Rmu_sc0008328.1_g000002
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008328.1
OG0000076
Physical Location & Seq
Forward (+)
5598 .. 11168
5571 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008328.1_g000002.1.cds

Sequence Viewer

Length: 1854 bp
atggatatccatgaggatggtaatgaattacatgacgagcatcagcttcttccgggctacaggttctgccccttggaggaggaactaatcctccgctatctatgtcccaaggtcaaaggagaagaggtacccggtgaagactatttgattttcaactccaatttgtacggtgaacaagagccttgggacatatgggacatgtacaaagaaagaagaaagaacgacttgaggttcaacaaagatctctacttcttcactcaacgaaagaagatgactgtgaatgcctcccggaagggccgatctatcggaagcggcacctggaaagggggggacgctgccaagaacgtatacgcaagtggcattgttgtaggttacaggaaaagatttacttatgagaaaaaggggtccgagcaacatggcagatggatcatgctcgagttcgaacttgatcactcgcaagtaggcatgcttgaccaacaagaggcacaaaaatatgttctatgcatccttaggaaaaatgagggatccaaagagaaaaggaaacgggttgatgatgacgaccgggagaagcttgcaaccggagatgatgtccccgatgattgtcaagcactggatggatataagaatatgaaacaagaggaatccgaaattaaacaaggagaggaagatcaacttatgcatgcaattaccggagatgtccgcgatgctggcccatcattatcttctgaactgcaaggggaagaaaactgttgggtgcaatacctgagccctatactattagttcacgatgactatgtgctgccaccatatgcagatgccttgcagtgggaagaagaaaattatttgggtaaacaatccactgtgccaggcttcgaggacaatgtgcaaccatttctagtagctgatcatgaactgcaaaggaaagcagaaaattgtggaaagcaatgcctagaacataggccattggtgccaccatttacagctgattgcgaaataatgatccacatgctaggggcagagaattatttgtcgaaacagtgccctgtgcaatgcatctactgtgactttgacgtacaaccatttgcagcagctgacgaactgagtaatatctacatgttgggggaagagcatcctgttccaagagtagctgaacaagagggtagtagcttgaaagagaaacaaaatgcaagcatggtcagtacttcaactgatcatcagcctgacatggttgcctcgaaaagtacttcaactgatcatcatcgagctgatgatcctataggaagcaacgatgttgatgaagggttggctgcaggtactcatggtttcaaatataacccttggatactatctttttcagaggagctgctacgtggggctcgatcaaaatctaagcaccgagaaccggcagaaccggaccgaatcgaaccggaaccggcggttcggtcgcccacgacgtcggctctcaccatcgctgcgtcgaaactcgtcgtctttctctccgcggccaggctcgacaccaagctgacggtcctcgtcactgagaagttcagcgaggccgggttggaccttatgaaggaatcaacaaccgccagtagaatcgggtatgtcttcgatttgcttctgtctctctcaccgacgactgatcatcacggaaatcgcaacttgattgtatctccggtcccgggctgcaaccggagtcattgcaatcggagtcaaatcagtgtgaaggcaaacgttttgacgtcgtccgagacctgcaagcgaagcccagactcgattctgacttggagcttcggagcttcccggacatctgataaacaaaactggcgaagcccagacctgattccggcgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

617

Amino Acids

69.7

Weight (kDa)

5.15

Isoelectric Point (pI)

51.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 1457, 1745
Acc36I ACCTGC 2 cut(s) 1301, 1763
Acc65I GGTACC 1 cut(s) 127
AccB1I GGYRCC 3 cut(s) 127, 314, 967
AccI GTMKAC 1 cut(s) 348
AccII CGCG 2 cut(s) 702, 1502
AciI CCGC 7 cut(s) 94, 312, 700, 1436, 1500, 1502, 1587
AclI AACGTT 1 cut(s) 1734
AclWI GGATC 5 cut(s) 434, 519, 532, 994, 1265
AcoI YGGCCR 1 cut(s) 1503
AcyI GRCGYC 2 cut(s) 1454, 1742
AfaI GTAC 7 cut(s) 129, 167, 203, 1074, 1201, 1243, 1315
AfiI CCNNNNNNNGG 9 cut(s) 76, 324, 481, 825, 1402, 1506, 1573, 1682, 1846
AflIII ACRYGT 2 cut(s) 198, 1113
AgsI TTSAA 6 cut(s) 154, 235, 1171, 1206, 1248, 1327
AjnI CCWGG 3 cut(s) 317, 865, 1505
AloI GAACNNNNNNTCC 2 cut(s) 75, 107
Alw26I GTCTC 2 cut(s) 1629, 1745
AlwI GGATC 5 cut(s) 434, 519, 532, 994, 1265
AlwNI CAGNNNCTG 2 cut(s) 66, 1091
Ama87I CYCGRG 2 cut(s) 434, 1681
AoxI GGCC 5 cut(s) 295, 709, 959, 1503, 1554
ApeKI GCWGC 8 cut(s) 335, 799, 1085, 1088, 1307, 1363, 1472, 1686
Asp718I GGTACC 1 cut(s) 127
AspS9I GGNCC 7 cut(s) 295, 405, 710, 1414, 1528, 1564, 1678
AsuC2I CCSGG 8 cut(s) 54, 132, 289, 563, 1558, 1682, 1683, 1804
AsuHPI GGTGA 4 cut(s) 146, 182, 1456, 1623
AsuII TTCGAA 1 cut(s) 441
AvaI CYCGRG 2 cut(s) 434, 1681
AvaII GGWCC 5 cut(s) 405, 1414, 1528, 1564, 1678
AxyI CCTNAGG 1 cut(s) 509
BaeGI GKGCMC 1 cut(s) 1043
BamHI GGATCC 1 cut(s) 524
BanI GGYRCC 3 cut(s) 127, 314, 967
BanII GRGCYC 2 cut(s) 770, 1378
BbsI GAAGAC 2 cut(s) 144, 1600
BbvI GCAGC 8 cut(s) 322, 786, 1097, 1100, 1294, 1350, 1459, 1673
BccI CCATC 5 cut(s) 11, 417, 608, 721, 1475
BciT130I CCWGG 3 cut(s) 319, 867, 1507
BciVI GTATCC 1 cut(s) 1335
BclI TGATCA 5 cut(s) 448, 904, 1210, 1252, 1642
BcnI CCSGG 8 cut(s) 54, 132, 289, 563, 1558, 1682, 1683, 1804
BcoDI GTCTC 2 cut(s) 1629, 1745
BfaI CTAG 3 cut(s) 896, 950, 1010
BfmI CTRYAG 3 cut(s) 58, 1275, 1308
BfuAI ACCTGC 2 cut(s) 1301, 1763
BfuI GTATCC 1 cut(s) 1335
BglII AGATCT 1 cut(s) 241
BmcAI AGTACT 2 cut(s) 1201, 1243
Bme18I GGWCC 5 cut(s) 405, 1414, 1528, 1564, 1678
BmeT110I CYCGRG 2 cut(s) 434, 1681
BmgT120I GGNCC 7 cut(s) 295, 405, 710, 1414, 1528, 1564, 1678
BmiI GGNNCC 7 cut(s) 129, 316, 406, 526, 969, 1431, 1680
BmsI GCATC 6 cut(s) 49, 513, 694, 805, 1062, 1138
BpiI GAAGAC 2 cut(s) 144, 1600
Bpu10I CCTNAGC 1 cut(s) 764
Bpu14I TTCGAA 1 cut(s) 441
BpuEI CTTGAG 1 cut(s) 247
BpuMI CCSGG 8 cut(s) 54, 132, 289, 563, 1558, 1682, 1683, 1804
BsaAI YACGTR 1 cut(s) 1370
BsaBI GATNNNNATC 2 cut(s) 1257, 1384
BsaHI GRCGYC 2 cut(s) 1454, 1742
BsaI GGTCTC 1 cut(s) 1745
BsaJI CCNNGG 6 cut(s) 72, 108, 182, 1337, 1500, 1681
BsaWI WCCGGW 6 cut(s) 578, 689, 1411, 1426, 1675, 1692
BsaXI ACNNNNNCTCC 6 cut(s) 75, 105, 111, 141, 573, 603
Bsc4I CCNNNNNNNGG 9 cut(s) 76, 324, 481, 825, 1402, 1506, 1573, 1682, 1846
Bse118I RCCGGY 2 cut(s) 1402, 1432
Bse1I ACTGG 3 cut(s) 615, 1590, 1829
Bse21I CCTNAGG 1 cut(s) 509
Bse3DI GCAATG 3 cut(s) 950, 1055, 1699
Bse8I GATNNNNATC 2 cut(s) 1257, 1384
BseBI CCWGG 3 cut(s) 319, 867, 1507
BseDI CCNNGG 6 cut(s) 72, 108, 182, 1337, 1500, 1681
BseGI GGATG 4 cut(s) 22, 504, 619, 1129
BseJI GATNNNNATC 2 cut(s) 1257, 1384
BseLI CCNNNNNNNGG 9 cut(s) 76, 324, 481, 825, 1402, 1506, 1573, 1682, 1846
BseMI GCAATG 3 cut(s) 950, 1055, 1699
BseMII CTCAG 3 cut(s) 755, 1091, 1530
BseNI ACTGG 3 cut(s) 615, 1590, 1829
BseRI GAGGAG 2 cut(s) 92, 1373
BseSI GKGCMC 1 cut(s) 1043
BseXI GCAGC 8 cut(s) 322, 786, 1097, 1100, 1294, 1350, 1459, 1673
Bsh1236I CGCG 2 cut(s) 702, 1502
Bsh1285I CGRYCG 2 cut(s) 562, 1445
BshFI GGCC 5 cut(s) 297, 711, 961, 1505, 1556
BshNI GGYRCC 3 cut(s) 127, 314, 967
BsiEI CGRYCG 2 cut(s) 562, 1445
BsiHKCI CYCGRG 2 cut(s) 434, 1681
BslFI GGGAC 6 cut(s) 90, 200, 209, 344, 575, 1664
BslI CCNNNNNNNGG 9 cut(s) 76, 324, 481, 825, 1402, 1506, 1573, 1682, 1846
BsmAI GTCTC 2 cut(s) 1629, 1745
BsmFI GGGAC 6 cut(s) 90, 200, 209, 344, 575, 1664
BsmI GAATGC 1 cut(s) 286
BsnI GGCC 5 cut(s) 297, 711, 961, 1505, 1556
Bso31I GGTCTC 1 cut(s) 1745
BsoBI CYCGRG 2 cut(s) 434, 1681
Bsp119I TTCGAA 1 cut(s) 441
Bsp1286I GDGCHC 3 cut(s) 770, 1043, 1378
Bsp1407I TGTACA 1 cut(s) 201
BspACI CCGC 7 cut(s) 94, 312, 700, 1436, 1500, 1502, 1587
BspANI GGCC 5 cut(s) 297, 711, 961, 1505, 1556
BspCNI CTCAG 3 cut(s) 756, 1092, 1531
BspFNI CGCG 2 cut(s) 702, 1502
BspHI TCATGA 1 cut(s) 907
BspLI GGNNCC 7 cut(s) 129, 316, 406, 526, 969, 1431, 1680
BspMAI CTGCAG 1 cut(s) 1312
BspMI ACCTGC 2 cut(s) 1301, 1763
BspPI GGATC 5 cut(s) 434, 519, 532, 994, 1265
BspQI GCTCTTC 1 cut(s) 1119
BspT104I TTCGAA 1 cut(s) 441
BspT107I GGYRCC 3 cut(s) 127, 314, 967
BspTNI GGTCTC 1 cut(s) 1745
BsrDI GCAATG 3 cut(s) 950, 1055, 1699
BsrFI RCCGGY 2 cut(s) 1402, 1432
BsrGI TGTACA 1 cut(s) 201
BsrI ACTGG 3 cut(s) 615, 1590, 1829
BssAI RCCGGY 2 cut(s) 1402, 1432
BssECI CCNNGG 6 cut(s) 72, 108, 182, 1337, 1500, 1681
BssNAI GTATAC 1 cut(s) 349
BssNI GRCGYC 2 cut(s) 1454, 1742
BssT1I CCWWGG 4 cut(s) 72, 108, 182, 1337
Bst1107I GTATAC 1 cut(s) 349
Bst2UI CCWGG 3 cut(s) 319, 867, 1507
Bst4CI ACNGT 7 cut(s) 170, 277, 749, 862, 1038, 1061, 1528
Bst6I CTCTTC 2 cut(s) 117, 1119
BstACI GRCGYC 2 cut(s) 1454, 1742
BstAUI TGTACA 1 cut(s) 201
BstBAI YACGTR 1 cut(s) 1370
BstBI TTCGAA 1 cut(s) 441
BstC8I GCNNGC 6 cut(s) 467, 573, 681, 709, 1189, 1760
BstDEI CTNAG 5 cut(s) 509, 764, 1100, 1389, 1539
BstDSI CCRYGG 1 cut(s) 1500
BstENI CCTNNNNNAGG 1 cut(s) 1571
BstF5I GGATG 4 cut(s) 22, 504, 619, 1129
BstFNI CGCG 2 cut(s) 702, 1502
BstMAI GTCTC 2 cut(s) 1629, 1745
BstMCI CGRYCG 2 cut(s) 562, 1445
BstMWI GCNNNNNNNGC 3 cut(s) 708, 967, 1764
BstNI CCWGG 3 cut(s) 319, 867, 1507
BstNSI RCATGY 5 cut(s) 202, 469, 683, 1009, 1117
BstSFI CTRYAG 3 cut(s) 58, 1275, 1308
BstSLI GKGCMC 1 cut(s) 1043
BstUI CGCG 2 cut(s) 702, 1502
BstV1I GCAGC 8 cut(s) 322, 786, 1097, 1100, 1294, 1350, 1459, 1673
BstV2I GAAGAC 2 cut(s) 144, 1600
BstX2I RGATCY 2 cut(s) 241, 524
BstXI CCANNNNNNTGG 1 cut(s) 17
BstYI RGATCY 2 cut(s) 241, 524
BstZ17I GTATAC 1 cut(s) 349
Bsu36I CCTNAGG 1 cut(s) 509
BsuI GTATCC 1 cut(s) 1335
BsuRI GGCC 5 cut(s) 297, 711, 961, 1505, 1556
BtgI CCRYGG 1 cut(s) 1500
BtgZI GCGATG 2 cut(s) 717, 1453
BtsCI GGATG 4 cut(s) 22, 504, 619, 1129
BtsI GCAGTG 1 cut(s) 830
BtsIMutI CAGTG 6 cut(s) 608, 830, 858, 1043, 1536, 1726
BveI ACCTGC 2 cut(s) 1301, 1763
Cac8I GCNNGC 6 cut(s) 467, 573, 681, 709, 1189, 1760
CaiI CAGNNNCTG 2 cut(s) 66, 1091
CciI TCATGA 1 cut(s) 907
Cfr10I RCCGGY 2 cut(s) 1402, 1432
Cfr13I GGNCC 7 cut(s) 295, 405, 710, 1414, 1528, 1564, 1678
Cfr42I CCGCGG 1 cut(s) 1503
Cfr9I CCCGGG 1 cut(s) 1681
CpoI CGGWCCG 1 cut(s) 1414
CseI GACGC 2 cut(s) 341, 1464
Csp6I GTAC 7 cut(s) 128, 166, 202, 1073, 1200, 1242, 1314
CspI CGGWCCG 1 cut(s) 1414
CviQI GTAC 7 cut(s) 128, 166, 202, 1073, 1200, 1242, 1314
DdeI CTNAG 5 cut(s) 509, 764, 1100, 1389, 1539
EaeI YGGCCR 1 cut(s) 1503
Eam1104I CTCTTC 2 cut(s) 117, 1119
EarI CTCTTC 2 cut(s) 117, 1119
Eco130I CCWWGG 4 cut(s) 72, 108, 182, 1337
Eco24I GRGCYC 2 cut(s) 770, 1378
Eco31I GGTCTC 1 cut(s) 1745
Eco32I GATATC 1 cut(s) 7
Eco47I GGWCC 5 cut(s) 405, 1414, 1528, 1564, 1678
Eco81I CCTNAGG 1 cut(s) 509
Eco88I CYCGRG 2 cut(s) 434, 1681
EcoNI CCTNNNNNAGG 1 cut(s) 1571
EcoRII CCWGG 3 cut(s) 317, 865, 1505
EcoRV GATATC 1 cut(s) 7
EcoT14I CCWWGG 4 cut(s) 72, 108, 182, 1337
EcoT22I ATGCAT 3 cut(s) 506, 681, 1055
EcoT38I GRGCYC 2 cut(s) 770, 1378
ErhI CCWWGG 4 cut(s) 72, 108, 182, 1337
FalI AAGNNNNNCTT 6 cut(s) 209, 241, 373, 405, 657, 689
FaqI GGGAC 6 cut(s) 90, 200, 209, 344, 575, 1664
FauNDI CATATG 2 cut(s) 191, 808
FbaI TGATCA 5 cut(s) 448, 904, 1210, 1252, 1642
FblI GTMKAC 1 cut(s) 348
FokI GGATG 4 cut(s) 29, 491, 626, 1116
FriOI GRGCYC 2 cut(s) 770, 1378
FspBI CTAG 3 cut(s) 896, 950, 1010
HaeIII GGCC 5 cut(s) 297, 711, 961, 1505, 1556
HgaI GACGC 2 cut(s) 341, 1464
Hin1I GRCGYC 2 cut(s) 1454, 1742
HindIII AAGCTT 1 cut(s) 569
HinfI GANTC 9 cut(s) 641, 1419, 1577, 1596, 1696, 1711, 1772, 1777, 1843
HphI GGTGA 4 cut(s) 146, 182, 1456, 1623
Hpy166II GTNNAC 4 cut(s) 173, 349, 784, 851
Hpy188III TCNNGA 2 cut(s) 785, 908
Hpy8I GTNNAC 4 cut(s) 173, 349, 784, 851
Hpy99I CGWCG 6 cut(s) 1456, 1459, 1480, 1490, 1639, 1747
HpyAV CCTTC 4 cut(s) 286, 1292, 1567, 1720
HpyCH4III ACNGT 7 cut(s) 170, 277, 749, 862, 1038, 1061, 1528
HpyCH4IV ACGT 6 cut(s) 345, 1071, 1369, 1454, 1734, 1742
HpyF10VI GCNNNNNNNGC 3 cut(s) 708, 967, 1764
HpyF3I CTNAG 5 cut(s) 509, 764, 1100, 1389, 1539
HpySE526I ACGT 6 cut(s) 345, 1071, 1369, 1454, 1734, 1742
Hsp92I GRCGYC 2 cut(s) 1454, 1742
KpnI GGTACC 1 cut(s) 131
Ksp22I TGATCA 5 cut(s) 448, 904, 1210, 1252, 1642
KspI CCGCGG 1 cut(s) 1503
LguI GCTCTTC 1 cut(s) 1119
LmnI GCTCC 3 cut(s) 1360, 1788, 1796
Lsp1109I GCAGC 8 cut(s) 322, 786, 1097, 1100, 1294, 1350, 1459, 1673
LweI GCATC 6 cut(s) 49, 513, 694, 805, 1062, 1138
MaeI CTAG 3 cut(s) 896, 950, 1010
MaeII ACGT 6 cut(s) 345, 1071, 1369, 1454, 1734, 1742
MaeIII GTNAC 3 cut(s) 371, 1061, 1534
MflI RGATCY 2 cut(s) 241, 524
MhlI GDGCHC 3 cut(s) 770, 1043, 1378
MluCI AATT 7 cut(s) 26, 160, 648, 684, 838, 931, 1021
MlyI GAGTC 3 cut(s) 1705, 1720, 1766
MmeI TCCRAC 1 cut(s) 1542
Mph1103I ATGCAT 3 cut(s) 506, 681, 1055
MseI TTAA 1 cut(s) 651
MslI CAYNNNNRTG 1 cut(s) 15
MspA1I CMGCKG 3 cut(s) 983, 1091, 1502
Mva1269I GAATGC 1 cut(s) 286
MvaI CCWGG 3 cut(s) 319, 867, 1507
MvnI CGCG 2 cut(s) 702, 1502
MwoI GCNNNNNNNGC 3 cut(s) 708, 967, 1764
NciI CCSGG 8 cut(s) 54, 132, 289, 563, 1558, 1682, 1683, 1804
NdeI CATATG 2 cut(s) 191, 808
NlaIV GGNNCC 7 cut(s) 129, 316, 406, 526, 969, 1431, 1680
NmuCI GTSAC 2 cut(s) 1061, 1534
NsiI ATGCAT 3 cut(s) 506, 681, 1055
NspI RCATGY 5 cut(s) 202, 469, 683, 1009, 1117
NspV TTCGAA 1 cut(s) 441
PaeI GCATGC 2 cut(s) 469, 683
PaeR7I CTCGAG 1 cut(s) 434
PagI TCATGA 1 cut(s) 907
PciI ACATGT 2 cut(s) 198, 1113
PciSI GCTCTTC 1 cut(s) 1119
PcsI WCGNNNNNNNCGW 2 cut(s) 1375, 1451
PctI GAATGC 1 cut(s) 286
PfeI GAWTC 6 cut(s) 641, 1419, 1577, 1596, 1777, 1843
PflFI GACNNNGTC 1 cut(s) 1744
PfoI TCCNGGA 2 cut(s) 287, 1802
PleI GAGTC 3 cut(s) 1704, 1719, 1766
PpsI GAGTC 3 cut(s) 1704, 1719, 1766
Ppu21I YACGTR 1 cut(s) 1370
PscI ACATGT 2 cut(s) 198, 1113
Psp1406I AACGTT 1 cut(s) 1734
Psp6I CCWGG 3 cut(s) 317, 865, 1505
PspGI CCWGG 3 cut(s) 317, 865, 1505
PspN4I GGNNCC 7 cut(s) 129, 316, 406, 526, 969, 1431, 1680
PspPI GGNCC 7 cut(s) 295, 405, 710, 1414, 1528, 1564, 1678
PspXI VCTCGAGB 1 cut(s) 434
PstI CTGCAG 1 cut(s) 1312
PstNI CAGNNNCTG 2 cut(s) 66, 1091
PsuI RGATCY 2 cut(s) 241, 524
PsyI GACNNNGTC 1 cut(s) 1744
PvuII CAGCTG 2 cut(s) 983, 1091
RsaI GTAC 7 cut(s) 129, 167, 203, 1074, 1201, 1243, 1315
RsaNI GTAC 7 cut(s) 128, 166, 202, 1073, 1200, 1242, 1314
RseI CAYNNNNRTG 1 cut(s) 15
Rsr2I CGGWCCG 1 cut(s) 1414
RsrII CGGWCCG 1 cut(s) 1414
SacII CCGCGG 1 cut(s) 1503
SapI GCTCTTC 1 cut(s) 1119
SaqAI TTAA 1 cut(s) 651
Sau96I GGNCC 7 cut(s) 295, 405, 710, 1414, 1528, 1564, 1678
ScaI AGTACT 2 cut(s) 1201, 1243
SchI GAGTC 3 cut(s) 1705, 1720, 1766
SduI GDGCHC 3 cut(s) 770, 1043, 1378
SfaNI GCATC 6 cut(s) 49, 513, 694, 805, 1062, 1138
SfcI CTRYAG 3 cut(s) 58, 1275, 1308
Sfr274I CTCGAG 1 cut(s) 434
Sfr303I CCGCGG 1 cut(s) 1503
SfuI TTCGAA 1 cut(s) 441
SgrBI CCGCGG 1 cut(s) 1503
SinI GGWCC 5 cut(s) 405, 1414, 1528, 1564, 1678
SlaI CTCGAG 1 cut(s) 434
SmaI CCCGGG 1 cut(s) 1683
SmiMI CAYNNNNRTG 1 cut(s) 15
SmlI CTYRAG 2 cut(s) 226, 434
SmoI CTYRAG 2 cut(s) 226, 434
SphI GCATGC 2 cut(s) 469, 683
Sse9I AATT 7 cut(s) 26, 160, 648, 684, 838, 931, 1021
SsiI CCGC 7 cut(s) 94, 312, 700, 1436, 1500, 1502, 1587
SspMI CTAG 3 cut(s) 896, 950, 1010
StyI CCWWGG 4 cut(s) 72, 108, 182, 1337
TaaI ACNGT 7 cut(s) 170, 277, 749, 862, 1038, 1061, 1528
TaiI ACGT 6 cut(s) 348, 1074, 1372, 1457, 1737, 1745
TaqII GACCGA 2 cut(s) 1431, 1431
TasI AATT 7 cut(s) 26, 160, 648, 684, 838, 931, 1021
TatI WGTACW 3 cut(s) 201, 1199, 1241
TauI GCSGC 2 cut(s) 315, 1505
TfiI GAWTC 6 cut(s) 641, 1419, 1577, 1596, 1777, 1843
Tru1I TTAA 1 cut(s) 651
Tru9I TTAA 1 cut(s) 651
TscAI CASTG 6 cut(s) 615, 830, 865, 1043, 1543, 1726
TseFI GTSAC 2 cut(s) 1061, 1534
TseI GCWGC 8 cut(s) 335, 799, 1085, 1088, 1307, 1363, 1472, 1686
Tsp45I GTSAC 2 cut(s) 1061, 1534
TspDTI ATGAA 5 cut(s) 39, 644, 924, 1311, 1586
TspGWI ACGGA 1 cut(s) 1665
TspMI CCCGGG 1 cut(s) 1681
TspRI CASTG 6 cut(s) 615, 830, 865, 1043, 1543, 1726
Tth111I GACNNNGTC 1 cut(s) 1744
VpaK11BI GGWCC 5 cut(s) 405, 1414, 1528, 1564, 1678
XagI CCTNNNNNAGG 1 cut(s) 1571
XceI RCATGY 5 cut(s) 202, 469, 683, 1009, 1117
XhoI CTCGAG 1 cut(s) 434
XmaI CCCGGG 1 cut(s) 1681
XmiI GTMKAC 1 cut(s) 348
XspI CTAG 3 cut(s) 896, 950, 1010
ZraI GACGTC 2 cut(s) 1455, 1743
ZrmI AGTACT 2 cut(s) 1201, 1243
Zsp2I ATGCAT 3 cut(s) 506, 681, 1055
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.