FvH4_5g25360
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000076
Physical Location & Seq
Reverse (-)
16888639 .. 16889907
1269 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g25360.t1

Sequence Viewer

Length: 1269 bp
ATGGAAGAGAGCAGAGGCACCCAACTTCCTGGCCAGAGGTTCTGCCCCATGGACGATGAACTAGTTCTCTTCTACCTCAAGCCCATGTTGAGTGGGGAGAACGTGCCTGGTAGAAATCGCTTGGTGTTCGACTGCGACCTTTACGGTAAGCAAGAACCTTGGGAGATATGGGAAGACTTCAAGACCAGACGACCACAGGACTTGAGGCTCAACAAGGACATCTATTTCTTCACTCAACACAAGACGATAAGTTCCACAGACAAACGCATACGCCGGAATGTTGGAAGTGGAACCTGGAGGAGCGACGACTTCGGCAAGCCAGTAGTATCTGTTGAGACTGGTCGTGTTGTTGGCTTGAAGAAAAGATTGACTTACAAAAACGTAGACTCGGTGCAGAACGGTTGTTGGATCTTGTACGAATTCTTTCTTGATCGGTCACTCAGAGACAAGAAACGAAAGCTGAAAGACTACGTTCTTTGTCTACTGCGAAAGAATGGTGAACCCAAAACCAAGATCGCAAAGAAGAGAAAGCAACGTGAAGAGGAAGATGAGGTTCTTGAAAATAATGATGCATGTGATGATACGGAAATCTCCAGGGGGGAGCAAGAAGAGTTGCTTGAAGCACAAGCCAAGAAACAACGAACTGCACCATCCATTGATAGTGCACCACCAACAATGCCATCACAAGATGATGATGCATTCGCAGCTGAACTACAAGAGACATTGGAATGCGTTGAAGATAACTATGCACCCTTATTAGAAGCTGAAGCAAGTAGCTTTCGAGGTGATGAGGAGAATTTTGGACAGCAACCATTAGCTGCCAATCATGGAATCTTTAATCAGCTGCAGGAGAAAGATCGCTTTGAGGAATTCCTAGATAGATTGAGTACTGAAGAAATGGAAGAAATGGCGGAAATACTTTTTTATGGTATGAGTAGTAATATAGACGTGGCTGAACAAAACGTGGTAAACAGCAGCACCCTTCATGATGCTCCCGTATCATCCATGTCTGCGGCATACGATTATGGCACTGCTATACCCTGTTTATCCTCGGAAAATGGTTGCATTGATACATCTGGTTGCAATGATGTTGGTGGAGGAGTGATGGGGTATGAGGATGGTGTGTGCATGCCTGAGCCTTTGGTGGAGGTCGCAGCTGATGAGCAACAAAAGACACCTGATGACGATCTTTCAGACTTGTTGGGGTCAATCGATTTTAGTCCTGAGGCAAACAACTTCTTTTGCAGCGAACCGCAATTGTGTTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

423

Amino Acids

47.77

Weight (kDa)

4.49

Isoelectric Point (pI)

59.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 10 - 141 3.4e-21 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000076)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53610 AT1G53620
fragaria_vesca FvH4_3g16890 FvH4_3g16900 FvH4_3g16910 FvH4_3g17012 FvH4_3g18170 FvH4_3g18460 FvH4_3g18930 FvH4_3g18940 FvH4_3g25560 FvH4_4g12410 FvH4_5g05980 FvH4_5g24860 FvH4_5g25360 FvH4_5g25510 FvH4_5g27470 FvH4_5g27620 FvH4_5g27760 FvH4_5g29460 FvH4_6g04191 FvH4_6g39190 FvH4_6g39200 FvH4_6g39580 FvH4_6g39600 FvH4_7g11470
malus_domestica MD00G1154700.v1.1 MD00G1154800.v1.1 MD00G1155000.v1.1 MD03G1255000.v1.1 MD03G1255100.v1.1 MD03G1255200.v1.1 MD03G1255300.v1.1 MD06G1030300.v1.1 MD11G1219300.v1.1 MD11G1264900.v1.1
prunus_persica Prupe.1G575600_v2.0.a1 Prupe.3G065000_v2.0.a1 Prupe.3G111400_v2.0.a1 Prupe.4G151300_v2.0.a1 Prupe.4G151900_v2.0.a1 Prupe.4G153700_v2.0.a1 Prupe.4G154000_v2.0.a1 Prupe.4G230600_v2.0.a1 Prupe.4G230900_v2.0.a1 Prupe.4G231000_v2.0.a1 Prupe.4G246100_v2.0.a1 Prupe.4G255500_v2.0.a1 Prupe.6G133600_v2.0.a1 Prupe.6G134000_v2.0.a1 Prupe.I005300_v2.0.a1
pyrus_communis pycom03g14030 pycom03g15340
rosa_chinensis RchiOBHm_Chr3g0452871 RchiOBHm_Chr5g0056721 RchiOBHm_Chr6g0271921 RchiOBHm_Chr7g0211251 RchiOBHm_Chr7g0231191
rosa_laevigata RLG00000000989 RLG00000001070 RLG00000001076 RLG00000001103 RLG00000001116 RLG00000001118 RLG00000001936 RLG00000001949 RLG00000002610 RLG00000002710 RLG00000003013 RLG00000013562 RLG00000013567 RLG00000018805 RLG00000020667 RLG00000020716 RLG00000020717 RLG00000025564 RLG00000028522 RLG00000030016 RLG00000033070 RLG00000033077 RLG00000033081 RLG00000033086 RLG00000033235 RLG00000033291 RLG00000033337 RLG00000033338 RLG00000033340 RLG00000033345 RLG00000033346 RLG00000033874 RLG00000033885 RLG00000034356 RLG00000034411 RLG00000034414
rosa_multiflora Rmu_co8273153.1_g000001 Rmu_co8288493.1_g000001 Rmu_co8293081.1_g000001 Rmu_co8429197.1_g000001 Rmu_sc0000055.1_g000007 Rmu_sc0000218.1_g000011 Rmu_sc0000533.1_g000061 Rmu_sc0000755.1_g000007 Rmu_sc0000758.1_g000005 Rmu_sc0000898.1_g000011 Rmu_sc0000898.1_g000025 Rmu_sc0001561.1_g000008 Rmu_sc0001571.1_g000004 Rmu_sc0002292.1_g000005 Rmu_sc0002292.1_g000006 Rmu_sc0002308.1_g000010 Rmu_sc0002449.1_g000010 Rmu_sc0002449.1_g000011 Rmu_sc0002536.1_g000004 Rmu_sc0002536.1_g000005 Rmu_sc0002536.1_g000015 Rmu_sc0003238.1_g000014 Rmu_sc0003545.1_g000015 Rmu_sc0003720.1_g000009 Rmu_sc0003878.1_g000040 Rmu_sc0003878.1_g000041 Rmu_sc0003878.1_g000047 Rmu_sc0003878.1_g000048 Rmu_sc0003972.1_g000001 Rmu_sc0004322.1_g000008 Rmu_sc0004379.1_g000014 Rmu_sc0005478.1_g000002 Rmu_sc0006240.1_g000008 Rmu_sc0006847.1_g000022 Rmu_sc0007753.1_g000022 Rmu_sc0007782.1_g000001 Rmu_sc0008328.1_g000002 Rmu_sc0008526.1_g000005 Rmu_sc0008835.1_g000013 Rmu_sc0014005.1_g000009 Rmu_sc0014478.1_g000004 Rmu_sc0015060.1_g000021 Rmu_sc0016364.1_g000001 Rmu_sc0016727.1_g000004 Rmu_sc0020600.1_g000008 Rmu_sc0022743.1_g000003 Rmu_sc0032116.1_g000002 Rmu_sc0033519.1_g000005 Rmu_sc0042823.1_g000001 Rmu_ssc0000134.1_g000011
rosa_roxburghii Rroxscaffold_1G00029360 Rroxscaffold_1G00034880 Rroxscaffold_1G00034930 Rroxscaffold_1G00034970 Rroxscaffold_1G00042100 Rroxscaffold_1G00049130 Rroxscaffold_1G00049660 Rroxscaffold_1G00051410 Rroxscaffold_2G00094840 Rroxscaffold_2G00094850 Rroxscaffold_2G00095300 Rroxscaffold_3G00224990 Rroxscaffold_3G00225050 Rroxscaffold_3G00225080 Rroxscaffold_3G00225360 Rroxscaffold_3G00235370 Rroxscaffold_3G00243820 Rroxscaffold_3G00243860 Rroxscaffold_3G00243920 Rroxscaffold_3G00244920 Rroxscaffold_4G00305330 Rroxscaffold_5G00373100 Rroxscaffold_6G00407840 Rroxscaffold_6G00422000 Rroxscaffold_6G00429880 Rroxscaffold_7G00186180
rosa_rugosa Rorug01G0120600 Rorug01G0127200 Rorug01G0128500 Rorug01G0206000 Rorug02G0251400 Rorug02G0420800 Rorug02G0436800 Rorug02G0441000 Rorug02G0643100 Rorug03G0339200 Rorug04G0168000 Rorug04G0168100 Rorug05G0104500 Rorug05G0105300 Rorug05G0105700 Rorug05G0105800 Rorug05G0118900 Rorug05G0175700 Rorug05G0228200 Rorug05G0229000 Rorug05G0229500 Rorug06G0064300 Rorug07G0124700 Rorug07G0156100 Rorug07G0156700 Rorug07G0158100 Rorug07G0219600 Rorug07G0273400 Rorug07G0291800 Rorug07G0294300 Rorug07G0297400 Rorug07G0297800
rosa_samantha Rh1BG189400 Rh1CG103600 Rh1CG142100 Rh1CG208100 Rh1DG209200 Rh2CG296600 Rh2CG301600 Rh2CG485100 Rh2CG489800 Rh2CG490000 Rh2DG333700 Rh2DG526600 Rh2DG526800 Rh3BG048500 Rh3CG047100 Rh3DG048100 Rh5AG198800 Rh5AG211300 Rh5AG213900 Rh5AG217700 Rh5AG221800 Rh5AG225800 Rh5AG262500 Rh5AG309600 Rh5BG210200 Rh5CG216300 Rh5CG217100 Rh5CG217500 Rh5CG233900 Rh5CG236800 Rh5CG239600 Rh5CG241200 Rh5CG244900 Rh5CG245100 Rh5CG254600 Rh5CG299700 Rh5CG343400 Rh5CG343600 Rh5CG406800 Rh5DG215100 Rh5DG215200 Rh5DG220900 Rh5DG222800 Rh5DG226600 Rh5DG226700 Rh5DG226800 Rh5DG231600 Rh5DG273600 Rh5DG327700 Rh5DG328300 Rh6BG185200 Rh6DG174700 Rh7AG257100 Rh7AG285100 Rh7AG293000 Rh7AG294700 Rh7AG296700 Rh7AG297200 Rh7AG298400 Rh7AG306700 Rh7AG362600 Rh7AG379100 Rh7AG449400 Rh7AG451800 Rh7AG453400 Rh7AG453500 Rh7AG459000 Rh7BG251000 Rh7BG275900 Rh7BG276100 Rh7BG276800 Rh7BG285400 Rh7BG353800 Rh7BG400900 Rh7BG418600 Rh7BG421100 Rh7BG424000 Rh7BG424300 Rh7BG424400 Rh7DG288700
rosa_wichuraiana Rw0G000390 Rw0G010750 Rw0G015930 Rw0G020680 Rw0G023760 Rw1G008930 Rw1G012360 Rw1G019040 Rw2G025060 Rw2G041400 Rw2G041420 Rw3G003610 Rw5G018050 Rw5G018130 Rw5G019340 Rw5G019550 Rw5G020700 Rw5G024510 Rw5G036060 Rw6G015630 Rw7G021960 Rw7G024340 Rw7G024900 Rw7G024940 Rw7G025030 Rw7G025280 Rw7G030800 Rw7G032090 Rw7G037610 Rw7G038010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 17
AccI GTMKAC 2 cut(s) 384, 481
AciI CCGC 3 cut(s) 911, 1013, 1253
AclWI GGATC 1 cut(s) 416
AcoI YGGCCR 1 cut(s) 31
AcsI RAATTY 3 cut(s) 419, 796, 869
AcuI CTGAAG 2 cut(s) 786, 912
AfaI GTAC 2 cut(s) 416, 889
AgsI TTSAA 5 cut(s) 181, 358, 560, 620, 737
AhlI ACTAGT 1 cut(s) 61
AjiI CACGTC 1 cut(s) 949
AjnI CCWGG 4 cut(s) 28, 106, 293, 593
AluBI AGCT 7 cut(s) 460, 707, 764, 777, 818, 844, 1157
AluI AGCT 7 cut(s) 460, 707, 764, 777, 818, 844, 1157
Alw21I GWGCWC 1 cut(s) 667
Alw26I GTCTC 3 cut(s) 329, 438, 713
Alw44I GTGCAC 1 cut(s) 663
AlwI GGATC 1 cut(s) 416
AoxI GGCC 1 cut(s) 31
ApaLI GTGCAC 1 cut(s) 663
ApeKI GCWGC 6 cut(s) 704, 818, 844, 975, 1154, 1245
ApoI RAATTY 3 cut(s) 419, 796, 869
Asp700I GAANNNNTTC 2 cut(s) 63, 423
AsuHPI GGTGA 2 cut(s) 509, 797
AxyI CCTNAGG 1 cut(s) 1224
BaeGI GKGCMC 1 cut(s) 667
BalI TGGCCA 1 cut(s) 33
BanI GGYRCC 1 cut(s) 17
BbsI GAAGAC 1 cut(s) 180
Bbv12I GWGCWC 1 cut(s) 667
BbvI GCAGC 6 cut(s) 716, 805, 831, 987, 1166, 1257
BccI CCATC 4 cut(s) 658, 688, 1099, 1112
BciT130I CCWGG 4 cut(s) 30, 108, 295, 595
BcoDI GTCTC 3 cut(s) 329, 438, 713
BcuI ACTAGT 1 cut(s) 61
BfaI CTAG 2 cut(s) 62, 875
BfmI CTRYAG 1 cut(s) 845
BisI GCNGC 7 cut(s) 705, 819, 845, 976, 1014, 1155, 1246
BlsI GCNGC 7 cut(s) 706, 820, 846, 977, 1015, 1156, 1247
BmcAI AGTACT 1 cut(s) 889
Bme1390I CCNGG 4 cut(s) 30, 108, 295, 595
BmgBI CACGTC 1 cut(s) 949
BmiI GGNNCC 2 cut(s) 19, 292
BmrFI CCNGG 4 cut(s) 30, 108, 295, 595
BmsI GCATC 3 cut(s) 559, 685, 979
BpiI GAAGAC 1 cut(s) 180
BpmI CTGGAG 2 cut(s) 316, 577
Bpu10I CCTNAGC 1 cut(s) 1134
BpuEI CTTGAG 2 cut(s) 62, 223
Bsa29I ATCGAT 1 cut(s) 1212
BsaBI GATNNNNATC 1 cut(s) 1185
BsaJI CCNNGG 4 cut(s) 48, 158, 594, 1050
Bse1I ACTGG 2 cut(s) 320, 343
Bse21I CCTNAGG 1 cut(s) 1224
Bse3DI GCAATG 1 cut(s) 1090
Bse8I GATNNNNATC 1 cut(s) 1185
BseBI CCWGG 4 cut(s) 30, 108, 295, 595
BseCI ATCGAT 1 cut(s) 1212
BseDI CCNNGG 4 cut(s) 48, 158, 594, 1050
BseGI GGATG 3 cut(s) 650, 1001, 1123
BseJI GATNNNNATC 1 cut(s) 1185
BseMI GCAATG 1 cut(s) 1090
BseMII CTCAG 3 cut(s) 454, 1125, 1215
BseNI ACTGG 2 cut(s) 320, 343
BseRI GAGGAG 3 cut(s) 313, 806, 1113
BseSI GKGCMC 1 cut(s) 667
BseXI GCAGC 6 cut(s) 716, 805, 831, 987, 1166, 1257
BsgI GTGCAG 2 cut(s) 413, 630
BshFI GGCC 1 cut(s) 33
BshNI GGYRCC 1 cut(s) 17
BshVI ATCGAT 1 cut(s) 1212
BsiHKAI GWGCWC 1 cut(s) 667
BsiSI CCGG 1 cut(s) 274
BsmAI GTCTC 3 cut(s) 329, 438, 713
BsmI GAATGC 2 cut(s) 698, 734
BsnI GGCC 1 cut(s) 33
Bsp1286I GDGCHC 1 cut(s) 667
Bsp143I GATC 5 cut(s) 408, 430, 513, 856, 1186
Bsp19I CCATGG 1 cut(s) 48
BspACI CCGC 3 cut(s) 911, 1013, 1253
BspANI GGCC 1 cut(s) 33
BspCNI CTCAG 3 cut(s) 453, 1126, 1216
BspDI ATCGAT 1 cut(s) 1212
BspHI TCATGA 1 cut(s) 985
BspLI GGNNCC 2 cut(s) 19, 292
BspMAI CTGCAG 1 cut(s) 849
BspPI GGATC 1 cut(s) 416
BspT107I GGYRCC 1 cut(s) 17
BsrDI GCAATG 1 cut(s) 1090
BsrI ACTGG 2 cut(s) 320, 343
BssECI CCNNGG 4 cut(s) 48, 158, 594, 1050
BssMI GATC 5 cut(s) 408, 430, 513, 856, 1186
BssT1I CCWWGG 2 cut(s) 48, 158
Bst2UI CCWGG 4 cut(s) 30, 108, 295, 595
Bst4CI ACNGT 2 cut(s) 146, 401
Bst6I CTCTTC 4 cut(s) 74, 518, 534, 603
BstC8I GCNNGC 2 cut(s) 317, 1130
BstDEI CTNAG 4 cut(s) 440, 1134, 1224, 1266
BstDSI CCRYGG 1 cut(s) 48
BstF5I GGATG 3 cut(s) 650, 1001, 1123
BstKTI GATC 5 cut(s) 411, 433, 516, 859, 1189
BstMAI GTCTC 3 cut(s) 329, 438, 713
BstMBI GATC 5 cut(s) 408, 430, 513, 856, 1186
BstMWI GCNNNNNNNGC 1 cut(s) 704
BstNI CCWGG 4 cut(s) 30, 108, 295, 595
BstNSI RCATGY 2 cut(s) 576, 1132
BstSCI CCNGG 4 cut(s) 28, 106, 293, 593
BstSFI CTRYAG 1 cut(s) 845
BstSLI GKGCMC 1 cut(s) 667
BstV1I GCAGC 6 cut(s) 716, 805, 831, 987, 1166, 1257
BstV2I GAAGAC 1 cut(s) 180
BstX2I RGATCY 1 cut(s) 408
BstXI CCANNNNNNTGG 1 cut(s) 29
BstYI RGATCY 1 cut(s) 408
Bsu15I ATCGAT 1 cut(s) 1212
Bsu36I CCTNAGG 1 cut(s) 1224
BsuRI GGCC 1 cut(s) 33
BsuTUI ATCGAT 1 cut(s) 1212
BtgI CCRYGG 1 cut(s) 48
BtrI CACGTC 1 cut(s) 949
BtsCI GGATG 3 cut(s) 650, 1001, 1123
BtsI GCAGTG 1 cut(s) 1029
BtsIMutI CAGTG 1 cut(s) 1029
Cac8I GCNNGC 2 cut(s) 317, 1130
CciI TCATGA 1 cut(s) 985
ClaI ATCGAT 1 cut(s) 1212
Csp6I GTAC 2 cut(s) 415, 888
CspCI CAANNNNNGTGG 2 cut(s) 183, 218
CviAII CATG 7 cut(s) 49, 85, 573, 827, 986, 1006, 1129
CviQI GTAC 2 cut(s) 415, 888
DdeI CTNAG 4 cut(s) 440, 1134, 1224, 1266
DpnI GATC 5 cut(s) 410, 432, 515, 858, 1188
DpnII GATC 5 cut(s) 408, 430, 513, 856, 1186
EaeI YGGCCR 1 cut(s) 31
Eam1104I CTCTTC 4 cut(s) 74, 518, 534, 603
EarI CTCTTC 4 cut(s) 74, 518, 534, 603
EciI GGCGGA 1 cut(s) 926
Eco130I CCWWGG 2 cut(s) 48, 158
Eco57I CTGAAG 2 cut(s) 786, 912
Eco81I CCTNAGG 1 cut(s) 1224
EcoRI GAATTC 2 cut(s) 419, 869
EcoRII CCWGG 4 cut(s) 28, 106, 293, 593
EcoT14I CCWWGG 2 cut(s) 48, 158
EcoT22I ATGCAT 2 cut(s) 574, 700
ErhI CCWWGG 2 cut(s) 48, 158
FaeI CATG 7 cut(s) 52, 88, 576, 830, 989, 1009, 1132
FalI AAGNNNNNCTT 4 cut(s) 355, 387, 600, 632
FatI CATG 7 cut(s) 48, 84, 572, 826, 985, 1005, 1128
FblI GTMKAC 2 cut(s) 384, 481
Fnu4HI GCNGC 7 cut(s) 705, 819, 845, 976, 1014, 1155, 1246
FokI GGATG 3 cut(s) 637, 988, 1130
Fsp4HI GCNGC 7 cut(s) 705, 819, 845, 976, 1014, 1155, 1246
FspBI CTAG 2 cut(s) 62, 875
GluI GCNGC 7 cut(s) 705, 819, 845, 976, 1014, 1155, 1246
GsuI CTGGAG 2 cut(s) 316, 577
HaeIII GGCC 1 cut(s) 33
HapII CCGG 1 cut(s) 274
Hin1II CATG 7 cut(s) 52, 88, 576, 830, 989, 1009, 1132
HinfI GANTC 2 cut(s) 386, 831
HpaII CCGG 1 cut(s) 274
HphI GGTGA 2 cut(s) 509, 797
Hpy166II GTNNAC 5 cut(s) 385, 482, 500, 665, 970
Hpy188I TCNGA 3 cut(s) 443, 1054, 1195
Hpy188III TCNNGA 5 cut(s) 181, 428, 557, 986, 1223
Hpy8I GTNNAC 5 cut(s) 385, 482, 500, 665, 970
Hpy99I CGWCG 1 cut(s) 308
HpyAV CCTTC 1 cut(s) 992
HpyCH4III ACNGT 2 cut(s) 146, 401
HpyCH4IV ACGT 6 cut(s) 102, 381, 471, 535, 948, 963
HpyF10VI GCNNNNNNNGC 1 cut(s) 704
HpyF3I CTNAG 4 cut(s) 440, 1134, 1224, 1266
HpySE526I ACGT 6 cut(s) 102, 381, 471, 535, 948, 963
Hsp92II CATG 7 cut(s) 52, 88, 576, 830, 989, 1009, 1132
Kzo9I GATC 5 cut(s) 408, 430, 513, 856, 1186
LmnI GCTCC 3 cut(s) 300, 601, 997
Lsp1109I GCAGC 6 cut(s) 716, 805, 831, 987, 1166, 1257
LweI GCATC 3 cut(s) 559, 685, 979
MaeI CTAG 2 cut(s) 62, 875
MaeII ACGT 6 cut(s) 102, 381, 471, 535, 948, 963
MaeIII GTNAC 1 cut(s) 435
MalI GATC 5 cut(s) 410, 432, 515, 858, 1188
MboI GATC 5 cut(s) 408, 430, 513, 856, 1186
MfeI CAATTG 1 cut(s) 1256
MflI RGATCY 1 cut(s) 408
MhlI GDGCHC 1 cut(s) 667
MlsI TGGCCA 1 cut(s) 33
MluCI AATT 4 cut(s) 419, 796, 869, 1256
MluNI TGGCCA 1 cut(s) 33
MlyI GAGTC 1 cut(s) 380
MmeI TCCRAC 2 cut(s) 262, 386
Mox20I TGGCCA 1 cut(s) 33
Mph1103I ATGCAT 2 cut(s) 574, 700
MroXI GAANNNNTTC 2 cut(s) 63, 423
MscI TGGCCA 1 cut(s) 33
MseI TTAA 1 cut(s) 837
MslI CAYNNNNRTG 1 cut(s) 727
Msp20I TGGCCA 1 cut(s) 33
MspA1I CMGCKG 3 cut(s) 707, 844, 1157
MspI CCGG 1 cut(s) 274
MspR9I CCNGG 4 cut(s) 30, 108, 295, 595
MunI CAATTG 1 cut(s) 1256
Mva1269I GAATGC 2 cut(s) 698, 734
MvaI CCWGG 4 cut(s) 30, 108, 295, 595
MwoI GCNNNNNNNGC 1 cut(s) 704
NcoI CCATGG 1 cut(s) 48
NdeII GATC 5 cut(s) 408, 430, 513, 856, 1186
NlaIII CATG 7 cut(s) 52, 88, 576, 830, 989, 1009, 1132
NlaIV GGNNCC 2 cut(s) 19, 292
NmuCI GTSAC 1 cut(s) 435
NsiI ATGCAT 2 cut(s) 574, 700
NspI RCATGY 2 cut(s) 576, 1132
PaeI GCATGC 1 cut(s) 1132
PagI TCATGA 1 cut(s) 985
PctI GAATGC 2 cut(s) 698, 734
PdmI GAANNNNTTC 2 cut(s) 63, 423
PfeI GAWTC 1 cut(s) 831
PkrI GCNGC 7 cut(s) 706, 820, 846, 977, 1015, 1156, 1247
PleI GAGTC 1 cut(s) 380
PpsI GAGTC 1 cut(s) 380
Psp6I CCWGG 4 cut(s) 28, 106, 293, 593
PspGI CCWGG 4 cut(s) 28, 106, 293, 593
PspN4I GGNNCC 2 cut(s) 19, 292
PstI CTGCAG 1 cut(s) 849
PsuI RGATCY 1 cut(s) 408
PvuII CAGCTG 3 cut(s) 707, 844, 1157
RsaI GTAC 2 cut(s) 416, 889
RsaNI GTAC 2 cut(s) 415, 888
RseI CAYNNNNRTG 1 cut(s) 727
SaqAI TTAA 1 cut(s) 837
SatI GCNGC 7 cut(s) 705, 819, 845, 976, 1014, 1155, 1246
Sau3AI GATC 5 cut(s) 408, 430, 513, 856, 1186
ScaI AGTACT 1 cut(s) 889
SchI GAGTC 1 cut(s) 380
ScrFI CCNGG 4 cut(s) 30, 108, 295, 595
SduI GDGCHC 1 cut(s) 667
SfaNI GCATC 3 cut(s) 559, 685, 979
SfcI CTRYAG 1 cut(s) 845
SmiMI CAYNNNNRTG 1 cut(s) 727
SmlI CTYRAG 2 cut(s) 77, 202
SmoI CTYRAG 2 cut(s) 77, 202
SpeI ACTAGT 1 cut(s) 61
SphI GCATGC 1 cut(s) 1132
Sse9I AATT 4 cut(s) 419, 796, 869, 1256
SsiI CCGC 3 cut(s) 911, 1013, 1253
SspMI CTAG 2 cut(s) 62, 875
StyD4I CCNGG 4 cut(s) 28, 106, 293, 593
StyI CCWWGG 2 cut(s) 48, 158
TaaI ACNGT 2 cut(s) 146, 401
TaiI ACGT 6 cut(s) 105, 384, 474, 538, 951, 966
TaqI TCGA 3 cut(s) 129, 781, 1212
TaqII GACCGA 1 cut(s) 423
TasI AATT 4 cut(s) 419, 796, 869, 1256
TatI WGTACW 1 cut(s) 887
TauI GCSGC 1 cut(s) 1016
TfiI GAWTC 1 cut(s) 831
Tru1I TTAA 1 cut(s) 837
Tru9I TTAA 1 cut(s) 837
TscAI CASTG 1 cut(s) 1036
TseFI GTSAC 1 cut(s) 435
TseI GCWGC 6 cut(s) 704, 818, 844, 975, 1154, 1245
Tsp45I GTSAC 1 cut(s) 435
TspDTI ATGAA 2 cut(s) 72, 974
TspGWI ACGGA 1 cut(s) 599
TspRI CASTG 1 cut(s) 1036
VneI GTGCAC 1 cut(s) 663
XapI RAATTY 3 cut(s) 419, 796, 869
XceI RCATGY 2 cut(s) 576, 1132
XmiI GTMKAC 2 cut(s) 384, 481
XmnI GAANNNNTTC 2 cut(s) 63, 423
XspI CTAG 2 cut(s) 62, 875
ZrmI AGTACT 1 cut(s) 889
Zsp2I ATGCAT 2 cut(s) 574, 700
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.