Rorug07G0297400
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000076
Physical Location & Seq
Reverse (-)
29347319 .. 29348103
785 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0297400.1

Sequence Viewer

Length: 618 bp
ATGGAGCTACAAACCCAGCAACAAATCGAGGATGGAGGAAACAACCAAGCAGCCGGGAGTAGTGCCAACACAGATTTCTGGCGAAGCCGTGCCAGGTGGGTTCCTACTCCAGATCAAATAAGGATCCTCAAGGATCTTTACTACGACAAGGGAGTTAAGCGCCCAACTACAGAGCATATTCACGAGATCTGTCTCCAGCTGAACCAGTATGGACATGTTGAGGGCAAGAACATTTATTTTTGGTTCCAGAATGTCAGGGCTCGAGAGAAGCAGATGAAGAGGTGCAATCAGGCTGCTCAAGTGCCCATGGGAACTAGTTCTCCTGGTACTGCTGGTGGATCCATTGACATCAATTTTGGGTCCACTAGTTCTACTGATGATGGTAGATCCATTAATCTCAACTTTGGTTCCACCGATTCTACTGGAGGACAAACATCCCTGCAACAACGAGGAGGAGATCACCAGGAGATTGAAACCCTTCCGTTGTTCCCCATGCATGGTGAGGACATCTTGGGCATCATGAAGACTACTTCCGAGGGAGGTAGCGGTTATGGCGGTGGCTCTCACATTTCCCTTGAGCTCAGCCTCAACTCCTACAGAGATGCAGACATGGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

205

Amino Acids

22.52

Weight (kDa)

5.47

Isoelectric Point (pI)

56.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Homeodomain PF00046 30 - 91 8.4e-10 Homeodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 546, 555
AclWI GGATC 6 cut(s) 118, 131, 141, 333, 346, 381
AfaI GTAC 1 cut(s) 328
AfiI CCNNNNNNNGG 1 cut(s) 497
AflIII ACRYGT 1 cut(s) 214
AgsI TTSAA 1 cut(s) 473
AhlI ACTAGT 2 cut(s) 314, 365
AjnI CCWGG 3 cut(s) 92, 322, 462
AjuI GAANNNNNNNTTGG 2 cut(s) 59, 91
AloI GAACNNNNNNTCC 2 cut(s) 304, 336
AluBI AGCT 3 cut(s) 7, 199, 580
AluI AGCT 3 cut(s) 7, 199, 580
Alw21I GWGCWC 1 cut(s) 582
Alw26I GTCTC 1 cut(s) 197
AlwI GGATC 6 cut(s) 118, 131, 141, 333, 346, 381
Ama87I CYCGRG 1 cut(s) 261
ApeKI GCWGC 2 cut(s) 50, 293
ArsI GACNNNNNNTTYG 2 cut(s) 338, 370
AseI ATTAAT 1 cut(s) 393
Asp700I GAANNNNTTC 2 cut(s) 316, 477
AspLEI GCGC 1 cut(s) 162
AspS9I GGNCC 1 cut(s) 360
AsuC2I CCSGG 1 cut(s) 55
AsuHPI GGTGA 2 cut(s) 452, 512
AvaI CYCGRG 1 cut(s) 261
AvaII GGWCC 1 cut(s) 360
BaeGI GKGCMC 1 cut(s) 306
BamHI GGATCC 2 cut(s) 123, 338
BanII GRGCYC 2 cut(s) 262, 582
BauI CACGAG 1 cut(s) 182
BbsI GAAGAC 1 cut(s) 530
Bbv12I GWGCWC 1 cut(s) 582
BbvI GCAGC 2 cut(s) 62, 280
BccI CCATC 2 cut(s) 26, 374
BceAI ACGGC 1 cut(s) 72
BciT130I CCWGG 3 cut(s) 94, 324, 464
BcnI CCSGG 1 cut(s) 55
BcoDI GTCTC 1 cut(s) 197
BcuI ACTAGT 2 cut(s) 314, 365
BfaI CTAG 2 cut(s) 315, 366
BfmI CTRYAG 2 cut(s) 168, 595
BfoI RGCGCY 1 cut(s) 163
BglII AGATCT 1 cut(s) 186
BisI GCNGC 2 cut(s) 51, 294
BlpI GCTNAGC 1 cut(s) 581
BlsI GCNGC 2 cut(s) 52, 295
Bme1390I CCNGG 4 cut(s) 55, 94, 324, 464
Bme18I GGWCC 1 cut(s) 360
BmeT110I CYCGRG 1 cut(s) 261
BmgT120I GGNCC 1 cut(s) 360
BmiI GGNNCC 6 cut(s) 102, 125, 245, 340, 361, 409
BmrFI CCNGG 4 cut(s) 55, 94, 324, 464
BmsI GCATC 2 cut(s) 525, 592
BpiI GAAGAC 1 cut(s) 530
BpmI CTGGAG 3 cut(s) 93, 179, 444
Bpu1102I GCTNAGC 1 cut(s) 581
BpuEI CTTGAG 3 cut(s) 113, 282, 596
BpuMI CCSGG 1 cut(s) 55
BsaJI CCNNGG 2 cut(s) 306, 534
BsaXI ACNNNNNCTCC 2 cut(s) 304, 334
Bsc4I CCNNNNNNNGG 1 cut(s) 497
Bse1I ACTGG 2 cut(s) 205, 427
BseBI CCWGG 3 cut(s) 94, 324, 464
BseDI CCNNGG 2 cut(s) 306, 534
BseGI GGATG 2 cut(s) 37, 434
BseLI CCNNNNNNNGG 1 cut(s) 497
BseMII CTCAG 1 cut(s) 595
BseNI ACTGG 2 cut(s) 205, 427
BseRI GAGGAG 2 cut(s) 465, 468
BseSI GKGCMC 1 cut(s) 306
BseXI GCAGC 2 cut(s) 62, 280
BseYI CCCAGC 1 cut(s) 15
BsiHKAI GWGCWC 1 cut(s) 582
BsiHKCI CYCGRG 1 cut(s) 261
BsiSI CCGG 1 cut(s) 54
BslI CCNNNNNNNGG 1 cut(s) 497
BsmAI GTCTC 1 cut(s) 197
BsoBI CYCGRG 1 cut(s) 261
Bsp1286I GDGCHC 3 cut(s) 262, 306, 582
Bsp143I GATC 7 cut(s) 112, 123, 133, 186, 338, 386, 457
Bsp1720I GCTNAGC 1 cut(s) 581
Bsp19I CCATGG 1 cut(s) 306
BspACI CCGC 2 cut(s) 546, 555
BspCNI CTCAG 1 cut(s) 594
BspHI TCATGA 1 cut(s) 519
BspLI GGNNCC 6 cut(s) 102, 125, 245, 340, 361, 409
BspPI GGATC 6 cut(s) 118, 131, 141, 333, 346, 381
BsrI ACTGG 2 cut(s) 205, 427
BssECI CCNNGG 2 cut(s) 306, 534
BssMI GATC 7 cut(s) 112, 123, 133, 186, 338, 386, 457
BssSI CACGAG 1 cut(s) 182
BssT1I CCWWGG 1 cut(s) 306
Bst2BI CACGAG 1 cut(s) 182
Bst2UI CCWGG 3 cut(s) 94, 324, 464
Bst6I CTCTTC 1 cut(s) 272
BstDEI CTNAG 2 cut(s) 581, 615
BstDSI CCRYGG 1 cut(s) 306
BstF5I GGATG 2 cut(s) 37, 434
BstH2I RGCGCY 1 cut(s) 163
BstHHI GCGC 1 cut(s) 162
BstKTI GATC 7 cut(s) 115, 126, 136, 189, 341, 389, 460
BstMAI GTCTC 1 cut(s) 197
BstMBI GATC 7 cut(s) 112, 123, 133, 186, 338, 386, 457
BstMWI GCNNNNNNNGC 2 cut(s) 552, 611
BstNI CCWGG 3 cut(s) 94, 324, 464
BstNSI RCATGY 1 cut(s) 218
BstSCI CCNGG 4 cut(s) 53, 92, 322, 462
BstSFI CTRYAG 2 cut(s) 168, 595
BstSLI GKGCMC 1 cut(s) 306
BstV1I GCAGC 2 cut(s) 62, 280
BstV2I GAAGAC 1 cut(s) 530
BstX2I RGATCY 5 cut(s) 123, 133, 186, 338, 386
BstYI RGATCY 5 cut(s) 123, 133, 186, 338, 386
BtgI CCRYGG 1 cut(s) 306
BtsCI GGATG 2 cut(s) 37, 434
CciI TCATGA 1 cut(s) 519
CfoI GCGC 1 cut(s) 162
Cfr13I GGNCC 1 cut(s) 360
Csp6I GTAC 1 cut(s) 327
CviAII CATG 6 cut(s) 215, 307, 493, 497, 520, 610
CviQI GTAC 1 cut(s) 327
DdeI CTNAG 2 cut(s) 581, 615
DpnI GATC 7 cut(s) 114, 125, 135, 188, 340, 388, 459
DpnII GATC 7 cut(s) 112, 123, 133, 186, 338, 386, 457
Eam1104I CTCTTC 1 cut(s) 272
EarI CTCTTC 1 cut(s) 272
Ecl136II GAGCTC 1 cut(s) 580
Eco130I CCWWGG 1 cut(s) 306
Eco24I GRGCYC 2 cut(s) 262, 582
Eco47I GGWCC 1 cut(s) 360
Eco53kI GAGCTC 1 cut(s) 580
Eco88I CYCGRG 1 cut(s) 261
EcoICRI GAGCTC 1 cut(s) 580
EcoRII CCWGG 3 cut(s) 92, 322, 462
EcoT14I CCWWGG 1 cut(s) 306
EcoT22I ATGCAT 1 cut(s) 498
EcoT38I GRGCYC 2 cut(s) 262, 582
ErhI CCWWGG 1 cut(s) 306
FaeI CATG 6 cut(s) 218, 310, 496, 500, 523, 613
FaiI YATR 9 cut(s) 177, 210, 216, 308, 494, 498, 521, 552, 611
FatI CATG 6 cut(s) 214, 306, 492, 496, 519, 609
Fnu4HI GCNGC 2 cut(s) 51, 294
FokI GGATG 2 cut(s) 44, 421
FriOI GRGCYC 2 cut(s) 262, 582
Fsp4HI GCNGC 2 cut(s) 51, 294
FspBI CTAG 2 cut(s) 315, 366
GlaI GCGC 1 cut(s) 161
GluI GCNGC 2 cut(s) 51, 294
GsaI CCCAGC 1 cut(s) 19
GsuI CTGGAG 3 cut(s) 93, 179, 444
HaeII RGCGCY 1 cut(s) 163
HapII CCGG 1 cut(s) 54
HhaI GCGC 1 cut(s) 162
Hin1II CATG 6 cut(s) 218, 310, 496, 500, 523, 613
Hin6I GCGC 1 cut(s) 160
HinP1I GCGC 1 cut(s) 160
HinfI GANTC 1 cut(s) 416
HpaII CCGG 1 cut(s) 54
HphI GGTGA 2 cut(s) 452, 512
Hpy166II GTNNAC 1 cut(s) 363
Hpy188I TCNGA 1 cut(s) 535
Hpy188III TCNNGA 5 cut(s) 110, 182, 247, 263, 520
Hpy8I GTNNAC 1 cut(s) 363
HpyAV CCTTC 1 cut(s) 488
HpyCH4V TGCA 4 cut(s) 285, 442, 496, 605
HpyF10VI GCNNNNNNNGC 2 cut(s) 552, 611
HpyF3I CTNAG 2 cut(s) 581, 615
Hsp92II CATG 6 cut(s) 218, 310, 496, 500, 523, 613
HspAI GCGC 1 cut(s) 160
Kzo9I GATC 7 cut(s) 112, 123, 133, 186, 338, 386, 457
LmnI GCTCC 1 cut(s) 4
Lsp1109I GCAGC 2 cut(s) 62, 280
LweI GCATC 2 cut(s) 525, 592
MaeI CTAG 2 cut(s) 315, 366
MalI GATC 7 cut(s) 114, 125, 135, 188, 340, 388, 459
MboI GATC 7 cut(s) 112, 123, 133, 186, 338, 386, 457
MboII GAAGA 2 cut(s) 289, 535
MflI RGATCY 5 cut(s) 123, 133, 186, 338, 386
MhlI GDGCHC 3 cut(s) 262, 306, 582
MluCI AATT 1 cut(s) 352
Mph1103I ATGCAT 1 cut(s) 498
MroXI GAANNNNTTC 2 cut(s) 316, 477
MseI TTAA 2 cut(s) 156, 393
MspA1I CMGCKG 1 cut(s) 199
MspI CCGG 1 cut(s) 54
MspR9I CCNGG 4 cut(s) 55, 94, 324, 464
MvaI CCWGG 3 cut(s) 94, 324, 464
MwoI GCNNNNNNNGC 2 cut(s) 552, 611
NciI CCSGG 1 cut(s) 55
NcoI CCATGG 1 cut(s) 306
NdeII GATC 7 cut(s) 112, 123, 133, 186, 338, 386, 457
NlaIII CATG 6 cut(s) 218, 310, 496, 500, 523, 613
NlaIV GGNNCC 6 cut(s) 102, 125, 245, 340, 361, 409
NsiI ATGCAT 1 cut(s) 498
NspI RCATGY 1 cut(s) 218
PaeR7I CTCGAG 1 cut(s) 261
PagI TCATGA 1 cut(s) 519
PciI ACATGT 1 cut(s) 214
PdmI GAANNNNTTC 2 cut(s) 316, 477
PfeI GAWTC 1 cut(s) 416
PkrI GCNGC 2 cut(s) 52, 295
PscI ACATGT 1 cut(s) 214
PshBI ATTAAT 1 cut(s) 393
Psp124BI GAGCTC 1 cut(s) 582
Psp6I CCWGG 3 cut(s) 92, 322, 462
PspFI CCCAGC 1 cut(s) 15
PspGI CCWGG 3 cut(s) 92, 322, 462
PspN4I GGNNCC 6 cut(s) 102, 125, 245, 340, 361, 409
PspPI GGNCC 1 cut(s) 360
PsuI RGATCY 5 cut(s) 123, 133, 186, 338, 386
PvuII CAGCTG 1 cut(s) 199
RsaI GTAC 1 cut(s) 328
RsaNI GTAC 1 cut(s) 327
SacI GAGCTC 1 cut(s) 582
SaqAI TTAA 2 cut(s) 156, 393
SatI GCNGC 2 cut(s) 51, 294
Sau3AI GATC 7 cut(s) 112, 123, 133, 186, 338, 386, 457
Sau96I GGNCC 1 cut(s) 360
ScrFI CCNGG 4 cut(s) 55, 94, 324, 464
SduI GDGCHC 3 cut(s) 262, 306, 582
SetI ASST 6 cut(s) 9, 98, 201, 284, 544, 582
SfaNI GCATC 2 cut(s) 525, 592
SfcI CTRYAG 2 cut(s) 168, 595
Sfr274I CTCGAG 1 cut(s) 261
SinI GGWCC 1 cut(s) 360
SlaI CTCGAG 1 cut(s) 261
SmlI CTYRAG 4 cut(s) 128, 261, 297, 575
SmoI CTYRAG 4 cut(s) 128, 261, 297, 575
SpeI ACTAGT 2 cut(s) 314, 365
Sse9I AATT 1 cut(s) 352
SsiI CCGC 2 cut(s) 546, 555
SspMI CTAG 2 cut(s) 315, 366
SstI GAGCTC 1 cut(s) 582
StyD4I CCNGG 4 cut(s) 53, 92, 322, 462
StyI CCWWGG 1 cut(s) 306
TaqI TCGA 2 cut(s) 27, 262
TasI AATT 1 cut(s) 352
TfiI GAWTC 1 cut(s) 416
Tru1I TTAA 2 cut(s) 156, 393
Tru9I TTAA 2 cut(s) 156, 393
TseI GCWGC 2 cut(s) 50, 293
TspDTI ATGAA 2 cut(s) 290, 536
TspGWI ACGGA 1 cut(s) 471
VpaK11BI GGWCC 1 cut(s) 360
VspI ATTAAT 1 cut(s) 393
XceI RCATGY 1 cut(s) 218
XhoI CTCGAG 1 cut(s) 261
XmnI GAANNNNTTC 2 cut(s) 316, 477
XspI CTAG 2 cut(s) 315, 366
Zsp2I ATGCAT 1 cut(s) 498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.