Rmu_sc0032116.1_g000002
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0032116.1
OG0000076
Physical Location & Seq
Reverse (-)
2865 .. 4193
1329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0032116.1_g000002.1.cds

Sequence Viewer

Length: 1329 bp
atgcagcaagagtttgcaatggaggagagcagaggaaatcaactcccaggcgagaggttctgccccatggaggacgaactagtcctcttctacctcaagcccatgttgagcggacagaaggtgcctggcagaaacctcgtggtatttgactgtgacctctacggtcaccaagaaccttgggagatatgggacgcctacaagaccagaagaccaaacgacttaaggctcaacaaggacatctacttcttaacccaacacaagaagatgagttccacagacaagcgcgtacgccgtgccgttggaaatggcacctggaagggcgatgactccggcaagccagtaaaatctttggagactggttgtgtggttggcttgaagaaaagatttacttacaagaacgaagcatcggtgcacaacggttgttggatcttgtatgagttctaccttgatcgatcactcagagacaagaaacaaaaggtgaaagactatgttctttgtctactacgaaaaaatggtgaaccccaaaccaagatcgaaaagaagagaaagcaacgtgaagaggaagaggttcttgaacacaattatgcttatgatgatggagaaaactatagggagcaagaagagtttcttgagccacaagcaaagcgacaacaaattgtaccatccattgataatattgcaacagtaccaatgccatcagaagatgatgcattcgcagctgaagtagaagggttattgccatgctctgaagatgataatgtaccctcaagagctgaagcaattgggtttcaaggtgaggagaatggggaagtgcaacaattagcttccgaggtgcaatcatgcccttcatttggagattatcatggaatatttaatccactaccagaggaagattttctcttggaggaaatggtagaagaaatgggtatggtagaaatggaagacctgctagttgttaatggtgcaaatagtaatatggatgtggccgaagaaaacgtgctaaacagcacccttcttcacactcccacatcatccatgtctgcggcctatgatggcactgatatgccatatttatccatgaaaaatggttgcactgatccagctggaagcaacaatatttgtggaggatcaattggctttcagggtggtgcgtactggcctgagtctttagtggaggtcccaactgaagagaaacaaaagacagctgatggagattgttcagattggttggactcaatcagttttagtcctgaggaaaacaacttcctttggagtgaagtgcaatggtgttcgcagctgaccttggcatgcaatgctcttattgcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

442

Amino Acids

50.09

Weight (kDa)

4.54

Isoelectric Point (pI)

61.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 80
Acc36I ACCTGC 1 cut(s) 954
AccB1I GGYRCC 2 cut(s) 121, 308
AccBSI CCGCTC 1 cut(s) 111
AccI GTMKAC 1 cut(s) 499
AccII CGCG 1 cut(s) 285
AciI CCGC 2 cut(s) 111, 1043
AclWI GGATC 3 cut(s) 434, 1091, 1135
AcoI YGGCCR 1 cut(s) 984
AcuI CTGAAG 4 cut(s) 741, 768, 795, 1206
AcyI GRCGYC 1 cut(s) 192
AfaI GTAC 5 cut(s) 288, 660, 687, 762, 1154
AfiI CCNNNNNNNGG 2 cut(s) 70, 851
AflII CTTAAG 1 cut(s) 220
AgsI TTSAA 3 cut(s) 376, 575, 791
AhlI ACTAGT 1 cut(s) 79
AjnI CCWGG 3 cut(s) 46, 124, 311
AluBI AGCT 6 cut(s) 719, 773, 824, 1103, 1205, 1297
AluI AGCT 6 cut(s) 719, 773, 824, 1103, 1205, 1297
Alw21I GWGCWC 1 cut(s) 414
Alw26I GTCTC 2 cut(s) 347, 456
Alw44I GTGCAC 1 cut(s) 410
AlwI GGATC 3 cut(s) 434, 1091, 1135
AoxI GGCC 3 cut(s) 984, 1044, 1157
ApaLI GTGCAC 1 cut(s) 410
ApeKI GCWGC 3 cut(s) 4, 716, 1294
Asp700I GAANNNNTTC 3 cut(s) 567, 624, 894
AspLEI GCGC 1 cut(s) 285
AspS9I GGNCC 1 cut(s) 1177
AsuHPI GGTGA 4 cut(s) 158, 490, 527, 806
AvaII GGWCC 1 cut(s) 1177
AxyI CCTNAGG 1 cut(s) 1251
BaeGI GKGCMC 1 cut(s) 414
BanI GGYRCC 2 cut(s) 121, 308
BauI CACGAG 1 cut(s) 137
BbsI GAAGAC 2 cut(s) 214, 948
Bbv12I GWGCWC 1 cut(s) 414
BbvI GCAGC 3 cut(s) 16, 728, 1306
BccI CCATC 5 cut(s) 590, 670, 703, 1046, 1202
BceAI ACGGC 2 cut(s) 276, 281
BcgI CGANNNNNNTGC 2 cut(s) 118, 152
BciT130I CCWGG 3 cut(s) 48, 126, 313
BcoDI GTCTC 2 cut(s) 347, 456
BcuI ACTAGT 1 cut(s) 79
BfaI CTAG 3 cut(s) 80, 950, 1327
BfmI CTRYAG 1 cut(s) 607
BfrI CTTAAG 1 cut(s) 220
BfuAI ACCTGC 1 cut(s) 954
BisI GCNGC 4 cut(s) 5, 717, 1044, 1295
BlsI GCNGC 4 cut(s) 6, 718, 1045, 1296
Bme1390I CCNGG 3 cut(s) 48, 126, 313
Bme18I GGWCC 1 cut(s) 1177
BmgT120I GGNCC 1 cut(s) 1177
BmiI GGNNCC 3 cut(s) 123, 310, 1179
BmrFI CCNGG 3 cut(s) 48, 126, 313
BmsI GCATC 2 cut(s) 413, 697
BpiI GAAGAC 2 cut(s) 214, 948
BpuEI CTTGAG 3 cut(s) 80, 650, 751
Bsa29I ATCGAT 1 cut(s) 451
BsaHI GRCGYC 1 cut(s) 192
BsaJI CCNNGG 5 cut(s) 46, 66, 176, 828, 1302
Bsc4I CCNNNNNNNGG 2 cut(s) 70, 851
Bse1I ACTGG 3 cut(s) 338, 361, 1160
Bse21I CCTNAGG 1 cut(s) 1251
Bse3DI GCAATG 3 cut(s) 24, 1289, 1318
BseBI CCWGG 3 cut(s) 48, 126, 313
BseCI ATCGAT 1 cut(s) 451
BseDI CCNNGG 5 cut(s) 46, 66, 176, 828, 1302
BseGI GGATG 3 cut(s) 662, 985, 1031
BseLI CCNNNNNNNGG 2 cut(s) 70, 851
BseMI GCAATG 3 cut(s) 24, 1289, 1318
BseMII CTCAG 3 cut(s) 472, 1152, 1242
BseNI ACTGG 3 cut(s) 338, 361, 1160
BseRI GAGGAG 2 cut(s) 38, 812
BseSI GKGCMC 1 cut(s) 414
BseXI GCAGC 3 cut(s) 16, 728, 1306
Bsh1236I CGCG 1 cut(s) 285
BshFI GGCC 3 cut(s) 986, 1046, 1159
BshNI GGYRCC 2 cut(s) 121, 308
BshVI ATCGAT 1 cut(s) 451
BsiHKAI GWGCWC 1 cut(s) 414
BsiSI CCGG 1 cut(s) 330
BsiWI CGTACG 1 cut(s) 286
BslFI GGGAC 2 cut(s) 203, 1163
BslI CCNNNNNNNGG 2 cut(s) 70, 851
BsmAI GTCTC 2 cut(s) 347, 456
BsmFI GGGAC 2 cut(s) 203, 1163
BsmI GAATGC 1 cut(s) 710
BsnI GGCC 3 cut(s) 986, 1046, 1159
Bsp1286I GDGCHC 1 cut(s) 414
Bsp143I GATC 6 cut(s) 426, 448, 452, 531, 1096, 1127
Bsp19I CCATGG 1 cut(s) 66
BspACI CCGC 2 cut(s) 111, 1043
BspANI GGCC 3 cut(s) 986, 1046, 1159
BspCNI CTCAG 3 cut(s) 471, 1153, 1243
BspDI ATCGAT 1 cut(s) 451
BspFNI CGCG 1 cut(s) 285
BspLI GGNNCC 3 cut(s) 123, 310, 1179
BspMI ACCTGC 1 cut(s) 954
BspPI GGATC 3 cut(s) 434, 1091, 1135
BspT107I GGYRCC 2 cut(s) 121, 308
BspTI CTTAAG 1 cut(s) 220
BsrBI CCGCTC 1 cut(s) 111
BsrDI GCAATG 3 cut(s) 24, 1289, 1318
BsrI ACTGG 3 cut(s) 338, 361, 1160
BssECI CCNNGG 5 cut(s) 46, 66, 176, 828, 1302
BssMI GATC 6 cut(s) 426, 448, 452, 531, 1096, 1127
BssNI GRCGYC 1 cut(s) 192
BssSI CACGAG 1 cut(s) 137
BssT1I CCWWGG 3 cut(s) 66, 176, 1302
Bst2BI CACGAG 1 cut(s) 137
Bst2UI CCWGG 3 cut(s) 48, 126, 313
Bst4CI ACNGT 4 cut(s) 152, 164, 419, 685
Bst6I CTCTTC 6 cut(s) 92, 536, 552, 558, 615, 1182
BstACI GRCGYC 1 cut(s) 192
BstAFI CTTAAG 1 cut(s) 220
BstAPI GCANNNNNTGC 1 cut(s) 1313
BstC8I GCNNGC 2 cut(s) 335, 1309
BstDEI CTNAG 3 cut(s) 458, 1161, 1251
BstDSI CCRYGG 1 cut(s) 66
BstEII GGTNACC 1 cut(s) 164
BstF5I GGATG 3 cut(s) 662, 985, 1031
BstFNI CGCG 1 cut(s) 285
BstHHI GCGC 1 cut(s) 285
BstKTI GATC 6 cut(s) 429, 451, 455, 534, 1099, 1130
BstMAI GTCTC 2 cut(s) 347, 456
BstMBI GATC 6 cut(s) 426, 448, 452, 531, 1096, 1127
BstMWI GCNNNNNNNGC 3 cut(s) 716, 1313, 1322
BstNI CCWGG 3 cut(s) 48, 126, 313
BstNSI RCATGY 1 cut(s) 1311
BstPI GGTNACC 1 cut(s) 164
BstSCI CCNGG 3 cut(s) 46, 124, 311
BstSFI CTRYAG 1 cut(s) 607
BstSLI GKGCMC 1 cut(s) 414
BstUI CGCG 1 cut(s) 285
BstV1I GCAGC 3 cut(s) 16, 728, 1306
BstV2I GAAGAC 2 cut(s) 214, 948
BstX2I RGATCY 1 cut(s) 426
BstYI RGATCY 1 cut(s) 426
Bsu15I ATCGAT 1 cut(s) 451
Bsu36I CCTNAGG 1 cut(s) 1251
BsuRI GGCC 3 cut(s) 986, 1046, 1159
BsuTUI ATCGAT 1 cut(s) 451
BtgI CCRYGG 1 cut(s) 66
BtgZI GCGATG 1 cut(s) 336
BtsCI GGATG 3 cut(s) 662, 985, 1031
BtsIMutI CAGTG 2 cut(s) 1056, 1092
BveI ACCTGC 1 cut(s) 954
Cac8I GCNNGC 2 cut(s) 335, 1309
CfoI GCGC 1 cut(s) 285
Cfr13I GGNCC 1 cut(s) 1177
ClaI ATCGAT 1 cut(s) 451
CseI GACGC 1 cut(s) 200
Csp6I GTAC 5 cut(s) 287, 659, 686, 761, 1153
CspCI CAANNNNNGTGG 2 cut(s) 1102, 1137
CviAII CATG 8 cut(s) 67, 103, 741, 840, 863, 1036, 1078, 1308
CviQI GTAC 5 cut(s) 287, 659, 686, 761, 1153
DdeI CTNAG 3 cut(s) 458, 1161, 1251
DpnI GATC 6 cut(s) 428, 450, 454, 533, 1098, 1129
DpnII GATC 6 cut(s) 426, 448, 452, 531, 1096, 1127
DrdI GACNNNNNNGTC 1 cut(s) 80
DseDI GACNNNNNNGTC 1 cut(s) 80
EaeI YGGCCR 1 cut(s) 984
Eam1104I CTCTTC 6 cut(s) 92, 536, 552, 558, 615, 1182
EarI CTCTTC 6 cut(s) 92, 536, 552, 558, 615, 1182
Eco130I CCWWGG 3 cut(s) 66, 176, 1302
Eco47I GGWCC 1 cut(s) 1177
Eco57I CTGAAG 4 cut(s) 741, 768, 795, 1206
Eco81I CCTNAGG 1 cut(s) 1251
Eco91I GGTNACC 1 cut(s) 164
EcoO109I RGGNCCY 1 cut(s) 1177
EcoO65I GGTNACC 1 cut(s) 164
EcoRII CCWGG 3 cut(s) 46, 124, 311
EcoT14I CCWWGG 3 cut(s) 66, 176, 1302
EcoT22I ATGCAT 1 cut(s) 712
ErhI CCWWGG 3 cut(s) 66, 176, 1302
FaeI CATG 8 cut(s) 70, 106, 744, 843, 866, 1039, 1081, 1311
FalI AAGNNNNNCTT 6 cut(s) 373, 405, 555, 587, 612, 644
FaqI GGGAC 2 cut(s) 203, 1163
FatI CATG 8 cut(s) 66, 102, 740, 839, 862, 1035, 1077, 1307
FblI GTMKAC 1 cut(s) 499
Fnu4HI GCNGC 4 cut(s) 5, 717, 1044, 1295
FokI GGATG 3 cut(s) 649, 992, 1018
Fsp4HI GCNGC 4 cut(s) 5, 717, 1044, 1295
FspBI CTAG 3 cut(s) 80, 950, 1327
GlaI GCGC 1 cut(s) 284
GluI GCNGC 4 cut(s) 5, 717, 1044, 1295
HaeIII GGCC 3 cut(s) 986, 1046, 1159
HapII CCGG 1 cut(s) 330
HgaI GACGC 1 cut(s) 200
HhaI GCGC 1 cut(s) 285
Hin1I GRCGYC 1 cut(s) 192
Hin1II CATG 8 cut(s) 70, 106, 744, 843, 866, 1039, 1081, 1311
Hin6I GCGC 1 cut(s) 283
HinP1I GCGC 1 cut(s) 283
HinfI GANTC 3 cut(s) 326, 1163, 1232
HpaII CCGG 1 cut(s) 330
HphI GGTGA 4 cut(s) 158, 490, 527, 806
Hpy166II GTNNAC 3 cut(s) 412, 500, 518
Hpy188I TCNGA 5 cut(s) 461, 700, 748, 829, 1222
Hpy188III TCNNGA 4 cut(s) 572, 629, 768, 1250
Hpy8I GTNNAC 3 cut(s) 412, 500, 518
HpyAV CCTTC 5 cut(s) 112, 310, 722, 855, 1022
HpyCH4III ACNGT 4 cut(s) 152, 164, 419, 685
HpyCH4IV ACGT 2 cut(s) 553, 996
HpyF10VI GCNNNNNNNGC 3 cut(s) 716, 1313, 1322
HpyF3I CTNAG 3 cut(s) 458, 1161, 1251
HpySE526I ACGT 2 cut(s) 553, 996
Hsp92I GRCGYC 1 cut(s) 192
Hsp92II CATG 8 cut(s) 70, 106, 744, 843, 866, 1039, 1081, 1311
HspAI GCGC 1 cut(s) 283
Kzo9I GATC 6 cut(s) 426, 448, 452, 531, 1096, 1127
LmnI GCTCC 1 cut(s) 613
Lsp1109I GCAGC 3 cut(s) 16, 728, 1306
LweI GCATC 2 cut(s) 413, 697
MaeI CTAG 3 cut(s) 80, 950, 1327
MaeII ACGT 2 cut(s) 553, 996
MaeIII GTNAC 2 cut(s) 152, 164
MalI GATC 6 cut(s) 428, 450, 454, 533, 1098, 1129
MbiI CCGCTC 1 cut(s) 111
MboI GATC 6 cut(s) 426, 448, 452, 531, 1096, 1127
MfeI CAATTG 2 cut(s) 780, 1131
MflI RGATCY 1 cut(s) 426
MhlI GDGCHC 1 cut(s) 414
MluCI AATT 5 cut(s) 580, 654, 780, 818, 1131
MlyI GAGTC 3 cut(s) 320, 1172, 1226
MmeI TCCRAC 3 cut(s) 280, 404, 1209
Mph1103I ATGCAT 1 cut(s) 712
MroXI GAANNNNTTC 3 cut(s) 567, 624, 894
MseI TTAA 4 cut(s) 221, 248, 873, 957
MslI CAYNNNNRTG 2 cut(s) 582, 1061
MspA1I CMGCKG 4 cut(s) 719, 1103, 1205, 1297
MspCI CTTAAG 1 cut(s) 220
MspI CCGG 1 cut(s) 330
MspR9I CCNGG 3 cut(s) 48, 126, 313
MunI CAATTG 2 cut(s) 780, 1131
Mva1269I GAATGC 1 cut(s) 710
MvaI CCWGG 3 cut(s) 48, 126, 313
MvnI CGCG 1 cut(s) 285
MwoI GCNNNNNNNGC 3 cut(s) 716, 1313, 1322
NcoI CCATGG 1 cut(s) 66
NdeII GATC 6 cut(s) 426, 448, 452, 531, 1096, 1127
NlaIII CATG 8 cut(s) 70, 106, 744, 843, 866, 1039, 1081, 1311
NlaIV GGNNCC 3 cut(s) 123, 310, 1179
NmuCI GTSAC 2 cut(s) 152, 164
NsiI ATGCAT 1 cut(s) 712
NspI RCATGY 1 cut(s) 1311
PaeI GCATGC 1 cut(s) 1311
PctI GAATGC 1 cut(s) 710
PdmI GAANNNNTTC 3 cut(s) 567, 624, 894
Pfl23II CGTACG 1 cut(s) 286
PkrI GCNGC 4 cut(s) 6, 718, 1045, 1296
PleI GAGTC 3 cut(s) 320, 1171, 1226
PpsI GAGTC 3 cut(s) 320, 1171, 1226
PpuMI RGGWCCY 1 cut(s) 1177
Psp5II RGGWCCY 1 cut(s) 1177
Psp6I CCWGG 3 cut(s) 46, 124, 311
PspEI GGTNACC 1 cut(s) 164
PspGI CCWGG 3 cut(s) 46, 124, 311
PspLI CGTACG 1 cut(s) 286
PspN4I GGNNCC 3 cut(s) 123, 310, 1179
PspPI GGNCC 1 cut(s) 1177
PspPPI RGGWCCY 1 cut(s) 1177
PsuI RGATCY 1 cut(s) 426
PvuII CAGCTG 4 cut(s) 719, 1103, 1205, 1297
RsaI GTAC 5 cut(s) 288, 660, 687, 762, 1154
RsaNI GTAC 5 cut(s) 287, 659, 686, 761, 1153
RseI CAYNNNNRTG 2 cut(s) 582, 1061
SaqAI TTAA 4 cut(s) 221, 248, 873, 957
SatI GCNGC 4 cut(s) 5, 717, 1044, 1295
Sau3AI GATC 6 cut(s) 426, 448, 452, 531, 1096, 1127
Sau96I GGNCC 1 cut(s) 1177
SchI GAGTC 3 cut(s) 320, 1172, 1226
ScrFI CCNGG 3 cut(s) 48, 126, 313
SduI GDGCHC 1 cut(s) 414
SfaNI GCATC 2 cut(s) 413, 697
SfcI CTRYAG 1 cut(s) 607
SinI GGWCC 1 cut(s) 1177
SmiMI CAYNNNNRTG 2 cut(s) 582, 1061
SmlI CTYRAG 4 cut(s) 95, 220, 629, 766
SmoI CTYRAG 4 cut(s) 95, 220, 629, 766
SpeI ACTAGT 1 cut(s) 79
SphI GCATGC 1 cut(s) 1311
Sse9I AATT 5 cut(s) 580, 654, 780, 818, 1131
SsiI CCGC 2 cut(s) 111, 1043
SspI AATATT 3 cut(s) 676, 870, 1117
SspMI CTAG 3 cut(s) 80, 950, 1327
StyD4I CCNGG 3 cut(s) 46, 124, 311
StyI CCWWGG 3 cut(s) 66, 176, 1302
TaaI ACNGT 4 cut(s) 152, 164, 419, 685
TaiI ACGT 2 cut(s) 556, 999
TaqI TCGA 2 cut(s) 451, 534
TasI AATT 5 cut(s) 580, 654, 780, 818, 1131
TauI GCSGC 1 cut(s) 1046
Tru1I TTAA 4 cut(s) 221, 248, 873, 957
Tru9I TTAA 4 cut(s) 221, 248, 873, 957
TscAI CASTG 2 cut(s) 1063, 1099
TseFI GTSAC 2 cut(s) 152, 164
TseI GCWGC 3 cut(s) 4, 716, 1294
Tsp45I GTSAC 2 cut(s) 152, 164
TspDTI ATGAA 2 cut(s) 837, 1094
TspRI CASTG 2 cut(s) 1063, 1099
Vha464I CTTAAG 1 cut(s) 220
VneI GTGCAC 1 cut(s) 410
VpaK11BI GGWCC 1 cut(s) 1177
XceI RCATGY 1 cut(s) 1311
XmiI GTMKAC 1 cut(s) 499
XmnI GAANNNNTTC 3 cut(s) 567, 624, 894
XspI CTAG 3 cut(s) 80, 950, 1327
Zsp2I ATGCAT 1 cut(s) 712
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.