Rorug01G0127200
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000076
Physical Location & Seq
Forward (+)
21678734 .. 21685659
6926 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0127200.1

Sequence Viewer

Length: 1833 bp
ATGTCAGTGACACTTGCCCCATTTTCCCGAAAAATCTCTGCTTTTTTCCTCAATTGGGGGTTTTTGATTGTTGCGGGTTCTGTGATTTTTGTGGGCTTTGTTGGGTTCTTGATGGGTTGTAAAGGTAAGTCGAGCTTGAAGAGCAGGGACCAGGAGTACTATTTCTTCAGTGCATTGGACAAGAAGTACGGAAATGGGGCAAGGATGAATAGGGCTACACATCTAGGGTACTGGAAGGCCACTGGAAATGACAGGCCTGTCAAGCACAACAATAAGACTGTTGGGATGAAGAAAACTTTGGTTTTTCATAGTGGCAGAGCTCCAGATGGCAAGAGGACTAATTGGGTCATGCATGAGTATAGGCTTGTTGATACGGAAATGGAAAAACCTGGAAATGGTGTTCCTCAGGATGCGTATGTGTTGTGTAGGGTATTTCATAAAAGTAATATAGGACCACCAAATGGGCATCGATATGCGCCTTTTGTTGAGGAGGAATGGGATGATGAAAAGTTAACTTTCGTTCCTGGAGAAGTGGCTAGGGATGACACAGTAGTCGGTCGTGATTCCGTTGGAAATCGTTGCGATGCAGTTAAGGTAGGAAATGATCATGATTCCGTTGTTGGAGGACATCATCGGGATGTACCTATGGTAGGAAATGGTCATGATTCAGTTGTTGGAGGAAATCATGGCAATATAGCTATGGCAGGAAATGGTCATGATTCAGTTGTTGGAGGAAATCGTCGCGATGTAGTTGTGATAGGAAATGGTCATGATTCAGTTGTCGGAGGTGCTACTCGTGATGCAGTTGTAGCAAATGGTTGTCATGCAGTTGTTGTAGCAAATGGTCGTGATACAGTTGTTGGAAATGGTTGTCATGCAGCTGTTGGAGGAAATGGTCATGCTGCTGCCTGTATTGAAGAAAAAGTTCATGCTGCTGTGGATATTGATCAAAAAGATCATGTTGCGGCAGTTGTTGAACAAAAAGATAATGCGTCTGCAAGTATTGAACAAAAAGATCATGATGTCTGTCTTGGAGGCGGCCCTTCTGTTGATGGACATGTTCAGGACACTATGATGGAAGTAGATGGTCATGGAACTACTGAGGAAGGAAATGTTCATGGAAGCAATAGAGGAAATGGTCATGACGGGCGCAACGCAGGGAACTATTTTGTGCAGGATACTCAGACAATCAGCAATGCTCTTCTTAGTGCTACTGAACTTCCAAAAGACAGTCAAACGGTTTTAGTGCCATGCAAAAGAGAGAAATTGGATGATGATCCAATGACATGTGTAGTTAATCGAGAAGAGAGATTGGATGATTACCCATCACCGCTTGGAGATGATCCACAACCCCTGCTATCACTGTTTAATCAGCAGCCTGGTATACTACGCCAATATAAAAGGAGGAGGCATAATGAATCAAATTCAAACCGTTCAAATGCCTCAGAGATTTCAAGTGGGTTGACTCATGATCCTTGCTCATCTACAACAACGACAGCGTCAACAGAGACTTCGGTGACGGCAACAACAAAAAGAAATTTTCTGTCTGCATTGGTGGAATTTCAACTGTTAGAATCCCTTGAACCCAAGGATAAGACTCCGGTAGCTCCACCTGAATTTAATGCTGCTCTGCATAATTCATCTGTGCCTTCTAGCTGCTTGAAATTCATAGAGAGTTTGCAAAACGAGATTCACAAGATTTCGATTGAGAAGGAGACATTGAAATTTGAAATGCTGAGTGCCCAAGCTGTGATTAACATTCTTCAATCTAGAATTGATCTTCTGAACAAGGAGAATGAGGATCTGAAGAGGAATGCCCGAGAGGCTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

610

Amino Acids

66.2

Weight (kDa)

5.98

Isoelectric Point (pI)

40.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 47 - 122 5.6e-24 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 257, 551
AccB7I CCANNNNNTGG 1 cut(s) 461
AccI GTMKAC 1 cut(s) 1384
AccII CGCG 1 cut(s) 744
AciI CCGC 4 cut(s) 74, 965, 1038, 1331
AclWI GGATC 4 cut(s) 1271, 1337, 1466, 1809
AcsI RAATTY 6 cut(s) 1423, 1537, 1559, 1616, 1664, 1724
AcuI CTGAAG 2 cut(s) 151, 1826
AfaI GTAC 4 cut(s) 158, 188, 230, 642
AfiI CCNNNNNNNGG 4 cut(s) 55, 395, 461, 650
AflIII ACRYGT 2 cut(s) 1057, 1286
AjnI CCWGG 4 cut(s) 150, 388, 523, 1378
AjuI GAANNNNNNNTTGG 2 cut(s) 281, 313
AloI GAACNNNNNNTCC 2 cut(s) 384, 416
AluBI AGCT 7 cut(s) 135, 320, 698, 881, 1607, 1656, 1748
AluI AGCT 7 cut(s) 135, 320, 698, 881, 1607, 1656, 1748
Alw21I GWGCWC 1 cut(s) 322
Alw26I GTCTC 2 cut(s) 1502, 1709
AlwI GGATC 4 cut(s) 1271, 1337, 1466, 1809
Ama87I CYCGRG 1 cut(s) 1818
AoxI GGCC 3 cut(s) 237, 254, 1039
ApeKI GCWGC 7 cut(s) 878, 902, 905, 932, 1375, 1625, 1656
ApoI RAATTY 6 cut(s) 1423, 1537, 1559, 1616, 1664, 1724
Asp700I GAANNNNTTC 1 cut(s) 924
AspLEI GCGC 2 cut(s) 478, 1152
AspS9I GGNCC 3 cut(s) 148, 452, 1040
AsuHPI GGTGA 2 cut(s) 1320, 1528
AvaI CYCGRG 1 cut(s) 1818
AvaII GGWCC 2 cut(s) 148, 452
AxyI CCTNAGG 1 cut(s) 405
BaeGI GKGCMC 1 cut(s) 1744
BaeI ACNNNNGTAYC 2 cut(s) 843, 876
BanII GRGCYC 1 cut(s) 322
BarI GAAGNNNNNNTAC 2 cut(s) 149, 181
BauI CACGAG 1 cut(s) 795
Bbv12I GWGCWC 1 cut(s) 322
BbvI GCAGC 7 cut(s) 889, 890, 892, 919, 1387, 1612, 1643
BccI CCATC 6 cut(s) 106, 320, 1046, 1069, 1079, 1333
BceAI ACGGC 1 cut(s) 1536
BciT130I CCWGG 4 cut(s) 152, 390, 525, 1380
BciVI GTATCC 1 cut(s) 1171
BclI TGATCA 2 cut(s) 604, 946
BcoDI GTCTC 2 cut(s) 1502, 1709
BfaI CTAG 4 cut(s) 224, 537, 1653, 1770
BfuI GTATCC 1 cut(s) 1171
BglI GCCNNNNNGGC 1 cut(s) 1823
BisI GCNGC 9 cut(s) 879, 903, 906, 933, 966, 1039, 1376, 1626, 1657
BlsI GCNGC 9 cut(s) 880, 904, 907, 934, 967, 1040, 1377, 1627, 1658
BmcAI AGTACT 1 cut(s) 158
Bme1390I CCNGG 4 cut(s) 152, 390, 525, 1380
Bme18I GGWCC 2 cut(s) 148, 452
BmeT110I CYCGRG 1 cut(s) 1818
BmgT120I GGNCC 3 cut(s) 148, 452, 1040
BmiI GGNNCC 1 cut(s) 149
BmrFI CCNGG 4 cut(s) 152, 390, 525, 1380
BmsI GCATC 4 cut(s) 400, 475, 574, 790
BpmI CTGGAG 2 cut(s) 306, 546
Bsa29I ATCGAT 1 cut(s) 469
BsaBI GATNNNNATC 2 cut(s) 945, 1275
BsaJI CCNNGG 1 cut(s) 1587
BsaWI WCCGGW 1 cut(s) 1600
Bsc4I CCNNNNNNNGG 4 cut(s) 55, 395, 461, 650
Bse1I ACTGG 2 cut(s) 236, 247
Bse21I CCTNAGG 1 cut(s) 405
Bse3DI GCAATG 1 cut(s) 1201
Bse8I GATNNNNATC 2 cut(s) 945, 1275
BseBI CCWGG 4 cut(s) 152, 390, 525, 1380
BseCI ATCGAT 1 cut(s) 469
BseDI CCNNGG 1 cut(s) 1587
BseGI GGATG 8 cut(s) 210, 291, 415, 505, 547, 643, 1276, 1321
BseJI GATNNNNATC 2 cut(s) 945, 1275
BseLI CCNNNNNNNGG 4 cut(s) 55, 395, 461, 650
BseMI GCAATG 1 cut(s) 1201
BseMII CTCAG 6 cut(s) 419, 1092, 1196, 1458, 1727, 1818
BseNI ACTGG 2 cut(s) 236, 247
BseRI GAGGAG 2 cut(s) 503, 1420
BseSI GKGCMC 1 cut(s) 1744
BseXI GCAGC 7 cut(s) 889, 890, 892, 919, 1387, 1612, 1643
BsgI GTGCAG 1 cut(s) 1193
Bsh1236I CGCG 1 cut(s) 744
Bsh1285I CGRYCG 1 cut(s) 559
BshFI GGCC 3 cut(s) 239, 256, 1041
BshVI ATCGAT 1 cut(s) 469
BsiEI CGRYCG 1 cut(s) 559
BsiHKAI GWGCWC 1 cut(s) 322
BsiHKCI CYCGRG 1 cut(s) 1818
BsiSI CCGG 1 cut(s) 1601
BslFI GGGAC 1 cut(s) 161
BslI CCNNNNNNNGG 4 cut(s) 55, 395, 461, 650
BsmAI GTCTC 2 cut(s) 1502, 1709
BsmFI GGGAC 1 cut(s) 161
BsmI GAATGC 1 cut(s) 1819
BsnI GGCC 3 cut(s) 239, 256, 1041
BsoBI CYCGRG 1 cut(s) 1818
Bsp1286I GDGCHC 2 cut(s) 322, 1744
Bsp143I GATC 9 cut(s) 604, 946, 955, 1015, 1276, 1342, 1471, 1777, 1801
Bsp68I TCGCGA 1 cut(s) 744
BspACI CCGC 4 cut(s) 74, 965, 1038, 1331
BspANI GGCC 3 cut(s) 239, 256, 1041
BspCNI CTCAG 6 cut(s) 418, 1093, 1195, 1457, 1728, 1819
BspDI ATCGAT 1 cut(s) 469
BspFNI CGCG 1 cut(s) 744
BspHI TCATGA 7 cut(s) 607, 661, 715, 769, 1018, 1141, 1468
BspLI GGNNCC 1 cut(s) 149
BspPI GGATC 4 cut(s) 1271, 1337, 1466, 1809
BspQI GCTCTTC 2 cut(s) 134, 1206
BsrDI GCAATG 1 cut(s) 1201
BsrI ACTGG 2 cut(s) 236, 247
BssECI CCNNGG 1 cut(s) 1587
BssMI GATC 9 cut(s) 604, 946, 955, 1015, 1276, 1342, 1471, 1777, 1801
BssNAI GTATAC 1 cut(s) 1385
BssSI CACGAG 1 cut(s) 795
BssT1I CCWWGG 1 cut(s) 1587
Bst1107I GTATAC 1 cut(s) 1385
Bst2BI CACGAG 1 cut(s) 795
Bst2UI CCWGG 4 cut(s) 152, 390, 525, 1380
Bst4CI ACNGT 8 cut(s) 280, 550, 856, 1232, 1240, 1365, 1433, 1569
Bst6I CTCTTC 4 cut(s) 134, 1206, 1299, 1802
BstDEI CTNAG 7 cut(s) 405, 1101, 1182, 1205, 1444, 1736, 1827
BstENI CCTNNNNNAGG 1 cut(s) 648
BstF5I GGATG 8 cut(s) 210, 291, 415, 505, 547, 643, 1276, 1321
BstFNI CGCG 1 cut(s) 744
BstHHI GCGC 2 cut(s) 478, 1152
BstKTI GATC 9 cut(s) 607, 949, 958, 1018, 1279, 1345, 1474, 1780, 1804
BstMAI GTCTC 2 cut(s) 1502, 1709
BstMBI GATC 9 cut(s) 604, 946, 955, 1015, 1276, 1342, 1471, 1777, 1801
BstMCI CGRYCG 1 cut(s) 559
BstMWI GCNNNNNNNGC 4 cut(s) 141, 262, 809, 1823
BstNI CCWGG 4 cut(s) 152, 390, 525, 1380
BstNSI RCATGY 2 cut(s) 1061, 1290
BstSCI CCNGG 4 cut(s) 150, 388, 523, 1378
BstSLI GKGCMC 1 cut(s) 1744
BstUI CGCG 1 cut(s) 744
BstV1I GCAGC 7 cut(s) 889, 890, 892, 919, 1387, 1612, 1643
BstX2I RGATCY 1 cut(s) 1801
BstYI RGATCY 1 cut(s) 1801
BstZ17I GTATAC 1 cut(s) 1385
Bsu15I ATCGAT 1 cut(s) 469
Bsu36I CCTNAGG 1 cut(s) 405
BsuI GTATCC 1 cut(s) 1171
BsuRI GGCC 3 cut(s) 239, 256, 1041
BsuTUI ATCGAT 1 cut(s) 469
BtgZI GCGATG 2 cut(s) 597, 759
BtsCI GGATG 8 cut(s) 210, 291, 415, 505, 547, 643, 1276, 1321
BtsIMutI CAGTG 4 cut(s) 12, 175, 240, 1361
BtuMI TCGCGA 1 cut(s) 744
CciI TCATGA 7 cut(s) 607, 661, 715, 769, 1018, 1141, 1468
CfoI GCGC 2 cut(s) 478, 1152
Cfr13I GGNCC 3 cut(s) 148, 452, 1040
ClaI ATCGAT 1 cut(s) 469
CseI GACGC 2 cut(s) 981, 1488
Csp6I GTAC 4 cut(s) 157, 187, 229, 641
CviQI GTAC 4 cut(s) 157, 187, 229, 641
DdeI CTNAG 7 cut(s) 405, 1101, 1182, 1205, 1444, 1736, 1827
DpnI GATC 9 cut(s) 606, 948, 957, 1017, 1278, 1344, 1473, 1779, 1803
DpnII GATC 9 cut(s) 604, 946, 955, 1015, 1276, 1342, 1471, 1777, 1801
DrdI GACNNNNNNGTC 2 cut(s) 257, 551
DseDI GACNNNNNNGTC 2 cut(s) 257, 551
Eam1104I CTCTTC 4 cut(s) 134, 1206, 1299, 1802
EarI CTCTTC 4 cut(s) 134, 1206, 1299, 1802
Ecl136II GAGCTC 1 cut(s) 320
Eco130I CCWWGG 1 cut(s) 1587
Eco147I AGGCCT 1 cut(s) 256
Eco24I GRGCYC 1 cut(s) 322
Eco47I GGWCC 2 cut(s) 148, 452
Eco53kI GAGCTC 1 cut(s) 320
Eco57I CTGAAG 2 cut(s) 151, 1826
Eco81I CCTNAGG 1 cut(s) 405
Eco88I CYCGRG 1 cut(s) 1818
EcoICRI GAGCTC 1 cut(s) 320
EcoNI CCTNNNNNAGG 1 cut(s) 648
EcoRII CCWGG 4 cut(s) 150, 388, 523, 1378
EcoT14I CCWWGG 1 cut(s) 1587
EcoT22I ATGCAT 1 cut(s) 354
EcoT38I GRGCYC 1 cut(s) 322
ErhI CCWWGG 1 cut(s) 1587
FalI AAGNNNNNCTT 2 cut(s) 119, 151
FaqI GGGAC 1 cut(s) 161
FauI CCCGC 1 cut(s) 67
FbaI TGATCA 2 cut(s) 604, 946
FblI GTMKAC 1 cut(s) 1384
Fnu4HI GCNGC 9 cut(s) 879, 903, 906, 933, 966, 1039, 1376, 1626, 1657
FokI GGATG 8 cut(s) 217, 298, 422, 512, 554, 650, 1283, 1328
FriOI GRGCYC 1 cut(s) 322
Fsp4HI GCNGC 9 cut(s) 879, 903, 906, 933, 966, 1039, 1376, 1626, 1657
FspBI CTAG 4 cut(s) 224, 537, 1653, 1770
GlaI GCGC 2 cut(s) 477, 1151
GluI GCNGC 9 cut(s) 879, 903, 906, 933, 966, 1039, 1376, 1626, 1657
GsuI CTGGAG 2 cut(s) 306, 546
HaeIII GGCC 3 cut(s) 239, 256, 1041
HapII CCGG 1 cut(s) 1601
HgaI GACGC 2 cut(s) 981, 1488
HhaI GCGC 2 cut(s) 478, 1152
Hin6I GCGC 2 cut(s) 476, 1150
HinP1I GCGC 2 cut(s) 476, 1150
HincII GTYRAC 3 cut(s) 513, 1464, 1503
HindII GTYRAC 3 cut(s) 513, 1464, 1503
HpaI GTTAAC 1 cut(s) 513
HpaII CCGG 1 cut(s) 1601
HphI GGTGA 2 cut(s) 1320, 1528
Hpy166II GTNNAC 4 cut(s) 513, 1385, 1464, 1503
Hpy188I TCNGA 5 cut(s) 785, 1185, 1447, 1785, 1806
Hpy8I GTNNAC 4 cut(s) 513, 1385, 1464, 1503
Hpy99I CGWCG 1 cut(s) 744
HpyAV CCTTC 5 cut(s) 229, 1053, 1100, 1659, 1705
HpyCH4III ACNGT 8 cut(s) 280, 550, 856, 1232, 1240, 1365, 1433, 1569
HpyF10VI GCNNNNNNNGC 4 cut(s) 141, 262, 809, 1823
HpyF3I CTNAG 7 cut(s) 405, 1101, 1182, 1205, 1444, 1736, 1827
HspAI GCGC 2 cut(s) 476, 1150
Ksp22I TGATCA 2 cut(s) 604, 946
KspAI GTTAAC 1 cut(s) 513
Kzo9I GATC 9 cut(s) 604, 946, 955, 1015, 1276, 1342, 1471, 1777, 1801
LguI GCTCTTC 2 cut(s) 134, 1206
LmnI GCTCC 2 cut(s) 325, 1612
Lsp1109I GCAGC 7 cut(s) 889, 890, 892, 919, 1387, 1612, 1643
LweI GCATC 4 cut(s) 400, 475, 574, 790
MaeI CTAG 4 cut(s) 224, 537, 1653, 1770
MaeIII GTNAC 2 cut(s) 7, 1516
MalI GATC 9 cut(s) 606, 948, 957, 1017, 1278, 1344, 1473, 1779, 1803
MboI GATC 9 cut(s) 604, 946, 955, 1015, 1276, 1342, 1471, 1777, 1801
MboII GAAGA 9 cut(s) 151, 157, 301, 929, 1193, 1316, 1754, 1772, 1819
MfeI CAATTG 1 cut(s) 52
MflI RGATCY 1 cut(s) 1801
MhlI GDGCHC 2 cut(s) 322, 1744
MlyI GAGTC 2 cut(s) 1459, 1591
MmeI TCCRAC 7 cut(s) 550, 601, 655, 709, 763, 841, 865
Mph1103I ATGCAT 1 cut(s) 354
MroXI GAANNNNTTC 1 cut(s) 924
MseI TTAA 6 cut(s) 512, 591, 1296, 1368, 1620, 1755
MslI CAYNNNNRTG 3 cut(s) 471, 636, 1073
MspA1I CMGCKG 1 cut(s) 881
MspI CCGG 1 cut(s) 1601
MspR9I CCNGG 4 cut(s) 152, 390, 525, 1380
MunI CAATTG 1 cut(s) 52
Mva1269I GAATGC 1 cut(s) 1819
MvaI CCWGG 4 cut(s) 152, 390, 525, 1380
MvnI CGCG 1 cut(s) 744
MwoI GCNNNNNNNGC 4 cut(s) 141, 262, 809, 1823
NdeII GATC 9 cut(s) 604, 946, 955, 1015, 1276, 1342, 1471, 1777, 1801
NlaIV GGNNCC 1 cut(s) 149
NmuCI GTSAC 2 cut(s) 7, 1516
NruI TCGCGA 1 cut(s) 744
NsiI ATGCAT 1 cut(s) 354
NspI RCATGY 2 cut(s) 1061, 1290
PagI TCATGA 7 cut(s) 607, 661, 715, 769, 1018, 1141, 1468
PceI AGGCCT 1 cut(s) 256
PciI ACATGT 2 cut(s) 1057, 1286
PciSI GCTCTTC 2 cut(s) 134, 1206
PctI GAATGC 1 cut(s) 1819
PdmI GAANNNNTTC 1 cut(s) 924
PfeI GAWTC 8 cut(s) 563, 611, 665, 719, 773, 1418, 1574, 1690
PflFI GACNNNGTC 1 cut(s) 1498
PflMI CCANNNNNTGG 1 cut(s) 461
PfoI TCCNGGA 1 cut(s) 523
PkrI GCNGC 9 cut(s) 880, 904, 907, 934, 967, 1040, 1377, 1627, 1658
PleI GAGTC 2 cut(s) 1459, 1591
PpsI GAGTC 2 cut(s) 1459, 1591
PscI ACATGT 2 cut(s) 1057, 1286
Psp124BI GAGCTC 1 cut(s) 322
Psp6I CCWGG 4 cut(s) 150, 388, 523, 1378
PspGI CCWGG 4 cut(s) 150, 388, 523, 1378
PspN4I GGNNCC 1 cut(s) 149
PspPI GGNCC 3 cut(s) 148, 452, 1040
PsuI RGATCY 1 cut(s) 1801
PsyI GACNNNGTC 1 cut(s) 1498
PvuII CAGCTG 1 cut(s) 881
RruI TCGCGA 1 cut(s) 744
RsaI GTAC 4 cut(s) 158, 188, 230, 642
RsaNI GTAC 4 cut(s) 157, 187, 229, 641
RseI CAYNNNNRTG 3 cut(s) 471, 636, 1073
SacI GAGCTC 1 cut(s) 322
SapI GCTCTTC 2 cut(s) 134, 1206
SaqAI TTAA 6 cut(s) 512, 591, 1296, 1368, 1620, 1755
SatI GCNGC 9 cut(s) 879, 903, 906, 933, 966, 1039, 1376, 1626, 1657
Sau3AI GATC 9 cut(s) 604, 946, 955, 1015, 1276, 1342, 1471, 1777, 1801
Sau96I GGNCC 3 cut(s) 148, 452, 1040
ScaI AGTACT 1 cut(s) 158
SchI GAGTC 2 cut(s) 1459, 1591
ScrFI CCNGG 4 cut(s) 152, 390, 525, 1380
SduI GDGCHC 2 cut(s) 322, 1744
SfaNI GCATC 4 cut(s) 400, 475, 574, 790
SinI GGWCC 2 cut(s) 148, 452
SmiMI CAYNNNNRTG 3 cut(s) 471, 636, 1073
SseBI AGGCCT 1 cut(s) 256
SsiI CCGC 4 cut(s) 74, 965, 1038, 1331
SspMI CTAG 4 cut(s) 224, 537, 1653, 1770
SstI GAGCTC 1 cut(s) 322
StuI AGGCCT 1 cut(s) 256
StyD4I CCNGG 4 cut(s) 150, 388, 523, 1378
StyI CCWWGG 1 cut(s) 1587
TaaI ACNGT 8 cut(s) 280, 550, 856, 1232, 1240, 1365, 1433, 1569
TaqI TCGA 4 cut(s) 131, 469, 1300, 1703
TaqII GACCGA 1 cut(s) 545
TatI WGTACW 1 cut(s) 156
TauI GCSGC 2 cut(s) 968, 1041
TfiI GAWTC 8 cut(s) 563, 611, 665, 719, 773, 1418, 1574, 1690
Tru1I TTAA 6 cut(s) 512, 591, 1296, 1368, 1620, 1755
Tru9I TTAA 6 cut(s) 512, 591, 1296, 1368, 1620, 1755
TscAI CASTG 4 cut(s) 12, 175, 247, 1368
TseFI GTSAC 2 cut(s) 7, 1516
TseI GCWGC 7 cut(s) 878, 902, 905, 932, 1375, 1625, 1656
Tsp45I GTSAC 2 cut(s) 7, 1516
TspGWI ACGGA 4 cut(s) 204, 389, 556, 604
TspRI CASTG 4 cut(s) 12, 175, 247, 1368
Tth111I GACNNNGTC 1 cut(s) 1498
Van91I CCANNNNNTGG 1 cut(s) 461
VpaK11BI GGWCC 2 cut(s) 148, 452
XagI CCTNNNNNAGG 1 cut(s) 648
XapI RAATTY 6 cut(s) 1423, 1537, 1559, 1616, 1664, 1724
XbaI TCTAGA 1 cut(s) 1769
XceI RCATGY 2 cut(s) 1061, 1290
XmiI GTMKAC 1 cut(s) 1384
XmnI GAANNNNTTC 1 cut(s) 924
XspI CTAG 4 cut(s) 224, 537, 1653, 1770
ZrmI AGTACT 1 cut(s) 158
Zsp2I ATGCAT 1 cut(s) 354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.