCSGG 2 cut(s) 381, 459
AsuHPI GGTGA 4 cut(s) 451, 509, 610, 1286
AsuII TTCGAA 1 cut(s) 789
AvaII GGWCC 1 cut(s) 234
BanI GGYRCC 1 cut(s) 454
BanII GRGCYC 1 cut(s) 755
BarI GAAGNNNNNNTAC 2 cut(s) 396, 428
Bbv12I GWGCWC 2 cut(s) 755, 1310
BbvI GCAGC 4 cut(s) 674, 709, 1002, 1135
BccI CCATC 2 cut(s) 90, 967
BceAI ACGGC 1 cut(s) 185
BcgI CGANNNNNNTGC 6 cut(s) 594, 628, 739, 749, 773, 783
BciT130I CCWGG 3 cut(s) 150, 656, 1158
BclI TGATCA 2 cut(s) 685, 997
BcnI CCSGG 2 cut(s) 381, 459
BcoDI GTCTC 1 cut(s) 307
BfaI CTAG 1 cut(s) 1238
BfuAI ACCTGC 1 cut(s) 245
BisI GCNGC 6 cut(s) 154, 183, 663, 698, 1016, 1124
BlsI GCNGC 6 cut(s) 155, 184, 664, 699, 1017, 1125
Bme1390I CCNGG 5 cut(s) 150, 381, 459, 656, 1158
Bme18I GGWCC 1 cut(s) 234
BmgT120I GGNCC 5 cut(s) 176, 208, 234, 272, 1215
BmiI GGNNCC 2 cut(s) 309, 456
BmrFI CCNGG 5 cut(s) 150, 381, 459, 656, 1158
BmsI GCATC 4 cut(s) 35, 649, 769, 918
Bpu14I TTCGAA 1 cut(s) 789
BpuEI CTTGAG 2 cut(s) 574, 1207
BpuMI CCSGG 2 cut(s) 381, 459
BsaBI GATNNNNATC 4 cut(s) 223, 261, 690, 1113
BsaI GGTCTC 1 cut(s) 307
BsaJI CCNNGG 7 cut(s) 148, 380, 399, 435, 509, 1157, 1263
BsaWI WCCGGW 2 cut(s) 286, 880
BsaXI ACNNNNNCTCC 4 cut(s) 292, 322, 438, 468
Bsc4I CCNNNNNNNGG 1 cut(s) 286
Bse1I ACTGG 2 cut(s) 798, 1217
Bse8I GATNNNNATC 4 cut(s) 223, 261, 690, 1113
BseBI CCWGG 3 cut(s) 150, 656, 1158
BseDI CCNNGG 7 cut(s) 148, 380, 399, 435, 509, 1157, 1263
BseGI GGATG 3 cut(s) 664, 802, 1252
BseJI GATNNNNATC 4 cut(s) 223, 261, 690, 1113
BseLI CCNNNNNNNGG 1 cut(s) 286
BseMII CTCAG 2 cut(s) 874, 992
BseNI ACTGG 2 cut(s) 798, 1217
BseRI GAGGAG 1 cut(s) 464
BseXI GCAGC 4 cut(s) 674, 709, 1002, 1135
BseYI CCCAGC 4 cut(s) 178, 210, 274, 317
BsgI GTGCAG 1 cut(s) 797
Bsh1236I CGCG 1 cut(s) 616
Bsh1285I CGRYCG 3 cut(s) 201, 227, 265
BshFI GGCC 5 cut(s) 177, 209, 273, 654, 1216
BshNI GGYRCC 1 cut(s) 454
BsiEI CGRYCG 3 cut(s) 201, 227, 265
BsiHKAI GWGCWC 2 cut(s) 755, 1310
BsiSI CCGG 4 cut(s) 287, 380, 459, 881
BslI CCNNNNNNNGG 1 cut(s) 286
BsmAI GTCTC 1 cut(s) 307
BsmI GAATGC 1 cut(s) 844
BsnI GGCC 5 cut(s) 177, 209, 273, 654, 1216
Bso31I GGTCTC 1 cut(s) 307
Bsp119I TTCGAA 1 cut(s) 789
Bsp1286I GDGCHC 2 cut(s) 755, 1310
Bsp19I CCATGG 2 cut(s) 399, 1263
BspACI CCGC 2 cut(s) 153, 182
BspANI GGCC 5 cut(s) 177, 209, 273, 654, 1216
BspCNI CTCAG 2 cut(s) 873, 991
BspFNI CGCG 1 cut(s) 616
BspHI TCATGA 1 cut(s) 922
BspLI GGNNCC 2 cut(s) 309, 456
BspMI ACCTGC 1 cut(s) 245
BspPI GGATC 3 cut(s) 495, 576, 782
BspT104I TTCGAA 1 cut(s) 789
BspT107I GGYRCC 1 cut(s) 454
BspTNI GGTCTC 1 cut(s) 307
BsrI ACTGG 2 cut(s) 798, 1217
BssECI CCNNGG 7 cut(s) 148, 380, 399, 435, 509, 1157, 1263
BssT1I CCWWGG 4 cut(s) 399, 435, 509, 1263
Bst2UI CCWGG 3 cut(s) 150, 656, 1158
Bst6I CTCTTC 5 cut(s) 717, 887, 909, 1134, 1263
BstAPI GCANNNNNTGC 2 cut(s) 811, 1129
BstBI TTCGAA 1 cut(s) 789
BstC8I GCNNGC 3 cut(s) 954, 1020, 1134
BstDEI CTNAG 3 cut(s) 860, 978, 1311
BstDSI CCRYGG 2 cut(s) 399, 1263
BstF5I GGATG 3 cut(s) 664, 802, 1252
BstFNI CGCG 1 cut(s) 616
BstHHI GCGC 1 cut(s) 109
BstMAI GTCTC 1 cut(s) 307
BstMCI CGRYCG 3 cut(s) 201, 227, 265
BstMWI GCNNNNNNNGC 3 cut(s) 370, 811, 1129
BstNI CCWGG 3 cut(s) 150, 656, 1158
BstSCI CCNGG 5 cut(s) 148, 379, 457, 654, 1156
BstUI CGCG 1 cut(s) 616
BstV1I GCAGC 4 cut(s) 674, 709, 1002, 1135
BstX2I RGATCY 2 cut(s) 487, 568
BstYI RGATCY 2 cut(s) 487, 568
BsuRI GGCC 5 cut(s) 177, 209, 273, 654, 1216
BtgI CCRYGG 2 cut(s) 399, 1263
BtsCI GGATG 3 cut(s) 664, 802, 1252
BveI ACCTGC 1 cut(s) 245
Cac8I GCNNGC 3 cut(s) 954, 1020, 1134
CaiI CAGNNNCTG 1 cut(s) 254
CciI TCATGA 1 cut(s) 922
CfoI GCGC 1 cut(s) 109
Cfr13I GGNCC 5 cut(s) 176, 208, 234, 272, 1215
Csp6I GTAC 3 cut(s) 455, 642, 781
CviAII CATG 6 cut(s) 400, 645, 764, 778, 923, 1264
CviQI GTAC 3 cut(s) 455, 642, 781
DdeI CTNAG 3 cut(s) 860, 978, 1311
DrdI GACNNNNNNGTC 1 cut(s) 59
DseDI GACNNNNNNGTC 1 cut(s) 59
Eam1104I CTCTTC 5 cut(s) 717, 887, 909, 1134, 1263
EarI CTCTTC 5 cut(s) 717, 887, 909, 1134, 1263
Ecl136II GAGCTC 1 cut(s) 753
Eco130I CCWWGG 4 cut(s) 399, 435, 509, 1263
Eco24I GRGCYC 1 cut(s) 755
Eco31I GGTCTC 1 cut(s) 307
Eco47I GGWCC 1 cut(s) 234
Eco53kI GAGCTC 1 cut(s) 753
Eco57I CTGAAG 1 cut(s) 1158
EcoICRI GAGCTC 1 cut(s) 753
EcoO109I RGGNCCY 1 cut(s) 234
EcoRI GAATTC 1 cut(s) 140
EcoRII CCWGG 3 cut(s) 148, 654, 1156
EcoT14I CCWWGG 4 cut(s) 399, 435, 509, 1263
EcoT22I ATGCAT 1 cut(s) 844
EcoT38I GRGCYC 1 cut(s) 755
ErhI CCWWGG 4 cut(s) 399, 435, 509, 1263
FaeI CATG 6 cut(s) 403, 648, 767, 781, 926, 1267
FalI AAGNNNNNCTT 2 cut(s) 456, 488
FatI CATG 6 cut(s) 399, 644, 763, 777, 922, 1263
FbaI TGATCA 2 cut(s) 685, 997
Fnu4HI GCNGC 6 cut(s) 154, 183, 663, 698, 1016, 1124
FokI GGATG 3 cut(s) 671, 809, 1259
FriOI GRGCYC 1 cut(s) 755
Fsp4HI GCNGC 6 cut(s) 154, 183, 663, 698, 1016, 1124
FspBI CTAG 1 cut(s) 1238
FspI TGCGCA 1 cut(s) 108
GlaI GCGC 1 cut(s) 108
GluI GCNGC 6 cut(s) 154, 183, 663, 698, 1016, 1124
GsaI CCCAGC 4 cut(s) 182, 214, 278, 321
HaeIII GGCC 5 cut(s) 177, 209, 273, 654, 1216
HapII CCGG 4 cut(s) 287, 380, 459, 881
HhaI GCGC 1 cut(s) 109
Hin1II CATG 6 cut(s) 403, 648, 767, 781, 926, 1267
Hin6I GCGC 1 cut(s) 107
HinP1I GCGC 1 cut(s) 107
HpaII CCGG 4 cut(s) 287, 380, 459, 881
HphI GGTGA 4 cut(s) 451, 509, 610, 1286
Hpy166II GTNNAC 1 cut(s) 857
Hpy188III TCNNGA 5 cut(s) 298, 724, 862, 923, 1150
Hpy8I GTNNAC 1 cut(s) 857
Hpy99I CGWCG 2 cut(s) 171, 304
HpyAV CCTTC 5 cut(s) 85, 104, 534, 589, 1237
HpyCH4V TGCA 7 cut(s) 605, 662, 760, 814, 842, 1123, 1208
HpyF10VI GCNNNNNNNGC 3 cut(s) 370, 811, 1129
HpyF3I CTNAG 3 cut(s) 860, 978, 1311
Hsp92II CATG 6 cut(s) 403, 648, 767, 781, 926, 1267
HspAI GCGC 1 cut(s) 107
KpnI GGTACC 1 cut(s) 458
Ksp22I TGATCA 2 cut(s) 685, 997
LmnI GCTCC 5 cut(s) 219, 245, 313, 936, 1234
Lsp1109I GCAGC 4 cut(s) 674, 709, 1002, 1135
LweI GCATC 4 cut(s) 35, 649, 769, 918
MaeI CTAG 1 cut(s) 1238
MaeIII GTNAC 1 cut(s) 1100
MflI RGATCY 2 cut(s) 487, 568
MhlI GDGCHC 2 cut(s) 755, 1310
MluCI AATT 4 cut(s) 140, 899, 1007, 1045
MlyI GAGTC 3 cut(s) 187, 809, 1214
MmeI TCCRAC 1 cut(s) 465
Mph1103I ATGCAT 1 cut(s) 844
MseI TTAA 4 cut(s) 47, 344, 429, 902
MspA1I CMGCKG 3 cut(s) 182, 1022, 1136
MspI CCGG 4 cut(s) 287, 380, 459, 881
MspR9I CCNGG 5 cut(s) 150, 381, 459, 656, 1158
Mva1269I GAATGC 1 cut(s) 844
MvaI CCWGG 3 cut(s) 150, 656, 1158
MvnI CGCG 1 cut(s) 616
MwoI GCNNNNNNNGC 3 cut(s) 370, 811, 1129
NciI CCSGG 2 cut(s) 381, 459
NcoI CCATGG 2 cut(s) 399, 1263
NlaIII CATG 6 cut(s) 403, 648, 767, 781, 926, 1267
NlaIV GGNNCC 2 cut(s) 309, 456
NmuCI GTSAC 1 cut(s) 1100
NsbI TGCGCA 1 cut(s) 108
NsiI ATGCAT 1 cut(s) 844
NspV TTCGAA 1 cut(s) 789
PagI TCATGA 1 cut(s) 922
PcsI WCGNNNNNNNCGW 1 cut(s) 308
PctI GAATGC 1 cut(s) 844
PfeI GAWTC 9 cut(s) 18, 187, 219, 245, 251, 257, 283, 691, 919
PkrI GCNGC 6 cut(s) 155, 184, 664, 699, 1017, 1125
Ple19I CGATCG 3 cut(s) 201, 227, 265
PleI GAGTC 3 cut(s) 187, 808, 1214
PpsI GAGTC 3 cut(s) 187, 808, 1214
PpuMI RGGWCCY 1 cut(s) 234
PshBI ATTAAT 1 cut(s) 344
Psp124BI GAGCTC 1 cut(s) 755
Psp5II RGGWCCY 1 cut(s) 234
Psp6I CCWGG 3 cut(s) 148, 654, 1156
PspFI CCCAGC 4 cut(s) 178, 210, 274, 317
PspGI CCWGG 3 cut(s) 148, 654, 1156
PspN4I GGNNCC 2 cut(s) 309, 456
PspPI GGNCC 5 cut(s) 176, 208, 234, 272, 1215
PspPPI RGGWCCY 1 cut(s) 234
PstNI CAGNNNCTG 1 cut(s) 254
PsuI RGATCY 2 cut(s) 487, 568
PvuI CGATCG 3 cut(s) 201, 227, 265
PvuII CAGCTG 2 cut(s) 1022, 1136
RsaI GTAC 3 cut(s) 456, 643, 782
RsaNI GTAC 3 cut(s) 455, 642, 781
SacI GAGCTC 1 cut(s) 755
SaqAI TTAA 4 cut(s) 47, 344, 429, 902
SatI GCNGC 6 cut(s) 154, 183, 663, 698, 1016, 1124
Sau96I GGNCC 5 cut(s) 176, 208, 234, 272, 1215
SchI GAGTC 3 cut(s) 187, 809, 1214
ScrFI CCNGG 5 cut(s) 150, 381, 459, 656, 1158
SduI GDGCHC 2 cut(s) 755, 1310
SfaNI GCATC 4 cut(s) 35, 649, 769, 918
SfuI TTCGAA 1 cut(s) 789
SinI GGWCC 1 cut(s) 234
SmlI CTYRAG 2 cut(s) 553, 1186
SmoI CTYRAG 2 cut(s) 553, 1186
Sse9I AATT 4 cut(s) 140, 899, 1007, 1045
SsiI CCGC 2 cut(s) 153, 182
SspMI CTAG 1 cut(s) 1238
SstI GAGCTC 1 cut(s) 755
StyD4I CCNGG 5 cut(s) 148, 379, 457, 654, 1156
StyI CCWWGG 4 cut(s) 399, 435, 509, 1263
TaqI TCGA 6 cut(s) 166, 201, 227, 265, 789, 1167
TasI AATT 4 cut(s) 140, 899, 1007, 1045
TauI GCSGC 2 cut(s) 156, 185
TfiI GAWTC 9 cut(s) 18, 187, 219, 245, 251, 257, 283, 691, 919
Tru1I TTAA 4 cut(s) 47, 344, 429, 902
Tru9I TTAA 4 cut(s) 47, 344, 429, 902
TseFI GTSAC 1 cut(s) 1100
TseI GCWGC 4 cut(s) 662, 697, 1015, 1123
Tsp45I GTSAC 1 cut(s) 1100
TspDTI ATGAA 3 cut(s) 330, 546, 1104
TspGWI ACGGA 1 cut(s) 317
VpaK11BI GGWCC 1 cut(s) 234
VspI ATTAAT 1 cut(s) 344
XapI RAATTY 2 cut(s) 140, 1045
XspI CTAG 1 cut(s) 1238
Zsp2I ATGCAT 1 cut(s) 844
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.