Rh6DG174700
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000076
Physical Location & Seq
Reverse (-)
30710307 .. 30712024
1718 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG174700.1

Sequence Viewer

Length: 1302 bp
ATGCAGAAAGAATTTCCGATGGAGGAGAGCAGAGGCAATCAACTTCTTGGCCAGAGGTTCTGCCCCATGGAAGATGAACTAGTTCTCTTCTACCTCAAGCCCATGTTGAGCGAACAGATTGTGCCCGGCAAAAACCGCGTGGTGTTCGACTGCGACCTCTACGATCACCAAGAACCTTGGGAGATATGGGAGGCCTTCAAGACCAAAAGACCACACGACTTGAGGCTCAACAAGGACATTTACTTCTTCACCCAACACAAGAAGATGAGTTCCACAGCCAAGCGCGTACGCCGGAATGTTGGAAGTGGCACCTGGAAGGGCGACGACTCCGACAAGCCAGTACGATCTGTTGAAACGGGTCGTGTTGTTGGCTTGAACAAAAGATATACTTACAAGAACGATGACTCGGTTCACAACGGCTGTTGGATCTTGTATGAGTTCTACCTTGATCAATCACTCAGAGACAATAAACAAAAGCTGGAAGACTATGTTCTTTGTCTACTACGAAAGAATGGTGAACCCAAAACCAAGATCAAAAAGAAAAGAAAGCAACGTGAAGAGGAAGAGGTTCTTGAAAACAATTATGCCTTTGATGATGGAGAAAAATCGAAAAGGGAGCAAGAAGAGTTGCTTGAGCCACAAGCGAAGCGGCAACGAACGGTGTCATCCATTGGTAATGCACCACTAACAATGCCATCAGAAGATGATGCTGCATTCGCAGCTGAACTAGAAGAGTCATTGGAATGCTTTGAAGATGATAATGCACCCTCAGAAGCTCGAGCAATTGGCTTTGAAGGTGGGGAGAATGGTGGACTCCAAAAATTAGCAGCCGAGGTGCAATCAAGGCCTTCATTTGTAGACGATCATGGAATATTTAATCCGCTGCCGGAGGAAGACTTTCTCTTGGCGGAAATGTTAGAAGAAATGGGTATGGTGGACATGGAAGAACTAGTTCTTATTAATGGTAAGAGTATTAATATAGATGTGGCAGCTGAAGAAAACGTGAAAAACAGCACCCTTCTCTCTGCTCCCACATCATCCATGTCTGCGGCCTATGATGGTTGCAATGATATGCCATATTTATCCTCGAAAAATGGTTGCATTGATCGATCTGGAAGCAATAATGTTTGTGGAGGATCGATTGGCTTTCAGGATGGTGCGTACTGGGTTGAGTCTTTGGTGGAGGTCCCAAGTACTGTTGAGCAACAAAAGATAGCTGATGAAGATTGTTCAGATTGGTTGGAGTCAATCAATTTTAGTCCTGAGGAGAACAACTTCCTCTTCAGTGAAATGCAATGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

433

Amino Acids

49.42

Weight (kDa)

4.64

Isoelectric Point (pI)

60.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 17 - 148 7.3e-22 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 308
AccI GTMKAC 2 cut(s) 499, 858
AccII CGCG 2 cut(s) 138, 285
AciI CCGC 5 cut(s) 136, 649, 881, 908, 1049
AclWI GGATC 2 cut(s) 434, 1144
AcoI YGGCCR 1 cut(s) 49
AcsI RAATTY 1 cut(s) 11
AcuI CTGAAG 2 cut(s) 1014, 1267
AfaI GTAC 4 cut(s) 288, 342, 1163, 1195
AgsI TTSAA 6 cut(s) 199, 353, 376, 575, 752, 794
AhlI ACTAGT 2 cut(s) 79, 949
AjnI CCWGG 1 cut(s) 311
AluBI AGCT 5 cut(s) 478, 722, 776, 992, 1217
AluI AGCT 5 cut(s) 478, 722, 776, 992, 1217
Alw26I GTCTC 1 cut(s) 456
AlwI GGATC 2 cut(s) 434, 1144
Ama87I CYCGRG 1 cut(s) 777
AoxI GGCC 4 cut(s) 49, 192, 845, 1050
ApeKI GCWGC 5 cut(s) 710, 719, 827, 883, 989
ApoI RAATTY 1 cut(s) 11
AseI ATTAAT 2 cut(s) 960, 975
Asp700I GAANNNNTTC 5 cut(s) 81, 567, 897, 951, 1274
AspLEI GCGC 1 cut(s) 285
AspS9I GGNCC 1 cut(s) 1186
AsuC2I CCSGG 1 cut(s) 126
AsuHPI GGTGA 3 cut(s) 158, 241, 527
AvaI CYCGRG 1 cut(s) 777
AvaII GGWCC 1 cut(s) 1186
AxyI CCTNAGG 1 cut(s) 1263
BaeGI GKGCMC 1 cut(s) 126
BalI TGGCCA 1 cut(s) 51
BanI GGYRCC 1 cut(s) 308
BbsI GAAGAC 2 cut(s) 489, 900
BbvI GCAGC 5 cut(s) 697, 731, 839, 870, 1001
BccI CCATC 5 cut(s) 13, 590, 703, 1052, 1148
BceAI ACGGC 1 cut(s) 433
BciT130I CCWGG 1 cut(s) 313
BclI TGATCA 1 cut(s) 448
BcnI CCSGG 1 cut(s) 126
BcoDI GTCTC 1 cut(s) 456
BcuI ACTAGT 2 cut(s) 79, 949
BfaI CTAG 3 cut(s) 80, 728, 950
BisI GCNGC 7 cut(s) 650, 711, 720, 828, 884, 990, 1050
BlsI GCNGC 7 cut(s) 651, 712, 721, 829, 885, 991, 1051
BmcAI AGTACT 1 cut(s) 1195
Bme1390I CCNGG 2 cut(s) 126, 313
Bme18I GGWCC 1 cut(s) 1186
BmeT110I CYCGRG 1 cut(s) 777
BmgT120I GGNCC 1 cut(s) 1186
BmiI GGNNCC 2 cut(s) 310, 1188
BmrFI CCNGG 2 cut(s) 126, 313
BmrI ACTGGG 1 cut(s) 1174
BmsI GCATC 1 cut(s) 697
BmuI ACTGGG 1 cut(s) 1174
BpiI GAAGAC 2 cut(s) 489, 900
BpuEI CTTGAG 3 cut(s) 80, 241, 653
BpuMI CCSGG 1 cut(s) 126
Bsa29I ATCGAT 2 cut(s) 1108, 1139
BsaJI CCNNGG 3 cut(s) 66, 176, 831
Bse1I ACTGG 2 cut(s) 338, 1169
Bse21I CCTNAGG 1 cut(s) 1263
Bse3DI GCAATG 2 cut(s) 1072, 1301
BseBI CCWGG 1 cut(s) 313
BseCI ATCGAT 2 cut(s) 1108, 1139
BseDI CCNNGG 3 cut(s) 66, 176, 831
BseGI GGATG 3 cut(s) 665, 1037, 1159
BseMI GCAATG 2 cut(s) 1072, 1301
BseMII CTCAG 3 cut(s) 472, 783, 1254
BseNI ACTGG 2 cut(s) 338, 1169
BseRI GAGGAG 2 cut(s) 38, 1280
BseSI GKGCMC 1 cut(s) 126
BseXI GCAGC 5 cut(s) 697, 731, 839, 870, 1001
Bsh1236I CGCG 2 cut(s) 138, 285
BshFI GGCC 4 cut(s) 51, 194, 847, 1052
BshNI GGYRCC 1 cut(s) 308
BshVI ATCGAT 2 cut(s) 1108, 1139
BsiHKCI CYCGRG 1 cut(s) 777
BsiSI CCGG 3 cut(s) 126, 292, 887
BsiWI CGTACG 1 cut(s) 286
BslFI GGGAC 1 cut(s) 1172
BsmAI GTCTC 1 cut(s) 456
BsmFI GGGAC 1 cut(s) 1172
BsmI GAATGC 2 cut(s) 713, 749
BsnI GGCC 4 cut(s) 51, 194, 847, 1052
BsoBI CYCGRG 1 cut(s) 777
Bsp1286I GDGCHC 1 cut(s) 126
Bsp143I GATC 9 cut(s) 163, 344, 426, 448, 531, 862, 1105, 1109, 1136
Bsp19I CCATGG 1 cut(s) 66
BspACI CCGC 5 cut(s) 136, 649, 881, 908, 1049
BspANI GGCC 4 cut(s) 51, 194, 847, 1052
BspCNI CTCAG 3 cut(s) 471, 782, 1255
BspDI ATCGAT 2 cut(s) 1108, 1139
BspFNI CGCG 2 cut(s) 138, 285
BspLI GGNNCC 2 cut(s) 310, 1188
BspPI GGATC 2 cut(s) 434, 1144
BspT107I GGYRCC 1 cut(s) 308
BsrDI GCAATG 2 cut(s) 1072, 1301
BsrI ACTGG 2 cut(s) 338, 1169
BssECI CCNNGG 3 cut(s) 66, 176, 831
BssMI GATC 9 cut(s) 163, 344, 426, 448, 531, 862, 1105, 1109, 1136
BssT1I CCWWGG 2 cut(s) 66, 176
Bst2UI CCWGG 1 cut(s) 313
Bst4CI ACNGT 2 cut(s) 661, 1198
Bst6I CTCTTC 6 cut(s) 92, 552, 558, 618, 726, 1286
BstDEI CTNAG 3 cut(s) 458, 769, 1263
BstDSI CCRYGG 1 cut(s) 66
BstF5I GGATG 3 cut(s) 665, 1037, 1159
BstFNI CGCG 2 cut(s) 138, 285
BstHHI GCGC 1 cut(s) 285
BstKTI GATC 9 cut(s) 166, 347, 429, 451, 534, 865, 1108, 1112, 1139
BstMAI GTCTC 1 cut(s) 456
BstMBI GATC 9 cut(s) 163, 344, 426, 448, 531, 862, 1105, 1109, 1136
BstMWI GCNNNNNNNGC 4 cut(s) 135, 716, 719, 844
BstNI CCWGG 1 cut(s) 313
BstSCI CCNGG 2 cut(s) 124, 311
BstSLI GKGCMC 1 cut(s) 126
BstUI CGCG 2 cut(s) 138, 285
BstV1I GCAGC 5 cut(s) 697, 731, 839, 870, 1001
BstV2I GAAGAC 2 cut(s) 489, 900
BstX2I RGATCY 1 cut(s) 426
BstYI RGATCY 1 cut(s) 426
Bsu15I ATCGAT 2 cut(s) 1108, 1139
Bsu36I CCTNAGG 1 cut(s) 1263
BsuRI GGCC 4 cut(s) 51, 194, 847, 1052
BsuTUI ATCGAT 2 cut(s) 1108, 1139
BtgI CCRYGG 1 cut(s) 66
BtsCI GGATG 3 cut(s) 665, 1037, 1159
BtsIMutI CAGTG 1 cut(s) 1291
CfoI GCGC 1 cut(s) 285
Cfr13I GGNCC 1 cut(s) 1186
ClaI ATCGAT 2 cut(s) 1108, 1139
Csp6I GTAC 4 cut(s) 287, 341, 1162, 1194
CspCI CAANNNNNGTGG 2 cut(s) 201, 236
CviAII CATG 5 cut(s) 67, 103, 866, 940, 1042
CviQI GTAC 4 cut(s) 287, 341, 1162, 1194
DdeI CTNAG 3 cut(s) 458, 769, 1263
DpnI GATC 9 cut(s) 165, 346, 428, 450, 533, 864, 1107, 1111, 1138
DpnII GATC 9 cut(s) 163, 344, 426, 448, 531, 862, 1105, 1109, 1136
EaeI YGGCCR 1 cut(s) 49
Eam1104I CTCTTC 6 cut(s) 92, 552, 558, 618, 726, 1286
EarI CTCTTC 6 cut(s) 92, 552, 558, 618, 726, 1286
EciI GGCGGA 1 cut(s) 923
Eco130I CCWWGG 2 cut(s) 66, 176
Eco147I AGGCCT 2 cut(s) 194, 847
Eco47I GGWCC 1 cut(s) 1186
Eco57I CTGAAG 2 cut(s) 1014, 1267
Eco81I CCTNAGG 1 cut(s) 1263
Eco88I CYCGRG 1 cut(s) 777
EcoO109I RGGNCCY 1 cut(s) 1186
EcoRII CCWGG 1 cut(s) 311
EcoT14I CCWWGG 2 cut(s) 66, 176
ErhI CCWWGG 2 cut(s) 66, 176
FaeI CATG 5 cut(s) 70, 106, 869, 943, 1045
FalI AAGNNNNNCTT 6 cut(s) 373, 405, 555, 587, 615, 647
FaqI GGGAC 1 cut(s) 1172
FatI CATG 5 cut(s) 66, 102, 865, 939, 1041
FbaI TGATCA 1 cut(s) 448
FblI GTMKAC 2 cut(s) 499, 858
Fnu4HI GCNGC 7 cut(s) 650, 711, 720, 828, 884, 990, 1050
FokI GGATG 3 cut(s) 652, 1024, 1166
Fsp4HI GCNGC 7 cut(s) 650, 711, 720, 828, 884, 990, 1050
FspBI CTAG 3 cut(s) 80, 728, 950
GlaI GCGC 1 cut(s) 284
GluI GCNGC 7 cut(s) 650, 711, 720, 828, 884, 990, 1050
HaeIII GGCC 4 cut(s) 51, 194, 847, 1052
HapII CCGG 3 cut(s) 126, 292, 887
HhaI GCGC 1 cut(s) 285
Hin1II CATG 5 cut(s) 70, 106, 869, 943, 1045
Hin6I GCGC 1 cut(s) 283
HinP1I GCGC 1 cut(s) 283
HinfI GANTC 6 cut(s) 326, 404, 734, 813, 1172, 1244
HpaII CCGG 3 cut(s) 126, 292, 887
HphI GGTGA 3 cut(s) 158, 241, 527
Hpy166II GTNNAC 6 cut(s) 412, 500, 518, 812, 859, 937
Hpy188I TCNGA 6 cut(s) 18, 331, 461, 700, 772, 1234
Hpy188III TCNNGA 5 cut(s) 199, 572, 1113, 1151, 1262
Hpy8I GTNNAC 6 cut(s) 412, 500, 518, 812, 859, 937
Hpy99I CGWCG 1 cut(s) 326
HpyAV CCTTC 5 cut(s) 205, 310, 788, 858, 1028
HpyCH4III ACNGT 2 cut(s) 661, 1198
HpyCH4IV ACGT 2 cut(s) 553, 1002
HpyCH4V TGCA 8 cut(s) 4, 680, 713, 764, 838, 1065, 1101, 1294
HpyF10VI GCNNNNNNNGC 4 cut(s) 135, 716, 719, 844
HpyF3I CTNAG 3 cut(s) 458, 769, 1263
HpySE526I ACGT 2 cut(s) 553, 1002
Hsp92II CATG 5 cut(s) 70, 106, 869, 943, 1045
HspAI GCGC 1 cut(s) 283
Ksp22I TGATCA 1 cut(s) 448
Kzo9I GATC 9 cut(s) 163, 344, 426, 448, 531, 862, 1105, 1109, 1136
LmnI GCTCC 2 cut(s) 616, 1033
Lsp1109I GCAGC 5 cut(s) 697, 731, 839, 870, 1001
LweI GCATC 1 cut(s) 697
MaeI CTAG 3 cut(s) 80, 728, 950
MaeII ACGT 2 cut(s) 553, 1002
MalI GATC 9 cut(s) 165, 346, 428, 450, 533, 864, 1107, 1111, 1138
MboI GATC 9 cut(s) 163, 344, 426, 448, 531, 862, 1105, 1109, 1136
MfeI CAATTG 1 cut(s) 783
MflI RGATCY 1 cut(s) 426
MhlI GDGCHC 1 cut(s) 126
MlsI TGGCCA 1 cut(s) 51
MluCI AATT 5 cut(s) 11, 580, 783, 821, 1252
MluNI TGGCCA 1 cut(s) 51
MlyI GAGTC 6 cut(s) 320, 398, 743, 807, 1181, 1253
MmeI TCCRAC 4 cut(s) 280, 354, 404, 1221
Mox20I TGGCCA 1 cut(s) 51
MroXI GAANNNNTTC 5 cut(s) 81, 567, 897, 951, 1274
MscI TGGCCA 1 cut(s) 51
MseI TTAA 3 cut(s) 876, 960, 975
MslI CAYNNNNRTG 1 cut(s) 742
Msp20I TGGCCA 1 cut(s) 51
MspA1I CMGCKG 3 cut(s) 722, 883, 992
MspI CCGG 3 cut(s) 126, 292, 887
MspR9I CCNGG 2 cut(s) 126, 313
MunI CAATTG 1 cut(s) 783
Mva1269I GAATGC 2 cut(s) 713, 749
MvaI CCWGG 1 cut(s) 313
MvnI CGCG 2 cut(s) 138, 285
MwoI GCNNNNNNNGC 4 cut(s) 135, 716, 719, 844
NciI CCSGG 1 cut(s) 126
NcoI CCATGG 1 cut(s) 66
NdeII GATC 9 cut(s) 163, 344, 426, 448, 531, 862, 1105, 1109, 1136
NlaIII CATG 5 cut(s) 70, 106, 869, 943, 1045
NlaIV GGNNCC 2 cut(s) 310, 1188
NmeAIII GCCGAG 1 cut(s) 856
PaeR7I CTCGAG 1 cut(s) 777
PceI AGGCCT 2 cut(s) 194, 847
PctI GAATGC 2 cut(s) 713, 749
PdmI GAANNNNTTC 5 cut(s) 81, 567, 897, 951, 1274
Pfl23II CGTACG 1 cut(s) 286
PkrI GCNGC 7 cut(s) 651, 712, 721, 829, 885, 991, 1051
PleI GAGTC 6 cut(s) 320, 398, 742, 807, 1180, 1252
PpsI GAGTC 6 cut(s) 320, 398, 742, 807, 1180, 1252
PpuMI RGGWCCY 1 cut(s) 1186
PshBI ATTAAT 2 cut(s) 960, 975
Psp5II RGGWCCY 1 cut(s) 1186
Psp6I CCWGG 1 cut(s) 311
PspGI CCWGG 1 cut(s) 311
PspLI CGTACG 1 cut(s) 286
PspN4I GGNNCC 2 cut(s) 310, 1188
PspPI GGNCC 1 cut(s) 1186
PspPPI RGGWCCY 1 cut(s) 1186
PspXI VCTCGAGB 1 cut(s) 777
PsuI RGATCY 1 cut(s) 426
PvuII CAGCTG 2 cut(s) 722, 992
RsaI GTAC 4 cut(s) 288, 342, 1163, 1195
RsaNI GTAC 4 cut(s) 287, 341, 1162, 1194
RseI CAYNNNNRTG 1 cut(s) 742
SaqAI TTAA 3 cut(s) 876, 960, 975
SatI GCNGC 7 cut(s) 650, 711, 720, 828, 884, 990, 1050
Sau3AI GATC 9 cut(s) 163, 344, 426, 448, 531, 862, 1105, 1109, 1136
Sau96I GGNCC 1 cut(s) 1186
ScaI AGTACT 1 cut(s) 1195
SchI GAGTC 6 cut(s) 320, 398, 743, 807, 1181, 1253
ScrFI CCNGG 2 cut(s) 126, 313
SduI GDGCHC 1 cut(s) 126
SfaNI GCATC 1 cut(s) 697
Sfr274I CTCGAG 1 cut(s) 777
SinI GGWCC 1 cut(s) 1186
SlaI CTCGAG 1 cut(s) 777
SmiMI CAYNNNNRTG 1 cut(s) 742
SmlI CTYRAG 4 cut(s) 95, 220, 632, 777
SmoI CTYRAG 4 cut(s) 95, 220, 632, 777
SpeI ACTAGT 2 cut(s) 79, 949
Sse9I AATT 5 cut(s) 11, 580, 783, 821, 1252
SseBI AGGCCT 2 cut(s) 194, 847
SsiI CCGC 5 cut(s) 136, 649, 881, 908, 1049
SspI AATATT 1 cut(s) 873
SspMI CTAG 3 cut(s) 80, 728, 950
StuI AGGCCT 2 cut(s) 194, 847
StyD4I CCNGG 2 cut(s) 124, 311
StyI CCWWGG 2 cut(s) 66, 176
TaaI ACNGT 2 cut(s) 661, 1198
TaiI ACGT 2 cut(s) 556, 1005
TaqI TCGA 6 cut(s) 147, 608, 778, 1088, 1108, 1139
TasI AATT 5 cut(s) 11, 580, 783, 821, 1252
TatI WGTACW 1 cut(s) 1193
TauI GCSGC 2 cut(s) 652, 1052
Tru1I TTAA 3 cut(s) 876, 960, 975
Tru9I TTAA 3 cut(s) 876, 960, 975
TscAI CASTG 1 cut(s) 1291
TseI GCWGC 5 cut(s) 710, 719, 827, 883, 989
TspDTI ATGAA 3 cut(s) 90, 840, 1236
TspRI CASTG 1 cut(s) 1291
VpaK11BI GGWCC 1 cut(s) 1186
VspI ATTAAT 2 cut(s) 960, 975
XapI RAATTY 1 cut(s) 11
XhoI CTCGAG 1 cut(s) 777
XmiI GTMKAC 2 cut(s) 499, 858
XmnI GAANNNNTTC 5 cut(s) 81, 567, 897, 951, 1274
XspI CTAG 3 cut(s) 80, 728, 950
ZrmI AGTACT 1 cut(s) 1195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.