FvH4_3g25560
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000076
Physical Location & Seq
Reverse (-)
18461482 .. 18463046
1565 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g25560.t1

Sequence Viewer

Length: 1428 bp
ATGCCTCTTCCGGGACAAAGATTTTGCCCCATGGAAGACGAACTCCTCATGTTCTACCTTGAGCCGAAGGTGAACGGGATGCCAGTGCCCGGCGACGGAGACGTTATCTACGAGTTGGATCTCTACGGTGACCAAGATCCATGGAAGATATGGCAAAGATACGAAGAAGAAAGGGCCAACGACTTGAGGAGGAACAAGGATCTCTATTTCTTCACCCAAAAGAAGAAGACGACTGCAAAAAGCTCGCGTGTAAAGCGCACAGTCGGGACTGGAGGTACTTGGAGAGGGCAGACGGCAGGCAAGGACGTCTTTCTTCTCGATGAGAATCAGCAGCCAACAACTACTGTTCTTGGTTTAAAGAAAACCTACACCTATAGGAACAAGGGGTCTGTGCATGACGGCCGATGGATCATGTATGAGTTTGAGCTTCATAAGTCACAACTCAAGAAACAAGTAAACAAGAACGACTATGTTCTTTGTTTACTTAGGAAGAACGATCTTCTGCAGGAAAAGAAGAGAAAAAGGCAACAAGAAGAGGAGAGTCTTGAAGACTATGTCGAGGACGACGAGGCAGTTAACACCGATCCTGAATCGGTTAGTGAGGAGGAGCCCCAAGAAAAACGACAACGTCTTCTCCCATCTTTAGAAGATGAACAAGAGCAGTTCTTGCAGCCAGCACCTTCATTAGAAGCTGAACAAGAAGCATTACCCACACCATTAGAAGATGATCCGGTGTTCTTGCAAGAGGGTGAGTTTATGGAATGGCAAGAATCGGACTTCGCTTCTCTAGAAGAGCTCTTGCAAGATGAATCTGAAGCAAGACCTACAGCACTAGAAGCTGAACAAGTTTCCTTGCTAGTTGATGAGAATTCAGGGCTGCAACAATTGGAAGCTGAACCTCAACTAGGGGAAGATAATCTAGAGCAGCAACTTGATGCAGTACCATTGTTTGCAGCTCAAAAGATATCGGGTGGCATTCAGTTTCACCCCGATGAAAATACGGTGCAGCAAGTGGGAGGTGAAGCCAATATGTATACTGAGAACTTGGGTGACGCTATGCATGGTGAAAACTGGCATATGTCTTTTGCCGAAGAGCTAATGAATGGTGAGCAGCCAAATACCATGGAAGAGGGAGAGCGGAATGCTGTTTATCCAGGTTTTGATGAACAAGTTTCCTTGCGAGTTGATGAGAATTCAGGGCTGAAACAATTGCAAGCTGAACCTCAACTAGGAGAAAAAAATCTGGAGCAGCAATTTGATGCAGTACCATTGTTTGCAGCTCAAGAAAACTGGTCTATGGAAGAACTAACGAAAGAGCTAATGAATGATGAGCTGCTAAATGCCATTGAAGTGGGAGACACTACCAGGACAAGCACTTTAGCCGACGAAAATTTTTCGTCGGCCTACTTTAGCCGACGAAACAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

476

Amino Acids

54.62

Weight (kDa)

4.35

Isoelectric Point (pI)

57.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 4 - 143 6.6e-24 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 309
AccBSI CCGCTC 1 cut(s) 1138
AccI GTMKAC 1 cut(s) 1034
AccII CGCG 1 cut(s) 247
AciI CCGC 1 cut(s) 1138
AclWI GGATC 6 cut(s) 126, 131, 207, 416, 578, 722
AcoI YGGCCR 1 cut(s) 400
AcsI RAATTY 3 cut(s) 868, 1192, 1390
AcuI CTGAAG 1 cut(s) 834
AcyI GRCGYC 1 cut(s) 306
AfaI GTAC 3 cut(s) 277, 942, 1266
AfiI CCNNNNNNNGG 5 cut(s) 11, 89, 95, 905, 1229
AgsI TTSAA 2 cut(s) 548, 1349
AjnI CCWGG 2 cut(s) 1153, 1364
Alw21I GWGCWC 1 cut(s) 798
Alw26I GTCTC 2 cut(s) 93, 1350
AlwI GGATC 6 cut(s) 126, 131, 207, 416, 578, 722
AoxI GGCC 3 cut(s) 174, 400, 1401
ApoI RAATTY 3 cut(s) 868, 1192, 1390
ArsI GACNNNNNNTTYG 1 cut(s) 38
AspLEI GCGC 1 cut(s) 258
AspS9I GGNCC 1 cut(s) 174
AsuC2I CCSGG 2 cut(s) 12, 90
AsuHPI GGTGA 9 cut(s) 82, 140, 205, 761, 977, 1031, 1061, 1076, 1118
BaeGI GKGCMC 1 cut(s) 90
BanII GRGCYC 2 cut(s) 612, 798
BbsI GAAGAC 4 cut(s) 42, 233, 555, 623
Bbv12I GWGCWC 1 cut(s) 798
BccI CCATC 2 cut(s) 399, 646
BceAI ACGGC 2 cut(s) 309, 415
BcgI CGANNNNNNTGC 2 cut(s) 225, 259
BciT130I CCWGG 2 cut(s) 1155, 1366
BcnI CCSGG 2 cut(s) 12, 90
BcoDI GTCTC 2 cut(s) 93, 1350
BfaI CTAG 6 cut(s) 788, 833, 857, 905, 920, 1229
BfmI CTRYAG 3 cut(s) 373, 503, 825
Bme1390I CCNGG 4 cut(s) 12, 90, 1155, 1366
BmgT120I GGNCC 1 cut(s) 174
BmiI GGNNCC 1 cut(s) 609
BmrFI CCNGG 4 cut(s) 12, 90, 1155, 1366
BmsI GCATC 3 cut(s) 69, 925, 1249
BpiI GAAGAC 4 cut(s) 42, 233, 555, 623
BpmI CTGGAG 2 cut(s) 291, 1265
BpuEI CTTGAG 4 cut(s) 80, 205, 428, 1266
BpuMI CCSGG 2 cut(s) 12, 90
BsaBI GATNNNNATC 1 cut(s) 324
BsaHI GRCGYC 1 cut(s) 306
BsaJI CCNNGG 3 cut(s) 30, 140, 1122
BsaWI WCCGGW 1 cut(s) 730
BsaXI ACNNNNNCTCC 2 cut(s) 618, 648
Bsc4I CCNNNNNNNGG 5 cut(s) 11, 89, 95, 905, 1229
Bse1I ACTGG 4 cut(s) 83, 274, 1076, 1295
Bse8I GATNNNNATC 1 cut(s) 324
BseBI CCWGG 2 cut(s) 1155, 1366
BseDI CCNNGG 3 cut(s) 30, 140, 1122
BseGI GGATG 1 cut(s) 84
BseJI GATNNNNATC 1 cut(s) 324
BseLI CCNNNNNNNGG 5 cut(s) 11, 89, 95, 905, 1229
BseMII CTCAG 1 cut(s) 1029
BseNI ACTGG 4 cut(s) 83, 274, 1076, 1295
BseRI GAGGAG 5 cut(s) 35, 202, 551, 617, 620
BseSI GKGCMC 1 cut(s) 90
BseX3I CGGCCG 1 cut(s) 400
BsgI GTGCAG 1 cut(s) 1025
Bsh1236I CGCG 1 cut(s) 247
Bsh1285I CGRYCG 1 cut(s) 403
BshFI GGCC 3 cut(s) 176, 402, 1403
BsiEI CGRYCG 1 cut(s) 403
BsiHKAI GWGCWC 1 cut(s) 798
BsiSI CCGG 3 cut(s) 11, 90, 731
BslFI GGGAC 2 cut(s) 27, 280
BslI CCNNNNNNNGG 5 cut(s) 11, 89, 95, 905, 1229
BsmAI GTCTC 2 cut(s) 93, 1350
BsmBI CGTCTC 1 cut(s) 93
BsmFI GGGAC 2 cut(s) 27, 280
BsmI GAATGC 2 cut(s) 975, 1147
BsnI GGCC 3 cut(s) 176, 402, 1403
Bsp1286I GDGCHC 3 cut(s) 90, 612, 798
Bsp143I GATC 7 cut(s) 118, 136, 199, 408, 496, 583, 727
Bsp19I CCATGG 3 cut(s) 30, 140, 1122
BspACI CCGC 1 cut(s) 1138
BspANI GGCC 3 cut(s) 176, 402, 1403
BspCNI CTCAG 1 cut(s) 1030
BspFNI CGCG 1 cut(s) 247
BspLI GGNNCC 1 cut(s) 609
BspMAI CTGCAG 1 cut(s) 507
BspPI GGATC 6 cut(s) 126, 131, 207, 416, 578, 722
BspQI GCTCTTC 2 cut(s) 786, 1086
BsrBI CCGCTC 1 cut(s) 1138
BsrI ACTGG 4 cut(s) 83, 274, 1076, 1295
BssECI CCNNGG 3 cut(s) 30, 140, 1122
BssMI GATC 7 cut(s) 118, 136, 199, 408, 496, 583, 727
BssNAI GTATAC 1 cut(s) 1035
BssNI GRCGYC 1 cut(s) 306
BssT1I CCWWGG 3 cut(s) 30, 140, 1122
Bst1107I GTATAC 1 cut(s) 1035
Bst2UI CCWGG 2 cut(s) 1155, 1366
Bst4CI ACNGT 4 cut(s) 128, 262, 346, 1003
Bst6I CTCTTC 6 cut(s) 12, 509, 528, 786, 1086, 1122
BstACI GRCGYC 1 cut(s) 306
BstAPI GCANNNNNTGC 1 cut(s) 667
BstC8I GCNNGC 4 cut(s) 245, 298, 675, 1215
BstDEI CTNAG 2 cut(s) 485, 1038
BstDSI CCRYGG 3 cut(s) 30, 140, 1122
BstEII GGTNACC 1 cut(s) 128
BstENI CCTNNNNNAGG 2 cut(s) 903, 1227
BstF5I GGATG 1 cut(s) 84
BstFNI CGCG 1 cut(s) 247
BstHHI GCGC 1 cut(s) 258
BstKTI GATC 7 cut(s) 121, 139, 202, 411, 499, 586, 730
BstMAI GTCTC 2 cut(s) 93, 1350
BstMBI GATC 7 cut(s) 118, 136, 199, 408, 496, 583, 727
BstMCI CGRYCG 1 cut(s) 403
BstMWI GCNNNNNNNGC 3 cut(s) 253, 667, 836
BstNI CCWGG 2 cut(s) 1155, 1366
BstPI GGTNACC 1 cut(s) 128
BstSCI CCNGG 4 cut(s) 10, 88, 1153, 1364
BstSFI CTRYAG 3 cut(s) 373, 503, 825
BstSLI GKGCMC 1 cut(s) 90
BstUI CGCG 1 cut(s) 247
BstV2I GAAGAC 4 cut(s) 42, 233, 555, 623
BstX2I RGATCY 3 cut(s) 118, 136, 199
BstXI CCANNNNNNTGG 1 cut(s) 1351
BstYI RGATCY 3 cut(s) 118, 136, 199
BstZ17I GTATAC 1 cut(s) 1035
BstZI CGGCCG 1 cut(s) 400
BsuRI GGCC 3 cut(s) 176, 402, 1403
BtgI CCRYGG 3 cut(s) 30, 140, 1122
BtsCI GGATG 1 cut(s) 84
BtsIMutI CAGTG 1 cut(s) 90
Cac8I GCNNGC 4 cut(s) 245, 298, 675, 1215
CfoI GCGC 1 cut(s) 258
Cfr13I GGNCC 1 cut(s) 174
CseI GACGC 1 cut(s) 1061
Csp6I GTAC 3 cut(s) 276, 941, 1265
CviAII CATG 7 cut(s) 31, 49, 141, 395, 412, 1061, 1123
CviQI GTAC 3 cut(s) 276, 941, 1265
DdeI CTNAG 2 cut(s) 485, 1038
DpnI GATC 7 cut(s) 120, 138, 201, 410, 498, 585, 729
DpnII GATC 7 cut(s) 118, 136, 199, 408, 496, 583, 727
DraI TTTAAA 1 cut(s) 357
EaeI YGGCCR 1 cut(s) 400
EagI CGGCCG 1 cut(s) 400
Eam1104I CTCTTC 6 cut(s) 12, 509, 528, 786, 1086, 1122
EarI CTCTTC 6 cut(s) 12, 509, 528, 786, 1086, 1122
Ecl136II GAGCTC 1 cut(s) 796
EclXI CGGCCG 1 cut(s) 400
Eco130I CCWWGG 3 cut(s) 30, 140, 1122
Eco24I GRGCYC 2 cut(s) 612, 798
Eco32I GATATC 1 cut(s) 966
Eco52I CGGCCG 1 cut(s) 400
Eco53kI GAGCTC 1 cut(s) 796
Eco57I CTGAAG 1 cut(s) 834
Eco91I GGTNACC 1 cut(s) 128
EcoICRI GAGCTC 1 cut(s) 796
EcoNI CCTNNNNNAGG 2 cut(s) 903, 1227
EcoO65I GGTNACC 1 cut(s) 128
EcoRI GAATTC 2 cut(s) 868, 1192
EcoRII CCWGG 2 cut(s) 1153, 1364
EcoRV GATATC 1 cut(s) 966
EcoT14I CCWWGG 3 cut(s) 30, 140, 1122
EcoT22I ATGCAT 1 cut(s) 1062
EcoT38I GRGCYC 2 cut(s) 612, 798
ErhI CCWWGG 3 cut(s) 30, 140, 1122
Esp3I CGTCTC 1 cut(s) 93
FaeI CATG 7 cut(s) 34, 52, 144, 398, 415, 1064, 1126
FalI AAGNNNNNCTT 2 cut(s) 293, 325
FaqI GGGAC 2 cut(s) 27, 280
FatI CATG 7 cut(s) 30, 48, 140, 394, 411, 1060, 1122
FauNDI CATATG 1 cut(s) 1077
FblI GTMKAC 1 cut(s) 1034
FokI GGATG 1 cut(s) 91
FriOI GRGCYC 2 cut(s) 612, 798
FspBI CTAG 6 cut(s) 788, 833, 857, 905, 920, 1229
GlaI GCGC 1 cut(s) 257
GsuI CTGGAG 2 cut(s) 291, 1265
HaeIII GGCC 3 cut(s) 176, 402, 1403
HapII CCGG 3 cut(s) 11, 90, 731
HgaI GACGC 1 cut(s) 1061
HhaI GCGC 1 cut(s) 258
Hin1I GRCGYC 1 cut(s) 306
Hin1II CATG 7 cut(s) 34, 52, 144, 398, 415, 1064, 1126
Hin6I GCGC 1 cut(s) 256
HinP1I GCGC 1 cut(s) 256
HincII GTYRAC 1 cut(s) 577
HindII GTYRAC 1 cut(s) 577
HinfI GANTC 5 cut(s) 325, 541, 590, 770, 809
HpaI GTTAAC 1 cut(s) 577
HpaII CCGG 3 cut(s) 11, 90, 731
HphI GGTGA 9 cut(s) 82, 140, 205, 761, 977, 1031, 1061, 1076, 1118
Hpy166II GTNNAC 5 cut(s) 73, 457, 482, 577, 1035
Hpy188I TCNGA 2 cut(s) 775, 814
Hpy188III TCNNGA 9 cut(s) 265, 317, 445, 545, 587, 788, 920, 1244, 1283
Hpy8I GTNNAC 5 cut(s) 73, 457, 482, 577, 1035
Hpy99I CGWCG 5 cut(s) 98, 569, 1388, 1402, 1419
HpyAV CCTTC 2 cut(s) 61, 690
HpyCH4III ACNGT 4 cut(s) 128, 262, 346, 1003
HpyCH4IV ACGT 3 cut(s) 102, 306, 628
HpyF10VI GCNNNNNNNGC 3 cut(s) 253, 667, 836
HpyF3I CTNAG 2 cut(s) 485, 1038
HpySE526I ACGT 3 cut(s) 102, 306, 628
Hsp92I GRCGYC 1 cut(s) 306
Hsp92II CATG 7 cut(s) 34, 52, 144, 398, 415, 1064, 1126
HspAI GCGC 1 cut(s) 256
KspAI GTTAAC 1 cut(s) 577
Kzo9I GATC 7 cut(s) 118, 136, 199, 408, 496, 583, 727
LguI GCTCTTC 2 cut(s) 786, 1086
LmnI GCTCC 2 cut(s) 607, 1246
LweI GCATC 3 cut(s) 69, 925, 1249
MaeI CTAG 6 cut(s) 788, 833, 857, 905, 920, 1229
MaeII ACGT 3 cut(s) 102, 306, 628
MaeIII GTNAC 3 cut(s) 128, 435, 1049
MalI GATC 7 cut(s) 120, 138, 201, 410, 498, 585, 729
MbiI CCGCTC 1 cut(s) 1138
MboI GATC 7 cut(s) 118, 136, 199, 408, 496, 583, 727
MfeI CAATTG 2 cut(s) 884, 1208
MflI RGATCY 3 cut(s) 118, 136, 199
MhlI GDGCHC 3 cut(s) 90, 612, 798
MluCI AATT 7 cut(s) 868, 884, 1192, 1208, 1253, 1390, 1423
MlyI GAGTC 1 cut(s) 550
MmeI TCCRAC 1 cut(s) 96
Mph1103I ATGCAT 1 cut(s) 1062
MseI TTAA 3 cut(s) 356, 576, 1426
MslI CAYNNNNRTG 2 cut(s) 990, 1349
MspI CCGG 3 cut(s) 11, 90, 731
MspR9I CCNGG 4 cut(s) 12, 90, 1155, 1366
MunI CAATTG 2 cut(s) 884, 1208
Mva1269I GAATGC 2 cut(s) 975, 1147
MvaI CCWGG 2 cut(s) 1155, 1366
MvnI CGCG 1 cut(s) 247
MwoI GCNNNNNNNGC 3 cut(s) 253, 667, 836
NciI CCSGG 2 cut(s) 12, 90
NcoI CCATGG 3 cut(s) 30, 140, 1122
NdeI CATATG 1 cut(s) 1077
NdeII GATC 7 cut(s) 118, 136, 199, 408, 496, 583, 727
NlaIII CATG 7 cut(s) 34, 52, 144, 398, 415, 1064, 1126
NlaIV GGNNCC 1 cut(s) 609
NmuCI GTSAC 3 cut(s) 128, 435, 1049
NsiI ATGCAT 1 cut(s) 1062
PciSI GCTCTTC 2 cut(s) 786, 1086
PcsI WCGNNNNNNNCGW 2 cut(s) 108, 564
PctI GAATGC 2 cut(s) 975, 1147
PfeI GAWTC 4 cut(s) 325, 590, 770, 809
PflFI GACNNNGTC 2 cut(s) 554, 627
PfoI TCCNGGA 1 cut(s) 10
PleI GAGTC 1 cut(s) 549
PpsI GAGTC 1 cut(s) 549
Psp124BI GAGCTC 1 cut(s) 798
Psp6I CCWGG 2 cut(s) 1153, 1364
PspEI GGTNACC 1 cut(s) 128
PspGI CCWGG 2 cut(s) 1153, 1364
PspN4I GGNNCC 1 cut(s) 609
PspPI GGNCC 1 cut(s) 174
PstI CTGCAG 1 cut(s) 507
PsuI RGATCY 3 cut(s) 118, 136, 199
PsyI GACNNNGTC 2 cut(s) 554, 627
RsaI GTAC 3 cut(s) 277, 942, 1266
RsaNI GTAC 3 cut(s) 276, 941, 1265
RseI CAYNNNNRTG 2 cut(s) 990, 1349
SacI GAGCTC 1 cut(s) 798
SapI GCTCTTC 2 cut(s) 786, 1086
SaqAI TTAA 3 cut(s) 356, 576, 1426
Sau3AI GATC 7 cut(s) 118, 136, 199, 408, 496, 583, 727
Sau96I GGNCC 1 cut(s) 174
SchI GAGTC 1 cut(s) 550
ScrFI CCNGG 4 cut(s) 12, 90, 1155, 1366
SduI GDGCHC 3 cut(s) 90, 612, 798
SfaNI GCATC 3 cut(s) 69, 925, 1249
SfcI CTRYAG 3 cut(s) 373, 503, 825
SmiMI CAYNNNNRTG 2 cut(s) 990, 1349
SmlI CTYRAG 4 cut(s) 59, 184, 443, 1281
SmoI CTYRAG 4 cut(s) 59, 184, 443, 1281
Sse9I AATT 7 cut(s) 868, 884, 1192, 1208, 1253, 1390, 1423
SsiI CCGC 1 cut(s) 1138
SspMI CTAG 6 cut(s) 788, 833, 857, 905, 920, 1229
SstI GAGCTC 1 cut(s) 798
StyD4I CCNGG 4 cut(s) 10, 88, 1153, 1364
StyI CCWWGG 3 cut(s) 30, 140, 1122
TaaI ACNGT 4 cut(s) 128, 262, 346, 1003
TaiI ACGT 3 cut(s) 105, 309, 631
TaqI TCGA 2 cut(s) 318, 558
TasI AATT 7 cut(s) 868, 884, 1192, 1208, 1253, 1390, 1423
TfiI GAWTC 4 cut(s) 325, 590, 770, 809
Tru1I TTAA 3 cut(s) 356, 576, 1426
Tru9I TTAA 3 cut(s) 356, 576, 1426
TscAI CASTG 1 cut(s) 90
TseFI GTSAC 3 cut(s) 128, 435, 1049
Tsp45I GTSAC 3 cut(s) 128, 435, 1049
TspDTI ATGAA 8 cut(s) 419, 666, 672, 822, 1008, 1115, 1179, 1337
TspGWI ACGGA 1 cut(s) 111
TspRI CASTG 1 cut(s) 90
Tth111I GACNNNGTC 2 cut(s) 554, 627
XagI CCTNNNNNAGG 2 cut(s) 903, 1227
XapI RAATTY 3 cut(s) 868, 1192, 1390
XbaI TCTAGA 2 cut(s) 787, 919
XcmI CCANNNNNNNNNTGG 1 cut(s) 147
XmiI GTMKAC 1 cut(s) 1034
XspI CTAG 6 cut(s) 788, 833, 857, 905, 920, 1229
ZraI GACGTC 1 cut(s) 307
Zsp2I ATGCAT 1 cut(s) 1062
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.