Rw0G000390
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00010
OG0000076
Physical Location & Seq
Forward (+)
16090 .. 17358
1269 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G000390.1

Sequence Viewer

Length: 1203 bp
ATGGAGGAGAGCAGACGCAATCACCTTCCTGGCCAGAGGTTCTGCCCCATGGAAGATGAACTAGTTCTCTTCTACCTCAAGCCCATGTTGAGCGGACAGAACGTGCCCGGCAGAAACCGCGTGGTGTTCGACTGCGACCTCTACGGTCACCAAGAACCTTGGGAGATATGGGAGGCCTTCAAGACCAAAAGACCACACGACTTGAGGCTCAACAAGGACATCTACTTCTTCACCCAACACAAGAAGATGAGTTCCACAGACAAGCGTGTGCGCCGGAATGTTGGAAGTGGCACCTGGAAGGGCGACGACTCCGGCAAGCCAGTACGATCTGTTGAAACTGGTCGTGCTGTTGGCTTGAAGAAAAGATATGCTTACAAGAACGAAGACTCGGTGCACAACGGCTGTTGGATCTTGCATGAGTTCTACCTTGATCGATCACTCAGAGACAAGAAACAAATAAGAAAGAAACGTGAAGAGGAAGAGGTTCTTGAAAACAATTATGCCTTGGATGATGGAGAAAACTCAAATAGGGAGCAAGAAGAGTTGCTTGAGCCACAAGCGAAGCGGCAACGAACGGTGCCATCCATTGATAATGCACCACTAACAATGCCATCAGAAGATGATGCTGCATTCGCAGCTGAACTAGAAGAGTCATTGGAATGCTTTGAAGATGATAATGCACCCTCAGAAGCTCACGCAATTGACTTTCAAGGTGAGGAAAATGGTGGACAGCAACCATTAGCCGAGATGCAGGCAGGCCCTTCATTCGGGGACGATCATGGGATATTTAATATGCTGCCGGAGGAAGATTTTCTCTGGGAGGAACTCTTAAAAGAAATGGGTATAGAAAAGGACGAACCAGTTCTTAATGGTGAGAGTAGTAATATAGATATGGCTGAAGAAAAGGAAAACAGCACCCTTCTTTATGCTCCCACATCATCCATGTCTGCGGCCTATGATGGTTGCAATGATATGCCATATTTATCCTCTGGAAAAGGTTGCCTTGATCCATCTGGAAGCAATAATGTGTGTGGAGGATCGATTGGCTTTCAGGATGGTGCATACTGGGTTGAGTCTTTGTTGGAGGTCCCAAGTACAGTTGAGCAACAAAAGACAGCTGATGAAGATTGTTCAGATTGGTTGGAGTCAATCAATTTTAGTCCTGAGGAGAACAACTTGCTTTGGAGTGACATGCAATGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

400

Amino Acids

45.61

Weight (kDa)

4.52

Isoelectric Point (pI)

66.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 10 - 142 1e-23 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 290, 577
AccBSI CCGCTC 1 cut(s) 93
AccII CGCG 1 cut(s) 120
AciI CCGC 4 cut(s) 93, 118, 565, 950
AclWI GGATC 3 cut(s) 416, 1001, 1045
AcoI YGGCCR 1 cut(s) 31
AcuI CTGAAG 1 cut(s) 918
AfaI GTAC 2 cut(s) 324, 1096
AfiI CCNNNNNNNGG 1 cut(s) 767
AgsI TTSAA 6 cut(s) 181, 335, 358, 491, 668, 710
AhlI ACTAGT 1 cut(s) 61
AjnI CCWGG 2 cut(s) 28, 293
AluBI AGCT 3 cut(s) 638, 692, 1118
AluI AGCT 3 cut(s) 638, 692, 1118
Alw21I GWGCWC 1 cut(s) 396
Alw26I GTCTC 1 cut(s) 438
Alw44I GTGCAC 1 cut(s) 392
AlwI GGATC 3 cut(s) 416, 1001, 1045
AoxI GGCC 4 cut(s) 31, 174, 757, 951
ApaLI GTGCAC 1 cut(s) 392
ApeKI GCWGC 3 cut(s) 626, 635, 796
Asp700I GAANNNNTTC 4 cut(s) 63, 483, 810, 861
AspLEI GCGC 1 cut(s) 273
AspS9I GGNCC 2 cut(s) 758, 1087
AsuC2I CCSGG 1 cut(s) 108
AsuHPI GGTGA 5 cut(s) 14, 140, 223, 725, 884
AvaII GGWCC 1 cut(s) 1087
AxyI CCTNAGG 1 cut(s) 1164
BaeGI GKGCMC 2 cut(s) 108, 396
BalI TGGCCA 1 cut(s) 33
BanI GGYRCC 2 cut(s) 290, 577
BbsI GAAGAC 1 cut(s) 390
Bbv12I GWGCWC 1 cut(s) 396
BbvI GCAGC 3 cut(s) 613, 647, 783
BccI CCATC 6 cut(s) 506, 589, 619, 953, 1018, 1049
BceAI ACGGC 1 cut(s) 415
BciT130I CCWGG 2 cut(s) 30, 295
BcnI CCSGG 1 cut(s) 108
BcoDI GTCTC 1 cut(s) 438
BcuI ACTAGT 1 cut(s) 61
BfaI CTAG 2 cut(s) 62, 644
BisI GCNGC 5 cut(s) 566, 627, 636, 797, 951
BlsI GCNGC 5 cut(s) 567, 628, 637, 798, 952
Bme1390I CCNGG 3 cut(s) 30, 108, 295
Bme18I GGWCC 1 cut(s) 1087
BmgT120I GGNCC 2 cut(s) 758, 1087
BmiI GGNNCC 3 cut(s) 292, 579, 1089
BmrFI CCNGG 3 cut(s) 30, 108, 295
BmrI ACTGGG 1 cut(s) 1075
BmsI GCATC 2 cut(s) 613, 738
BmuI ACTGGG 1 cut(s) 1075
BpiI GAAGAC 1 cut(s) 390
BpuEI CTTGAG 3 cut(s) 62, 223, 569
BpuMI CCSGG 1 cut(s) 108
Bsa29I ATCGAT 2 cut(s) 433, 1040
BsaJI CCNNGG 3 cut(s) 48, 158, 504
Bsc4I CCNNNNNNNGG 1 cut(s) 767
Bse1I ACTGG 4 cut(s) 320, 343, 860, 1070
Bse21I CCTNAGG 1 cut(s) 1164
Bse3DI GCAATG 2 cut(s) 973, 1202
BseBI CCWGG 2 cut(s) 30, 295
BseCI ATCGAT 2 cut(s) 433, 1040
BseDI CCNNGG 3 cut(s) 48, 158, 504
BseGI GGATG 4 cut(s) 514, 581, 938, 1060
BseLI CCNNNNNNNGG 1 cut(s) 767
BseMI GCAATG 2 cut(s) 973, 1202
BseMII CTCAG 3 cut(s) 454, 699, 1155
BseNI ACTGG 4 cut(s) 320, 343, 860, 1070
BseRI GAGGAG 2 cut(s) 20, 1181
BseSI GKGCMC 2 cut(s) 108, 396
BseXI GCAGC 3 cut(s) 613, 647, 783
Bsh1236I CGCG 1 cut(s) 120
BshFI GGCC 4 cut(s) 33, 176, 759, 953
BshNI GGYRCC 2 cut(s) 290, 577
BshVI ATCGAT 2 cut(s) 433, 1040
BsiHKAI GWGCWC 1 cut(s) 396
BsiSI CCGG 4 cut(s) 108, 274, 312, 800
BslFI GGGAC 2 cut(s) 785, 1073
BslI CCNNNNNNNGG 1 cut(s) 767
BsmAI GTCTC 1 cut(s) 438
BsmFI GGGAC 2 cut(s) 785, 1073
BsmI GAATGC 2 cut(s) 629, 665
BsnI GGCC 4 cut(s) 33, 176, 759, 953
Bsp1286I GDGCHC 2 cut(s) 108, 396
Bsp143I GATC 7 cut(s) 326, 408, 430, 434, 775, 1006, 1037
Bsp19I CCATGG 1 cut(s) 48
BspACI CCGC 4 cut(s) 93, 118, 565, 950
BspANI GGCC 4 cut(s) 33, 176, 759, 953
BspCNI CTCAG 3 cut(s) 453, 698, 1156
BspDI ATCGAT 2 cut(s) 433, 1040
BspFNI CGCG 1 cut(s) 120
BspLI GGNNCC 3 cut(s) 292, 579, 1089
BspPI GGATC 3 cut(s) 416, 1001, 1045
BspT107I GGYRCC 2 cut(s) 290, 577
BsrBI CCGCTC 1 cut(s) 93
BsrDI GCAATG 2 cut(s) 973, 1202
BsrI ACTGG 4 cut(s) 320, 343, 860, 1070
BssECI CCNNGG 3 cut(s) 48, 158, 504
BssMI GATC 7 cut(s) 326, 408, 430, 434, 775, 1006, 1037
BssT1I CCWWGG 3 cut(s) 48, 158, 504
Bst2UI CCWGG 2 cut(s) 30, 295
Bst4CI ACNGT 3 cut(s) 146, 577, 1099
Bst6I CTCTTC 5 cut(s) 74, 468, 474, 534, 642
BstC8I GCNNGC 3 cut(s) 317, 753, 757
BstDEI CTNAG 3 cut(s) 440, 685, 1164
BstDSI CCRYGG 1 cut(s) 48
BstEII GGTNACC 1 cut(s) 146
BstF5I GGATG 4 cut(s) 514, 581, 938, 1060
BstFNI CGCG 1 cut(s) 120
BstHHI GCGC 1 cut(s) 273
BstKTI GATC 7 cut(s) 329, 411, 433, 437, 778, 1009, 1040
BstMAI GTCTC 1 cut(s) 438
BstMBI GATC 7 cut(s) 326, 408, 430, 434, 775, 1006, 1037
BstMWI GCNNNNNNNGC 3 cut(s) 117, 632, 635
BstNI CCWGG 2 cut(s) 30, 295
BstNSI RCATGY 1 cut(s) 1195
BstPI GGTNACC 1 cut(s) 146
BstSCI CCNGG 3 cut(s) 28, 106, 293
BstSLI GKGCMC 2 cut(s) 108, 396
BstUI CGCG 1 cut(s) 120
BstV1I GCAGC 3 cut(s) 613, 647, 783
BstV2I GAAGAC 1 cut(s) 390
BstX2I RGATCY 1 cut(s) 408
BstYI RGATCY 1 cut(s) 408
Bsu15I ATCGAT 2 cut(s) 433, 1040
Bsu36I CCTNAGG 1 cut(s) 1164
BsuRI GGCC 4 cut(s) 33, 176, 759, 953
BsuTUI ATCGAT 2 cut(s) 433, 1040
BtgI CCRYGG 1 cut(s) 48
BtsCI GGATG 4 cut(s) 514, 581, 938, 1060
Cac8I GCNNGC 3 cut(s) 317, 753, 757
CfoI GCGC 1 cut(s) 273
Cfr13I GGNCC 2 cut(s) 758, 1087
ClaI ATCGAT 2 cut(s) 433, 1040
CseI GACGC 1 cut(s) 24
Csp6I GTAC 2 cut(s) 323, 1095
CspCI CAANNNNNGTGG 2 cut(s) 183, 218
CviAII CATG 6 cut(s) 49, 85, 416, 779, 943, 1192
CviQI GTAC 2 cut(s) 323, 1095
DdeI CTNAG 3 cut(s) 440, 685, 1164
DpnI GATC 7 cut(s) 328, 410, 432, 436, 777, 1008, 1039
DpnII GATC 7 cut(s) 326, 408, 430, 434, 775, 1006, 1037
EaeI YGGCCR 1 cut(s) 31
Eam1104I CTCTTC 5 cut(s) 74, 468, 474, 534, 642
EarI CTCTTC 5 cut(s) 74, 468, 474, 534, 642
Eco130I CCWWGG 3 cut(s) 48, 158, 504
Eco147I AGGCCT 1 cut(s) 176
Eco47I GGWCC 1 cut(s) 1087
Eco57I CTGAAG 1 cut(s) 918
Eco81I CCTNAGG 1 cut(s) 1164
Eco91I GGTNACC 1 cut(s) 146
EcoO109I RGGNCCY 2 cut(s) 758, 1087
EcoO65I GGTNACC 1 cut(s) 146
EcoRII CCWGG 2 cut(s) 28, 293
EcoT14I CCWWGG 3 cut(s) 48, 158, 504
ErhI CCWWGG 3 cut(s) 48, 158, 504
FaeI CATG 6 cut(s) 52, 88, 419, 782, 946, 1195
FalI AAGNNNNNCTT 8 cut(s) 355, 387, 471, 503, 531, 563, 987, 1019
FaqI GGGAC 2 cut(s) 785, 1073
FatI CATG 6 cut(s) 48, 84, 415, 778, 942, 1191
Fnu4HI GCNGC 5 cut(s) 566, 627, 636, 797, 951
FokI GGATG 4 cut(s) 521, 568, 925, 1067
Fsp4HI GCNGC 5 cut(s) 566, 627, 636, 797, 951
FspBI CTAG 2 cut(s) 62, 644
GlaI GCGC 1 cut(s) 272
GluI GCNGC 5 cut(s) 566, 627, 636, 797, 951
HaeIII GGCC 4 cut(s) 33, 176, 759, 953
HapII CCGG 4 cut(s) 108, 274, 312, 800
HgaI GACGC 1 cut(s) 24
HhaI GCGC 1 cut(s) 273
Hin1II CATG 6 cut(s) 52, 88, 419, 782, 946, 1195
Hin6I GCGC 1 cut(s) 271
HinP1I GCGC 1 cut(s) 271
HinfI GANTC 5 cut(s) 308, 386, 650, 1073, 1145
HpaII CCGG 4 cut(s) 108, 274, 312, 800
HphI GGTGA 5 cut(s) 14, 140, 223, 725, 884
Hpy166II GTNNAC 2 cut(s) 394, 728
Hpy188I TCNGA 4 cut(s) 443, 616, 688, 1135
Hpy188III TCNNGA 6 cut(s) 181, 488, 990, 1014, 1052, 1163
Hpy8I GTNNAC 2 cut(s) 394, 728
Hpy99I CGWCG 1 cut(s) 308
HpyAV CCTTC 5 cut(s) 35, 187, 292, 771, 929
HpyCH4III ACNGT 3 cut(s) 146, 577, 1099
HpyCH4IV ACGT 2 cut(s) 102, 469
HpyCH4V TGCA 9 cut(s) 394, 415, 596, 629, 680, 751, 966, 1061, 1195
HpyF10VI GCNNNNNNNGC 3 cut(s) 117, 632, 635
HpyF3I CTNAG 3 cut(s) 440, 685, 1164
HpySE526I ACGT 2 cut(s) 102, 469
Hsp92II CATG 6 cut(s) 52, 88, 419, 782, 946, 1195
HspAI GCGC 1 cut(s) 271
Kzo9I GATC 7 cut(s) 326, 408, 430, 434, 775, 1006, 1037
LmnI GCTCC 2 cut(s) 532, 934
Lsp1109I GCAGC 3 cut(s) 613, 647, 783
LweI GCATC 2 cut(s) 613, 738
MaeI CTAG 2 cut(s) 62, 644
MaeII ACGT 2 cut(s) 102, 469
MaeIII GTNAC 2 cut(s) 146, 1187
MalI GATC 7 cut(s) 328, 410, 432, 436, 777, 1008, 1039
MbiI CCGCTC 1 cut(s) 93
MboI GATC 7 cut(s) 326, 408, 430, 434, 775, 1006, 1037
MfeI CAATTG 1 cut(s) 699
MflI RGATCY 1 cut(s) 408
MhlI GDGCHC 2 cut(s) 108, 396
MlsI TGGCCA 1 cut(s) 33
MluCI AATT 3 cut(s) 496, 699, 1153
MluNI TGGCCA 1 cut(s) 33
MlyI GAGTC 5 cut(s) 302, 380, 659, 1082, 1154
MmeI TCCRAC 4 cut(s) 262, 386, 1062, 1122
Mox20I TGGCCA 1 cut(s) 33
MroXI GAANNNNTTC 4 cut(s) 63, 483, 810, 861
MscI TGGCCA 1 cut(s) 33
MseI TTAA 3 cut(s) 789, 830, 867
MslI CAYNNNNRTG 1 cut(s) 658
Msp20I TGGCCA 1 cut(s) 33
MspA1I CMGCKG 2 cut(s) 638, 1118
MspI CCGG 4 cut(s) 108, 274, 312, 800
MspR9I CCNGG 3 cut(s) 30, 108, 295
MunI CAATTG 1 cut(s) 699
Mva1269I GAATGC 2 cut(s) 629, 665
MvaI CCWGG 2 cut(s) 30, 295
MvnI CGCG 1 cut(s) 120
MwoI GCNNNNNNNGC 3 cut(s) 117, 632, 635
NciI CCSGG 1 cut(s) 108
NcoI CCATGG 1 cut(s) 48
NdeII GATC 7 cut(s) 326, 408, 430, 434, 775, 1006, 1037
NlaIII CATG 6 cut(s) 52, 88, 419, 782, 946, 1195
NlaIV GGNNCC 3 cut(s) 292, 579, 1089
NmeAIII GCCGAG 1 cut(s) 769
NmuCI GTSAC 2 cut(s) 146, 1187
NspI RCATGY 1 cut(s) 1195
PceI AGGCCT 1 cut(s) 176
PctI GAATGC 2 cut(s) 629, 665
PdmI GAANNNNTTC 4 cut(s) 63, 483, 810, 861
PkrI GCNGC 5 cut(s) 567, 628, 637, 798, 952
PleI GAGTC 5 cut(s) 302, 380, 658, 1081, 1153
PpsI GAGTC 5 cut(s) 302, 380, 658, 1081, 1153
PpuMI RGGWCCY 1 cut(s) 1087
Psp5II RGGWCCY 1 cut(s) 1087
Psp6I CCWGG 2 cut(s) 28, 293
PspEI GGTNACC 1 cut(s) 146
PspGI CCWGG 2 cut(s) 28, 293
PspN4I GGNNCC 3 cut(s) 292, 579, 1089
PspPI GGNCC 2 cut(s) 758, 1087
PspPPI RGGWCCY 1 cut(s) 1087
PsuI RGATCY 1 cut(s) 408
PvuII CAGCTG 2 cut(s) 638, 1118
RsaI GTAC 2 cut(s) 324, 1096
RsaNI GTAC 2 cut(s) 323, 1095
RseI CAYNNNNRTG 1 cut(s) 658
SaqAI TTAA 3 cut(s) 789, 830, 867
SatI GCNGC 5 cut(s) 566, 627, 636, 797, 951
Sau3AI GATC 7 cut(s) 326, 408, 430, 434, 775, 1006, 1037
Sau96I GGNCC 2 cut(s) 758, 1087
SchI GAGTC 5 cut(s) 302, 380, 659, 1082, 1154
ScrFI CCNGG 3 cut(s) 30, 108, 295
SduI GDGCHC 2 cut(s) 108, 396
SfaNI GCATC 2 cut(s) 613, 738
SinI GGWCC 1 cut(s) 1087
SmiMI CAYNNNNRTG 1 cut(s) 658
SmlI CTYRAG 3 cut(s) 77, 202, 548
SmoI CTYRAG 3 cut(s) 77, 202, 548
SpeI ACTAGT 1 cut(s) 61
Sse9I AATT 3 cut(s) 496, 699, 1153
SseBI AGGCCT 1 cut(s) 176
SsiI CCGC 4 cut(s) 93, 118, 565, 950
SspMI CTAG 2 cut(s) 62, 644
StuI AGGCCT 1 cut(s) 176
StyD4I CCNGG 3 cut(s) 28, 106, 293
StyI CCWWGG 3 cut(s) 48, 158, 504
TaaI ACNGT 3 cut(s) 146, 577, 1099
TaiI ACGT 2 cut(s) 105, 472
TaqI TCGA 3 cut(s) 129, 433, 1040
TasI AATT 3 cut(s) 496, 699, 1153
TatI WGTACW 1 cut(s) 1094
TauI GCSGC 2 cut(s) 568, 953
Tru1I TTAA 3 cut(s) 789, 830, 867
Tru9I TTAA 3 cut(s) 789, 830, 867
TseFI GTSAC 2 cut(s) 146, 1187
TseI GCWGC 3 cut(s) 626, 635, 796
Tsp45I GTSAC 2 cut(s) 146, 1187
TspDTI ATGAA 3 cut(s) 72, 753, 1137
VneI GTGCAC 1 cut(s) 392
VpaK11BI GGWCC 1 cut(s) 1087
XceI RCATGY 1 cut(s) 1195
XmnI GAANNNNTTC 4 cut(s) 63, 483, 810, 861
XspI CTAG 2 cut(s) 62, 644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.